Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005076

Physical Location & Seq

Genomic Coordinates Reverse (-)

50353043 .. 50355713

Gene Structure 2671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG282100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGAAGATTACTAGCTCATCCACTCTTGGAACTTCACCTGATAGGAAACAAACCCTGGACAGAAAGATTGATGGAGTTTCAGCCATGGAAAGTATTTCATATCTCCACCATGCCCCTACGACATTTCTCGGGTCTAGAGATGGAGATTATCCACCAACCAGAACCTTTAAGGATGCCAAGGACATATGTTTTGCAGAGACCGCAAAGCTTTGGACCATTGCAGGCCCCATTGCCTTTAACTTGTTGTGCTACTATGGTATTAACTCCTCCACAGCCATCTTTGTTGGACATATCGGAGACGTGGAGCTCTCTGCTGTTGCAATCTCTCTGAATGTCATCGGAAATTTCTCTTTTGGCTTCCTGTATGGTATGGCAAGTGCACTAGAAACACTATGTGGGCAGGCATTTGGTGCAGGGCAAGTAGGTCTGCTAGGAATTTACTTGCAACGCTCATGGATTATAATGACTATTGCGTGCTCCTGTTTACTGCCAATGTACATCTACGCAGCACCAGTCCTAAAGCTTCTTGGCCAAGACGAGAACATTGCAGATGTAGCCGGGAAATTATGTATCCAAATCATCCCTCAAATGTTTTCAATGGCCATCAACTTCCCAACCCAAAAGTTCTTGCAGGCACAGAGCAAAGTTTCATTTCTGTCACTGTTTGGTTTTGCAACTCTCGTATTACACATAGGACTCCTATGTGTCTTCCTCAAAGTTTTCGGTTGGGGAATGAGCAGCGCTGCTGCAGCATTTAATATCTCATCCTGGGCGATGACATTGGCTCAGGTGGTTTATATAGTTGGTTGGTGTAGAGATGGCTGGAAGGGATTGTCATGGTTAGCTTTCAAGGACTTATGGTCCTTTGCAAAACTCTCTGTAGCTTCAGCTATTATGCTTTGCCTAGAGATTTGGTATTTCATGACCATACTAGTTATCACTGGCCACCTTGACAATGCTGTTATTGCTGTTGGCTCCCTTGCAATATGCATGAATGTGAATGGCTGGGAAGCAATACTGTTTGTTGGGATCAATGTTGCGATAAGCGTTCGGGTCTCCAACGAGCTTGGATCAGCACATCCTAGAGCTGCAGAATACTCTGTCATTGTCGCCATCACCGAGGCTCTCCTTCTTGGGATTCTTTTCGGGGTGGTTATTATGGCTGCAAAGGACAATTTTGCCATCATCTTTACCAACAGCAAAGAGATGCAACAAGCCGTGTCTCGTATAGCTTTCCTCCTAAGTATTACAATGGTGATTAATAGTGTTCAGCACGTTATTTCAGGTGTTGCTGTTGGAGGAGGGTGGCAAGCTCTGGTGGCTTACATAAACTTATTTTGTTATTATATTGTTGGGCTACCTACTGGGTTTTTTCTTGGTTACCGAACAAGTATGAGAGTTGAGGGAATTTGGGTTGGTATGATATTTGGGACAGTTTTGCAGACACTCATCCTCTTGTACATCCTTTATAAAACCAACTGGATCAAGGAGGTTGAACAAGCTACAGAAAGAATTGAACAGTGGACTGAAGAAGAACTAGTAGAAATTGATCAAGAACACAGGATTGGACAAGAATTGAAGGTGGATCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

530

Amino Acids

58.14

Weight (kDa)

5.8

Isoelectric Point (pI)

