Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0014859

Physical Location & Seq

Genomic Coordinates Forward (+)

14084115 .. 14091550

Gene Structure 7436 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0086900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGGGATGAGCGGAATGGAACCGAGCGGCGGCGGCGAGGGACTGAAGAGGCGGGGGTGTTCGTGCGGAAAGAACGATTTTCTCCCGGAGGAGTCGTTCGAGAGCTGGGGCAATTACGCCAATGCGCTCCGGTCGACTCCGGCGAGGTTCAAGGACAGGTTCTTCACGCGGTCCTCCGACAGCACCGAGCTGGTGGAGGTGAAGGCGCAGAGCCAGCACGAGATGAAGAAGACGCTTGACTGGTGGGACCTCATCTGGTTCGGGCTCGGATCCGTCATCGGCGCCGGAATCTTCGTCCTCACTGGACTCGAGGCCAAGCAACACGCCGGACCCGCCGTCGTCATGTCCTACGTCGTCTCCGGCGTCTCCGCCTTGCTCTCTGTTTTCTGTTACACAGAGTTCGCCGTCGAGATTCCCGTTGCAGGCGGCTCATTTGCCTACCTAAGAGTGGAGCTTGGGGACTTCGTGGCCTACATTGCAGCAGGAAACATCCTTCTCGAATATGTCATAGGCGGGGCGGCCGTTGCGCGTTCGTGGACCTCATACTTCACCTCCCTATGCAACCAGGACGATTCCAATGCTTTCCGAATCACTGTCCACGGTTGGTCGGAGGACTACAAGTACCTGGACCCCATTGCCATTGGGGTTATCATCTTTATCTGCATACTCACCGTCTTGAGCACAAAGGGCTCCTCGCACCTCAACTACGTCGCCTCCATAGTCCACGTCATCGTCATTATCTTCATCATCATAGCAGGTCTCCTAGCAGGTCTCACCAAAGCAGATACTGACAACTACAAGGAGTTTGCCCCAAATGGTGCTCCGGGCATCTTCCAAGCCTCGGCAGTTCTCTTCTTTGCATACGTTGGATTTGACGCCGTTTCAACCATGGCCGAAGAGACCAAGAATCCTGCTCGAGACATCCCAATAGGGCTGGTTGGGTCCATGGTGATCACCACCACTCTTTATTGCTTGCTAGCCGTGACACTCTGCCTTATGGTACCATATCAGGAAATTGATGAGGACGCTCCATTTTCAAAAGCGTTTGAGACAGTTGGTATGGATTGGGCCAAGTATGTGGTTGCAGCTGGAGCTTTAAAAGGCATGACTAGTGTTTTGCTCGTCGGGGCTGTGGGTGAGGCCCGGTATTTGACCCACATTGCCCGAACCCACATGATGCCCCCATGGTTTGCTCAAGTTGATGCCAAGACAGGTACTCCAGTCAATGCCACAATTGTCATGCTCGCAGCCACAGCTGTAATCGCTTTCTTCACCAGCCTCGACATTCTTGCTAACCTTCTCTCCATTTCTACGCTATTCATCTTCAGCCTCGTTGCCATTGCTCTACTCGTACGCCGTTACTATGTAACCGGCGTGACCACGGATGCAAACAGGAATAAGCTCATACTGTGTATTGTTATGATACTCGGGGGTGCAATTGCCACTTCTGCTTACTGGGGTGTCAGCCATGATTGGGTAGGGTATTGCGTGACGGCTCCTATTTGGTTCTTGGGGACTTTGGGGATTTGGTTTCTTGTTCCGCAAGCAAGGAGTCCAAAGCTTTGGGGGGTGCCATTGGTTCCATGGTTGCCTTCACTTTCGATTGGCATCAACATTTTCTTGCTTGGTTCGATTGATGGTGCTTCTTTTGTCAGGTTTGCAGAATGGACTGTGATTATCTTGGTTTACTACATTTTCTTTGGGTTGCATGCTTCATATGACACAGCAAAGGACTCTGAAGCTAAGAGGCTCGAGGGTGGGGAAATACGAGACGAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBD_Tnp_Mut MULE SWIM

Protein Analysis

593

Amino Acids

64.33

Weight (kDa)

5.3

Isoelectric Point (pI)

