Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0005076

Physical Location & Seq

Genomic Coordinates Reverse (-)

52612665 .. 52616983

Gene Structure 4319 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG261600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGAATAATAATTCAGCCCTGAAAATGAGTAACTCATCCCCTTCTGAACTTTCACCTAACCAACAAAGCCAAAACCCAATGAACAATGATGGAGTTTCAGACATTAAGATCAGTAGCCCATCCTCTCCTGGACGTTTACCAGACCAAGAAATAAAAAACCAAATGACTAATGATGCATTTTCAGCCATGGAAACTGCACCAGCTGATGTCCATGCCCCTACTGCAATAACCAGCTCCGGAGGAGATTATGAGCCAATAAGAAGCTTTGAAGATGCCAAGAACATATGCTTTGTGGAGAGCAAAAAGCTTTGGATGATTGCAGGGCCAATTATCTTTAACATGTTGTGCAACTATGGTATTAACTCATTCACAAACATCTTTGCTGGGCATATTGGCAATGTTGAGCTCTCTGCTATTGCAATATCTCTGTCTGTCATTGGAAATTTCTCTTTCGGCTTCCTGCTTGGTATGGCAAGTGCACTTGAAACACTATGTGGTCAGGCATTTGGTGCCGGGCAAGTAGGCATGCTAGGAGTTTACTTGCAACGCTCATGGATAATTCTGATTGTCACTTGCTTCTGTTTACTACCACTGTACATATACTCAGGGCCGGCCTTGAAACTCCTAGGGCAAGAAGACGACGTTGCAGACCTTGCCGGGAAGTTCACAATCCAAACTATCCCTCAGCTGTTTTCACTTGCCATTAATTTCCCAACACAGAAGTTCTTGCAGGCTCAGAGCAAGGTACGAGTACTAGCATGCATTGGCATTGCAACACTCCTAGTGCACATAGGACTCCTAAGTGTCTTCATCAAGGTTTTGGGGTGGGGAACTACCGGTGCAGCTGCGGCCTATAATGTCTCAGCCTGGGGTATGACACTGGCTCAGGTGGTATATGTAGTTGGTTGGTGCAGAGATGGCTGGAAGGGATTGTCATTGTTAGCTTTCAAGGAGTTATGGGCCTTTTTGAAACTCTCTATTGCTTCAGCTGTAATGCTTTGCCTAGAGATTTGGTATTTCATGACCATAATTGTTCTCACTGGACACCTTGAGAATCCTGTTATTGCTGTTGGCTCCCTTTCAATATGCATGAATGTGAATGGATGGGAAGGTGTATTTTTCATTGGGGTCAATGCAGCTATAAGCGTTCGAGTCTCCAATGAGCTTGGATCAGCACGTCCAAGAGCTGCAAAATACTCTGTCATTGTCACCATAGTTGAGTCTCTCATCATTGGGATTATTTTCGGGGGGATTATCCTGGCTGCTAAGGACCATTTTTCCATCATCTTTACCAGCAGCAAAGAGCTGCAACACGCGGTATCTCGTTTAGCAATCCTTCTTAGTGTGACAATGGTGCTTAATAGTGTCCAGCCGGTTATATCAGGTGTTGCTGTTGGAGGAGGGTGGCAAGCTTTGGTGGCTTACATAAACTTGTTTTGTTATTATGTTGTGGGGCTACCTCTTGGGTTTCTTCTTGGTTATCGAACAGGTTTGAGAGTGGAGGGAATTTGGCTTGGTATGATATTTGGGACATTCTTGCAGACACTGATCCTCTCCTGCATTGTTTATAAAACCAACTGGAACAAGGAGGTAGAACAAGCCTCAATAAGAATGGAAAAATGGACCGGAGAAGAACTAGTAGTAATGCATCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

551

Amino Acids

59.67

Weight (kDa)

6.46

Isoelectric Point (pI)