27.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	76 - 233	1.7e-26	MatE
MatE	PF01554	296 - 457	2.5e-22	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00350
fragaria_vesca	FvH4_7g14750 FvH4_7g15820 FvH4_7g16700
malus_domestica	MD01G1066100.v1.1 MD07G1134500.v1.1
prunus_persica	Prupe.2G173200_v2.0.a1
pyrus_communis	pycom07g13180
rosa_chinensis	RchiOBHm_Chr1g0358621 RchiOBHm_Chr1g0359861
rosa_laevigata	RLG00000027848 RLG00000027940
rosa_multiflora	Rmu_sc0001609.1_g000022 Rmu_sc0003191.1_g000011
rosa_roxburghii	Rroxscaffold_4G00297750
rosa_rugosa	Rorug01G0250800 Rorug01G0262900 Rorug01G0263000 Rorug01G0273300
rosa_samantha	Rh1AG264700 Rh1AG278200 Rh1AG287400 Rh1CG248400 Rh1CG261600 Rh1CG270500 Rh1DG259800 Rh1DG282100
rosa_wichuraiana	Rw1G023420 Rw1G024690 Rw1G025520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	461, 1470
AciI	CCGC	1 cut(s)	201
AclWI	GGATC	3 cut(s)	1037, 1078, 1490
AcoI	YGGCCR	3 cut(s)	529, 600, 943
AcsI	RAATTY	3 cut(s)	343, 435, 1407
AcuI	CTGAAG	2 cut(s)	870, 1548
AdeI	CACNNNGTG	1 cut(s)	395
AfaI	GTAC	2 cut(s)	497, 1460
AfeI	AGCGCT	1 cut(s)	742
AgsI	TTSAA	5 cut(s)	597, 850, 1496, 1517, 1579
AhdI	GACNNNNNGTC	1 cut(s)	859
AhlI	ACTAGT	2 cut(s)	931, 1537
AjiI	CACGTC	1 cut(s)	301
AjnI	CCWGG	2 cut(s)	54, 767
AjuI	GAANNNNNNNTTGG	2 cut(s)	1548, 1580
Alw21I	GWGCWC	3 cut(s)	309, 382, 479
Alw26I	GTCTC	4 cut(s)	191, 291, 1060, 1227
Alw44I	GTGCAC	1 cut(s)	378
AlwI	GGATC	3 cut(s)	1037, 1078, 1490
Ama87I	CYCGRG	1 cut(s)	128
Aor51HI	AGCGCT	1 cut(s)	742
AoxI	GGCC	4 cut(s)	223, 529, 600, 943
ApaLI	GTGCAC	1 cut(s)	378
ApeKI	GCWGC	7 cut(s)	506, 738, 743, 746, 749, 1088, 1163
ApoI	RAATTY	3 cut(s)	343, 435, 1407
ArsI	GACNNNNNNTTYG	2 cut(s)	173, 205
AseI	ATTAAT	1 cut(s)	1260
AspLEI	GCGC	1 cut(s)	743
AspS9I	GGNCC	3 cut(s)	213, 224, 861
AsuC2I	CCSGG	1 cut(s)	559
AsuHPI	GGTGA	3 cut(s)	27, 1108, 1267
AvaI	CYCGRG	1 cut(s)	128
AvaII	GGWCC	2 cut(s)	213, 861
BaeGI	GKGCMC	1 cut(s)	382
BalI	TGGCCA	3 cut(s)	531, 602, 945
BanII	GRGCYC	1 cut(s)	309
BbsI	GAAGAC	1 cut(s)	700
Bbv12I	GWGCWC	3 cut(s)	309, 382, 479
BbvI	GCAGC	7 cut(s)	518, 730, 733, 750, 761, 1075, 1150
BccI	CCATC	7 cut(s)	65, 134, 284, 611, 812, 1121, 1190
BceAI	ACGGC	1 cut(s)	1202
BcgI	CGANNNNNNTGC	2 cut(s)	527, 561
BciT130I	CCWGG	2 cut(s)	56, 769
BciVI	GTATCC	1 cut(s)	581
BclI	TGATCA	1 cut(s)	1549
BcnI	CCSGG	1 cut(s)	559
