RLG00000030608

STELLO glycosyltransferases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0002600
Physical Location & Seq
Reverse (-)
64369488 .. 64373034
3547 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030608

Sequence Viewer

Length: 2298 bp
ATGTTGGTCCAAGACCGCTCAATCCCAAAACCAACCTCCAAACCCCACCAACTCTTTCTCAACAATCACTTCCTTCAACCAAAAACCTTTGTCTTCCCCAAATGGCTCTCCTTCAACCTCTTCAAGATCGCCACCATTTCATTCCTAGCCTTCACCATTGCCGCCCTCTTCTTCCTCTACACCAACAATGACTCCCCCACCACCTTCCTCTGTTTCAACTCCAAATCCCACTCCAAGATCCCCACACCCATTGAACTCCCCAGAATCAACTTCAACTCCATCCCACCCATTTCAGATAAGTCCTCCAACTTCGCTTCTTTCACCTCAGACAGATGGATTGTGGTCTCTGTTTCGGATCTTCCATCGGATTCGCTTCGAAAACTGGTCAGGATCAATGGCTGGCAAGTCCTTGCAATAGGGAATTCGAAGACTCCATTGGATTGGAGCCTCAAGGGAGCTATATACTTGTCAATGGAGGACCAAGCTAAGCTGGAGTTTCGTGTTTTGGAGTATCTTCCTTACGAGTCTCATCTAAGGAAGAGTGTTGGGTACCTTTTCGCCATTCAACATGGGGCGAAAATGATATTCGATGCTGATGATCGTGGTGAAGTGGTTGACGGTGATCTTGGGAAGCACTTTGATTTGAAACTGTCAAAGGCAAGTGTAATGCAGGAGAGGATTTTGCAGTACAGTGATGAAAACCCCAATAGAACAGTTGTGAATCCATACATTCATTTCGGGCAGCGGTCAGTTTGGCCTAGAGGATTGCCTTTGGAGAATGTAGGTGAAATTGGGCATGAAGAGTTTTATGGTGAAGTGTTTGGAGGAATGCAGTACATTCAGCAGGGGATATCCAATGGCTTACCGGATGTGGATTCGGTTTTTTACCTCACTAGGAGGTCAGGGTCGGAAGCATTGGATATAAAGTTTGATGAGCATTCTCCAAAAGTTGCCTTACCACAAGGTATGATGGTGCCATTGAATTCTTTTAATACATTGTTTCATTCGAATGGATTTTGGGCTTTGATGCTTCCTGTTTCGGTTAGTACAATGGCTTCTGATGTATTGAGGGGTTATTGGGCACAAAGACTGTTGTGGGAAATTGGTGGTCATGTTGTTGTTTATCCTCCTACTGTACATAGATATGATAATGTTGAAGCATATCCATTTACAGAAGAGAAGGATTTTCATGTAAATGTGGGTCGATTGATTAAGTTTTTAGTTTGTTGGAGATCTGGTAAGGTCAAGTTGTTTGACAGAATCTTGGAATTAAGTTTTTTGATGGCGAAAGAAGGGTTTTGGACTGAGAAGGATGTGAAGTTTACTGCAGCTTGGCTTGAAGATCTGCTTGCTGTTGGTTACGTTCAGCCAAGGCTGAAGGCCATTAAACTGGATCAGCTGAGACCAACCACCATTGGTCATGCAGATAGGAAGGAATTTGTTCCTCAGAAACTACCTTCTGTGCATCTTGCAGTTAAGGAATCAGAAACAGTGAATTATGAGATTGGGAATCTAATTCGCTGGAGAAAGTTTTTTGGCAATGTTGTTGTGATCATGTTTGTCAGTGGGCCTGTGGAGCGAACTGCATTAAAGTGGAAATTACTTTATGGCAGGGTGTTTAAAACTGTGGTGATATTGTCCGACAGTACTAAAGCAGATTTAGCTGTGGAGCAAGCCACACTGGACCAAGTATACAAGTACCTCCCCAAAATATTTGATAGGTTTGCCGGTGCAGAAGGATTCTTGTTCCTCCGGGACAATACCATTCTCAACTACTGGAACTTACTACAAGCAGATAAAACTAAGCTGTGGATCACTGACAAGGTGCCTCAGTCTTGGACTACATTCTCAATTGAAGGAGAAGGCTCAGAATGGTTTTCTAAACAAGCAGACATGGTAAAGAAAGTCGTGAGCACCATGCCAGTTCATTTACAGGTCAACTACAAGGAGAGTAGCACAAGTAAGCAGAGTCTCATGATCTGCAACTCAGAGGTGTTCTATATCCCTCGACAATTTGTCGGGGACTTTGTGGATCTTGTAGGTCTCGTTGGCAAGTTTGGCATCCATAATAAGGTGGCCGTGCCCATGTTTTTCAGGGCAATGGATTTGCCTAATAACTATGACTCTGTGCTCAATACAATGATTCATAAACCAGAGGCATCACTGAGCAACTCTTCAAACATTTATTCTGCTCAAGTCCCAGCCGTCTACCCATGGACTGTTTCCAGTGAGTCAGATTTCGTCGAACTCATAAGATCCATGGCAATCGGTGATCCACTTCTTATGGAGCTATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
STELLO