33.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	109 - 266	1.3e-29	MatE
MatE	PF01554	329 - 491	1.6e-25	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00350
fragaria_vesca	FvH4_7g14750 FvH4_7g15820 FvH4_7g16700
malus_domestica	MD01G1066100.v1.1 MD07G1134500.v1.1
prunus_persica	Prupe.2G173200_v2.0.a1
pyrus_communis	pycom07g13180
rosa_chinensis	RchiOBHm_Chr1g0358621 RchiOBHm_Chr1g0359861
rosa_laevigata	RLG00000027848 RLG00000027940
rosa_multiflora	Rmu_sc0001609.1_g000022 Rmu_sc0003191.1_g000011
rosa_roxburghii	Rroxscaffold_4G00297750
rosa_rugosa	Rorug01G0250800 Rorug01G0262900 Rorug01G0263000 Rorug01G0273300
rosa_samantha	Rh1AG264700 Rh1AG278200 Rh1AG287400 Rh1CG248400 Rh1CG261600 Rh1CG270500 Rh1DG259800 Rh1DG282100
rosa_wichuraiana	Rw1G023420 Rw1G024690 Rw1G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
AccB1I	GGYRCC	1 cut(s)	509
AccII	CGCG	1 cut(s)	1316
AccIII	TCCGGA	1 cut(s)	236
AciI	CCGC	2 cut(s)	848, 1316
AclWI	GGATC	2 cut(s)	1177, 1543
AcsI	RAATTY	2 cut(s)	442, 1506
AcuI	CTGAAG	1 cut(s)	969
AdeI	CACNNNGTG	1 cut(s)	494
AfaI	GTAC	3 cut(s)	596, 747, 753
AflIII	ACRYGT	1 cut(s)	339
AgeI	ACCGGT	1 cut(s)	836
AgsI	TTSAA	6 cut(s)	269, 485, 619, 949, 970, 1083
AhlI	ACTAGT	1 cut(s)	1636
AjiI	CACGTC	1 cut(s)	1178
AjnI	CCWGG	3 cut(s)	127, 866, 1257
Alw21I	GWGCWC	3 cut(s)	408, 481, 789
Alw26I	GTCTC	3 cut(s)	865, 1159, 1227
Alw44I	GTGCAC	2 cut(s)	477, 785
AlwI	GGATC	2 cut(s)	1177, 1543
AlwNI	CAGNNNCTG	1 cut(s)	1546
Aor13HI	TCCGGA	1 cut(s)	236
AoxI	GGCC	5 cut(s)	323, 608, 612, 849, 960
ApaLI	GTGCAC	2 cut(s)	477, 785
ApeKI	GCWGC	7 cut(s)	842, 845, 1136, 1187, 1262, 1296, 1306
ApoI	RAATTY	2 cut(s)	442, 1506
AseI	ATTAAT	1 cut(s)	705
AsiGI	ACCGGT	1 cut(s)	836
AspA2I	CCTAGG	1 cut(s)	625
AspS9I	GGNCC	5 cut(s)	323, 608, 960, 1270, 1623
AsuC2I	CCSGG	2 cut(s)	514, 658
AsuHPI	GGTGA	2 cut(s)	45, 1201
AvaII	GGWCC	2 cut(s)	1270, 1623
AvrII	CCTAGG	1 cut(s)	625
BaeGI	GKGCMC	2 cut(s)	481, 789
BanI	GGYRCC	1 cut(s)	509
BanII	GRGCYC	1 cut(s)	408
BbsI	GAAGAC	2 cut(s)	642, 799
Bbv12I	GWGCWC	3 cut(s)	408, 481, 789
BbvCI	CCTCAGC	1 cut(s)	684
BbvI	GCAGC	7 cut(s)	832, 854, 1148, 1174, 1249, 1293, 1308
BccI	CCATC	5 cut(s)	83, 127, 911, 1098, 1289
BciT130I	CCWGG	3 cut(s)	129, 868, 1259
BcnI	CCSGG	2 cut(s)	514, 658
BcoDI	GTCTC	3 cut(s)	865, 1159, 1227
BcuI	ACTAGT	1 cut(s)	1636
BfaI	CTAG	6 cut(s)	530, 626, 755, 782, 1004, 1637