33.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	79 - 486	1.9e-53	Amino acid permease
AA_permease	PF00324	84 - 453	1.4e-37	Amino acid permease
AA_permease_C	PF13906	522 - 572	1.1e-16	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014859)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr6g0303401
rosa_laevigata	RLG00000009556 RLG00000019103 RLG00000023233
rosa_multiflora	Rmu_sc0000211.1_g000002 Rmu_sc0000250.1_g000012
rosa_roxburghii	Rroxscaffold_3G00252420 Rroxscaffold_5G00341090
rosa_rugosa	Rorug01G0086700 Rorug01G0086900 Rorug03G0350800
rosa_samantha	Rh1AG415700 Rh3DG110600 Rh4BG066000 Rh4CG072600 Rh4DG062900 Rh4DG429700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	746, 758
Acc65I	GGTACC	1 cut(s)	1000
AccB1I	GGYRCC	3 cut(s)	281, 1000, 1570
AccBSI	CCGCTC	2 cut(s)	12, 27
AccI	GTMKAC	1 cut(s)	134
AccII	CGCG	2 cut(s)	169, 529
AclWI	GGATC	2 cut(s)	264, 277
AcoI	YGGCCR	2 cut(s)	519, 891
AcuI	CTGAAG	3 cut(s)	65, 1309, 1758
AcyI	GRCGYC	3 cut(s)	282, 363, 876
AfaI	GTAC	4 cut(s)	623, 1002, 1216, 1353
AfiI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
AgsI	TTSAA	3 cut(s)	151, 885, 1038
AhdI	GACNNNNNGTC	1 cut(s)	335
AhlI	ACTAGT	1 cut(s)	1109
AjiI	CACGTC	1 cut(s)	727
AjnI	CCWGG	2 cut(s)	564, 624
AloI	GAACNNNNNNTCC	2 cut(s)	80, 112
AluBI	AGCT	9 cut(s)	105, 190, 454, 1088, 1094, 1256, 1402, 1561, 1742
AluI	AGCT	9 cut(s)	105, 190, 454, 1088, 1094, 1256, 1402, 1561, 1742
Alw21I	GWGCWC	2 cut(s)	683, 823
Alw26I	GTCTC	8 cut(s)	361, 370, 764, 776, 893, 912, 1043, 1764
AlwI	GGATC	2 cut(s)	264, 277
AlwNI	CAGNNNCTG	1 cut(s)	788
Ama87I	CYCGRG	4 cut(s)	308, 915, 1427, 1751
AoxI	GGCC	6 cut(s)	312, 468, 519, 891, 1068, 1140
ApeKI	GCWGC	3 cut(s)	479, 1085, 1247
ArsI	GACNNNNNNTTYG	2 cut(s)	1099, 1131
Asp718I	GGTACC	1 cut(s)	1000
AspLEI	GCGC	4 cut(s)	127, 208, 284, 529
AspS9I	GGNCC	8 cut(s)	171, 247, 329, 537, 628, 942, 1068, 1141
AsuC2I	CCSGG	3 cut(s)	86, 825, 1144
AsuHPI	GGTGA	8 cut(s)	211, 541, 661, 766, 946, 961, 1148, 1264
AsuNHI	GCTAGC	1 cut(s)	976
AvaI	CYCGRG	4 cut(s)	308, 915, 1427, 1751
AvaII	GGWCC	6 cut(s)	171, 247, 329, 537, 628, 942
BaeI	ACNNNNGTAYC	2 cut(s)	1206, 1239
BamHI	GGATCC	1 cut(s)	269
BanI	GGYRCC	3 cut(s)	281, 1000, 1570
BanII	GRGCYC	2 cut(s)	267, 692
BauI	CACGAG	1 cut(s)	218
BbsI	GAAGAC	1 cut(s)	236
Bbv12I	GWGCWC	2 cut(s)	683, 823
