Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0005076

Physical Location & Seq

Genomic Coordinates Forward (+)

17024008 .. 17026722

Gene Structure 2715 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027940

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGATAATGAGTAACTCATCCCATTCTGAACCTTTACCTCACCAACAAAGCCAAAACCCAATGAACAGTGATGGAGTTTCAGACATTAAGATCAGTAGCCCATCCTCTCCTGGACGTTTACAAGACCAAGAAATAAAAAACCAAATGACTAATGATGCATTTTCAGCCATGGAAACTGCACCAGTTGATATCCATGCCCCTACTGCAATAACCGGCTCCGGAGGAGATTATGAGCCAATAAGAAGCTTTGAAGATGCCAAGAACATATGCTTTGTGGAGAGCAAAAAGCTTTGGATGATTGCAGGGCCAATTATCTTTAACATGTTGTGCAACTATGGTATTAACTCATTCACAAACATCTTTGCTGGGCATATTGGCAATGTTGAGCTCTCTGCTATTGCAATATCCCTGTCTGTCATTGGAAATTTCTCTTTCGGCTTCCTGCTTGGTATGGCAAGTGCACTTGAAACACTATGTGGGCAGGCATTTGGTGCTGGGCAAGTAGGCATGCTAGGAGTTTACTTGCAACGCTCATGGATAATTCTGATCGTCACTTCCTTCTGTTTACTACCACTGTACATATACTCAGGGCCGGCCTTGAAACTCCTAGGGCAAGAAGATGACGTTGCAGACCTTGCCGGGAAGTTCTCAATCCAAACTATCCCTCAGCTGTTTTCACTTGCCATTAATTTCCCAACACAGAAGTTCTTGCAGGCTCAGAGCAAGGTACGAGTACTAGCATGCATTGGCATTGCAACACTCCTAGTACACATAGGACTCCTAAGTGTCTTCATCAAGGTTTTGGGGTGGGGAACTACCGGTGCAGCTGCGGCCTATAATGTCTCAGCCTGGGGTATGACACTGGCTCAGGTGGTATATGTAGTTGGTTGGTGCAGAGATGGCTGGAAGGGATTGTCATTGTTAGCTTTCAAGGAGTTATGGTCCTTTTTGAAACTCTCTATTGCTTCAGCTGTAATGCTTTGCCTAGAGATTTGGTATTTCATGACCATAATTGTTCTCACTGGACACCTTGAGAATCCTGTTGTTGCTGTTGGCTCCCTTTCAATATGCATGAATGTGAATGGATGGGAAGGTGTATTTTTCATTGGGGTCAATGCAGCTATAAGCGTTCGAGTCTCCAATGAGCTTGGATCAGCACGTCCAAGAGCTGCAAAATACTCCGTCATTGTCACCATAGTTGAGTCTCTCATCATTGGGATTATTTTCGGGGGGATTATCCTGGCTGCCAAGGACCATTTTGCCATCATCTTTACCAGCAGCAAAGAGCTGCAACACGCGGTATCTCGTTTAGCAATCCTTCTTAGTGTGACAATGGTGCTTAATAGTGTCCAGCCGGTTATATCAGGTGTTGCTGTTGGAGGAGGGTGGCAAGCTTTGGTGGCTTACATAAACTTGTTTTGTTATTATGTTGTGGGGCTACCTCTTGGGTTTCTTCTTGGTTATCGAACAGGTTTGAGAGTGGAGGGAATTTGGCTTGGTATGATATTTGGGACATTCTTGCAGACACTGATCCTCTCCTGCATTGTTTATAAAACCAACTGGAACAAGGAGGTAGAACAAGCCTCAATAAGAATGGAAAAATGGACTGGAGAAGAACTAGTAGTAATGCATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

546

Amino Acids

59.09

Weight (kDa)

6.37

Isoelectric Point (pI)

