Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0007082

Physical Location & Seq

Genomic Coordinates Reverse (-)

76517993 .. 76523320

Gene Structure 5328 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG535100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGCCGGGTAGGGGGGGTAGGGGTGGTCGGGTGAATTTTTCATCTCGTCCACCACATGATGCCGGTGGTGGCAGGAACTCAGGTCCTGGAACTGAGAATGGACCCGCTCAGGTTGCAGAGAAAGGTGTTGCTCCCTCTTTGCCAACCACTCGTGAGACAAAAACTAAAGAGAGAAGTCTGGTAACAAGCTCTGTACCTGTGATTGTGGGTGGTCCTTCCAATGTGGCTTCGGGAACTACTACTGTTGTGCCTGCCTCACAGTTATCTACTGGAACTAGTGCTGAAATAAGTTTGTCATTGGTTGGGGATAAATCGGGTAGCTCGGTCTCTGCAGTGGATGCAAAAAAAATCCCCACCAGTGCATTCGGAAATGAGGACTTGCACGAGCAGGCTGCACCAAGCTCCAGTAGTAGCTCAGTTTTGCCAAACCCAGCGTCTACATTGGGAGCATGCTTTTCCCCCTCTGATCCTGTACTGGTGCCGTCTAATGATTCACGGCTCCCAGGTTCTGTGGGCACAATCAAACGTGAAGTTGTGAGCCATCATCCTCCTGCTTCTGAGGTTGGCAGCTCTTTAGCACAAGGAAAAACAACAAGCAAAACACAGGGAGTTGGGAAAACTCAGCCCTCTGATTTTTCACATCCTTCATCTACATCAACTCATGGCGGTTCGGTTAGTCGGCCATCATCTAATTATAGTAGCCGGTCGCAACAACTAATTGGCACTCAAAAAGTTGGTACCAACAAGGAGTGGAAACCAAAGCCCATAGTTTCTGCTGTTGTTCAAGGTCAAGCAACAGCTAATGTAGCTGCACCTGAGGTGCCTGCTGATTTGGTAGAGGTCTCTCCGCAGTCACAACCTGTTTCAATTGTCCTTGATTCGGAAGAAGCAACTTCAAAACTGCAGAAGAAGCTAGAGGAATTACACCTTCCACAGCTTCCACAGCGCAAATTAGTTATTCTTCCAAATCACATACACGTTCCTGAGTCTGAACGAAACAAGTTGAGTTTTGGAAGCTTTGGGGCAACTTTTGGTGTAACGAATAGCTATGTCAGTGGTCCTGAGAGTGAGAAGAGCTCTACCCCTCGGTCTGAAACTTCTCAGGTTATTGAAGAATCTGTGGAGGAACAGTCCTCAAGCAATCAAAATGTGTTGGCAACTGCTGATGAGGGTGATTTTCCTGATCATTCGCAATCACCTACTCATATGCTTGAAAATCTATCATCTGTTGAGGGTGATGTCTCATCCAGTGCAGCCCAAGGACATAATGAATCTAAGCATGACACTGTACTGACTTCTGGAGGTCATCAGCTCCCAGTGGCTAATACTTCTCCGAATTATAGTTTTGGTATTGTACCTCCAATTTTAGGGAGTCAGCTTGCGGCATTTGAAAACTCTGAATCTCAAGCACGTGATATATCTCGGCTTCCAAGCTTTGTAGTACAACAACCCCTTGACCCAGCAAGTTATTATGCCCAATTTTACCGCTCCGGTGCTGATAGTGATGGCCGTCTTTCTCCTTTTCCATCTCCTGGGGTATCAACAAAGTACAATGGCAATGTTGGAGTATTGCCTCCAAGTTCTCAGTCTCCACAAGAGGGTGGGGTTCTTTCAGCAGCAGGTCCAACACCATTGGTGACACAGGCTTCTGGGCTTGTGCAAAGCTCAATAGCTGTAACTCAGCAGCCAGTTCCTGTCTTCCGACCGCCAGCTGGGGTGCACATTCCTCATTATGCTAACTACATTCCTTACAGTCACTACTTTAACCCATTCTATGTTCCGCCTCCTATCCACCAATATTTGGGTAATGGAGCATTTCCTCAACAACCTCAAGCAGGTGGTGTGTATCCAGCTCCACCAGCAGCTGCTGCCACAGGAGTCAAATACTCACTGCCACAATACAAAGCAGGGACTAATACAGGAAACTCAAATCACATGGGAATGGCAAGTGGATATGGGCCCTATGGCTCTTCCCCAGCTGGTTATAATCCCAGTCCTGCCACGACTGCAGGAAACACTACTCCCAATGAAGATCTTAGCACATCTCAGTTCAAGGAGAGTAATGTATACATCACCGGACAGCAGAGTGAAGGTTCGTCTGTATGGGTTGCTGCACCTAACCGAGAAATGCCCAGCTTAACAAGTTCATTTTACAACCTTCCTCCACAGGGTCAGCATGTGACTTTCACTCCAACGCAGGCTGGCCATGGTTTCTACCACCCTGCACAAGCAGTATCAGCTGCAGCTGTCCATCCACTTCTGCAACAGTCCCAAACCATGGCTGGGGCAGTTGACATGGTGGGACCTGGGGGAAGTGTTTATCAGCAGCCTCAGCATGCACAACAAATCAACTGGCCGAGCAACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

789

Amino Acids

82.01

Weight (kDa)

6.11

Isoelectric Point (pI)

62.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55820 AT3G13222
fragaria_vesca	FvH4_6g40450 FvH4_6g40450 FvH4_6g40450 FvH4_6g40450 FvH4_6g40450
prunus_persica	Prupe.3G193000_v2.0.a1 Prupe.3G193000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0155681
rosa_laevigata	RLG00000020854
rosa_multiflora	Rmu_co8254459.1_g000001 Rmu_co8366137.1_g000001 Rmu_sc0014073.1_g000001 Rmu_sc0042011.1_g000001 Rmu_ssc0000223.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093560
rosa_rugosa	Rorug02G0449100 Rorug02G0449200 Rorug02G0449300
rosa_samantha	Rh2AG515200 Rh2BG526300 Rh2CG500100 Rh2DG535100
rosa_wichuraiana	Rw2G042340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1986
AarI	CACCTGC	1 cut(s)	1826
Acc36I	ACCTGC	2 cut(s)	1610, 1826
Acc65I	GGTACC	1 cut(s)	737
AccB1I	GGYRCC	3 cut(s)	478, 737, 820
AccB7I	CCANNNNNTGG	3 cut(s)	1532, 1801, 2278
AccBSI	CCGCTC	2 cut(s)	107, 1488
AccI	GTMKAC	2 cut(s)	437, 2067
AciI	CCGC	7 cut(s)	105, 666, 848, 1382, 1486, 1706, 1781
AclWI	GGATC	1 cut(s)	461
AcoI	YGGCCR	4 cut(s)	680, 1507, 2203, 2354
AcsI	RAATTY	1 cut(s)	34
AcvI	CACGTG	1 cut(s)	1412
AfaI	GTAC	7 cut(s)	195, 474, 739, 1290, 1356, 1443, 1550
AflIII	ACRYGT	1 cut(s)	976
AgsI	TTSAA	7 cut(s)	785, 867, 897, 1112, 1214, 1391, 2053
AhlI	ACTAGT	1 cut(s)	275