BbvI	GCAGC	3 cut(s)	491, 1097, 1259
BccI	CCATC	1 cut(s)	1631
BceAI	ACGGC	7 cut(s)	320, 389, 506, 863, 965, 1341, 1509
BcgI	CGANNNNNNTGC	4 cut(s)	560, 594, 1271, 1305
BciT130I	CCWGG	2 cut(s)	566, 626
BclI	TGATCA	1 cut(s)	951
BcnI	CCSGG	3 cut(s)	86, 825, 1144
BcoDI	GTCTC	8 cut(s)	361, 370, 764, 776, 893, 912, 1043, 1764
BcuI	ACTAGT	1 cut(s)	1109
BfaI	CTAG	3 cut(s)	764, 977, 1110
BfoI	RGCGCY	1 cut(s)	285
BfuAI	ACCTGC	2 cut(s)	746, 758
BisI	GCNGC	8 cut(s)	28, 31, 34, 427, 480, 519, 1086, 1248
BlsI	GCNGC	8 cut(s)	29, 32, 35, 428, 481, 520, 1087, 1249
Bme1390I	CCNGG	5 cut(s)	86, 566, 626, 825, 1144
Bme18I	GGWCC	6 cut(s)	171, 247, 329, 537, 628, 942
BmeRI	GACNNNNNGTC	1 cut(s)	335
BmeT110I	CYCGRG	4 cut(s)	308, 915, 1427, 1751
BmgBI	CACGTC	1 cut(s)	727
BmgT120I	GGNCC	8 cut(s)	171, 247, 329, 537, 628, 942, 1068, 1141
BmrFI	CCNGG	5 cut(s)	86, 566, 626, 825, 1144
BmrI	ACTGGG	1 cut(s)	1465
BmsI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
BmtI	GCTAGC	1 cut(s)	980
BmuI	ACTGGG	1 cut(s)	1465
BpiI	GAAGAC	1 cut(s)	236
BpmI	CTGGAG	2 cut(s)	1110, 1203
BpuEI	CTTGAG	2 cut(s)	697, 1179
BpuMI	CCSGG	3 cut(s)	86, 825, 1144
BsaBI	GATNNNNATC	1 cut(s)	1607
BsaHI	GRCGYC	3 cut(s)	282, 363, 876
BsaI	GGTCTC	3 cut(s)	764, 776, 893
BsaJI	CCNNGG	7 cut(s)	598, 840, 888, 945, 1184, 1380, 1583
BsaWI	WCCGGW	1 cut(s)	129
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
Bse118I	RCCGGY	1 cut(s)	1370
Bse1I	ACTGG	4 cut(s)	245, 307, 1220, 1460
Bse3DI	GCAATG	4 cut(s)	474, 633, 1158, 1338
Bse8I	GATNNNNATC	1 cut(s)	1607
BseBI	CCWGG	2 cut(s)	566, 626
BseDI	CCNNGG	7 cut(s)	598, 840, 888, 945, 1184, 1380, 1583
BseGI	GGATG	4 cut(s)	12, 489, 921, 1390
BseJI	GATNNNNATC	1 cut(s)	1607
BseLI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
BseMI	GCAATG	4 cut(s)	474, 633, 1158, 1338
BseNI	ACTGG	4 cut(s)	245, 307, 1220, 1460
BseRI	GAGGAG	2 cut(s)	104, 682
BseX3I	CGGCCG	1 cut(s)	519
BseXI	GCAGC	3 cut(s)	491, 1097, 1259
BseYI	CCCAGC	1 cut(s)	105
Bsh1236I	CGCG	2 cut(s)	169, 529
Bsh1285I	CGRYCG	2 cut(s)	134, 522
BshFI	GGCC	6 cut(s)	314, 470, 521, 893, 1070, 1142
BshNI	GGYRCC	3 cut(s)	281, 1000, 1570
BsiEI	CGRYCG	2 cut(s)	134, 522
BsiHKAI	GWGCWC	2 cut(s)	683, 823
BsiHKCI	CYCGRG	4 cut(s)	308, 915, 1427, 1751
BsiSI	CCGG	9 cut(s)	86, 130, 140, 285, 327, 360, 824, 1144, 1371