BcoDI	GTCTC	4 cut(s)	191, 291, 1060, 1227
BcuI	ACTAGT	2 cut(s)	931, 1537
BfaI	CTAG	8 cut(s)	12, 135, 383, 431, 905, 932, 1083, 1538
BfmI	CTRYAG	4 cut(s)	747, 879, 1089, 1503
BfoI	RGCGCY	1 cut(s)	744
BfuI	GTATCC	1 cut(s)	581
BisI	GCNGC	7 cut(s)	507, 739, 744, 747, 750, 1089, 1164
BlsI	GCNGC	7 cut(s)	508, 740, 745, 748, 751, 1090, 1165
Bme1390I	CCNGG	3 cut(s)	56, 559, 769
Bme18I	GGWCC	2 cut(s)	213, 861
BmeRI	GACNNNNNGTC	1 cut(s)	859
BmeT110I	CYCGRG	1 cut(s)	128
BmgBI	CACGTC	1 cut(s)	301
BmgT120I	GGNCC	3 cut(s)	213, 224, 861
BmiI	GGNNCC	2 cut(s)	226, 976
BmrFI	CCNGG	3 cut(s)	56, 559, 769
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	2 cut(s)	163, 1197
BmuI	ACTGGG	1 cut(s)	1374
BpiI	GAAGAC	1 cut(s)	700
Bpu10I	CCTNAGC	1 cut(s)	786
BpuMI	CCSGG	1 cut(s)	559
BsaI	GGTCTC	2 cut(s)	191, 1060
BsaJI	CCNNGG	5 cut(s)	54, 84, 177, 768, 1119
Bse1I	ACTGG	4 cut(s)	512, 946, 1369, 1484
Bse3DI	GCAATG	3 cut(s)	216, 228, 543
BseBI	CCWGG	2 cut(s)	56, 769
BseDI	CCNNGG	5 cut(s)	54, 84, 177, 768, 1119
BseGI	GGATG	7 cut(s)	17, 178, 579, 764, 1078, 1449, 1461
BseMI	GCAATG	3 cut(s)	216, 228, 543
BseMII	CTCAG	1 cut(s)	800
BseNI	ACTGG	4 cut(s)	512, 946, 1369, 1484
BseRI	GAGGAG	2 cut(s)	256, 1314
BseSI	GKGCMC	1 cut(s)	382
BseXI	GCAGC	7 cut(s)	518, 730, 733, 750, 761, 1075, 1150
BseYI	CCCAGC	1 cut(s)	1005
BsgI	GTGCAG	1 cut(s)	432
BshFI	GGCC	4 cut(s)	225, 531, 602, 945
BsiHKAI	GWGCWC	3 cut(s)	309, 382, 479
BsiHKCI	CYCGRG	1 cut(s)	128
BsiSI	CCGG	1 cut(s)	558
BslFI	GGGAC	1 cut(s)	1444
BsmAI	GTCTC	4 cut(s)	191, 291, 1060, 1227
BsmBI	CGTCTC	1 cut(s)	291
BsmFI	GGGAC	1 cut(s)	1444
BsnI	GGCC	4 cut(s)	225, 531, 602, 945
Bso31I	GGTCTC	2 cut(s)	191, 1060
BsoBI	CYCGRG	1 cut(s)	128
Bsp1286I	GDGCHC	3 cut(s)	309, 382, 479
Bsp1407I	TGTACA	2 cut(s)	495, 1458
Bsp143I	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
Bsp19I	CCATGG	1 cut(s)	84
BspACI	CCGC	1 cut(s)	201
BspANI	GGCC	4 cut(s)	225, 531, 602, 945
BspCNI	CTCAG	1 cut(s)	799
BspHI	TCATGA	1 cut(s)	921
BspLI	GGNNCC	2 cut(s)	226, 976
BspMAI	CTGCAG	2 cut(s)	751, 1093
BspPI	GGATC	3 cut(s)	1037, 1078, 1490
BspTNI	GGTCTC	2 cut(s)	191, 1060
BsrDI	GCAATG	3 cut(s)	216, 228, 543
BsrGI	TGTACA	2 cut(s)	495, 1458
BsrI	ACTGG	4 cut(s)	512, 946, 1369, 1484
BssECI	CCNNGG	5 cut(s)	54, 84, 177, 768, 1119
BssMI	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
BssT1I	CCWWGG	2 cut(s)	84, 177
