Rh2DG596300

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0015232
Physical Location & Seq
Forward (+)
82909777 .. 82911553
1777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG596300.1

Sequence Viewer

Length: 630 bp
ATGGATTTCCTTCTGCATCAGAAAGCTACACAGAACTTCACAACCATTTGGGGACAAGGGGCTTTTGGTCCAGTCTATAAAGCAACAATGCCTGCTGGAAAGGTAGTAGCGCTGAAGGTGCTTGCTTCAAATTCCCGGCAGGGAGAGAAAGAGTTCCAGACAGAGGTATCTGTGTTAGGAAGACTGCATCATCGAAATCTAGTGAACCTCATAGGTTACTGTGGACAGGTTTCACATCCCAACTTTATGAACTATTCACCTGTTTACTTGCAGGAGGAGTGGATAATGGAACAGTGGGACAAGAACTACCATATCACTTCACTTGCTGGCGCAGGCAATGGCAGTGCCCTGGTGGTAATGTCCAAAGGCCTACCATATACTCAGCAGTTGTACAAAGTCAGTGATATATTCCCTTTCAAATGGAATAATAAGAAATGGAAAGAAGGTTTCTCTGTTACCTCCATGACTACTGCAGGTAGCAGATGGGGCATTGTCATGTCCAGAAATGCAGGTTATTCTAATCAGGTTGTTGAGATTGATTTCCCATATCCAAGCGAAGGCATCCATAAAAGATGGGAGAATGGATATCGCATTTACCTCAACTGCTGCGACAGAGGATTAAGTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0007154 GO:0007165 GO:0007166 GO:0007267 GO:0007346 GO:0008150 GO:0008152 GO:0008360 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010564 GO:0010604 GO:0015630 GO:0016055 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019222 GO:0019538 GO:0022603 GO:0022604 GO:0023052 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032879 GO:0032886 GO:0033043 GO:0035567 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051493 GO:0051716 GO:0051726 GO:0060069 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0070507 GO:0071704 GO:0080090 GO:0098657 GO:0140096 GO:0198738 GO:1901564 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1905114 GO:2000058 GO:2000060
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

209

Amino Acids

23.74

Weight (kDa)