Protein Analysis

766

Amino Acids

87.3

Weight (kDa)

7.71

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
STELLO PF03385 353 - 460 1.3e-07 STELLO glycosyltransferases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 549
AccB1I GGYRCC 3 cut(s) 549, 973, 1825
AccBSI CCGCTC 1 cut(s) 18
AccI GTMKAC 2 cut(s) 1692, 2208
AciI CCGC 3 cut(s) 16, 162, 745
AclWI GGATC 8 cut(s) 232, 363, 398, 1401, 1820, 2040, 2250, 2267
AcoI YGGCCR 1 cut(s) 2076
AcsI RAATTY 3 cut(s) 421, 982, 1436
AcuI CTGAAG 1 cut(s) 1397
AfaI GTAC 7 cut(s) 551, 689, 836, 1048, 1137, 1648, 1700
AfiI CCNNNNNNNGG 1 cut(s) 2071
AhdI GACNNNNNGTC 1 cut(s) 2015
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 8 cut(s) 458, 485, 490, 1331, 1399, 1664, 1807, 2290
AluI AGCT 8 cut(s) 458, 485, 490, 1331, 1399, 1664, 1807, 2290
Alw21I GWGCWC 2 cut(s) 1916, 2133
Alw26I GTCTC 5 cut(s) 349, 531, 1396, 1976, 2048
AlwI GGATC 8 cut(s) 232, 363, 398, 1401, 1820, 2040, 2250, 2267
AoxI GGCC 4 cut(s) 755, 1380, 1568, 2076
ApeKI GCWGC 2 cut(s) 742, 1328
ApoI RAATTY 3 cut(s) 421, 982, 1436
Asp700I GAANNNNTTC 1 cut(s) 1440
Asp718I GGTACC 1 cut(s) 549
AspS9I GGNCC 4 cut(s) 7, 478, 1568, 1684
AsuC2I CCSGG 1 cut(s) 1754
AsuHPI GGTGA 8 cut(s) 145, 313, 617, 632, 797, 824, 1642, 2282
AsuII TTCGAA 3 cut(s) 376, 425, 1007
AvaII GGWCC 3 cut(s) 7, 478, 1684
BaeGI GKGCMC 2 cut(s) 1084, 2085
BanI GGYRCC 3 cut(s) 549, 973, 1825
BarI GAAGNNNNNNTAC 2 cut(s) 1039, 1071
BbsI GAAGAC 2 cut(s) 85, 434
Bbv12I GWGCWC 2 cut(s) 1916, 2133
BbvI GCAGC 2 cut(s) 754, 1340
BccI CCATC 5 cut(s) 287, 327, 370, 964, 1276
BceAI ACGGC 2 cut(s) 2063, 2189
BclI TGATCA 1 cut(s) 1551
BcnI CCSGG 1 cut(s) 1754
BcoDI GTCTC 5 cut(s) 349, 531, 1396, 1976, 2048
BfaI CTAG 3 cut(s) 146, 759, 894
BfmI CTRYAG 1 cut(s) 1326
BglII AGATCT 2 cut(s) 1232, 1342
BisI GCNGC 3 cut(s) 162, 743, 1329
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 3 cut(s) 163, 744, 1330
BmcAI AGTACT 1 cut(s) 1648
Bme1390I CCNGG 1 cut(s) 1754
Bme18I GGWCC 3 cut(s) 7, 478, 1684
BmeRI GACNNNNNGTC 1 cut(s) 2015
BmgT120I GGNCC 4 cut(s) 7, 478, 1568, 1684
BmiI GGNNCC 4 cut(s) 446, 551, 975, 1827
BmrFI CCNGG 1 cut(s) 1754
BmsI GCATC 5 cut(s) 580, 1017, 1474, 2070, 2168
BpiI GAAGAC 2 cut(s) 85, 434
BpmI CTGGAG 2 cut(s) 512, 1543
Bpu1102I GCTNAGC 1 cut(s) 486