BsiWI	CGTACG	1 cut(s)	1351
BslFI	GGGAC	4 cut(s)	54, 260, 473, 1528
BslI	CCNNNNNNNGG	5 cut(s)	29, 422, 448, 841, 1474
BsmAI	GTCTC	8 cut(s)	361, 370, 764, 776, 893, 912, 1043, 1764
BsmBI	CGTCTC	3 cut(s)	361, 370, 1764
BsmFI	GGGAC	4 cut(s)	54, 260, 473, 1528
BsnI	GGCC	6 cut(s)	314, 470, 521, 893, 1070, 1142
Bso31I	GGTCTC	3 cut(s)	764, 776, 893
BsoBI	CYCGRG	4 cut(s)	308, 915, 1427, 1751
Bsp1286I	GDGCHC	4 cut(s)	267, 683, 692, 823
Bsp143I	GATC	2 cut(s)	269, 951
Bsp19I	CCATGG	4 cut(s)	888, 945, 1184, 1583
BspANI	GGCC	6 cut(s)	314, 470, 521, 893, 1070, 1142
BspFNI	CGCG	2 cut(s)	169, 529
BspMI	ACCTGC	2 cut(s)	746, 758
BspOI	GCTAGC	1 cut(s)	980
BspPI	GGATC	2 cut(s)	264, 277
BspT107I	GGYRCC	3 cut(s)	281, 1000, 1570
BspTNI	GGTCTC	3 cut(s)	764, 776, 893
BsrBI	CCGCTC	2 cut(s)	12, 27
BsrDI	GCAATG	4 cut(s)	474, 633, 1158, 1338
BsrFI	RCCGGY	1 cut(s)	1370
BsrI	ACTGG	4 cut(s)	245, 307, 1220, 1460
BssAI	RCCGGY	1 cut(s)	1370
BssECI	CCNNGG	7 cut(s)	598, 840, 888, 945, 1184, 1380, 1583
BssMI	GATC	2 cut(s)	269, 951
BssNI	GRCGYC	3 cut(s)	282, 363, 876
BssSI	CACGAG	1 cut(s)	218
BssT1I	CCWWGG	4 cut(s)	888, 945, 1184, 1583
Bst2BI	CACGAG	1 cut(s)	218
Bst2UI	CCWGG	2 cut(s)	566, 626
Bst4CI	ACNGT	6 cut(s)	595, 602, 673, 1054, 1410, 1672
Bst6I	CTCTTC	3 cut(s)	41, 857, 891
BstACI	GRCGYC	3 cut(s)	282, 363, 876
BstC8I	GCNNGC	7 cut(s)	215, 424, 974, 978, 1245, 1545, 1710
BstDEI	CTNAG	2 cut(s)	443, 1743
BstDSI	CCRYGG	6 cut(s)	598, 888, 945, 1184, 1380, 1583
BstF5I	GGATG	4 cut(s)	12, 489, 921, 1390
BstFNI	CGCG	2 cut(s)	169, 529
BstH2I	RGCGCY	1 cut(s)	285
BstHHI	GCGC	4 cut(s)	127, 208, 284, 529
BstKTI	GATC	2 cut(s)	272, 954
BstMAI	GTCTC	8 cut(s)	361, 370, 764, 776, 893, 912, 1043, 1764
BstMBI	GATC	2 cut(s)	269, 951
BstMCI	CGRYCG	2 cut(s)	134, 522
BstNI	CCWGG	2 cut(s)	566, 626
BstNSI	RCATGY	1 cut(s)	1712
BstSCI	CCNGG	5 cut(s)	84, 564, 624, 823, 1142
BstUI	CGCG	2 cut(s)	169, 529
BstV1I	GCAGC	3 cut(s)	491, 1097, 1259
BstV2I	GAAGAC	1 cut(s)	236
BstX2I	RGATCY	1 cut(s)	269
BstXI	CCANNNNNNTGG	2 cut(s)	1078, 1563
BstYI	RGATCY	1 cut(s)	269
BstZI	CGGCCG	1 cut(s)	519
BsuRI	GGCC	6 cut(s)	314, 470, 521, 893, 1070, 1142
BtgI	CCRYGG	6 cut(s)	598, 888, 945, 1184, 1380, 1583
BtrI	CACGTC	1 cut(s)	727
BtsCI	GGATG	4 cut(s)	12, 489, 921, 1390
