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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0227751 |
| rosa_laevigata | RLG00000001624 RLG00000030351 |
| rosa_multiflora | Rmu_sc0014985.1_g000001 |
| rosa_roxburghii | Rroxscaffold_160G00433810 Rroxscaffold_1G00023370 Rroxscaffold_1G00023380 Rroxscaffold_1G00035890 Rroxscaffold_2G00123370 Rroxscaffold_3G00233000 Rroxscaffold_5G00350540 Rroxscaffold_5G00352460 Rroxscaffold_5G00371070 Rroxscaffold_6G00397330 Rroxscaffold_7G00191060 Rroxscaffold_7G00194560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 82, 116 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcsI | RAATTY | 2 cut(s) | 156, 192 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 53, 71 |
| AgsI | TTSAA | 2 cut(s) | 170, 181 |
| AjnI | CCWGG | 1 cut(s) | 273 |
| AluBI | AGCT | 2 cut(s) | 118, 267 |
| AluI | AGCT | 2 cut(s) | 118, 267 |
| Alw21I | GWGCWC | 1 cut(s) | 120 |
| AlwI | GGATC | 2 cut(s) | 82, 116 |
| AoxI | GGCC | 1 cut(s) | 121 |
| ApoI | RAATTY | 2 cut(s) | 156, 192 |
| AspS9I | GGNCC | 1 cut(s) | 43 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| AvaII | GGWCC | 1 cut(s) | 43 |
| BanII | GRGCYC | 1 cut(s) | 120 |
| Bbv12I | GWGCWC | 1 cut(s) | 120 |
| BccI | CCATC | 1 cut(s) | 80 |
| BciT130I | CCWGG | 1 cut(s) | 275 |
| BfaI | CTAG | 2 cut(s) | 198, 212 |
| Bme1390I | CCNGG | 1 cut(s) | 275 |
| Bme18I | GGWCC | 1 cut(s) | 43 |
| BmgT120I | GGNCC | 1 cut(s) | 43 |
| BmiI | GGNNCC | 1 cut(s) | 45 |
| BmrFI | CCNGG | 1 cut(s) | 275 |
| BmsI | GCATC | 2 cut(s) | 241, 269 |
| BpuEI | CTTGAG | 1 cut(s) | 238 |
| BsaJI | CCNNGG | 1 cut(s) | 274 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 53, 71 |
| BseBI | CCWGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 1 cut(s) | 274 |
| BseGI | GGATG | 1 cut(s) | 284 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 53, 71 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BsiHKAI | GWGCWC | 1 cut(s) | 120 |
| BslFI | GGGAC | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 53, 71 |
| BsmFI | GGGAC | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp143I | GATC | 3 cut(s) | 74, 108, 163 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BspLI | GGNNCC | 1 cut(s) | 45 |
| BspPI | GGATC | 2 cut(s) | 82, 116 |
| BssECI | CCNNGG | 1 cut(s) | 274 |
| BssMI | GATC | 3 cut(s) | 74, 108, 163 |
| Bst2UI | CCWGG | 1 cut(s) | 275 |
| Bst4CI | ACNGT | 1 cut(s) | 103 |
| BstC8I | GCNNGC | 1 cut(s) | 230 |
| BstDEI | CTNAG | 1 cut(s) | 67 |
| BstF5I | GGATG | 1 cut(s) | 284 |
| BstKTI | GATC | 3 cut(s) | 77, 111, 166 |
| BstMBI | GATC | 3 cut(s) | 74, 108, 163 |
| BstNI | CCWGG | 1 cut(s) | 275 |
| BstSCI | CCNGG | 1 cut(s) | 273 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BtsCI | GGATG | 1 cut(s) | 284 |
| Cac8I | GCNNGC | 1 cut(s) | 230 |
| Cfr13I | GGNCC | 1 cut(s) | 43 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 131, 166 |
| CviJI | RGCY | 4 cut(s) | 118, 123, 215, 267 |
| CviKI_1 | RGCY | 4 cut(s) | 118, 123, 215, 267 |
| DdeI | CTNAG | 1 cut(s) | 67 |
| DpnI | GATC | 3 cut(s) | 76, 110, 165 |
| DpnII | GATC | 3 cut(s) | 74, 108, 163 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Ecl136II | GAGCTC | 1 cut(s) | 118 |
| Eco24I | GRGCYC | 1 cut(s) | 120 |
| Eco47I | GGWCC | 1 cut(s) | 43 |
| Eco53kI | GAGCTC | 1 cut(s) | 118 |
| EcoICRI | GAGCTC | 1 cut(s) | 118 |
| EcoRII | CCWGG | 1 cut(s) | 273 |
| EcoT38I | GRGCYC | 1 cut(s) | 120 |
| FaiI | YATR | 3 cut(s) | 27, 208, 270 |
| FaqI | GGGAC | 1 cut(s) | 29 |
| FriOI | GRGCYC | 1 cut(s) | 120 |
| FspBI | CTAG | 2 cut(s) | 198, 212 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 1 cut(s) | 167 |
| HpyAV | CCTTC | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 1 cut(s) | 232 |
| HpyF3I | CTNAG | 1 cut(s) | 67 |
| Kzo9I | GATC | 3 cut(s) | 74, 108, 163 |
| LpnPI | CCDG | 2 cut(s) | 260, 287 |
| LweI | GCATC | 2 cut(s) | 241, 269 |
| MaeI | CTAG | 2 cut(s) | 198, 212 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MalI | GATC | 3 cut(s) | 76, 110, 165 |
| MboI | GATC | 3 cut(s) | 74, 108, 163 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MluCI | AATT | 5 cut(s) | 10, 156, 176, 186, 192 |
| MseI | TTAA | 1 cut(s) | 189 |
| MspR9I | CCNGG | 1 cut(s) | 275 |
| MvaI | CCWGG | 1 cut(s) | 275 |
| NdeII | GATC | 3 cut(s) | 74, 108, 163 |
| NlaIV | GGNNCC | 1 cut(s) | 45 |
| NmeAIII | GCCGAG | 1 cut(s) | 99 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| Psp124BI | GAGCTC | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 273 |
| PspGI | CCWGG | 1 cut(s) | 273 |
| PspN4I | GGNNCC | 1 cut(s) | 45 |
| PspPI | GGNCC | 1 cut(s) | 43 |
| SacI | GAGCTC | 1 cut(s) | 120 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| Sau3AI | GATC | 3 cut(s) | 74, 108, 163 |
| Sau96I | GGNCC | 1 cut(s) | 43 |
| ScrFI | CCNGG | 1 cut(s) | 275 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SetI | ASST | 4 cut(s) | 120, 213, 269, 293 |
| SfaNI | GCATC | 2 cut(s) | 241, 269 |
| SinI | GGWCC | 1 cut(s) | 43 |
| SmlI | CTYRAG | 1 cut(s) | 217 |
| SmoI | CTYRAG | 1 cut(s) | 217 |
| Sse9I | AATT | 5 cut(s) | 10, 156, 176, 186, 192 |
| SspMI | CTAG | 2 cut(s) | 198, 212 |
| SstI | GAGCTC | 1 cut(s) | 120 |
| StyD4I | CCNGG | 1 cut(s) | 273 |
| TaaI | ACNGT | 1 cut(s) | 103 |
| TaqI | TCGA | 1 cut(s) | 258 |
| TasI | AATT | 5 cut(s) | 10, 156, 176, 186, 192 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| VpaK11BI | GGWCC | 1 cut(s) | 43 |
| XapI | RAATTY | 2 cut(s) | 156, 192 |
| XspI | CTAG | 2 cut(s) | 198, 212 |