32.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	103 - 260	4.3e-30	MatE
MatE	PF01554	323 - 485	2.9e-26	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00350
fragaria_vesca	FvH4_7g14750 FvH4_7g15820 FvH4_7g16700
malus_domestica	MD01G1066100.v1.1 MD07G1134500.v1.1
prunus_persica	Prupe.2G173200_v2.0.a1
pyrus_communis	pycom07g13180
rosa_chinensis	RchiOBHm_Chr1g0358621 RchiOBHm_Chr1g0359861
rosa_laevigata	RLG00000027848 RLG00000027940
rosa_multiflora	Rmu_sc0001609.1_g000022 Rmu_sc0003191.1_g000011
rosa_roxburghii	Rroxscaffold_4G00297750
rosa_rugosa	Rorug01G0250800 Rorug01G0262900 Rorug01G0263000 Rorug01G0273300
rosa_samantha	Rh1AG264700 Rh1AG278200 Rh1AG287400 Rh1CG248400 Rh1CG261600 Rh1CG270500 Rh1DG259800 Rh1DG282100
rosa_wichuraiana	Rw1G023420 Rw1G024690 Rw1G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1551
AccII	CGCG	1 cut(s)	1298
AccIII	TCCGGA	1 cut(s)	218
AciI	CCGC	2 cut(s)	830, 1298
AclWI	GGATC	2 cut(s)	1159, 1525
AcsI	RAATTY	2 cut(s)	424, 1488
AcuI	CTGAAG	1 cut(s)	951
AdeI	CACNNNGTG	1 cut(s)	476
AfaI	GTAC	4 cut(s)	578, 729, 735, 768
AflIII	ACRYGT	1 cut(s)	321
AgeI	ACCGGT	1 cut(s)	818
AgsI	TTSAA	6 cut(s)	251, 467, 601, 931, 952, 1065
AhlI	ACTAGT	1 cut(s)	1618
AjiI	CACGTC	1 cut(s)	1160
AjnI	CCWGG	3 cut(s)	109, 848, 1239
Alw21I	GWGCWC	2 cut(s)	390, 463
Alw26I	GTCTC	3 cut(s)	847, 1141, 1209
Alw44I	GTGCAC	1 cut(s)	459
AlwI	GGATC	2 cut(s)	1159, 1525
AlwNI	CAGNNNCTG	1 cut(s)	1528
Aor13HI	TCCGGA	1 cut(s)	218
AoxI	GGCC	4 cut(s)	305, 590, 594, 831
ApaLI	GTGCAC	1 cut(s)	459
ApeKI	GCWGC	7 cut(s)	824, 827, 1118, 1169, 1244, 1278, 1288
ApoI	RAATTY	2 cut(s)	424, 1488
AseI	ATTAAT	1 cut(s)	687
AsiGI	ACCGGT	1 cut(s)	818
AspA2I	CCTAGG	1 cut(s)	607
AspS9I	GGNCC	4 cut(s)	305, 590, 942, 1252
AsuC2I	CCSGG	1 cut(s)	640
AsuHPI	GGTGA	2 cut(s)	32, 1183
AvaII	GGWCC	2 cut(s)	942, 1252
AvrII	CCTAGG	1 cut(s)	607
BaeGI	GKGCMC	1 cut(s)	463
BanII	GRGCYC	1 cut(s)	390
BbsI	GAAGAC	1 cut(s)	781
Bbv12I	GWGCWC	2 cut(s)	390, 463
BbvCI	CCTCAGC	1 cut(s)	666
BbvI	GCAGC	7 cut(s)	814, 836, 1130, 1156, 1231, 1275, 1290
BccI	CCATC	5 cut(s)	65, 109, 893, 1080, 1271
BciT130I	CCWGG	3 cut(s)	111, 850, 1241
BcnI	CCSGG	1 cut(s)	640
BcoDI	GTCTC	3 cut(s)	847, 1141, 1209
BcuI	ACTAGT	1 cut(s)	1618
BfaI	CTAG	6 cut(s)	512, 608, 737, 764, 986, 1619
BisI	GCNGC	8 cut(s)	825, 828, 831, 1119, 1170, 1245, 1279, 1289
BlnI	CCTAGG	1 cut(s)	607