BtsIMutI	CAGTG	2 cut(s)	300, 591
BveI	ACCTGC	2 cut(s)	746, 758
Cac8I	GCNNGC	7 cut(s)	215, 424, 974, 978, 1245, 1545, 1710
CaiI	CAGNNNCTG	1 cut(s)	788
CfoI	GCGC	4 cut(s)	127, 208, 284, 529
Cfr10I	RCCGGY	1 cut(s)	1370
Cfr13I	GGNCC	8 cut(s)	171, 247, 329, 537, 628, 942, 1068, 1141
CseI	GACGC	4 cut(s)	241, 352, 884, 1034
Csp6I	GTAC	4 cut(s)	622, 1001, 1215, 1352
CviQI	GTAC	4 cut(s)	622, 1001, 1215, 1352
DdeI	CTNAG	2 cut(s)	443, 1743
DinI	GGCGCC	1 cut(s)	283
DpnI	GATC	2 cut(s)	271, 953
DpnII	GATC	2 cut(s)	269, 951
DraI	TTTAAA	1 cut(s)	1098
DriI	GACNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	2 cut(s)	519, 891
EagI	CGGCCG	1 cut(s)	519
Eam1104I	CTCTTC	3 cut(s)	41, 857, 891
Eam1105I	GACNNNNNGTC	1 cut(s)	335
EarI	CTCTTC	3 cut(s)	41, 857, 891
EciI	GGCGGA	1 cut(s)	358
EclXI	CGGCCG	1 cut(s)	519
Eco130I	CCWWGG	4 cut(s)	888, 945, 1184, 1583
Eco24I	GRGCYC	2 cut(s)	267, 692
Eco31I	GGTCTC	3 cut(s)	764, 776, 893
Eco47I	GGWCC	6 cut(s)	171, 247, 329, 537, 628, 942
Eco52I	CGGCCG	1 cut(s)	519
Eco57I	CTGAAG	3 cut(s)	65, 1309, 1758
Eco88I	CYCGRG	4 cut(s)	308, 915, 1427, 1751
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	564, 624
EcoT14I	CCWWGG	4 cut(s)	888, 945, 1184, 1583
EcoT38I	GRGCYC	2 cut(s)	267, 692
EgeI	GGCGCC	1 cut(s)	283
EheI	GGCGCC	1 cut(s)	283
ErhI	CCWWGG	4 cut(s)	888, 945, 1184, 1583
Esp3I	CGTCTC	3 cut(s)	361, 370, 1764
FaqI	GGGAC	4 cut(s)	54, 260, 473, 1528
FauI	CCCGC	3 cut(s)	45, 340, 506
FauNDI	CATATG	1 cut(s)	1717
FbaI	TGATCA	1 cut(s)	951
FblI	GTMKAC	1 cut(s)	134
Fnu4HI	GCNGC	8 cut(s)	28, 31, 34, 427, 480, 519, 1086, 1248
FokI	GGATG	4 cut(s)	19, 476, 908, 1397
FriOI	GRGCYC	2 cut(s)	267, 692
Fsp4HI	GCNGC	8 cut(s)	28, 31, 34, 427, 480, 519, 1086, 1248
FspBI	CTAG	3 cut(s)	764, 977, 1110
GlaI	GCGC	4 cut(s)	126, 207, 283, 528
GluI	GCNGC	8 cut(s)	28, 31, 34, 427, 480, 519, 1086, 1248
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	2 cut(s)	1110, 1203
HaeII	RGCGCY	1 cut(s)	285
HaeIII	GGCC	6 cut(s)	314, 470, 521, 893, 1070, 1142
HapII	CCGG	9 cut(s)	86, 130, 140, 285, 327, 360, 824, 1144, 1371
HgaI	GACGC	4 cut(s)	241, 352, 884, 1034
HhaI	GCGC	4 cut(s)	127, 208, 284, 529
Hin1I	GRCGYC	3 cut(s)	282, 363, 876
Hin6I	GCGC	4 cut(s)	125, 206, 282, 527
HinP1I	GCGC	4 cut(s)	125, 206, 282, 527
HincII	GTYRAC	1 cut(s)	135