Bpu14I TTCGAA 3 cut(s) 376, 425, 1007
BpuEI CTTGAG 2 cut(s) 434, 2178
BpuMI CCSGG 1 cut(s) 1754
BsaI GGTCTC 3 cut(s) 349, 1396, 2048
BsaJI CCNNGG 3 cut(s) 1370, 2213, 2259
BsaWI WCCGGW 1 cut(s) 865
BsaXI ACNNNNNCTCC 6 cut(s) 176, 206, 260, 290, 1222, 1252
Bsc4I CCNNNNNNNGG 1 cut(s) 2071
Bse118I RCCGGY 1 cut(s) 1727
Bse1I ACTGG 6 cut(s) 387, 1395, 1686, 1781, 1922, 2226
Bse3DI GCAATG 3 cut(s) 156, 1546, 2106
BseDI CCNNGG 3 cut(s) 1370, 2213, 2259
BseGI GGATG 4 cut(s) 279, 874, 1318, 2061
BseLI CCNNNNNNNGG 1 cut(s) 2071
BseMI GCAATG 3 cut(s) 156, 1546, 2106
BseMII CTCAG 8 cut(s) 339, 1296, 1391, 1460, 1844, 1881, 2001, 2156
BseNI ACTGG 6 cut(s) 387, 1395, 1686, 1781, 1922, 2226
BseSI GKGCMC 2 cut(s) 1084, 2085
BseXI GCAGC 2 cut(s) 754, 1340
BseYI CCCAGC 1 cut(s) 2200
BsgI GTGCAG 1 cut(s) 1752
BshFI GGCC 4 cut(s) 757, 1382, 1570, 2078
BshNI GGYRCC 3 cut(s) 549, 973, 1825
BsiHKAI GWGCWC 2 cut(s) 1916, 2133
BsiSI CCGG 3 cut(s) 866, 1728, 1753
BslFI GGGAC 3 cut(s) 1769, 2036, 2183
BslI CCNNNNNNNGG 1 cut(s) 2071
BsmAI GTCTC 5 cut(s) 349, 531, 1396, 1976, 2048
BsmFI GGGAC 3 cut(s) 1769, 2036, 2183
BsmI GAATGC 2 cut(s) 834, 937
BsnI GGCC 4 cut(s) 757, 1382, 1570, 2078
Bso31I GGTCTC 3 cut(s) 349, 1396, 2048
Bsp119I TTCGAA 3 cut(s) 376, 425, 1007
Bsp1286I GDGCHC 4 cut(s) 1084, 1916, 2085, 2133
Bsp1407I TGTACA 1 cut(s) 1135
Bsp1720I GCTNAGC 1 cut(s) 486
Bsp19I CCATGG 2 cut(s) 2213, 2259
BspACI CCGC 3 cut(s) 16, 162, 745
BspANI GGCC 4 cut(s) 757, 1382, 1570, 2078
BspCNI CTCAG 8 cut(s) 338, 1297, 1392, 1459, 1843, 1880, 2000, 2157
BspHI TCATGA 1 cut(s) 1974
BspLI GGNNCC 4 cut(s) 446, 551, 975, 1827
BspMAI CTGCAG 1 cut(s) 1330
BspPI GGATC 8 cut(s) 232, 363, 398, 1401, 1820, 2040, 2250, 2267
BspT104I TTCGAA 3 cut(s) 376, 425, 1007
BspT107I GGYRCC 3 cut(s) 549, 973, 1825
BspTNI GGTCTC 3 cut(s) 349, 1396, 2048
BsrBI CCGCTC 1 cut(s) 18
BsrDI GCAATG 3 cut(s) 156, 1546, 2106
BsrFI RCCGGY 1 cut(s) 1727
BsrGI TGTACA 1 cut(s) 1135
BsrI ACTGG 6 cut(s) 387, 1395, 1686, 1781, 1922, 2226
BssAI RCCGGY 1 cut(s) 1727
BssECI CCNNGG 3 cut(s) 1370, 2213, 2259
BssNAI GTATAC 1 cut(s) 1693
BssT1I CCWWGG 3 cut(s) 1370, 2213, 2259
Bst1107I GTATAC 1 cut(s) 1693
Bst6I CTCTTC 6 cut(s) 125, 173, 533, 795, 1170, 2179
BstAUI TGTACA 1 cut(s) 1135
BstBI TTCGAA 3 cut(s) 376, 425, 1007