Bst2UI	CCWGG	2 cut(s)	56, 769
Bst4CI	ACNGT	4 cut(s)	663, 1020, 1435, 1521
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstAUI	TGTACA	2 cut(s)	495, 1458
BstC8I	GCNNGC	5 cut(s)	223, 402, 475, 633, 1311
BstDEI	CTNAG	2 cut(s)	786, 1241
BstDSI	CCRYGG	1 cut(s)	84
BstEII	GGTNACC	1 cut(s)	1379
BstF5I	GGATG	7 cut(s)	17, 178, 579, 764, 1078, 1449, 1461
BstH2I	RGCGCY	1 cut(s)	744
BstHHI	GCGC	1 cut(s)	743
BstKTI	GATC	5 cut(s)	1032, 1073, 1485, 1552, 1588
BstMAI	GTCTC	4 cut(s)	191, 291, 1060, 1227
BstMBI	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
BstMWI	GCNNNNNNNGC	6 cut(s)	200, 410, 554, 749, 965, 1319
BstNI	CCWGG	2 cut(s)	56, 769
BstPI	GGTNACC	1 cut(s)	1379
BstSCI	CCNGG	3 cut(s)	54, 557, 767
BstSFI	CTRYAG	4 cut(s)	747, 879, 1089, 1503
BstSLI	GKGCMC	1 cut(s)	382
BstV1I	GCAGC	7 cut(s)	518, 730, 733, 750, 761, 1075, 1150
BstV2I	GAAGAC	1 cut(s)	700
BstX2I	RGATCY	1 cut(s)	1585
BstYI	RGATCY	1 cut(s)	1585
BsuI	GTATCC	1 cut(s)	581
BsuRI	GGCC	4 cut(s)	225, 531, 602, 945
BtgI	CCRYGG	1 cut(s)	84
BtgZI	GCGATG	1 cut(s)	788
BtrI	CACGTC	1 cut(s)	301
BtsCI	GGATG	7 cut(s)	17, 178, 579, 764, 1078, 1449, 1461
BtsIMutI	CAGTG	3 cut(s)	659, 939, 1526
Cac8I	GCNNGC	5 cut(s)	223, 402, 475, 633, 1311
CciI	TCATGA	1 cut(s)	921
CfoI	GCGC	1 cut(s)	743
Cfr13I	GGNCC	3 cut(s)	213, 224, 861
Csp6I	GTAC	2 cut(s)	496, 1459
CviAII	CATG	6 cut(s)	85, 110, 453, 837, 922, 991
CviQI	GTAC	2 cut(s)	496, 1459
DdeI	CTNAG	2 cut(s)	786, 1241
DpnI	GATC	5 cut(s)	1031, 1072, 1484, 1551, 1587
DpnII	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
DraIII	CACNNNGTG	1 cut(s)	395
DriI	GACNNNNNGTC	1 cut(s)	859
EaeI	YGGCCR	3 cut(s)	529, 600, 943
Eam1105I	GACNNNNNGTC	1 cut(s)	859
Ecl136II	GAGCTC	1 cut(s)	307
Eco130I	CCWWGG	2 cut(s)	84, 177
Eco24I	GRGCYC	1 cut(s)	309
Eco31I	GGTCTC	2 cut(s)	191, 1060
Eco47I	GGWCC	2 cut(s)	213, 861
Eco47III	AGCGCT	1 cut(s)	742
Eco53kI	GAGCTC	1 cut(s)	307
Eco57I	CTGAAG	2 cut(s)	870, 1548
Eco88I	CYCGRG	1 cut(s)	128
Eco91I	GGTNACC	1 cut(s)	1379
EcoICRI	GAGCTC	1 cut(s)	307
EcoO109I	RGGNCCY	1 cut(s)	224
EcoO65I	GGTNACC	1 cut(s)	1379
EcoRII	CCWGG	2 cut(s)	54, 767
EcoT14I	CCWWGG	2 cut(s)	84, 177
EcoT22I	ATGCAT	1 cut(s)	992
EcoT38I	GRGCYC	1 cut(s)	309
ErhI	CCWWGG	2 cut(s)	84, 177
Esp3I	CGTCTC	1 cut(s)	291
FaeI	CATG	6 cut(s)	88, 113, 456, 840, 925, 994
FaqI	GGGAC	1 cut(s)	1444
FatI	CATG	6 cut(s)	84, 109, 452, 836, 921, 990