AjnI	CCWGG	4 cut(s)	85, 502, 1531, 2305
Alw21I	GWGCWC	2 cut(s)	1079, 1722
Alw26I	GTCTC	5 cut(s)	149, 331, 847, 1246, 1593
Alw44I	GTGCAC	1 cut(s)	1718
AlwI	GGATC	1 cut(s)	461
AlwNI	CAGNNNCTG	5 cut(s)	86, 509, 1694, 1865, 1868
AoxI	GGCC	5 cut(s)	680, 1507, 1958, 2203, 2354
ApaI	GGGCCC	1 cut(s)	1962
ApaLI	GTGCAC	1 cut(s)	1718
ApoI	RAATTY	1 cut(s)	34
ArsI	GACNNNNNNTTYG	2 cut(s)	419, 451
Asp718I	GGTACC	1 cut(s)	737
AspLEI	GCGC	1 cut(s)	948
AspS9I	GGNCC	8 cut(s)	83, 101, 212, 1058, 1622, 1958, 1959, 2303
AsuC2I	CCSGG	1 cut(s)	6
AsuHPI	GGTGA	6 cut(s)	43, 1184, 1188, 1247, 1648, 2065
AvaII	GGWCC	6 cut(s)	83, 101, 212, 1058, 1622, 2303
AxyI	CCTNAGG	1 cut(s)	816
BaeGI	GKGCMC	3 cut(s)	518, 1722, 1962
BalI	TGGCCA	1 cut(s)	2205
BanI	GGYRCC	3 cut(s)	478, 737, 820
BanII	GRGCYC	2 cut(s)	1079, 1962
BauI	CACGAG	2 cut(s)	150, 383
BbrPI	CACGTG	1 cut(s)	1412
BbsI	GAAGAC	1 cut(s)	1690
Bbv12I	GWGCWC	2 cut(s)	1079, 1722
BbvCI	CCTCAGC	1 cut(s)	2331
BccI	CCATC	5 cut(s)	549, 691, 1499, 1534, 2259
BceAI	ACGGC	3 cut(s)	466, 512, 1494
BcgI	CGANNNNNNTGC	2 cut(s)	374, 408
BciT130I	CCWGG	4 cut(s)	87, 504, 1533, 2307
BciVI	GTATCC	1 cut(s)	1857
BclI	TGATCA	1 cut(s)	1183
BcnI	CCSGG	1 cut(s)	6
BcoDI	GTCTC	5 cut(s)	149, 331, 847, 1246, 1593
BcuI	ACTAGT	1 cut(s)	275
BfaI	CTAG	2 cut(s)	276, 914
BfmI	CTRYAG	4 cut(s)	330, 902, 2007, 2241
BfuAI	ACCTGC	2 cut(s)	1610, 1826
BfuI	GTATCC	1 cut(s)	1857
BglII	AGATCT	1 cut(s)	2032
Bme1390I	CCNGG	5 cut(s)	6, 87, 504, 1533, 2307
Bme18I	GGWCC	6 cut(s)	83, 101, 212, 1058, 1622, 2303
BmgT120I	GGNCC	8 cut(s)	83, 101, 212, 1058, 1622, 1958, 1959, 2303
BmiI	GGNNCC	7 cut(s)	103, 480, 500, 739, 822, 1960, 2304
BmrFI	CCNGG	5 cut(s)	6, 87, 504, 1533, 2307
BmrI	ACTGGG	2 cut(s)	1310, 1986
BmsI	GCATC	2 cut(s)	49, 328
BmuI	ACTGGG	2 cut(s)	1310, 1986
BpiI	GAAGAC	1 cut(s)	1690
BplI	GAGNNNNNCTC	2 cut(s)	1061, 1093
BpmI	CTGGAG	2 cut(s)	388, 1320
Bpu10I	CCTNAGC	2 cut(s)	108, 2331
BpuEI	CTTGAG	3 cut(s)	1120, 1389, 1815
BpuMI	CCSGG	1 cut(s)	6
BsaAI	YACGTR	1 cut(s)	1412
BsaI	GGTCTC	2 cut(s)	331, 847