BstC8I GCNNGC 3 cut(s) 401, 1350, 1674
BstDSI CCRYGG 2 cut(s) 2213, 2259
BstF5I GGATG 4 cut(s) 279, 874, 1318, 2061
BstMAI GTCTC 5 cut(s) 349, 531, 1396, 1976, 2048
BstMWI GCNNNNNNNGC 3 cut(s) 1576, 1661, 2058
BstSCI CCNGG 1 cut(s) 1752
BstSFI CTRYAG 1 cut(s) 1326
BstSLI GKGCMC 2 cut(s) 1084, 2085
BstV1I GCAGC 2 cut(s) 754, 1340
BstV2I GAAGAC 2 cut(s) 85, 434
BstX2I RGATCY 6 cut(s) 237, 355, 1232, 1342, 2032, 2255
BstXI CCANNNNNNTGG 2 cut(s) 441, 1390
BstYI RGATCY 6 cut(s) 237, 355, 1232, 1342, 2032, 2255
BstZ17I GTATAC 1 cut(s) 1693
BsuRI GGCC 4 cut(s) 757, 1382, 1570, 2078
BtgI CCRYGG 2 cut(s) 2213, 2259
BtsCI GGATG 4 cut(s) 279, 874, 1318, 2061
BtsIMutI CAGTG 7 cut(s) 697, 1497, 1570, 1679, 1815, 2162, 2233
Cac8I GCNNGC 3 cut(s) 401, 1350, 1674
CciI TCATGA 1 cut(s) 1974
Cfr10I RCCGGY 1 cut(s) 1727
Cfr13I GGNCC 4 cut(s) 7, 478, 1568, 1684
Csp6I GTAC 7 cut(s) 550, 688, 835, 1047, 1136, 1647, 1699
CspCI CAANNNNNGTGG 2 cut(s) 232, 267
CviQI GTAC 7 cut(s) 550, 688, 835, 1047, 1136, 1647, 1699
DraI TTTAAA 1 cut(s) 1621
DriI GACNNNNNGTC 1 cut(s) 2015
EaeI YGGCCR 1 cut(s) 2076
Eam1104I CTCTTC 6 cut(s) 125, 173, 533, 795, 1170, 2179
Eam1105I GACNNNNNGTC 1 cut(s) 2015
EarI CTCTTC 6 cut(s) 125, 173, 533, 795, 1170, 2179
Eco130I CCWWGG 3 cut(s) 1370, 2213, 2259
Eco31I GGTCTC 3 cut(s) 349, 1396, 2048
Eco32I GATATC 1 cut(s) 852
Eco47I GGWCC 3 cut(s) 7, 478, 1684
Eco57I CTGAAG 1 cut(s) 1397
EcoRI GAATTC 2 cut(s) 421, 982
EcoRV GATATC 1 cut(s) 852
EcoT14I CCWWGG 3 cut(s) 1370, 2213, 2259
ErhI CCWWGG 3 cut(s) 1370, 2213, 2259
FalI AAGNNNNNCTT 2 cut(s) 1332, 1364
FaqI GGGAC 3 cut(s) 1769, 2036, 2183
FbaI TGATCA 1 cut(s) 1551
FblI GTMKAC 2 cut(s) 1692, 2208
Fnu4HI GCNGC 3 cut(s) 162, 743, 1329
FokI GGATG 4 cut(s) 266, 881, 1325, 2048
Fsp4HI GCNGC 3 cut(s) 162, 743, 1329
FspBI CTAG 3 cut(s) 146, 759, 894
GluI GCNGC 3 cut(s) 162, 743, 1329
GsaI CCCAGC 1 cut(s) 2204
GsuI CTGGAG 2 cut(s) 512, 1543
HaeIII GGCC 4 cut(s) 757, 1382, 1570, 2078
HapII CCGG 3 cut(s) 866, 1728, 1753
HincII GTYRAC 2 cut(s) 616, 1939
HindII GTYRAC 2 cut(s) 616, 1939
HpaII CCGG 3 cut(s) 866, 1728, 1753
HphI GGTGA 8 cut(s) 145, 313, 617, 632, 797, 824, 1642, 2282
Hpy166II GTNNAC 5 cut(s) 616, 1323, 1693, 1939, 2209
Hpy188III TCNNGA 4 cut(s) 124, 388, 1909, 1975