9.18

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 17 - 76 2.1e-09 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 17 - 79 1e-08 Protein kinase domain
DUF7477 PF24289 65 - 199 4.5e-65 Domain of unknown function (DUF7477)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 464, 500
AcsI RAATTY 1 cut(s) 130
AcuI CTGAAG 1 cut(s) 134
AfaI GTAC 1 cut(s) 392
AfeI AGCGCT 1 cut(s) 111
AfiI CCNNNNNNNGG 2 cut(s) 163, 557
AgsI TTSAA 2 cut(s) 129, 418
AjnI CCWGG 1 cut(s) 348
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
Aor51HI AGCGCT 1 cut(s) 111
AoxI GGCC 1 cut(s) 367
ApeKI GCWGC 1 cut(s) 606
ApoI RAATTY 1 cut(s) 130
Asp700I GAANNNNTTC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 112, 332
AspS9I GGNCC 1 cut(s) 68
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 1 cut(s) 249
AvaII GGWCC 1 cut(s) 68
BaeGI GKGCMC 1 cut(s) 349
BaeI ACNNNNGTAYC 2 cut(s) 150, 183
BbsI GAAGAC 1 cut(s) 187
BbvI GCAGC 1 cut(s) 593
BccI CCATC 2 cut(s) 477, 567
BciT130I CCWGG 1 cut(s) 350
BcnI CCSGG 1 cut(s) 136
BfaI CTAG 1 cut(s) 200
BfmI CTRYAG 1 cut(s) 471
BfoI RGCGCY 1 cut(s) 113
BfuAI ACCTGC 2 cut(s) 464, 500
BisI GCNGC 1 cut(s) 607
BlsI GCNGC 1 cut(s) 608
Bme1390I CCNGG 2 cut(s) 136, 350
Bme18I GGWCC 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 68
BmrFI CCNGG 2 cut(s) 136, 350
BmsI GCATC 3 cut(s) 25, 196, 570
BpiI GAAGAC 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 136
BsaJI CCNNGG 1 cut(s) 348
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 557
Bse1I ACTGG 1 cut(s) 71
Bse3DI GCAATG 1 cut(s) 343
BseBI CCWGG 1 cut(s) 350
BseDI CCNNGG 1 cut(s) 348
BseGI GGATG 2 cut(s) 235, 561
BseLI CCNNNNNNNGG 2 cut(s) 163, 557
BseMI GCAATG 1 cut(s) 343
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 71
BseRI GAGGAG 1 cut(s) 290
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 1 cut(s) 593
BshFI GGCC 1 cut(s) 369
BsiSI CCGG 1 cut(s) 136
BslFI GGGAC 2 cut(s) 66, 311
BslI CCNNNNNNNGG 2 cut(s) 163, 557
BsmFI GGGAC 2 cut(s) 66, 311
BsnI GGCC 1 cut(s) 369
Bsp1286I GDGCHC 1 cut(s) 349
Bsp1407I TGTACA 1 cut(s) 390
BspANI GGCC 1 cut(s) 369
BspCNI CTCAG 1 cut(s) 394
BspMAI CTGCAG 1 cut(s) 475
BspMI ACCTGC 2 cut(s) 464, 500
BsrDI GCAATG 1 cut(s) 343
BsrGI TGTACA 1 cut(s) 390
BsrI ACTGG 1 cut(s) 71
BssECI CCNNGG 1 cut(s) 348
Bst2UI CCWGG 1 cut(s) 350
Bst4CI ACNGT 2 cut(s) 221, 294
BstAUI TGTACA 1 cut(s) 390
BstC8I GCNNGC 4 cut(s) 93, 123, 328, 334
BstDEI CTNAG 1 cut(s) 381
BstF5I GGATG 2 cut(s) 235, 561
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 2 cut(s) 112, 332
BstMWI GCNNNNNNNGC 2 cut(s) 118, 486
BstNI CCWGG 1 cut(s) 350
BstSCI CCNGG 2 cut(s) 134, 348
BstSFI CTRYAG 1 cut(s) 471
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 1 cut(s) 593
BstV2I GAAGAC 1 cut(s) 187
BsuRI GGCC 1 cut(s) 369
BtsCI GGATG 2 cut(s) 235, 561
BtsI GCAGTG 1 cut(s) 349
BtsIMutI CAGTG 3 cut(s) 299, 349, 406