FauNDI	CATATG	1 cut(s)	185
FbaI	TGATCA	1 cut(s)	1549
Fnu4HI	GCNGC	7 cut(s)	507, 739, 744, 747, 750, 1089, 1164
FokI	GGATG	7 cut(s)	4, 185, 566, 751, 1065, 1436, 1448
FriOI	GRGCYC	1 cut(s)	309
Fsp4HI	GCNGC	7 cut(s)	507, 739, 744, 747, 750, 1089, 1164
FspBI	CTAG	8 cut(s)	12, 135, 383, 431, 905, 932, 1083, 1538
GlaI	GCGC	1 cut(s)	742
GluI	GCNGC	7 cut(s)	507, 739, 744, 747, 750, 1089, 1164
GsaI	CCCAGC	1 cut(s)	1009
HaeII	RGCGCY	1 cut(s)	744
HaeIII	GGCC	4 cut(s)	225, 531, 602, 945
HapII	CCGG	1 cut(s)	558
HhaI	GCGC	1 cut(s)	743
Hin1II	CATG	6 cut(s)	88, 113, 456, 840, 925, 994
Hin6I	GCGC	1 cut(s)	741
HinP1I	GCGC	1 cut(s)	741
HindIII	AAGCTT	2 cut(s)	206, 521
HinfI	GANTC	2 cut(s)	696, 1138
HpaII	CCGG	1 cut(s)	558
HphI	GGTGA	3 cut(s)	27, 1108, 1267
Hpy166II	GTNNAC	3 cut(s)	380, 485, 1524
Hpy188I	TCNGA	3 cut(s)	296, 330, 341
Hpy188III	TCNNGA	3 cut(s)	135, 922, 1553
Hpy8I	GTNNAC	3 cut(s)	380, 485, 1524
HpyAV	CCTTC	3 cut(s)	820, 1139, 1573
HpyCH4III	ACNGT	4 cut(s)	663, 1020, 1435, 1521
HpyCH4IV	ACGT	2 cut(s)	300, 1275
HpyF10VI	GCNNNNNNNGC	6 cut(s)	200, 410, 554, 749, 965, 1319
HpyF3I	CTNAG	2 cut(s)	786, 1241
HpySE526I	ACGT	2 cut(s)	300, 1275
Hsp92II	CATG	6 cut(s)	88, 113, 456, 840, 925, 994
HspAI	GCGC	1 cut(s)	741
Ksp22I	TGATCA	1 cut(s)	1549
Kzo9I	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
LmnI	GCTCC	3 cut(s)	304, 482, 980
Lsp1109I	GCAGC	7 cut(s)	518, 730, 733, 750, 761, 1075, 1150
LweI	GCATC	2 cut(s)	163, 1197
MaeI	CTAG	8 cut(s)	12, 135, 383, 431, 905, 932, 1083, 1538
MaeII	ACGT	2 cut(s)	300, 1275
MaeIII	GTNAC	2 cut(s)	657, 1379
MalI	GATC	5 cut(s)	1031, 1072, 1484, 1551, 1587
MboI	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
MboII	GAAGA	4 cut(s)	16, 700, 1541, 1544
MflI	RGATCY	1 cut(s)	1585
MhlI	GDGCHC	3 cut(s)	309, 382, 479
MlsI	TGGCCA	3 cut(s)	531, 602, 945
MluCI	AATT	8 cut(s)	343, 435, 563, 1174, 1407, 1512, 1545, 1574
MluNI	TGGCCA	3 cut(s)	531, 602, 945
MlyI	GAGTC	1 cut(s)	690
MmeI	TCCRAC	3 cut(s)	265, 1083, 1276
Mox20I	TGGCCA	3 cut(s)	531, 602, 945
Mph1103I	ATGCAT	1 cut(s)	992
MscI	TGGCCA	3 cut(s)	531, 602, 945
MseI	TTAA	5 cut(s)	168, 237, 261, 756, 1260
MslI	CAYNNNNRTG	1 cut(s)	995
Msp20I	TGGCCA	3 cut(s)	531, 602, 945
MspI	CCGG	1 cut(s)	558
MspR9I	CCNGG	3 cut(s)	56, 559, 769
MvaI	CCWGG	2 cut(s)	56, 769
MwoI	GCNNNNNNNGC	6 cut(s)	200, 410, 554, 749, 965, 1319
NciI	CCSGG	1 cut(s)	559