BsaJI	CCNNGG	7 cut(s)	502, 1085, 1258, 1532, 2206, 2277, 2306
BsaWI	WCCGGW	2 cut(s)	1490, 2075
BsaXI	ACNNNNNCTCC	4 cut(s)	1115, 1145, 2173, 2203
Bse118I	RCCGGY	2 cut(s)	62, 702
Bse1I	ACTGG	9 cut(s)	274, 357, 405, 480, 1248, 1316, 1688, 1992, 2357
Bse21I	CCTNAGG	1 cut(s)	816
Bse3DI	GCAATG	1 cut(s)	1564
BseBI	CCWGG	4 cut(s)	87, 504, 1533, 2307
BseDI	CCNNGG	7 cut(s)	502, 1085, 1258, 1532, 2206, 2277, 2306
BseGI	GGATG	5 cut(s)	343, 544, 640, 1244, 2251
BseMI	GCAATG	1 cut(s)	1564
BseNI	ACTGG	9 cut(s)	274, 357, 405, 480, 1248, 1316, 1688, 1992, 2357
BseSI	GKGCMC	3 cut(s)	518, 1722, 1962
BseYI	CCCAGC	6 cut(s)	430, 1459, 1712, 1975, 2132, 2282
BsgI	GTGCAG	5 cut(s)	378, 795, 1272, 2097, 2208
Bsh1285I	CGRYCG	2 cut(s)	707, 1706
BshFI	GGCC	5 cut(s)	682, 1509, 1960, 2205, 2356
BshNI	GGYRCC	3 cut(s)	478, 737, 820
BsiEI	CGRYCG	2 cut(s)	707, 1706
BsiHKAI	GWGCWC	2 cut(s)	1079, 1722
BsiSI	CCGG	5 cut(s)	5, 63, 703, 1491, 2076
BslFI	GGGAC	3 cut(s)	1924, 2254, 2316
BsmAI	GTCTC	5 cut(s)	149, 331, 847, 1246, 1593
BsmFI	GGGAC	3 cut(s)	1924, 2254, 2316
BsmI	GAATGC	1 cut(s)	362
BsnI	GGCC	5 cut(s)	682, 1509, 1960, 2205, 2356
Bso31I	GGTCTC	2 cut(s)	331, 847
Bsp120I	GGGCCC	1 cut(s)	1958
Bsp1286I	GDGCHC	4 cut(s)	518, 1079, 1722, 1962
Bsp143I	GATC	3 cut(s)	466, 1183, 2032
Bsp19I	CCATGG	2 cut(s)	2206, 2277
BspACI	CCGC	7 cut(s)	105, 666, 848, 1382, 1486, 1706, 1781
BspANI	GGCC	5 cut(s)	682, 1509, 1960, 2205, 2356
BspLI	GGNNCC	7 cut(s)	103, 480, 500, 739, 822, 1960, 2304
BspMAI	CTGCAG	4 cut(s)	334, 906, 2011, 2245
BspMI	ACCTGC	2 cut(s)	1610, 1826
BspPI	GGATC	1 cut(s)	461
BspQI	GCTCTTC	2 cut(s)	1067, 1975
BspT107I	GGYRCC	3 cut(s)	478, 737, 820
BspTNI	GGTCTC	2 cut(s)	331, 847
BsrBI	CCGCTC	2 cut(s)	107, 1488
BsrDI	GCAATG	1 cut(s)	1564
BsrFI	RCCGGY	2 cut(s)	62, 702
BsrI	ACTGG	9 cut(s)	274, 357, 405, 480, 1248, 1316, 1688, 1992, 2357
BssAI	RCCGGY	2 cut(s)	62, 702
BssECI	CCNNGG	7 cut(s)	502, 1085, 1258, 1532, 2206, 2277, 2306
BssMI	GATC	3 cut(s)	466, 1183, 2032
BssNAI	GTATAC	1 cut(s)	2068
BssSI	CACGAG	2 cut(s)	150, 383
BssT1I	CCWWGG	3 cut(s)	1258, 2206, 2277
