RLG00000021451

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
75559944 .. 75561780
1837 bp
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UTR
Exon/CDS
Intron
RLM00000021451

Sequence Viewer

Length: 537 bp
ATGGATTTCCTTCTGCATCAGAAAGCTACACAGAACTTCACAACCATTTGGGGACAAGGAGCTTTTGGTCCAGTCTATAAAGCAACAATGCCTGCTGGAAAGGTAGTAGCGCTGAAGGTGCTTGCTTCAAATTCCAAGCAGGGTGAGAAAGAGTTCCAGACAGAGGTATCTCTGTTAGGAAGACTGCATCATCGAAATCTAATGTACCTCAGAGGTTACTGTGTAGATAAAGAGCAGTGGACAGGTTTCACATCCCAACTTTATGAACTATTCACCTGTTTACTTGCACAAGGAGTGGATAATGGAACAGTGGGACAAGAATTACTATATCACTTCACTTGCTGGCGCAGGCCATGGCAGTGCCCTGGTGGTAAATGTCCCAAGGTAGCAGATGGGGCATTGATGTCCAGAAATGCAGTTTATTCTAATCAGGTTGTTGAGATTGATTTCCCATATCCAAGCGAAGGCATCCATAAAAGATGGGAGAATGGATATCGCATTTACCTCAACTGCTGCGACAGAGGATTAAGTAATTGA

Protein Analysis

179

Amino Acids

20.25

Weight (kDa)

