Rh4BG066000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
11756565 .. 11759167
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG066000.1

Sequence Viewer

Length: 255 bp
ATGAATGAGCAGCAATCAGTAGTTCAGGATGGACCAATTCAAGTTGATGAGCTGCAACAAAGAAGGTTGGGGCTTGAAAATGTGGATTCTGTAATTGTTGGTATGCAACAAGTGGAGCTAAATGGGTCAACAGCCAAACAGAGGCCTAAAGATAAAGGGAAGCAAGAGATGGTTGTTGAAGAAAGTGAAGTTCCAAAGAAGAAGAAAGGCAGACCTAAGAAAGAGCTGAAAAGGAGCCCCAAAACCCAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

84

Amino Acids

9.56

Weight (kDa)

9.52

Isoelectric Point (pI)

61.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 141
AgsI TTSAA 3 cut(s) 41, 77, 179
AluBI AGCT 3 cut(s) 52, 118, 226
AluI AGCT 3 cut(s) 52, 118, 226
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 2 cut(s) 10, 52
AspS9I GGNCC 1 cut(s) 32
AvaII GGWCC 1 cut(s) 32
BanII GRGCYC 1 cut(s) 239
BbvI GCAGC 2 cut(s) 22, 39
BccI CCATC 2 cut(s) 23, 163
BisI GCNGC 2 cut(s) 11, 53
BlsI GCNGC 2 cut(s) 12, 54
Bme18I GGWCC 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 236
Bsc4I CCNNNNNNNGG 1 cut(s) 141
BseGI GGATG 1 cut(s) 34
BseLI CCNNNNNNNGG 1 cut(s) 141
BseXI GCAGC 2 cut(s) 22, 39
BshFI GGCC 1 cut(s) 145
BslI CCNNNNNNNGG 1 cut(s) 141
BsnI GGCC 1 cut(s) 145
Bsp1286I GDGCHC 1 cut(s) 239
BspANI GGCC 1 cut(s) 145
BspLI GGNNCC 1 cut(s) 236
BstDEI CTNAG 1 cut(s) 216
BstF5I GGATG 1 cut(s) 34
BstV1I GCAGC 2 cut(s) 22, 39
BsuRI GGCC 1 cut(s) 145
BtsCI GGATG 1 cut(s) 34
Cfr13I GGNCC 1 cut(s) 32
CviJI RGCY 7 cut(s) 52, 73, 118, 134, 145, 226, 237
CviKI_1 RGCY 7 cut(s) 52, 73, 118, 134, 145, 226, 237
DdeI CTNAG 1 cut(s) 216
Eco147I AGGCCT 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 239
Eco47I GGWCC 1 cut(s) 32
EcoT38I GRGCYC 1 cut(s) 239
FaiI YATR 1 cut(s) 104
Fnu4HI GCNGC 2 cut(s) 11, 53
FokI GGATG 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 2 cut(s) 11, 53
GluI GCNGC 2 cut(s) 11, 53
HaeIII GGCC 1 cut(s) 145
HincII GTYRAC 1 cut(s) 129
HindII GTYRAC 1 cut(s) 129
HinfI GANTC 1 cut(s) 86
Hpy166II GTNNAC 1 cut(s) 129
Hpy188III TCNNGA 1 cut(s) 26
Hpy8I GTNNAC 1 cut(s) 129
HpyAV CCTTC 1 cut(s) 57
HpyCH4V TGCA 2 cut(s) 55, 106
HpyF3I CTNAG 1 cut(s) 216
LmnI GCTCC 2 cut(s) 115, 234
LpnPI CCDG 1 cut(s) 11
Lsp1109I GCAGC 2 cut(s) 22, 39
MboII GAAGA 3 cut(s) 191, 211, 214
MhlI GDGCHC 1 cut(s) 239
MluCI AATT 2 cut(s) 36, 93
MnlI CCTC 1 cut(s) 135
NlaIV GGNNCC 1 cut(s) 236
PceI AGGCCT 1 cut(s) 145
PfeI GAWTC 1 cut(s) 86
PkrI GCNGC 2 cut(s) 12, 54
PspN4I GGNNCC 1 cut(s) 236
PspPI GGNCC 1 cut(s) 32
SatI GCNGC 2 cut(s) 11, 53
Sau96I GGNCC 1 cut(s) 32
SduI GDGCHC 1 cut(s) 239
SetI ASST 5 cut(s) 54, 68, 120, 217, 228
SgeI CNNG 5 cut(s) 38, 53, 86, 122, 176
SinI GGWCC 1 cut(s) 32
Sse9I AATT 2 cut(s) 36, 93
SseBI AGGCCT 1 cut(s) 145
StuI AGGCCT 1 cut(s) 145
TasI AATT 2 cut(s) 36, 93
TfiI GAWTC 1 cut(s) 86
TseI GCWGC 2 cut(s) 10, 52
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.