RLG00000023233

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
20289651 .. 20291079
1429 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023233

Sequence Viewer

Length: 333 bp
ATGTCAGCGATTGAAAGGCTGAAAACCTCTAGTCGTTCTCGTGCTTTCTTTACAACTCAAAACAAAAAGGTAGTAGTGAAGAATCTATACCAGCCTCAAAACCCAAATGTAGATGAAGTTCTATCTGACAATATGGAAACCTCAAATGTGAGACCTGAAATTCCAAGTCAGCGTACTGGAGTCCCACCTGAGAACTTGGAGATGAATGTCAATGTGAACTTAAATTTGAATCTGAATGGGGGAAGTGATAATGTGATAAATGTTCCAATTGATCCTTTGCCATCTTTGACTGTCCAAGTCCCCACTATTAATGCTCCAGATGATAATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

111

Amino Acids

12.14

Weight (kDa)

4.76

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 266
AcsI RAATTY 2 cut(s) 159, 223
AfaI GTAC 1 cut(s) 175
AgsI TTSAA 2 cut(s) 14, 229
Alw26I GTCTC 1 cut(s) 145
AlwI GGATC 1 cut(s) 266
ApoI RAATTY 2 cut(s) 159, 223
AseI ATTAAT 1 cut(s) 309
BarI GAAGNNNNNNTAC 2 cut(s) 71, 103
BauI CACGAG 1 cut(s) 39
BccI CCATC 1 cut(s) 289
BcoDI GTCTC 1 cut(s) 145
BfaI CTAG 1 cut(s) 30
BpmI CTGGAG 2 cut(s) 198, 300
BsaI GGTCTC 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 181
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 181
BslFI GGGAC 2 cut(s) 167, 284
BsmAI GTCTC 1 cut(s) 145
BsmFI GGGAC 2 cut(s) 167, 284
Bso31I GGTCTC 1 cut(s) 145
Bsp143I GATC 1 cut(s) 271
BspCNI CTCAG 1 cut(s) 181
BspPI GGATC 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 145
BsrI ACTGG 1 cut(s) 181
BssMI GATC 1 cut(s) 271
BssSI CACGAG 1 cut(s) 39
Bst2BI CACGAG 1 cut(s) 39
Bst4CI ACNGT 1 cut(s) 292
BstDEI CTNAG 1 cut(s) 189
BstKTI GATC 1 cut(s) 274
BstMAI GTCTC 1 cut(s) 145
BstMBI GATC 1 cut(s) 271
Csp6I GTAC 1 cut(s) 174
CviJI RGCY 2 cut(s) 19, 94
CviKI_1 RGCY 2 cut(s) 19, 94
CviQI GTAC 1 cut(s) 174
DdeI CTNAG 1 cut(s) 189
DpnI GATC 1 cut(s) 273
DpnII GATC 1 cut(s) 271
Eco31I GGTCTC 1 cut(s) 145
FaiI YATR 2 cut(s) 88, 134
FaqI GGGAC 2 cut(s) 167, 284
FspBI CTAG 1 cut(s) 30
GsuI CTGGAG 2 cut(s) 198, 300
HinfI GANTC 3 cut(s) 82, 180, 229
Hpy166II GTNNAC 1 cut(s) 217
Hpy188I TCNGA 2 cut(s) 127, 234
Hpy188III TCNNGA 1 cut(s) 317
Hpy8I GTNNAC 1 cut(s) 217
HpyCH4III ACNGT 1 cut(s) 292
HpyF3I CTNAG 1 cut(s) 189
Kzo9I GATC 1 cut(s) 271
LmnI GCTCC 1 cut(s) 319
LpnPI CCDG 4 cut(s) 104, 162, 168, 201
MaeI CTAG 1 cut(s) 30
MalI GATC 1 cut(s) 273
MboI GATC 1 cut(s) 271
MboII GAAGA 1 cut(s) 91
MfeI CAATTG 1 cut(s) 267
MluCI AATT 4 cut(s) 159, 223, 267, 325
MlyI GAGTC 1 cut(s) 189
MnlI CCTC 3 cut(s) 37, 105, 151
MseI TTAA 2 cut(s) 221, 309
MunI CAATTG 1 cut(s) 267
NdeII GATC 1 cut(s) 271
PfeI GAWTC 2 cut(s) 82, 229
PleI GAGTC 1 cut(s) 188
PpsI GAGTC 1 cut(s) 188
PshBI ATTAAT 1 cut(s) 309
PsrI GAACNNNNNNTAC 2 cut(s) 102, 134
RsaI GTAC 1 cut(s) 175
RsaNI GTAC 1 cut(s) 174
SaqAI TTAA 2 cut(s) 221, 309
Sau3AI GATC 1 cut(s) 271
SchI GAGTC 1 cut(s) 189
SetI ASST 5 cut(s) 29, 72, 143, 157, 190
Sse9I AATT 4 cut(s) 159, 223, 267, 325
SspMI CTAG 1 cut(s) 30
TaaI ACNGT 1 cut(s) 292
TasI AATT 4 cut(s) 159, 223, 267, 325
TfiI GAWTC 2 cut(s) 82, 229
Tru1I TTAA 2 cut(s) 221, 309
Tru9I TTAA 2 cut(s) 221, 309
TspDTI ATGAA 2 cut(s) 129, 218
VspI ATTAAT 1 cut(s) 309
XapI RAATTY 2 cut(s) 159, 223
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.