Bst1107I	GTATAC	1 cut(s)	2068
Bst2BI	CACGAG	2 cut(s)	150, 383
Bst2UI	CCWGG	4 cut(s)	87, 504, 1533, 2307
Bst4CI	ACNGT	6 cut(s)	244, 261, 1131, 1288, 1754, 2268
Bst6I	CTCTTC	2 cut(s)	1067, 1975
BstAPI	GCANNNNNTGC	2 cut(s)	338, 1868
BstBAI	YACGTR	1 cut(s)	1412
BstC8I	GCNNGC	9 cut(s)	252, 390, 451, 825, 1380, 1710, 2199, 2203, 2337
BstDSI	CCRYGG	2 cut(s)	2206, 2277
BstENI	CCTNNNNNAGG	1 cut(s)	1833
BstF5I	GGATG	5 cut(s)	343, 544, 640, 1244, 2251
BstHHI	GCGC	1 cut(s)	948
BstKTI	GATC	3 cut(s)	469, 1186, 2035
BstMAI	GTCTC	5 cut(s)	149, 331, 847, 1246, 1593
BstMBI	GATC	3 cut(s)	466, 1183, 2032
BstMCI	CGRYCG	2 cut(s)	707, 1706
BstNI	CCWGG	4 cut(s)	87, 504, 1533, 2307
BstNSI	RCATGY	3 cut(s)	453, 2180, 2339
BstSCI	CCNGG	5 cut(s)	4, 85, 502, 1531, 2305
BstSFI	CTRYAG	4 cut(s)	330, 902, 2007, 2241
BstSLI	GKGCMC	3 cut(s)	518, 1722, 1962
BstV2I	GAAGAC	1 cut(s)	1690
BstX2I	RGATCY	1 cut(s)	2032
BstYI	RGATCY	1 cut(s)	2032
BstZ17I	GTATAC	1 cut(s)	2068
Bsu36I	CCTNAGG	1 cut(s)	816
BsuI	GTATCC	1 cut(s)	1857
BsuRI	GGCC	5 cut(s)	682, 1509, 1960, 2205, 2356
BtgI	CCRYGG	2 cut(s)	2206, 2277
BtsCI	GGATG	5 cut(s)	343, 544, 640, 1244, 2251
BtsI	GCAGTG	2 cut(s)	339, 1889
BtsIMutI	CAGTG	7 cut(s)	339, 364, 1060, 1255, 1284, 1323, 1889
BveI	ACCTGC	2 cut(s)	1610, 1826
Cac8I	GCNNGC	9 cut(s)	252, 390, 451, 825, 1380, 1710, 2199, 2203, 2337
CaiI	CAGNNNCTG	5 cut(s)	86, 509, 1694, 1865, 1868
CfoI	GCGC	1 cut(s)	948
Cfr10I	RCCGGY	2 cut(s)	62, 702
Cfr13I	GGNCC	8 cut(s)	83, 101, 212, 1058, 1622, 1958, 1959, 2303
CseI	GACGC	1 cut(s)	423
Csp6I	GTAC	7 cut(s)	194, 473, 738, 1289, 1355, 1442, 1549
CviQI	GTAC	7 cut(s)	194, 473, 738, 1289, 1355, 1442, 1549
DpnI	GATC	3 cut(s)	468, 1185, 2034
DpnII	GATC	3 cut(s)	466, 1183, 2032
EaeI	YGGCCR	4 cut(s)	680, 1507, 2203, 2354
Eam1104I	CTCTTC	2 cut(s)	1067, 1975
EarI	CTCTTC	2 cut(s)	1067, 1975
EciI	GGCGGA	1 cut(s)	1770
Ecl136II	GAGCTC	1 cut(s)	1077
Eco130I	CCWWGG	3 cut(s)	1258, 2206, 2277
Eco24I	GRGCYC	2 cut(s)	1079, 1962
Eco31I	GGTCTC	2 cut(s)	331, 847
Eco47I	GGWCC	6 cut(s)	83, 101, 212, 1058, 1622, 2303