BisI	GCNGC	8 cut(s)	843, 846, 849, 1137, 1188, 1263, 1297, 1307
BlnI	CCTAGG	1 cut(s)	625
BlsI	GCNGC	8 cut(s)	844, 847, 850, 1138, 1189, 1264, 1298, 1308
BmcAI	AGTACT	1 cut(s)	753
Bme1390I	CCNGG	5 cut(s)	129, 514, 658, 868, 1259
Bme18I	GGWCC	2 cut(s)	1270, 1623
BmgBI	CACGTC	1 cut(s)	1178
BmgT120I	GGNCC	5 cut(s)	323, 608, 960, 1270, 1623
BmiI	GGNNCC	2 cut(s)	511, 1075
BmrFI	CCNGG	5 cut(s)	129, 514, 658, 868, 1259
BmsI	GCATC	2 cut(s)	163, 262
BpiI	GAAGAC	2 cut(s)	642, 799
Bpu10I	CCTNAGC	3 cut(s)	684, 885, 1266
BpuEI	CTTGAG	1 cut(s)	1070
BpuMI	CCSGG	2 cut(s)	514, 658
BsaJI	CCNNGG	3 cut(s)	186, 625, 867
BsaWI	WCCGGW	3 cut(s)	236, 836, 1625
Bse118I	RCCGGY	3 cut(s)	610, 836, 1372
Bse1I	ACTGG	3 cut(s)	885, 1045, 1583
Bse3DI	GCAATG	2 cut(s)	403, 768
BseAI	TCCGGA	1 cut(s)	236
BseBI	CCWGG	3 cut(s)	129, 868, 1259
BseDI	CCNNGG	3 cut(s)	186, 625, 867
BseGI	GGATG	4 cut(s)	35, 119, 318, 1109
BseMI	GCAATG	2 cut(s)	403, 768
BseMII	CTCAG	5 cut(s)	618, 698, 749, 876, 899
BseNI	ACTGG	3 cut(s)	885, 1045, 1583
BseRI	GAGGAG	2 cut(s)	255, 1413
BseSI	GKGCMC	2 cut(s)	481, 789
BseXI	GCAGC	7 cut(s)	832, 854, 1148, 1174, 1249, 1293, 1308
BseYI	CCCAGC	1 cut(s)	383
BsgI	GTGCAG	3 cut(s)	180, 861, 931
Bsh1236I	CGCG	1 cut(s)	1316
BshFI	GGCC	5 cut(s)	325, 610, 614, 851, 962
BshNI	GGYRCC	1 cut(s)	509
BshTI	ACCGGT	1 cut(s)	836
BsiHKAI	GWGCWC	3 cut(s)	408, 481, 789
BsiSI	CCGG	7 cut(s)	237, 513, 611, 657, 837, 1373, 1626
BslFI	GGGAC	1 cut(s)	1543
BsmAI	GTCTC	3 cut(s)	865, 1159, 1227
BsmFI	GGGAC	1 cut(s)	1543
BsnI	GGCC	5 cut(s)	325, 610, 614, 851, 962
Bsp1286I	GDGCHC	3 cut(s)	408, 481, 789
Bsp13I	TCCGGA	1 cut(s)	236
Bsp1407I	TGTACA	1 cut(s)	594
Bsp143I	GATC	3 cut(s)	108, 1169, 1548
Bsp19I	CCATGG	1 cut(s)	186
BspACI	CCGC	2 cut(s)	848, 1316
BspANI	GGCC	5 cut(s)	325, 610, 614, 851, 962
BspCNI	CTCAG	5 cut(s)	617, 697, 748, 875, 898
BspEI	TCCGGA	1 cut(s)	236
BspFNI	CGCG	1 cut(s)	1316
BspHI	TCATGA	1 cut(s)	1020
BspLI	GGNNCC	2 cut(s)	511, 1075
BspPI	GGATC	2 cut(s)	1177, 1543
BspT107I	GGYRCC	1 cut(s)	509
BsrDI	GCAATG	2 cut(s)	403, 768
BsrFI	RCCGGY	3 cut(s)	610, 836, 1372
BsrGI	TGTACA	1 cut(s)	594
BsrI	ACTGG	3 cut(s)	885, 1045, 1583
BssAI	RCCGGY	3 cut(s)	610, 836, 1372
BssECI	CCNNGG	3 cut(s)	186, 625, 867
BssMI	GATC	3 cut(s)	108, 1169, 1548
BssT1I	CCWWGG	2 cut(s)	186, 625
Bst2UI	CCWGG	3 cut(s)	129, 868, 1259
Bst4CI	ACNGT	1 cut(s)	594
BstAPI	GCANNNNNTGC	2 cut(s)	509, 653
BstAUI	TGTACA	1 cut(s)	594