BlsI	GCNGC	8 cut(s)	826, 829, 832, 1120, 1171, 1246, 1280, 1290
BmcAI	AGTACT	1 cut(s)	735
Bme1390I	CCNGG	4 cut(s)	111, 640, 850, 1241
Bme18I	GGWCC	2 cut(s)	942, 1252
BmgBI	CACGTC	1 cut(s)	1160
BmgT120I	GGNCC	4 cut(s)	305, 590, 942, 1252
BmiI	GGNNCC	2 cut(s)	217, 1057
BmrFI	CCNGG	4 cut(s)	111, 640, 850, 1241
BmsI	GCATC	2 cut(s)	145, 244
BpiI	GAAGAC	1 cut(s)	781
BpmI	CTGGAG	1 cut(s)	1629
Bpu10I	CCTNAGC	2 cut(s)	666, 867
BpuEI	CTTGAG	1 cut(s)	1052
BpuMI	CCSGG	1 cut(s)	640
BsaJI	CCNNGG	4 cut(s)	168, 607, 849, 1248
BsaWI	WCCGGW	2 cut(s)	218, 818
BsaXI	ACNNNNNCTCC	2 cut(s)	926, 956
Bse118I	RCCGGY	4 cut(s)	212, 592, 818, 1354
Bse1I	ACTGG	5 cut(s)	182, 867, 1027, 1565, 1612
Bse3DI	GCAATG	2 cut(s)	385, 750
BseAI	TCCGGA	1 cut(s)	218
BseBI	CCWGG	3 cut(s)	111, 850, 1241
BseDI	CCNNGG	4 cut(s)	168, 607, 849, 1248
BseGI	GGATG	4 cut(s)	17, 101, 300, 1091
BseMI	GCAATG	2 cut(s)	385, 750
BseMII	CTCAG	5 cut(s)	600, 680, 731, 858, 881
BseNI	ACTGG	5 cut(s)	182, 867, 1027, 1565, 1612
BseRI	GAGGAG	2 cut(s)	237, 1395
BseSI	GKGCMC	1 cut(s)	463
BseXI	GCAGC	7 cut(s)	814, 836, 1130, 1156, 1231, 1275, 1290
BseYI	CCCAGC	2 cut(s)	365, 494
BsgI	GTGCAG	3 cut(s)	162, 843, 913
Bsh1236I	CGCG	1 cut(s)	1298
BshFI	GGCC	4 cut(s)	307, 592, 596, 833
BshTI	ACCGGT	1 cut(s)	818
BsiHKAI	GWGCWC	2 cut(s)	390, 463
BsiSI	CCGG	6 cut(s)	213, 219, 593, 639, 819, 1355
BslFI	GGGAC	1 cut(s)	1525
BsmAI	GTCTC	3 cut(s)	847, 1141, 1209
BsmFI	GGGAC	1 cut(s)	1525
BsnI	GGCC	4 cut(s)	307, 592, 596, 833
Bsp1286I	GDGCHC	2 cut(s)	390, 463
Bsp13I	TCCGGA	1 cut(s)	218
Bsp1407I	TGTACA	1 cut(s)	576
Bsp143I	GATC	4 cut(s)	90, 546, 1151, 1530
Bsp19I	CCATGG	1 cut(s)	168
BspACI	CCGC	2 cut(s)	830, 1298
BspANI	GGCC	4 cut(s)	307, 592, 596, 833
BspCNI	CTCAG	5 cut(s)	599, 679, 730, 857, 880
BspEI	TCCGGA	1 cut(s)	218
BspFNI	CGCG	1 cut(s)	1298
BspHI	TCATGA	1 cut(s)	1002
BspLI	GGNNCC	2 cut(s)	217, 1057
BspPI	GGATC	2 cut(s)	1159, 1525
BsrDI	GCAATG	2 cut(s)	385, 750
BsrFI	RCCGGY	4 cut(s)	212, 592, 818, 1354
BsrGI	TGTACA	1 cut(s)	576
BsrI	ACTGG	5 cut(s)	182, 867, 1027, 1565, 1612
BssAI	RCCGGY	4 cut(s)	212, 592, 818, 1354
BssECI	CCNNGG	4 cut(s)	168, 607, 849, 1248
BssMI	GATC	4 cut(s)	90, 546, 1151, 1530
BssT1I	CCWWGG	3 cut(s)	168, 607, 1248
Bst2UI	CCWGG	3 cut(s)	111, 850, 1241
Bst4CI	ACNGT	2 cut(s)	68, 576
BstAPI	GCANNNNNTGC	2 cut(s)	491, 635
BstAUI	TGTACA	1 cut(s)	576
BstC8I	GCNNGC	6 cut(s)	483, 509, 594, 714, 742, 1392