Eco53kI	GAGCTC	1 cut(s)	1077
Eco72I	CACGTG	1 cut(s)	1412
Eco81I	CCTNAGG	1 cut(s)	816
EcoICRI	GAGCTC	1 cut(s)	1077
EcoNI	CCTNNNNNAGG	1 cut(s)	1833
EcoO109I	RGGNCCY	3 cut(s)	83, 1959, 2303
EcoRII	CCWGG	4 cut(s)	85, 502, 1531, 2305
EcoT14I	CCWWGG	3 cut(s)	1258, 2206, 2277
EcoT38I	GRGCYC	2 cut(s)	1079, 1962
ErhI	CCWWGG	3 cut(s)	1258, 2206, 2277
FaqI	GGGAC	3 cut(s)	1924, 2254, 2316
FauI	CCCGC	1 cut(s)	112
FauNDI	CATATG	1 cut(s)	1206
FbaI	TGATCA	1 cut(s)	1183
FblI	GTMKAC	2 cut(s)	437, 2067
FokI	GGATG	5 cut(s)	350, 531, 627, 1231, 2238
FriOI	GRGCYC	2 cut(s)	1079, 1962
FspBI	CTAG	2 cut(s)	276, 914
GlaI	GCGC	1 cut(s)	947
GsaI	CCCAGC	6 cut(s)	434, 1463, 1716, 1979, 2136, 2286
GsuI	CTGGAG	2 cut(s)	388, 1320
HaeIII	GGCC	5 cut(s)	682, 1509, 1960, 2205, 2356
HapII	CCGG	5 cut(s)	5, 63, 703, 1491, 2076
HgaI	GACGC	1 cut(s)	423
HhaI	GCGC	1 cut(s)	948
Hin6I	GCGC	1 cut(s)	946
HinP1I	GCGC	1 cut(s)	946
HincII	GTYRAC	1 cut(s)	2293
HindII	GTYRAC	1 cut(s)	2293
HindIII	AAGCTT	2 cut(s)	1015, 1432
HinfI	GANTC	8 cut(s)	491, 878, 986, 1115, 1271, 1372, 1400, 1878
HpaII	CCGG	5 cut(s)	5, 63, 703, 1491, 2076
HphI	GGTGA	6 cut(s)	43, 1184, 1188, 1247, 1648, 2065
Hpy166II	GTNNAC	5 cut(s)	50, 438, 1720, 2068, 2293
Hpy188III	TCNNGA	6 cut(s)	152, 231, 983, 1061, 1181, 1299
Hpy8I	GTNNAC	5 cut(s)	50, 438, 1720, 2068, 2293
HpyAV	CCTTC	5 cut(s)	225, 654, 938, 2084, 2168
HpyCH4III	ACNGT	6 cut(s)	244, 261, 1131, 1288, 1754, 2268
HpyCH4IV	ACGT	3 cut(s)	526, 978, 1411
HpySE526I	ACGT	3 cut(s)	526, 978, 1411
HspAI	GCGC	1 cut(s)	946
KpnI	GGTACC	1 cut(s)	741
Ksp22I	TGATCA	1 cut(s)	1183
Kzo9I	GATC	3 cut(s)	466, 1183, 2032
LguI	GCTCTTC	2 cut(s)	1067, 1975
LmnI	GCTCC	8 cut(s)	136, 407, 446, 504, 1317, 1493, 1811, 1858
LweI	GCATC	2 cut(s)	49, 328
MaeI	CTAG	2 cut(s)	276, 914
MaeII	ACGT	3 cut(s)	526, 978, 1411
MaeIII	GTNAC	7 cut(s)	181, 852, 1036, 1636, 1675, 1754, 2179
MalI	GATC	3 cut(s)	468, 1185, 2034
MbiI	CCGCTC	2 cut(s)	107, 1488
MboI	GATC	3 cut(s)	466, 1183, 2032
MboII	GAAGA	8 cut(s)	896, 919, 953, 1084, 1124, 1690, 1962, 2042