BveI ACCTGC 2 cut(s) 464, 500
Cac8I GCNNGC 4 cut(s) 93, 123, 328, 334
CfoI GCGC 2 cut(s) 112, 332
Cfr13I GGNCC 1 cut(s) 68
Csp6I GTAC 1 cut(s) 391
CviAII CATG 2 cut(s) 463, 496
CviJI RGCY 3 cut(s) 26, 62, 369
CviKI_1 RGCY 3 cut(s) 26, 62, 369
CviQI GTAC 1 cut(s) 391
DdeI CTNAG 1 cut(s) 381
Eco147I AGGCCT 1 cut(s) 369
Eco32I GATATC 1 cut(s) 587
Eco47I GGWCC 1 cut(s) 68
Eco47III AGCGCT 1 cut(s) 111
Eco57I CTGAAG 1 cut(s) 134
EcoRII CCWGG 1 cut(s) 348
EcoRV GATATC 1 cut(s) 587
FaeI CATG 2 cut(s) 466, 499
FaqI GGGAC 2 cut(s) 66, 311
FatI CATG 2 cut(s) 462, 495
Fnu4HI GCNGC 1 cut(s) 607
FokI GGATG 2 cut(s) 222, 548
Fsp4HI GCNGC 1 cut(s) 607
FspBI CTAG 1 cut(s) 200
GlaI GCGC 2 cut(s) 111, 331
GluI GCNGC 1 cut(s) 607
HaeII RGCGCY 1 cut(s) 113
HaeIII GGCC 1 cut(s) 369
HapII CCGG 1 cut(s) 136
HhaI GCGC 2 cut(s) 112, 332
Hin1II CATG 2 cut(s) 466, 499
Hin6I GCGC 2 cut(s) 110, 330
HinP1I GCGC 2 cut(s) 110, 330
HpaII CCGG 1 cut(s) 136
HphI GGTGA 1 cut(s) 249
Hpy166II GTNNAC 3 cut(s) 205, 224, 265
Hpy188I TCNGA 1 cut(s) 21
Hpy188III TCNNGA 2 cut(s) 157, 501
Hpy8I GTNNAC 3 cut(s) 205, 224, 265
HpyAV CCTTC 4 cut(s) 20, 109, 437, 551
HpyCH4III ACNGT 2 cut(s) 221, 294
HpyCH4V TGCA 5 cut(s) 16, 187, 271, 473, 509
HpyF10VI GCNNNNNNNGC 2 cut(s) 118, 486
HpyF3I CTNAG 1 cut(s) 381
Hsp92II CATG 2 cut(s) 466, 499
HspAI GCGC 2 cut(s) 110, 330
Lsp1109I GCAGC 1 cut(s) 593
LweI GCATC 3 cut(s) 25, 196, 570
MaeI CTAG 1 cut(s) 200
MaeIII GTNAC 2 cut(s) 215, 454
MboII GAAGA 1 cut(s) 192
MhlI GDGCHC 1 cut(s) 349
MluCI AATT 2 cut(s) 130, 625
MnlI CCTC 6 cut(s) 157, 218, 268, 469, 608, 608
MroXI GAANNNNTTC 1 cut(s) 152
MseI TTAA 1 cut(s) 620
MslI CAYNNNNRTG 1 cut(s) 494
MspI CCGG 1 cut(s) 136
MspR9I CCNGG 2 cut(s) 136, 350
MvaI CCWGG 1 cut(s) 350
MwoI GCNNNNNNNGC 2 cut(s) 118, 486
NciI CCSGG 1 cut(s) 136
NlaIII CATG 2 cut(s) 466, 499
PceI AGGCCT 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 608
Psp6I CCWGG 1 cut(s) 348
PspGI CCWGG 1 cut(s) 348
PspPI GGNCC 1 cut(s) 68
PstI CTGCAG 1 cut(s) 475
RsaI GTAC 1 cut(s) 392
RsaNI GTAC 1 cut(s) 391
RseI CAYNNNNRTG 1 cut(s) 494
SaqAI TTAA 1 cut(s) 620
SatI GCNGC 1 cut(s) 607
Sau96I GGNCC 1 cut(s) 68
ScrFI CCNGG 2 cut(s) 136, 350
SduI GDGCHC 1 cut(s) 349
SfaNI GCATC 3 cut(s) 25, 196, 570
SfcI CTRYAG 1 cut(s) 471
SinI GGWCC 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 494
Sse9I AATT 2 cut(s) 130, 625
SseBI AGGCCT 1 cut(s) 369
SspMI CTAG 1 cut(s) 200
StuI AGGCCT 1 cut(s) 369
StyD4I CCNGG 2 cut(s) 134, 348
TaaI ACNGT 2 cut(s) 221, 294
TaqI TCGA 1 cut(s) 193
TasI AATT 2 cut(s) 130, 625
TatI WGTACW 1 cut(s) 390
Tru1I TTAA 1 cut(s) 620
Tru9I TTAA 1 cut(s) 620
TscAI CASTG 3 cut(s) 299, 349, 406
TseI GCWGC 1 cut(s) 606
TspDTI ATGAA 1 cut(s) 263
TspRI CASTG 3 cut(s) 299, 349, 406
VpaK11BI GGWCC 1 cut(s) 68
XapI RAATTY 1 cut(s) 130
XmnI GAANNNNTTC 1 cut(s) 152
XspI CTAG 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.