BstC8I	GCNNGC	5 cut(s)	527, 612, 732, 760, 1410
BstDEI	CTNAG	8 cut(s)	604, 684, 735, 800, 862, 885, 1266, 1340
BstDSI	CCRYGG	1 cut(s)	186
BstF5I	GGATG	4 cut(s)	35, 119, 318, 1109
BstFNI	CGCG	1 cut(s)	1316
BstKTI	GATC	3 cut(s)	111, 1172, 1551
BstMAI	GTCTC	3 cut(s)	865, 1159, 1227
BstMBI	GATC	3 cut(s)	108, 1169, 1548
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 221, 509, 653, 848, 918, 1418
BstNI	CCWGG	3 cut(s)	129, 868, 1259
BstNSI	RCATGY	3 cut(s)	343, 529, 762
BstSCI	CCNGG	5 cut(s)	127, 512, 656, 866, 1257
BstSLI	GKGCMC	2 cut(s)	481, 789
BstUI	CGCG	1 cut(s)	1316
BstV1I	GCAGC	7 cut(s)	832, 854, 1148, 1174, 1249, 1293, 1308
BstV2I	GAAGAC	2 cut(s)	642, 799
BsuRI	GGCC	5 cut(s)	325, 610, 614, 851, 962
BtgI	CCRYGG	1 cut(s)	186
BtrI	CACGTC	1 cut(s)	1178
BtsCI	GGATG	4 cut(s)	35, 119, 318, 1109
BtsIMutI	CAGTG	4 cut(s)	590, 878, 1038, 1544
Cac8I	GCNNGC	5 cut(s)	527, 612, 732, 760, 1410
CaiI	CAGNNNCTG	1 cut(s)	1546
CciI	TCATGA	1 cut(s)	1020
Cfr10I	RCCGGY	3 cut(s)	610, 836, 1372
Cfr13I	GGNCC	5 cut(s)	323, 608, 960, 1270, 1623
Csp6I	GTAC	3 cut(s)	595, 746, 752
CspAI	ACCGGT	1 cut(s)	836
CviAII	CATG	8 cut(s)	187, 212, 340, 526, 552, 759, 1021, 1090
CviQI	GTAC	3 cut(s)	595, 746, 752
DdeI	CTNAG	8 cut(s)	604, 684, 735, 800, 862, 885, 1266, 1340
DpnI	GATC	3 cut(s)	110, 1171, 1550
DpnII	GATC	3 cut(s)	108, 1169, 1548
DraIII	CACNNNGTG	1 cut(s)	494
Ecl136II	GAGCTC	1 cut(s)	406
Eco130I	CCWWGG	2 cut(s)	186, 625
Eco24I	GRGCYC	1 cut(s)	408
Eco47I	GGWCC	2 cut(s)	1270, 1623
Eco53kI	GAGCTC	1 cut(s)	406
Eco57I	CTGAAG	1 cut(s)	969
EcoICRI	GAGCTC	1 cut(s)	406
EcoRII	CCWGG	3 cut(s)	127, 866, 1257
EcoT14I	CCWWGG	2 cut(s)	186, 625
EcoT22I	ATGCAT	4 cut(s)	178, 764, 1091, 1650
EcoT38I	GRGCYC	1 cut(s)	408
ErhI	CCWWGG	2 cut(s)	186, 625
FaeI	CATG	8 cut(s)	190, 215, 343, 529, 555, 762, 1024, 1093
FaqI	GGGAC	1 cut(s)	1543
FatI	CATG	8 cut(s)	186, 211, 339, 525, 551, 758, 1020, 1089
FauNDI	CATATG	1 cut(s)	284
Fnu4HI	GCNGC	8 cut(s)	843, 846, 849, 1137, 1188, 1263, 1297, 1307
FokI	GGATG	4 cut(s)	22, 106, 325, 1116
FriOI	GRGCYC	1 cut(s)	408
FseI	GGCCGGCC	1 cut(s)	614
Fsp4HI	GCNGC	8 cut(s)	843, 846, 849, 1137, 1188, 1263, 1297, 1307
FspBI	CTAG	6 cut(s)	530, 626, 755, 782, 1004, 1637
GluI	GCNGC	8 cut(s)	843, 846, 849, 1137, 1188, 1263, 1297, 1307
GsaI	CCCAGC	1 cut(s)	387
HaeIII	GGCC	5 cut(s)	325, 610, 614, 851, 962
HapII	CCGG	7 cut(s)	237, 513, 611, 657, 837, 1373, 1626
