Rh4CG072600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
13410972 .. 13413619
2648 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG072600.1

Sequence Viewer

Length: 300 bp
ATGGGCCATGTCTTTGATGATTTAGAAGATGGGCCAGAAGTAATGATGAATGAGCAGCAATCAGTAGTTCAGGATGGACCAATTCAAGTTGATGAGCTGCAACAAAGAAGGTTGGGGCTTGAAAATGTGGATTCTGTAATTGTTGGTATGCAACAAGTGGAGCTAAATGGGTCAACAGCCAAACAGAGGCCTAAAGATAAAGGGAAGCAAGAGATGGTTGTTGAAGAAAGTGAAGTTCCAAAGAAGAAGAAAGGCAGACCTAAGAAAGAGCTGAAAAGGAGCCCCAAAACCCAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

11.23

Weight (kDa)

5.87

Isoelectric Point (pI)

58.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 186
AgsI TTSAA 3 cut(s) 86, 122, 224
AluBI AGCT 3 cut(s) 97, 163, 271
AluI AGCT 3 cut(s) 97, 163, 271
AoxI GGCC 3 cut(s) 4, 32, 188
ApeKI GCWGC 2 cut(s) 55, 97
AspS9I GGNCC 3 cut(s) 4, 32, 77
AvaII GGWCC 1 cut(s) 77
BanII GRGCYC 1 cut(s) 284
BbvI GCAGC 2 cut(s) 67, 84
BccI CCATC 3 cut(s) 23, 68, 208
BisI GCNGC 2 cut(s) 56, 98
BlsI GCNGC 2 cut(s) 57, 99
Bme18I GGWCC 1 cut(s) 77
BmgT120I GGNCC 3 cut(s) 4, 32, 77
BmiI GGNNCC 1 cut(s) 281
Bsc4I CCNNNNNNNGG 1 cut(s) 186
BseGI GGATG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 186
BseXI GCAGC 2 cut(s) 67, 84
BshFI GGCC 3 cut(s) 6, 34, 190
BslI CCNNNNNNNGG 1 cut(s) 186
BsnI GGCC 3 cut(s) 6, 34, 190
Bsp1286I GDGCHC 1 cut(s) 284
BspANI GGCC 3 cut(s) 6, 34, 190
BspLI GGNNCC 1 cut(s) 281
BstDEI CTNAG 1 cut(s) 261
BstF5I GGATG 1 cut(s) 79
BstV1I GCAGC 2 cut(s) 67, 84
BsuRI GGCC 3 cut(s) 6, 34, 190
BtsCI GGATG 1 cut(s) 79
Cfr13I GGNCC 3 cut(s) 4, 32, 77
CviAII CATG 1 cut(s) 8
CviJI RGCY 9 cut(s) 6, 34, 97, 118, 163, 179, 190, 271, 282
CviKI_1 RGCY 9 cut(s) 6, 34, 97, 118, 163, 179, 190, 271, 282
DdeI CTNAG 1 cut(s) 261
Eco147I AGGCCT 1 cut(s) 190
Eco24I GRGCYC 1 cut(s) 284
Eco47I GGWCC 1 cut(s) 77
EcoT38I GRGCYC 1 cut(s) 284
FaeI CATG 1 cut(s) 11
FaiI YATR 2 cut(s) 9, 149
FatI CATG 1 cut(s) 7
Fnu4HI GCNGC 2 cut(s) 56, 98
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 1 cut(s) 284
Fsp4HI GCNGC 2 cut(s) 56, 98
GluI GCNGC 2 cut(s) 56, 98
HaeIII GGCC 3 cut(s) 6, 34, 190
Hin1II CATG 1 cut(s) 11
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 1 cut(s) 131
Hpy166II GTNNAC 1 cut(s) 174
Hpy188III TCNNGA 1 cut(s) 71
Hpy8I GTNNAC 1 cut(s) 174
HpyAV CCTTC 1 cut(s) 102
HpyCH4V TGCA 2 cut(s) 100, 151
HpyF3I CTNAG 1 cut(s) 261
Hsp92II CATG 1 cut(s) 11
LmnI GCTCC 2 cut(s) 160, 279
LpnPI CCDG 2 cut(s) 48, 56
Lsp1109I GCAGC 2 cut(s) 67, 84
MboII GAAGA 4 cut(s) 38, 236, 256, 259
MhlI GDGCHC 1 cut(s) 284
MluCI AATT 2 cut(s) 81, 138
MnlI CCTC 1 cut(s) 180
NlaIII CATG 1 cut(s) 11
NlaIV GGNNCC 1 cut(s) 281
PceI AGGCCT 1 cut(s) 190
PfeI GAWTC 1 cut(s) 131
PkrI GCNGC 2 cut(s) 57, 99
PspN4I GGNNCC 1 cut(s) 281
PspPI GGNCC 3 cut(s) 4, 32, 77
SatI GCNGC 2 cut(s) 56, 98
Sau96I GGNCC 3 cut(s) 4, 32, 77
SduI GDGCHC 1 cut(s) 284
SetI ASST 5 cut(s) 99, 113, 165, 262, 273
SgeI CNNG 7 cut(s) 20, 47, 83, 98, 131, 167, 221
SinI GGWCC 1 cut(s) 77
Sse9I AATT 2 cut(s) 81, 138
SseBI AGGCCT 1 cut(s) 190
StuI AGGCCT 1 cut(s) 190
TasI AATT 2 cut(s) 81, 138
TfiI GAWTC 1 cut(s) 131
TseI GCWGC 2 cut(s) 55, 97
TspDTI ATGAA 1 cut(s) 62
VpaK11BI GGWCC 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.