No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0227751 |
| rosa_laevigata | RLG00000001624 RLG00000030351 |
| rosa_multiflora | Rmu_sc0014985.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433810 Rroxscaffold_1G00023370 Rroxscaffold_1G00023380 Rroxscaffold_1G00035890 Rroxscaffold_2G00123370 Rroxscaffold_3G00233000 Rroxscaffold_5G00350540 Rroxscaffold_5G00352460 Rroxscaffold_5G00371070 Rroxscaffold_6G00397330 Rroxscaffold_7G00191060 Rroxscaffold_7G00194560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 60 |
| AclWI | GGATC | 2 cut(s) | 127, 162 |
| AcsI | RAATTY | 1 cut(s) | 227 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 65 |
| AflIII | ACRYGT | 1 cut(s) | 84 |
| AgsI | TTSAA | 2 cut(s) | 204, 233 |
| AluBI | AGCT | 1 cut(s) | 164 |
| AluI | AGCT | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 1 cut(s) | 166 |
| AlwI | GGATC | 2 cut(s) | 127, 162 |
| AoxI | GGCC | 1 cut(s) | 185 |
| ApoI | RAATTY | 1 cut(s) | 227 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 50 |
| AsuHPI | GGTGA | 2 cut(s) | 149, 162 |
| BanII | GRGCYC | 1 cut(s) | 166 |
| Bbv12I | GWGCWC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 125 |
| BfaI | CTAG | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 65 |
| BseGI | GGATG | 1 cut(s) | 81 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BshFI | GGCC | 1 cut(s) | 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 65 |
| BsnI | GGCC | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 1 cut(s) | 166 |
| Bsp143I | GATC | 2 cut(s) | 119, 154 |
| BspACI | CCGC | 1 cut(s) | 60 |
| BspANI | GGCC | 1 cut(s) | 187 |
| BspPI | GGATC | 2 cut(s) | 127, 162 |
| BssMI | GATC | 2 cut(s) | 119, 154 |
| Bst4CI | ACNGT | 1 cut(s) | 149 |
| BstEII | GGTNACC | 1 cut(s) | 168 |
| BstF5I | GGATG | 1 cut(s) | 81 |
| BstKTI | GATC | 2 cut(s) | 122, 157 |
| BstMBI | GATC | 2 cut(s) | 119, 154 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstPI | GGTNACC | 1 cut(s) | 168 |
| BsuRI | GGCC | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 81 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 177, 212 |
| CviAII | CATG | 1 cut(s) | 85 |
| CviJI | RGCY | 3 cut(s) | 57, 164, 187 |
| CviKI_1 | RGCY | 3 cut(s) | 57, 164, 187 |
| CviQI | GTAC | 1 cut(s) | 220 |
| DpnI | GATC | 2 cut(s) | 121, 156 |
| DpnII | GATC | 2 cut(s) | 119, 154 |
| Ecl136II | GAGCTC | 1 cut(s) | 164 |
| Eco24I | GRGCYC | 1 cut(s) | 166 |
| Eco32I | GATATC | 1 cut(s) | 18 |
| Eco53kI | GAGCTC | 1 cut(s) | 164 |
| Eco91I | GGTNACC | 1 cut(s) | 168 |
| EcoICRI | GAGCTC | 1 cut(s) | 164 |
| EcoO65I | GGTNACC | 1 cut(s) | 168 |
| EcoRV | GATATC | 1 cut(s) | 18 |
| EcoT38I | GRGCYC | 1 cut(s) | 166 |
| FaeI | CATG | 1 cut(s) | 88 |
| FaiI | YATR | 1 cut(s) | 86 |
| FatI | CATG | 1 cut(s) | 84 |
| FauI | CCCGC | 1 cut(s) | 67 |
| FokI | GGATG | 1 cut(s) | 88 |
| FriOI | GRGCYC | 1 cut(s) | 166 |
| FspBI | CTAG | 1 cut(s) | 90 |
| HaeIII | GGCC | 1 cut(s) | 187 |
| Hin1II | CATG | 1 cut(s) | 88 |
| HphI | GGTGA | 2 cut(s) | 149, 162 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 222 |
| Hpy188I | TCNGA | 1 cut(s) | 124 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 222 |
| HpyAV | CCTTC | 1 cut(s) | 110 |
| HpyCH4III | ACNGT | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 1 cut(s) | 39 |
| Hsp92II | CATG | 1 cut(s) | 88 |
| Kzo9I | GATC | 2 cut(s) | 119, 154 |
| LpnPI | CCDG | 2 cut(s) | 80, 169 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeIII | GTNAC | 2 cut(s) | 143, 168 |
| MalI | GATC | 2 cut(s) | 121, 156 |
| MboI | GATC | 2 cut(s) | 119, 154 |
| MboII | GAAGA | 1 cut(s) | 91 |
| MhlI | GDGCHC | 1 cut(s) | 166 |
| MluCI | AATT | 3 cut(s) | 99, 177, 227 |
| MnlI | CCTC | 3 cut(s) | 122, 254, 260 |
| MroXI | GAANNNNTTC | 1 cut(s) | 50 |
| NdeII | GATC | 2 cut(s) | 119, 154 |
| NlaIII | CATG | 1 cut(s) | 88 |
| NmuCI | GTSAC | 2 cut(s) | 143, 168 |
| NspI | RCATGY | 1 cut(s) | 88 |
| PciI | ACATGT | 1 cut(s) | 84 |
| PdmI | GAANNNNTTC | 1 cut(s) | 50 |
| PscI | ACATGT | 1 cut(s) | 84 |
| Psp124BI | GAGCTC | 1 cut(s) | 166 |
| PspEI | GGTNACC | 1 cut(s) | 168 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| SacI | GAGCTC | 1 cut(s) | 166 |
| Sau3AI | GATC | 2 cut(s) | 119, 154 |
| SduI | GDGCHC | 1 cut(s) | 166 |
| SetI | ASST | 1 cut(s) | 166 |
| Sse9I | AATT | 3 cut(s) | 99, 177, 227 |
| SsiI | CCGC | 1 cut(s) | 60 |
| SspMI | CTAG | 1 cut(s) | 90 |
| SstI | GAGCTC | 1 cut(s) | 166 |
| TaaI | ACNGT | 1 cut(s) | 149 |
| TaqI | TCGA | 2 cut(s) | 114, 238 |
| TaqII | GACCGA | 1 cut(s) | 156 |
| TasI | AATT | 3 cut(s) | 99, 177, 227 |
| TseFI | GTSAC | 2 cut(s) | 143, 168 |
| Tsp45I | GTSAC | 2 cut(s) | 143, 168 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 227 |
| XceI | RCATGY | 1 cut(s) | 88 |
| XmnI | GAANNNNTTC | 1 cut(s) | 50 |
| XspI | CTAG | 1 cut(s) | 90 |