Hin1II	CATG	8 cut(s)	190, 215, 343, 529, 555, 762, 1024, 1093
HindIII	AAGCTT	3 cut(s)	262, 305, 1410
HinfI	GANTC	4 cut(s)	795, 1054, 1152, 1220
HpaII	CCGG	7 cut(s)	237, 513, 611, 657, 837, 1373, 1626
HphI	GGTGA	2 cut(s)	45, 1201
Hpy166II	GTNNAC	6 cut(s)	137, 479, 538, 584, 666, 787
Hpy188I	TCNGA	4 cut(s)	46, 100, 564, 738
Hpy188III	TCNNGA	2 cut(s)	237, 1021
Hpy8I	GTNNAC	6 cut(s)	137, 479, 538, 584, 666, 787
Hpy99I	CGWCG	1 cut(s)	644
HpyAV	CCTTC	4 cut(s)	51, 919, 1103, 1346
HpyCH4III	ACNGT	1 cut(s)	594
HpyCH4IV	ACGT	3 cut(s)	133, 642, 1177
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 221, 509, 653, 848, 918, 1418
HpyF3I	CTNAG	8 cut(s)	604, 684, 735, 800, 862, 885, 1266, 1340
HpySE526I	ACGT	3 cut(s)	133, 642, 1177
Hsp92II	CATG	8 cut(s)	190, 215, 343, 529, 555, 762, 1024, 1093
Kpn2I	TCCGGA	1 cut(s)	236
KroI	GCCGGC	1 cut(s)	610
KroNI	GCCGGC	1 cut(s)	612
Kzo9I	GATC	3 cut(s)	108, 1169, 1548
LmnI	GCTCC	2 cut(s)	239, 1079
Lsp1109I	GCAGC	7 cut(s)	832, 854, 1148, 1174, 1249, 1293, 1308
LweI	GCATC	2 cut(s)	163, 262
MaeI	CTAG	6 cut(s)	530, 626, 755, 782, 1004, 1637
MaeII	ACGT	3 cut(s)	133, 642, 1177
MaeIII	GTNAC	4 cut(s)	29, 568, 1207, 1345
MalI	GATC	3 cut(s)	110, 1171, 1550
MboI	GATC	3 cut(s)	108, 1169, 1548
MboII	GAAGA	5 cut(s)	281, 647, 799, 1463, 1643
MhlI	GDGCHC	3 cut(s)	408, 481, 789
MluCI	AATT	7 cut(s)	10, 327, 442, 558, 706, 1029, 1506
MlyI	GAGTC	3 cut(s)	789, 1161, 1229
MmeI	TCCRAC	1 cut(s)	1375
Mph1103I	ATGCAT	4 cut(s)	178, 764, 1091, 1650
MroI	TCCGGA	1 cut(s)	236
MroNI	GCCGGC	1 cut(s)	610
MseI	TTAA	5 cut(s)	105, 336, 360, 705, 1359
MslI	CAYNNNNRTG	1 cut(s)	1094
MspA1I	CMGCKG	4 cut(s)	203, 688, 845, 989
MspI	CCGG	7 cut(s)	237, 513, 611, 657, 837, 1373, 1626
MspR9I	CCNGG	5 cut(s)	129, 514, 658, 868, 1259
MvaI	CCWGG	3 cut(s)	129, 868, 1259
MvnI	CGCG	1 cut(s)	1316
MwoI	GCNNNNNNNGC	7 cut(s)	182, 221, 509, 653, 848, 918, 1418
NaeI	GCCGGC	1 cut(s)	612
NciI	CCSGG	2 cut(s)	514, 658
NcoI	CCATGG	1 cut(s)	186
NdeI	CATATG	1 cut(s)	284
NdeII	GATC	3 cut(s)	108, 1169, 1548
NgoMIV	GCCGGC	1 cut(s)	610
NlaIII	CATG	8 cut(s)	190, 215, 343, 529, 555, 762, 1024, 1093
NlaIV	GGNNCC	2 cut(s)	511, 1075
NmuCI	GTSAC	3 cut(s)	568, 1207, 1345
NsiI	ATGCAT	4 cut(s)	178, 764, 1091, 1650
NspI	RCATGY	3 cut(s)	343, 529, 762
PaeI	GCATGC	2 cut(s)	529, 762
PagI	TCATGA	1 cut(s)	1020
PciI	ACATGT	1 cut(s)	339
PdiI	GCCGGC	1 cut(s)	612
PfeI	GAWTC	1 cut(s)	1054
PfoI	TCCNGGA	1 cut(s)	127