8.66

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 17 - 79 8.6e-09 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 17 - 79 1.7e-07 Protein kinase domain
DUF7477 PF24289 132 - 168 1.7e-14 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 130
AcuI CTGAAG 1 cut(s) 134
AfaI GTAC 1 cut(s) 206
AfeI AGCGCT 1 cut(s) 111
AfiI CCNNNNNNNGG 2 cut(s) 163, 464
AgsI TTSAA 1 cut(s) 129
AjnI CCWGG 1 cut(s) 364
AluBI AGCT 2 cut(s) 26, 62
AluI AGCT 2 cut(s) 26, 62
Aor51HI AGCGCT 1 cut(s) 111
AoxI GGCC 1 cut(s) 350
ApeKI GCWGC 1 cut(s) 513
ApoI RAATTY 1 cut(s) 130
Asp700I GAANNNNTTC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 112, 348
AspS9I GGNCC 1 cut(s) 68
AsuHPI GGTGA 2 cut(s) 155, 265
AvaII GGWCC 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 365
BaeI ACNNNNGTAYC 2 cut(s) 150, 183
BbsI GAAGAC 1 cut(s) 187
BbvI GCAGC 1 cut(s) 500
BccI CCATC 2 cut(s) 386, 474
BciT130I CCWGG 1 cut(s) 366
BfoI RGCGCY 1 cut(s) 113
BisI GCNGC 1 cut(s) 514
BlsI GCNGC 1 cut(s) 515
Bme1390I CCNGG 1 cut(s) 366
Bme18I GGWCC 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 68
BmrFI CCNGG 1 cut(s) 366
BmsI GCATC 3 cut(s) 25, 196, 477
BpiI GAAGAC 1 cut(s) 187
BsaJI CCNNGG 3 cut(s) 353, 364, 381
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 464
Bse1I ACTGG 1 cut(s) 71
BseBI CCWGG 1 cut(s) 366
BseDI CCNNGG 3 cut(s) 353, 364, 381
BseGI GGATG 2 cut(s) 251, 468
BseLI CCNNNNNNNGG 2 cut(s) 163, 464
BseMII CTCAG 1 cut(s) 223
BseNI ACTGG 1 cut(s) 71
BseSI GKGCMC 1 cut(s) 365
BseXI GCAGC 1 cut(s) 500
BshFI GGCC 1 cut(s) 352
BslFI GGGAC 3 cut(s) 66, 327, 363
BslI CCNNNNNNNGG 2 cut(s) 163, 464
BsmFI GGGAC 3 cut(s) 66, 327, 363
BsnI GGCC 1 cut(s) 352
Bsp1286I GDGCHC 1 cut(s) 365
Bsp19I CCATGG 1 cut(s) 353
BspANI GGCC 1 cut(s) 352
BspCNI CTCAG 1 cut(s) 222
BsrI ACTGG 1 cut(s) 71
BssECI CCNNGG 3 cut(s) 353, 364, 381
BssT1I CCWWGG 2 cut(s) 353, 381
Bst2UI CCWGG 1 cut(s) 366
Bst4CI ACNGT 2 cut(s) 221, 310
BstC8I GCNNGC 4 cut(s) 93, 123, 344, 350
BstDEI CTNAG 1 cut(s) 209
BstDSI CCRYGG 1 cut(s) 353
BstF5I GGATG 2 cut(s) 251, 468
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 2 cut(s) 112, 348
BstMWI GCNNNNNNNGC 2 cut(s) 118, 395
BstNI CCWGG 1 cut(s) 366
BstSCI CCNGG 1 cut(s) 364
BstSLI GKGCMC 1 cut(s) 365
BstV1I GCAGC 1 cut(s) 500
BstV2I GAAGAC 1 cut(s) 187
BsuRI GGCC 1 cut(s) 352
BtgI CCRYGG 1 cut(s) 353
BtsCI GGATG 2 cut(s) 251, 468
BtsI GCAGTG 2 cut(s) 242, 365
BtsIMutI CAGTG 3 cut(s) 242, 315, 365
Cac8I GCNNGC 4 cut(s) 93, 123, 344, 350
CfoI GCGC 2 cut(s) 112, 348
Cfr13I GGNCC 1 cut(s) 68
Csp6I GTAC 1 cut(s) 205
CviAII CATG 1 cut(s) 354
CviJI RGCY 3 cut(s) 26, 62, 352
CviKI_1 RGCY 3 cut(s) 26, 62, 352
CviQI GTAC 1 cut(s) 205
DdeI CTNAG 1 cut(s) 209
Eco130I CCWWGG 2 cut(s) 353, 381
Eco32I GATATC 1 cut(s) 494
Eco47I GGWCC 1 cut(s) 68
Eco47III AGCGCT 1 cut(s) 111
Eco57I CTGAAG 1 cut(s) 134
EcoRII CCWGG 1 cut(s) 364
EcoRV GATATC 1 cut(s) 494
EcoT14I CCWWGG 2 cut(s) 353, 381
ErhI CCWWGG 2 cut(s) 353, 381
FaeI CATG 1 cut(s) 357
FaiI YATR 6 cut(s) 78, 264, 328, 355, 454, 474
FaqI GGGAC 3 cut(s) 66, 327, 363
FatI CATG 1 cut(s) 353
Fnu4HI GCNGC 1 cut(s) 514
FokI GGATG 2 cut(s) 238, 455
Fsp4HI GCNGC 1 cut(s) 514
GlaI GCGC 2 cut(s) 111, 347
GluI GCNGC 1 cut(s) 514
HaeII RGCGCY 1 cut(s) 113
HaeIII GGCC 1 cut(s) 352
HhaI GCGC 2 cut(s) 112, 348
Hin1II CATG 1 cut(s) 357
Hin6I GCGC 2 cut(s) 110, 346
HinP1I GCGC 2 cut(s) 110, 346
HphI GGTGA 2 cut(s) 155, 265
Hpy166II GTNNAC 2 cut(s) 240, 281
Hpy188I TCNGA 2 cut(s) 21, 212
Hpy188III TCNNGA 2 cut(s) 157, 408
Hpy8I GTNNAC 2 cut(s) 240, 281
HpyAV CCTTC 3 cut(s) 20, 109, 458
HpyCH4III ACNGT 2 cut(s) 221, 310
HpyCH4V TGCA 4 cut(s) 16, 187, 287, 416
HpyF10VI GCNNNNNNNGC 2 cut(s) 118, 395
HpyF3I CTNAG 1 cut(s) 209
Hsp92II CATG 1 cut(s) 357
HspAI GCGC 2 cut(s) 110, 346
LmnI GCTCC 1 cut(s) 59
Lsp1109I GCAGC 1 cut(s) 500
LweI GCATC 3 cut(s) 25, 196, 477
MaeIII GTNAC 1 cut(s) 215
MboII GAAGA 1 cut(s) 192
MhlI GDGCHC 1 cut(s) 365
MluCI AATT 3 cut(s) 130, 320, 532
MnlI CCTC 5 cut(s) 157, 206, 218, 515, 515
MroXI GAANNNNTTC 1 cut(s) 152
MseI TTAA 1 cut(s) 527
MslI CAYNNNNRTG 1 cut(s) 358
MspR9I CCNGG 1 cut(s) 366
MvaI CCWGG 1 cut(s) 366
MwoI GCNNNNNNNGC 2 cut(s) 118, 395
NcoI CCATGG 1 cut(s) 353
NlaIII CATG 1 cut(s) 357
PdmI GAANNNNTTC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 515
Psp6I CCWGG 1 cut(s) 364
PspGI CCWGG 1 cut(s) 364
PspPI GGNCC 1 cut(s) 68
RsaI GTAC 1 cut(s) 206
RsaNI GTAC 1 cut(s) 205
RseI CAYNNNNRTG 1 cut(s) 358
SaqAI TTAA 1 cut(s) 527
SatI GCNGC 1 cut(s) 514
Sau96I GGNCC 1 cut(s) 68
ScrFI CCNGG 1 cut(s) 366
SduI GDGCHC 1 cut(s) 365
SfaNI GCATC 3 cut(s) 25, 196, 477
SinI GGWCC 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 358
Sse9I AATT 3 cut(s) 130, 320, 532
StyD4I CCNGG 1 cut(s) 364
StyI CCWWGG 2 cut(s) 353, 381
TaaI ACNGT 2 cut(s) 221, 310
TaqI TCGA 1 cut(s) 193
TasI AATT 3 cut(s) 130, 320, 532
Tru1I TTAA 1 cut(s) 527
Tru9I TTAA 1 cut(s) 527
TscAI CASTG 3 cut(s) 242, 315, 365
TseI GCWGC 1 cut(s) 513
TspDTI ATGAA 1 cut(s) 279
TspRI CASTG 3 cut(s) 242, 315, 365
VpaK11BI GGWCC 1 cut(s) 68
XapI RAATTY 1 cut(s) 130
XmnI GAANNNNTTC 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.