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	1 cut(s)	2032
MhlI	GDGCHC	4 cut(s)	518, 1079, 1722, 1962
MlsI	TGGCCA	1 cut(s)	2205
MluCI	AATT	9 cut(s)	34, 691, 717, 867, 920, 950, 1336, 1362, 1478
MluNI	TGGCCA	1 cut(s)	2205
MlyI	GAGTC	3 cut(s)	995, 1381, 1887
MmeI	TCCRAC	4 cut(s)	1543, 1649, 1726, 2216
Mox20I	TGGCCA	1 cut(s)	2205
MscI	TGGCCA	1 cut(s)	2205
MseI	TTAA	2 cut(s)	1764, 2138
MslI	CAYNNNNRTG	1 cut(s)	1940
Msp20I	TGGCCA	1 cut(s)	2205
MspA1I	CMGCKG	5 cut(s)	1712, 1865, 1979, 2240, 2246
MspI	CCGG	5 cut(s)	5, 63, 703, 1491, 2076
MspR9I	CCNGG	5 cut(s)	6, 87, 504, 1533, 2307
MunI	CAATTG	1 cut(s)	867
Mva1269I	GAATGC	1 cut(s)	362
MvaI	CCWGG	4 cut(s)	87, 504, 1533, 2307
NciI	CCSGG	1 cut(s)	6
NcoI	CCATGG	2 cut(s)	2206, 2277
NdeI	CATATG	1 cut(s)	1206
NdeII	GATC	3 cut(s)	466, 1183, 2032
NlaIV	GGNNCC	7 cut(s)	103, 480, 500, 739, 822, 1960, 2304
NmeAIII	GCCGAG	1 cut(s)	1402
NmuCI	GTSAC	4 cut(s)	852, 1636, 1754, 2179
NspI	RCATGY	3 cut(s)	453, 2180, 2339
PaeI	GCATGC	2 cut(s)	453, 2339
PaqCI	CACCTGC	1 cut(s)	1826
PciSI	GCTCTTC	2 cut(s)	1067, 1975
PctI	GAATGC	1 cut(s)	362
PfeI	GAWTC	5 cut(s)	491, 878, 1115, 1271, 1400
PflMI	CCANNNNNTGG	3 cut(s)	1532, 1801, 2278
PfoI	TCCNGGA	1 cut(s)	85
PleI	GAGTC	3 cut(s)	994, 1380, 1886
PmaCI	CACGTG	1 cut(s)	1412
PmlI	CACGTG	1 cut(s)	1412
PpsI	GAGTC	3 cut(s)	994, 1380, 1886
Ppu21I	YACGTR	1 cut(s)	1412
PpuMI	RGGWCCY	2 cut(s)	83, 2303
PsiI	TTATAA	1 cut(s)	1986
Psp124BI	GAGCTC	1 cut(s)	1079
Psp5II	RGGWCCY	2 cut(s)	83, 2303
Psp6I	CCWGG	4 cut(s)	85, 502, 1531, 2305
PspCI	CACGTG	1 cut(s)	1412
PspFI	CCCAGC	6 cut(s)	430, 1459, 1712, 1975, 2132, 2282
PspGI	CCWGG	4 cut(s)	85, 502, 1531, 2305
PspN4I	GGNNCC	7 cut(s)	103, 480, 500, 739, 822, 1960, 2304
PspOMI	GGGCCC	1 cut(s)	1958
PspPI	GGNCC	8 cut(s)	83, 101, 212, 1058, 1622, 1958, 1959, 2303
PspPPI	RGGWCCY	2 cut(s)	83, 2303
PstI	CTGCAG	4 cut(s)	334, 906, 2011, 2245
PstNI	CAGNNNCTG	5 cut(s)	86, 509, 1694, 1865, 1868
PsuI	RGATCY	1 cut(s)	2032
PvuII	CAGCTG	5 cut(s)	1712, 1865, 1979, 2240, 2246