BstDEI	CTNAG	7 cut(s)	586, 666, 717, 782, 844, 867, 1322
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	4 cut(s)	17, 101, 300, 1091
BstFNI	CGCG	1 cut(s)	1298
BstKTI	GATC	4 cut(s)	93, 549, 1154, 1533
BstMAI	GTCTC	3 cut(s)	847, 1141, 1209
BstMBI	GATC	4 cut(s)	90, 546, 1151, 1530
BstMWI	GCNNNNNNNGC	7 cut(s)	164, 203, 491, 635, 830, 900, 1400
BstNI	CCWGG	3 cut(s)	111, 850, 1241
BstNSI	RCATGY	3 cut(s)	325, 511, 744
BstSCI	CCNGG	4 cut(s)	109, 638, 848, 1239
BstSLI	GKGCMC	1 cut(s)	463
BstUI	CGCG	1 cut(s)	1298
BstV1I	GCAGC	7 cut(s)	814, 836, 1130, 1156, 1231, 1275, 1290
BstV2I	GAAGAC	1 cut(s)	781
BsuRI	GGCC	4 cut(s)	307, 592, 596, 833
BtgI	CCRYGG	1 cut(s)	168
BtrI	CACGTC	1 cut(s)	1160
BtsCI	GGATG	4 cut(s)	17, 101, 300, 1091
BtsIMutI	CAGTG	5 cut(s)	73, 572, 860, 1020, 1526
Cac8I	GCNNGC	6 cut(s)	483, 509, 594, 714, 742, 1392
CaiI	CAGNNNCTG	1 cut(s)	1528
CciI	TCATGA	1 cut(s)	1002
Cfr10I	RCCGGY	4 cut(s)	212, 592, 818, 1354
Cfr13I	GGNCC	4 cut(s)	305, 590, 942, 1252
Csp6I	GTAC	4 cut(s)	577, 728, 734, 767
CspAI	ACCGGT	1 cut(s)	818
CviAII	CATG	8 cut(s)	169, 194, 322, 508, 534, 741, 1003, 1072
CviQI	GTAC	4 cut(s)	577, 728, 734, 767
DdeI	CTNAG	7 cut(s)	586, 666, 717, 782, 844, 867, 1322
DpnI	GATC	4 cut(s)	92, 548, 1153, 1532
DpnII	GATC	4 cut(s)	90, 546, 1151, 1530
DraIII	CACNNNGTG	1 cut(s)	476
Ecl136II	GAGCTC	1 cut(s)	388
Eco130I	CCWWGG	3 cut(s)	168, 607, 1248
Eco24I	GRGCYC	1 cut(s)	390
Eco32I	GATATC	1 cut(s)	190
Eco47I	GGWCC	2 cut(s)	942, 1252
Eco53kI	GAGCTC	1 cut(s)	388
Eco57I	CTGAAG	1 cut(s)	951
EcoICRI	GAGCTC	1 cut(s)	388
EcoRII	CCWGG	3 cut(s)	109, 848, 1239
EcoRV	GATATC	1 cut(s)	190
EcoT14I	CCWWGG	3 cut(s)	168, 607, 1248
EcoT22I	ATGCAT	4 cut(s)	160, 746, 1073, 1632
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	3 cut(s)	168, 607, 1248
FaeI	CATG	8 cut(s)	172, 197, 325, 511, 537, 744, 1006, 1075
FaqI	GGGAC	1 cut(s)	1525
FatI	CATG	8 cut(s)	168, 193, 321, 507, 533, 740, 1002, 1071
FauNDI	CATATG	1 cut(s)	266
Fnu4HI	GCNGC	8 cut(s)	825, 828, 831, 1119, 1170, 1245, 1279, 1289
FokI	GGATG	4 cut(s)	4, 88, 307, 1098
FriOI	GRGCYC	1 cut(s)	390
FseI	GGCCGGCC	1 cut(s)	596
Fsp4HI	GCNGC	8 cut(s)	825, 828, 831, 1119, 1170, 1245, 1279, 1289
FspBI	CTAG	6 cut(s)	512, 608, 737, 764, 986, 1619
GluI	GCNGC	8 cut(s)	825, 828, 831, 1119, 1170, 1245, 1279, 1289
GsaI	CCCAGC	2 cut(s)	369, 498
GsuI	CTGGAG	1 cut(s)	1629
HaeIII	GGCC	4 cut(s)	307, 592, 596, 833