PinAI	ACCGGT	1 cut(s)	836
PkrI	GCNGC	8 cut(s)	844, 847, 850, 1138, 1189, 1264, 1298, 1308
PleI	GAGTC	3 cut(s)	789, 1160, 1228
PpsI	GAGTC	3 cut(s)	789, 1160, 1228
PscI	ACATGT	1 cut(s)	339
PshBI	ATTAAT	1 cut(s)	705
PsiI	TTATAA	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	408
Psp6I	CCWGG	3 cut(s)	127, 866, 1257
PspFI	CCCAGC	1 cut(s)	383
PspGI	CCWGG	3 cut(s)	127, 866, 1257
PspN4I	GGNNCC	2 cut(s)	511, 1075
PspPI	GGNCC	5 cut(s)	323, 608, 960, 1270, 1623
PstNI	CAGNNNCTG	1 cut(s)	1546
PvuII	CAGCTG	4 cut(s)	203, 688, 845, 989
RigI	GGCCGGCC	1 cut(s)	614
RsaI	GTAC	3 cut(s)	596, 747, 753
RsaNI	GTAC	3 cut(s)	595, 746, 752
RseI	CAYNNNNRTG	1 cut(s)	1094
SacI	GAGCTC	1 cut(s)	408
SaqAI	TTAA	5 cut(s)	105, 336, 360, 705, 1359
SatI	GCNGC	8 cut(s)	843, 846, 849, 1137, 1188, 1263, 1297, 1307
Sau3AI	GATC	3 cut(s)	108, 1169, 1548
Sau96I	GGNCC	5 cut(s)	323, 608, 960, 1270, 1623
ScaI	AGTACT	1 cut(s)	753
SchI	GAGTC	3 cut(s)	789, 1161, 1229
ScrFI	CCNGG	5 cut(s)	129, 514, 658, 868, 1259
SduI	GDGCHC	3 cut(s)	408, 481, 789
SfaNI	GCATC	2 cut(s)	163, 262
SinI	GGWCC	2 cut(s)	1270, 1623
SmiMI	CAYNNNNRTG	1 cut(s)	1094
SmlI	CTYRAG	1 cut(s)	1049
SmoI	CTYRAG	1 cut(s)	1049
SpeI	ACTAGT	1 cut(s)	1636
SphI	GCATGC	2 cut(s)	529, 762
Sse9I	AATT	7 cut(s)	10, 327, 442, 558, 706, 1029, 1506
SsiI	CCGC	2 cut(s)	848, 1316
SspMI	CTAG	6 cut(s)	530, 626, 755, 782, 1004, 1637
SstI	GAGCTC	1 cut(s)	408
StyD4I	CCNGG	5 cut(s)	127, 512, 656, 866, 1257
StyI	CCWWGG	2 cut(s)	186, 625
TaaI	ACNGT	1 cut(s)	594
TaiI	ACGT	3 cut(s)	136, 645, 1180
TaqI	TCGA	2 cut(s)	1150, 1483
TasI	AATT	7 cut(s)	10, 327, 442, 558, 706, 1029, 1506
TatI	WGTACW	2 cut(s)	594, 751
TauI	GCSGC	1 cut(s)	851
TfiI	GAWTC	1 cut(s)	1054
Tru1I	TTAA	5 cut(s)	105, 336, 360, 705, 1359
Tru9I	TTAA	5 cut(s)	105, 336, 360, 705, 1359
TscAI	CASTG	4 cut(s)	597, 885, 1045, 1551
TseFI	GTSAC	3 cut(s)	568, 1207, 1345
TseI	GCWGC	7 cut(s)	842, 845, 1136, 1187, 1262, 1296, 1306
Tsp45I	GTSAC	3 cut(s)	568, 1207, 1345
TspDTI	ATGAA	6 cut(s)	17, 95, 799, 1009, 1106, 1111
TspRI	CASTG	4 cut(s)	597, 885, 1045, 1551
VneI	GTGCAC	2 cut(s)	477, 785
VpaK11BI	GGWCC	2 cut(s)	1270, 1623
VspI	ATTAAT	1 cut(s)	705
XapI	RAATTY	2 cut(s)	442, 1506
XceI	RCATGY	3 cut(s)	343, 529, 762
XmaJI	CCTAGG	1 cut(s)	625
XspI	CTAG	6 cut(s)	530, 626, 755, 782, 1004, 1637
ZrmI	AGTACT	1 cut(s)	753
Zsp2I	ATGCAT	4 cut(s)	178, 764, 1091, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.