HindII	GTYRAC	1 cut(s)	135
HindIII	AAGCTT	1 cut(s)	1559
HpaII	CCGG	9 cut(s)	86, 130, 140, 285, 327, 360, 824, 1144, 1371
HphI	GGTGA	8 cut(s)	211, 541, 661, 766, 946, 961, 1148, 1264
Hpy166II	GTNNAC	5 cut(s)	135, 537, 598, 724, 1687
Hpy188I	TCNGA	5 cut(s)	178, 269, 587, 610, 1738
Hpy188III	TCNNGA	6 cut(s)	100, 409, 497, 676, 917, 1010
Hpy8I	GTNNAC	5 cut(s)	135, 537, 598, 724, 1687
Hpy99I	CGWCG	5 cut(s)	341, 356, 410, 713, 1127
HpyAV	CCTTC	5 cut(s)	196, 503, 1307, 1602, 1769
HpyCH4III	ACNGT	6 cut(s)	595, 602, 673, 1054, 1410, 1672
HpyCH4IV	ACGT	4 cut(s)	351, 708, 726, 864
HpyF3I	CTNAG	2 cut(s)	443, 1743
HpySE526I	ACGT	4 cut(s)	351, 708, 726, 864
Hsp92I	GRCGYC	3 cut(s)	282, 363, 876
HspAI	GCGC	4 cut(s)	125, 206, 282, 527
KasI	GGCGCC	1 cut(s)	281
KpnI	GGTACC	1 cut(s)	1004
Ksp22I	TGATCA	1 cut(s)	951
Kzo9I	GATC	2 cut(s)	269, 951
LmnI	GCTCC	7 cut(s)	132, 451, 695, 826, 1033, 1091, 1501
Lsp1109I	GCAGC	3 cut(s)	491, 1097, 1259
LweI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
MaeI	CTAG	3 cut(s)	764, 977, 1110
MaeII	ACGT	4 cut(s)	351, 708, 726, 864
MaeIII	GTNAC	6 cut(s)	389, 982, 1358, 1366, 1375, 1489
MalI	GATC	2 cut(s)	271, 953
MbiI	CCGCTC	2 cut(s)	12, 27
MboI	GATC	2 cut(s)	269, 951
MfeI	CAATTG	2 cut(s)	1233, 1437
MflI	RGATCY	1 cut(s)	269
MhlI	GDGCHC	4 cut(s)	267, 683, 692, 823
MluCI	AATT	4 cut(s)	112, 1014, 1233, 1437
Mly113I	GGCGCC	1 cut(s)	282
MlyI	GAGTC	5 cut(s)	101, 130, 300, 1561, 1727
MmeI	TCCRAC	3 cut(s)	201, 588, 847
MseI	TTAA	1 cut(s)	1097
MspA1I	CMGCKG	2 cut(s)	1088, 1256
MspI	CCGG	9 cut(s)	86, 130, 140, 285, 327, 360, 824, 1144, 1371
MspR9I	CCNGG	5 cut(s)	86, 566, 626, 825, 1144
MunI	CAATTG	2 cut(s)	1233, 1437
MvaI	CCWGG	2 cut(s)	566, 626
MvnI	CGCG	2 cut(s)	169, 529
NarI	GGCGCC	1 cut(s)	282
NciI	CCSGG	3 cut(s)	86, 825, 1144
NcoI	CCATGG	4 cut(s)	888, 945, 1184, 1583
NdeI	CATATG	1 cut(s)	1717
NdeII	GATC	2 cut(s)	269, 951
NheI	GCTAGC	1 cut(s)	976
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	3 cut(s)	982, 1375, 1489
NspI	RCATGY	1 cut(s)	1712
PaeI	GCATGC	1 cut(s)	1712
PaeR7I	CTCGAG	3 cut(s)	308, 915, 1751
PcsI	WCGNNNNNNNCGW	3 cut(s)	140, 360, 414
PfeI	GAWTC	5 cut(s)	288, 412, 572, 588, 907
Pfl23II	CGTACG	1 cut(s)	1351
PfoI	TCCNGGA	1 cut(s)	84
PkrI	GCNGC	8 cut(s)	29, 32, 35, 428, 481, 520, 1087, 1249