HapII	CCGG	6 cut(s)	213, 219, 593, 639, 819, 1355
Hin1II	CATG	8 cut(s)	172, 197, 325, 511, 537, 744, 1006, 1075
HindIII	AAGCTT	3 cut(s)	244, 287, 1392
HinfI	GANTC	4 cut(s)	777, 1036, 1134, 1202
HpaII	CCGG	6 cut(s)	213, 219, 593, 639, 819, 1355
HphI	GGTGA	2 cut(s)	32, 1183
Hpy166II	GTNNAC	5 cut(s)	119, 461, 520, 566, 769
Hpy188I	TCNGA	4 cut(s)	28, 82, 546, 720
Hpy188III	TCNNGA	2 cut(s)	219, 1003
Hpy8I	GTNNAC	5 cut(s)	119, 461, 520, 566, 769
HpyAV	CCTTC	4 cut(s)	568, 901, 1085, 1328
HpyCH4III	ACNGT	2 cut(s)	68, 576
HpyCH4IV	ACGT	3 cut(s)	115, 624, 1159
HpyF10VI	GCNNNNNNNGC	7 cut(s)	164, 203, 491, 635, 830, 900, 1400
HpyF3I	CTNAG	7 cut(s)	586, 666, 717, 782, 844, 867, 1322
HpySE526I	ACGT	3 cut(s)	115, 624, 1159
Hsp92II	CATG	8 cut(s)	172, 197, 325, 511, 537, 744, 1006, 1075
Kpn2I	TCCGGA	1 cut(s)	218
KroI	GCCGGC	1 cut(s)	592
KroNI	GCCGGC	1 cut(s)	594
Kzo9I	GATC	4 cut(s)	90, 546, 1151, 1530
LmnI	GCTCC	2 cut(s)	221, 1061
Lsp1109I	GCAGC	7 cut(s)	814, 836, 1130, 1156, 1231, 1275, 1290
LweI	GCATC	2 cut(s)	145, 244
MaeI	CTAG	6 cut(s)	512, 608, 737, 764, 986, 1619
MaeII	ACGT	3 cut(s)	115, 624, 1159
MaeIII	GTNAC	4 cut(s)	11, 550, 1189, 1327
MalI	GATC	4 cut(s)	92, 548, 1153, 1532
MboI	GATC	4 cut(s)	90, 546, 1151, 1530
MboII	GAAGA	5 cut(s)	263, 629, 781, 1445, 1625
MhlI	GDGCHC	2 cut(s)	390, 463
MluCI	AATT	6 cut(s)	309, 424, 540, 688, 1011, 1488
MlyI	GAGTC	3 cut(s)	771, 1143, 1211
MmeI	TCCRAC	1 cut(s)	1357
Mph1103I	ATGCAT	4 cut(s)	160, 746, 1073, 1632
MroI	TCCGGA	1 cut(s)	218
MroNI	GCCGGC	1 cut(s)	592
MseI	TTAA	5 cut(s)	87, 318, 342, 687, 1341
MslI	CAYNNNNRTG	1 cut(s)	1076
MspA1I	CMGCKG	3 cut(s)	670, 827, 971
MspI	CCGG	6 cut(s)	213, 219, 593, 639, 819, 1355
MspR9I	CCNGG	4 cut(s)	111, 640, 850, 1241
MvaI	CCWGG	3 cut(s)	111, 850, 1241
MvnI	CGCG	1 cut(s)	1298
MwoI	GCNNNNNNNGC	7 cut(s)	164, 203, 491, 635, 830, 900, 1400
NaeI	GCCGGC	1 cut(s)	594
NciI	CCSGG	1 cut(s)	640
NcoI	CCATGG	1 cut(s)	168
NdeI	CATATG	1 cut(s)	266
NdeII	GATC	4 cut(s)	90, 546, 1151, 1530
NgoMIV	GCCGGC	1 cut(s)	592
NlaIII	CATG	8 cut(s)	172, 197, 325, 511, 537, 744, 1006, 1075
NlaIV	GGNNCC	2 cut(s)	217, 1057
NmuCI	GTSAC	3 cut(s)	550, 1189, 1327
NsiI	ATGCAT	4 cut(s)	160, 746, 1073, 1632
NspI	RCATGY	3 cut(s)	325, 511, 744
PaeI	GCATGC	2 cut(s)	511, 744
PagI	TCATGA	1 cut(s)	1002
PciI	ACATGT	1 cut(s)	321
PdiI	GCCGGC	1 cut(s)	594
PfeI	GAWTC	1 cut(s)	1036
PfoI	TCCNGGA	1 cut(s)	109
PinAI	ACCGGT	1 cut(s)	818
