RLG00000030351

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
59928657 .. 59929334
678 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030351

Sequence Viewer

Length: 327 bp
ATGTTAAAAAAAAAAAAAAAACTGGAGATATATTTTTATATCATATCAACATATACTATCATTTTTTACTTCTTCTCTGACTCCCAAAGTCGCCGTCTTGTTCTTTGCCAACAATCATCATCATCTCATTCATCCGCAATCATCATCATCTTCCCCATCTCCACTTCTCTAGATTCCAAAATCCCAAATTCTCCCATCTCAAATCTAACAGGTAATTCATCATCAAAGTCTCAATTTCTCCCCCTTCTATTTCATCATCTGCAATCATCATCAAAGTCTCAATTTCTTGTTCTTCATATGTTCGTTGTTTTTTATTGGTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

109

Amino Acids

12.54

Weight (kDa)

9.81

Isoelectric Point (pI)

67.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 135
AcsI RAATTY 1 cut(s) 187
Alw26I GTCTC 2 cut(s) 234, 282
ApoI RAATTY 1 cut(s) 187
ArsI GACNNNNNNTTYG 2 cut(s) 79, 111
BccI CCATC 2 cut(s) 164, 203
BceAI ACGGC 1 cut(s) 78
BcoDI GTCTC 2 cut(s) 234, 282
BfaI CTAG 1 cut(s) 170
BpmI CTGGAG 1 cut(s) 44
Bse1I ACTGG 1 cut(s) 27
BseGI GGATG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 27
BsmAI GTCTC 2 cut(s) 234, 282
BspACI CCGC 1 cut(s) 135
BsrI ACTGG 1 cut(s) 27
BstF5I GGATG 1 cut(s) 131
BstMAI GTCTC 2 cut(s) 234, 282
BtsCI GGATG 1 cut(s) 131
FaiI YATR 7 cut(s) 31, 39, 44, 52, 54, 297, 299
FauNDI CATATG 1 cut(s) 297
FokI GGATG 1 cut(s) 118
FspBI CTAG 1 cut(s) 170
GsuI CTGGAG 1 cut(s) 44
HinfI GANTC 2 cut(s) 80, 173
Hpy188I TCNGA 2 cut(s) 79, 326
Hpy188III TCNNGA 1 cut(s) 170
HpyAV CCTTC 1 cut(s) 254
HpyCH4V TGCA 1 cut(s) 262
LpnPI CCDG 2 cut(s) 8, 195
MaeI CTAG 1 cut(s) 170
MboII GAAGA 3 cut(s) 64, 142, 284
MluCI AATT 4 cut(s) 187, 214, 233, 281
MlyI GAGTC 1 cut(s) 74
MseI TTAA 1 cut(s) 5
NdeI CATATG 1 cut(s) 297
PfeI GAWTC 1 cut(s) 173
PleI GAGTC 1 cut(s) 74
PpsI GAGTC 1 cut(s) 74
SaqAI TTAA 1 cut(s) 5
SchI GAGTC 1 cut(s) 74
SetI ASST 1 cut(s) 214
SgeI CNNG 5 cut(s) 35, 110, 182, 222, 299
Sse9I AATT 4 cut(s) 187, 214, 233, 281
SsiI CCGC 1 cut(s) 135
SspMI CTAG 1 cut(s) 170
TasI AATT 4 cut(s) 187, 214, 233, 281
TfiI GAWTC 1 cut(s) 173
Tru1I TTAA 1 cut(s) 5
Tru9I TTAA 1 cut(s) 5
TspDTI ATGAA 4 cut(s) 120, 207, 242, 284
XapI RAATTY 1 cut(s) 187
XbaI TCTAGA 1 cut(s) 169
XspI CTAG 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.