PleI	GAGTC	5 cut(s)	100, 130, 300, 1560, 1727
PluTI	GGCGCC	1 cut(s)	285
PpsI	GAGTC	5 cut(s)	100, 130, 300, 1560, 1727
PpuMI	RGGWCCY	1 cut(s)	247
Psp5II	RGGWCCY	1 cut(s)	247
Psp6I	CCWGG	2 cut(s)	564, 624
PspFI	CCCAGC	1 cut(s)	105
PspGI	CCWGG	2 cut(s)	564, 624
PspLI	CGTACG	1 cut(s)	1351
PspPI	GGNCC	8 cut(s)	171, 247, 329, 537, 628, 942, 1068, 1141
PspPPI	RGGWCCY	1 cut(s)	247
PspXI	VCTCGAGB	2 cut(s)	308, 1751
PstNI	CAGNNNCTG	1 cut(s)	788
PsuI	RGATCY	1 cut(s)	269
PvuII	CAGCTG	2 cut(s)	1088, 1256
RsaI	GTAC	4 cut(s)	623, 1002, 1216, 1353
RsaNI	GTAC	4 cut(s)	622, 1001, 1215, 1352
SalI	GTCGAC	1 cut(s)	133
SaqAI	TTAA	1 cut(s)	1097
SatI	GCNGC	8 cut(s)	28, 31, 34, 427, 480, 519, 1086, 1248
Sau3AI	GATC	2 cut(s)	269, 951
Sau96I	GGNCC	8 cut(s)	171, 247, 329, 537, 628, 942, 1068, 1141
SchI	GAGTC	5 cut(s)	101, 130, 300, 1561, 1727
ScrFI	CCNGG	5 cut(s)	86, 566, 626, 825, 1144
SduI	GDGCHC	4 cut(s)	267, 683, 692, 823
SfaNI	GCATC	5 cut(s)	837, 1167, 1192, 1375, 1617
SfoI	GGCGCC	1 cut(s)	283
Sfr274I	CTCGAG	3 cut(s)	308, 915, 1751
SinI	GGWCC	6 cut(s)	171, 247, 329, 537, 628, 942
SlaI	CTCGAG	3 cut(s)	308, 915, 1751
SmlI	CTYRAG	5 cut(s)	308, 676, 915, 1194, 1751
SmoI	CTYRAG	5 cut(s)	308, 676, 915, 1194, 1751
SpeI	ACTAGT	1 cut(s)	1109
SphI	GCATGC	1 cut(s)	1712
Sse9I	AATT	4 cut(s)	112, 1014, 1233, 1437
SspDI	GGCGCC	1 cut(s)	281
SspMI	CTAG	3 cut(s)	764, 977, 1110
StyD4I	CCNGG	5 cut(s)	84, 564, 624, 823, 1142
StyI	CCWWGG	4 cut(s)	888, 945, 1184, 1583
TaaI	ACNGT	6 cut(s)	595, 602, 673, 1054, 1410, 1672
TaiI	ACGT	4 cut(s)	354, 711, 729, 867
TasI	AATT	4 cut(s)	112, 1014, 1233, 1437
TauI	GCSGC	5 cut(s)	30, 33, 36, 429, 521
TfiI	GAWTC	5 cut(s)	288, 412, 572, 588, 907
Tru1I	TTAA	1 cut(s)	1097
Tru9I	TTAA	1 cut(s)	1097
TscAI	CASTG	2 cut(s)	307, 598
TseFI	GTSAC	3 cut(s)	982, 1375, 1489
TseI	GCWGC	3 cut(s)	479, 1085, 1247
Tsp45I	GTSAC	3 cut(s)	982, 1375, 1489
TspDTI	ATGAA	4 cut(s)	239, 733, 1309, 1704
TspGWI	ACGGA	2 cut(s)	262, 1397
TspRI	CASTG	2 cut(s)	307, 598
VpaK11BI	GGWCC	6 cut(s)	171, 247, 329, 537, 628, 942
XceI	RCATGY	1 cut(s)	1712
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1581
XhoI	CTCGAG	3 cut(s)	308, 915, 1751
XmiI	GTMKAC	1 cut(s)	134
XspI	CTAG	3 cut(s)	764, 977, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.