RsaI	GTAC	7 cut(s)	195, 474, 739, 1290, 1356, 1443, 1550
RsaNI	GTAC	7 cut(s)	194, 473, 738, 1289, 1355, 1442, 1549
RseI	CAYNNNNRTG	1 cut(s)	1940
SacI	GAGCTC	1 cut(s)	1079
SapI	GCTCTTC	2 cut(s)	1067, 1975
SaqAI	TTAA	2 cut(s)	1764, 2138
Sau3AI	GATC	3 cut(s)	466, 1183, 2032
Sau96I	GGNCC	8 cut(s)	83, 101, 212, 1058, 1622, 1958, 1959, 2303
SchI	GAGTC	3 cut(s)	995, 1381, 1887
ScrFI	CCNGG	5 cut(s)	6, 87, 504, 1533, 2307
SduI	GDGCHC	4 cut(s)	518, 1079, 1722, 1962
SfaNI	GCATC	2 cut(s)	49, 328
SfcI	CTRYAG	4 cut(s)	330, 902, 2007, 2241
SinI	GGWCC	6 cut(s)	83, 101, 212, 1058, 1622, 2303
SmiMI	CAYNNNNRTG	1 cut(s)	1940
SmlI	CTYRAG	3 cut(s)	1135, 1404, 1830
SmoI	CTYRAG	3 cut(s)	1135, 1404, 1830
SpeI	ACTAGT	1 cut(s)	275
SphI	GCATGC	2 cut(s)	453, 2339
Sse9I	AATT	9 cut(s)	34, 691, 717, 867, 920, 950, 1336, 1362, 1478
SsiI	CCGC	7 cut(s)	105, 666, 848, 1382, 1486, 1706, 1781
SspI	AATATT	1 cut(s)	1799
SspMI	CTAG	2 cut(s)	276, 914
SstI	GAGCTC	1 cut(s)	1079
StyD4I	CCNGG	5 cut(s)	4, 85, 502, 1531, 2305
StyI	CCWWGG	3 cut(s)	1258, 2206, 2277
TaaI	ACNGT	6 cut(s)	244, 261, 1131, 1288, 1754, 2268
TaiI	ACGT	3 cut(s)	529, 981, 1414
TaqII	GACCGA	2 cut(s)	313, 1077
TasI	AATT	9 cut(s)	34, 691, 717, 867, 920, 950, 1336, 1362, 1478
TatI	WGTACW	4 cut(s)	472, 1288, 1441, 1548
TauI	GCSGC	1 cut(s)	1385
TfiI	GAWTC	5 cut(s)	491, 878, 1115, 1271, 1400
Tru1I	TTAA	2 cut(s)	1764, 2138
Tru9I	TTAA	2 cut(s)	1764, 2138
TscAI	CASTG	7 cut(s)	339, 364, 1060, 1255, 1291, 1323, 1896
TseFI	GTSAC	4 cut(s)	852, 1636, 1754, 2179
Tsp45I	GTSAC	4 cut(s)	852, 1636, 1754, 2179
TspDTI	ATGAA	5 cut(s)	30, 636, 1284, 2043, 2136
TspRI	CASTG	7 cut(s)	339, 364, 1060, 1255, 1291, 1323, 1896
Van91I	CCANNNNNTGG	3 cut(s)	1532, 1801, 2278
VneI	GTGCAC	1 cut(s)	1718
VpaK11BI	GGWCC	6 cut(s)	83, 101, 212, 1058, 1622, 2303
XagI	CCTNNNNNAGG	1 cut(s)	1833
XapI	RAATTY	1 cut(s)	34
XceI	RCATGY	3 cut(s)	453, 2180, 2339
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2279
XmiI	GTMKAC	2 cut(s)	437, 2067
XspI	CTAG	2 cut(s)	276, 914

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.