NcoI	CCATGG	1 cut(s)	84
NdeI	CATATG	1 cut(s)	185
NdeII	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
NlaIII	CATG	6 cut(s)	88, 113, 456, 840, 925, 994
NlaIV	GGNNCC	2 cut(s)	226, 976
NmuCI	GTSAC	1 cut(s)	657
NsiI	ATGCAT	1 cut(s)	992
PagI	TCATGA	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	1116
PfeI	GAWTC	1 cut(s)	1138
PkrI	GCNGC	7 cut(s)	508, 740, 745, 748, 751, 1090, 1165
PleI	GAGTC	1 cut(s)	690
PpsI	GAGTC	1 cut(s)	690
PshBI	ATTAAT	1 cut(s)	1260
PsiI	TTATAA	2 cut(s)	461, 1470
Psp124BI	GAGCTC	1 cut(s)	309
Psp6I	CCWGG	2 cut(s)	54, 767
PspEI	GGTNACC	1 cut(s)	1379
PspFI	CCCAGC	1 cut(s)	1005
PspGI	CCWGG	2 cut(s)	54, 767
PspN4I	GGNNCC	2 cut(s)	226, 976
PspPI	GGNCC	3 cut(s)	213, 224, 861
PstI	CTGCAG	2 cut(s)	751, 1093
PsuI	RGATCY	1 cut(s)	1585
RsaI	GTAC	2 cut(s)	497, 1460
RsaNI	GTAC	2 cut(s)	496, 1459
RseI	CAYNNNNRTG	1 cut(s)	995
SacI	GAGCTC	1 cut(s)	309
SaqAI	TTAA	5 cut(s)	168, 237, 261, 756, 1260
SatI	GCNGC	7 cut(s)	507, 739, 744, 747, 750, 1089, 1164
Sau3AI	GATC	5 cut(s)	1029, 1070, 1482, 1549, 1585
Sau96I	GGNCC	3 cut(s)	213, 224, 861
SchI	GAGTC	1 cut(s)	690
ScrFI	CCNGG	3 cut(s)	56, 559, 769
SduI	GDGCHC	3 cut(s)	309, 382, 479
SfaNI	GCATC	2 cut(s)	163, 1197
SfcI	CTRYAG	4 cut(s)	747, 879, 1089, 1503
SinI	GGWCC	2 cut(s)	213, 861
SmiMI	CAYNNNNRTG	1 cut(s)	995
SpeI	ACTAGT	2 cut(s)	931, 1537
Sse9I	AATT	8 cut(s)	343, 435, 563, 1174, 1407, 1512, 1545, 1574
SsiI	CCGC	1 cut(s)	201
SspMI	CTAG	8 cut(s)	12, 135, 383, 431, 905, 932, 1083, 1538
SstI	GAGCTC	1 cut(s)	309
StyD4I	CCNGG	3 cut(s)	54, 557, 767
StyI	CCWWGG	2 cut(s)	84, 177
TaaI	ACNGT	4 cut(s)	663, 1020, 1435, 1521
TaiI	ACGT	2 cut(s)	303, 1278
TasI	AATT	8 cut(s)	343, 435, 563, 1174, 1407, 1512, 1545, 1574
TatI	WGTACW	2 cut(s)	495, 1458
TfiI	GAWTC	1 cut(s)	1138
Tru1I	TTAA	5 cut(s)	168, 237, 261, 756, 1260
Tru9I	TTAA	5 cut(s)	168, 237, 261, 756, 1260
TscAI	CASTG	3 cut(s)	666, 946, 1526
TseFI	GTSAC	1 cut(s)	657
TseI	GCWGC	7 cut(s)	506, 738, 743, 746, 749, 1088, 1163
Tsp45I	GTSAC	1 cut(s)	657
TspDTI	ATGAA	5 cut(s)	17, 87, 639, 910, 1007
TspRI	CASTG	3 cut(s)	666, 946, 1526
VneI	GTGCAC	1 cut(s)	378
VpaK11BI	GGWCC	2 cut(s)	213, 861
VspI	ATTAAT	1 cut(s)	1260
XapI	RAATTY	3 cut(s)	343, 435, 1407
XbaI	TCTAGA	1 cut(s)	134
XspI	CTAG	8 cut(s)	12, 135, 383, 431, 905, 932, 1083, 1538
Zsp2I	ATGCAT	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.