PkrI	GCNGC	8 cut(s)	826, 829, 832, 1120, 1171, 1246, 1280, 1290
PleI	GAGTC	3 cut(s)	771, 1142, 1210
PpsI	GAGTC	3 cut(s)	771, 1142, 1210
PscI	ACATGT	1 cut(s)	321
PshBI	ATTAAT	1 cut(s)	687
PsiI	TTATAA	1 cut(s)	1551
Psp124BI	GAGCTC	1 cut(s)	390
Psp6I	CCWGG	3 cut(s)	109, 848, 1239
PspFI	CCCAGC	2 cut(s)	365, 494
PspGI	CCWGG	3 cut(s)	109, 848, 1239
PspN4I	GGNNCC	2 cut(s)	217, 1057
PspPI	GGNCC	4 cut(s)	305, 590, 942, 1252
PstNI	CAGNNNCTG	1 cut(s)	1528
PvuII	CAGCTG	3 cut(s)	670, 827, 971
RigI	GGCCGGCC	1 cut(s)	596
RsaI	GTAC	4 cut(s)	578, 729, 735, 768
RsaNI	GTAC	4 cut(s)	577, 728, 734, 767
RseI	CAYNNNNRTG	1 cut(s)	1076
SacI	GAGCTC	1 cut(s)	390
SaqAI	TTAA	5 cut(s)	87, 318, 342, 687, 1341
SatI	GCNGC	8 cut(s)	825, 828, 831, 1119, 1170, 1245, 1279, 1289
Sau3AI	GATC	4 cut(s)	90, 546, 1151, 1530
Sau96I	GGNCC	4 cut(s)	305, 590, 942, 1252
ScaI	AGTACT	1 cut(s)	735
SchI	GAGTC	3 cut(s)	771, 1143, 1211
ScrFI	CCNGG	4 cut(s)	111, 640, 850, 1241
SduI	GDGCHC	2 cut(s)	390, 463
SfaNI	GCATC	2 cut(s)	145, 244
SinI	GGWCC	2 cut(s)	942, 1252
SmiMI	CAYNNNNRTG	1 cut(s)	1076
SmlI	CTYRAG	1 cut(s)	1031
SmoI	CTYRAG	1 cut(s)	1031
SpeI	ACTAGT	1 cut(s)	1618
SphI	GCATGC	2 cut(s)	511, 744
Sse9I	AATT	6 cut(s)	309, 424, 540, 688, 1011, 1488
SsiI	CCGC	2 cut(s)	830, 1298
SspMI	CTAG	6 cut(s)	512, 608, 737, 764, 986, 1619
SstI	GAGCTC	1 cut(s)	390
StyD4I	CCNGG	4 cut(s)	109, 638, 848, 1239
StyI	CCWWGG	3 cut(s)	168, 607, 1248
TaaI	ACNGT	2 cut(s)	68, 576
TaiI	ACGT	3 cut(s)	118, 627, 1162
TaqI	TCGA	2 cut(s)	1132, 1465
TasI	AATT	6 cut(s)	309, 424, 540, 688, 1011, 1488
TatI	WGTACW	3 cut(s)	576, 733, 766
TauI	GCSGC	1 cut(s)	833
TfiI	GAWTC	1 cut(s)	1036
Tru1I	TTAA	5 cut(s)	87, 318, 342, 687, 1341
Tru9I	TTAA	5 cut(s)	87, 318, 342, 687, 1341
TscAI	CASTG	5 cut(s)	73, 579, 867, 1027, 1533
TseFI	GTSAC	3 cut(s)	550, 1189, 1327
TseI	GCWGC	7 cut(s)	824, 827, 1118, 1169, 1244, 1278, 1288
Tsp45I	GTSAC	3 cut(s)	550, 1189, 1327
TspDTI	ATGAA	5 cut(s)	77, 781, 991, 1088, 1093
TspGWI	ACGGA	1 cut(s)	1171
TspRI	CASTG	5 cut(s)	73, 579, 867, 1027, 1533
VneI	GTGCAC	1 cut(s)	459
VpaK11BI	GGWCC	2 cut(s)	942, 1252
VspI	ATTAAT	1 cut(s)	687
XapI	RAATTY	2 cut(s)	424, 1488
XceI	RCATGY	3 cut(s)	325, 511, 744
XmaJI	CCTAGG	1 cut(s)	607
XspI	CTAG	6 cut(s)	512, 608, 737, 764, 986, 1619
ZrmI	AGTACT	1 cut(s)	735
Zsp2I	ATGCAT	4 cut(s)	160, 746, 1073, 1632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.