Hpy8I GTNNAC 5 cut(s) 616, 1323, 1693, 1939, 2209
Hpy99I CGWCG 1 cut(s) 2246
HpyCH4IV ACGT 1 cut(s) 1362
HpyF10VI GCNNNNNNNGC 3 cut(s) 1576, 1661, 2058
HpySE526I ACGT 1 cut(s) 1362
KpnI GGTACC 1 cut(s) 553
Ksp22I TGATCA 1 cut(s) 1551
LmnI GCTCC 5 cut(s) 444, 455, 1576, 1669, 2287
Lsp1109I GCAGC 2 cut(s) 754, 1340
LweI GCATC 5 cut(s) 580, 1017, 1474, 2070, 2168
MaeI CTAG 3 cut(s) 146, 759, 894
MaeII ACGT 1 cut(s) 1362
MaeIII GTNAC 1 cut(s) 1358
MbiI CCGCTC 1 cut(s) 18
MfeI CAATTG 1 cut(s) 1851
MflI RGATCY 6 cut(s) 237, 355, 1232, 1342, 2032, 2255
MhlI GDGCHC 4 cut(s) 1084, 1916, 2085, 2133
MlyI GAGTC 6 cut(s) 185, 424, 533, 1978, 2117, 2240
MmeI TCCRAC 4 cut(s) 330, 888, 1208, 1665
MroXI GAANNNNTTC 1 cut(s) 1440
MseI TTAA 8 cut(s) 990, 1212, 1271, 1386, 1476, 1589, 1620, 2296
MslI CAYNNNNRTG 4 cut(s) 1008, 1143, 1194, 1591
MspA1I CMGCKG 2 cut(s) 745, 1399
MspI CCGG 3 cut(s) 866, 1728, 1753
MspR9I CCNGG 1 cut(s) 1754
MunI CAATTG 1 cut(s) 1851
Mva1269I GAATGC 2 cut(s) 834, 937
MwoI GCNNNNNNNGC 3 cut(s) 1576, 1661, 2058
NciI CCSGG 1 cut(s) 1754
NcoI CCATGG 2 cut(s) 2213, 2259
NlaIV GGNNCC 4 cut(s) 446, 551, 975, 1827
NspV TTCGAA 3 cut(s) 376, 425, 1007
PagI TCATGA 1 cut(s) 1974
PctI GAATGC 2 cut(s) 834, 937
PdmI GAANNNNTTC 1 cut(s) 1440
PfeI GAWTC 9 cut(s) 264, 368, 721, 875, 1260, 1481, 1510, 1740, 2143
PfoI TCCNGGA 1 cut(s) 1752
PkrI GCNGC 3 cut(s) 163, 744, 1330
PleI GAGTC 6 cut(s) 185, 424, 532, 1977, 2117, 2239
PpsI GAGTC 6 cut(s) 185, 424, 532, 1977, 2117, 2239
PspFI CCCAGC 1 cut(s) 2200
PspN4I GGNNCC 4 cut(s) 446, 551, 975, 1827
PspPI GGNCC 4 cut(s) 7, 478, 1568, 1684
PstI CTGCAG 1 cut(s) 1330
PsuI RGATCY 6 cut(s) 237, 355, 1232, 1342, 2032, 2255
PvuII CAGCTG 1 cut(s) 1399
RsaI GTAC 7 cut(s) 551, 689, 836, 1048, 1137, 1648, 1700
RsaNI GTAC 7 cut(s) 550, 688, 835, 1047, 1136, 1647, 1699
RseI CAYNNNNRTG 4 cut(s) 1008, 1143, 1194, 1591
SaqAI TTAA 8 cut(s) 990, 1212, 1271, 1386, 1476, 1589, 1620, 2296
SatI GCNGC 3 cut(s) 162, 743, 1329
Sau96I GGNCC 4 cut(s) 7, 478, 1568, 1684
ScaI AGTACT 1 cut(s) 1648
SchI GAGTC 6 cut(s) 185, 424, 533, 1978, 2117, 2240
ScrFI CCNGG 1 cut(s) 1754
SduI GDGCHC 4 cut(s) 1084, 1916, 2085, 2133
SfaNI GCATC 5 cut(s) 580, 1017, 1474, 2070, 2168
SfcI CTRYAG 1 cut(s) 1326
SfuI TTCGAA 3 cut(s) 376, 425, 1007
SinI GGWCC 3 cut(s) 7, 478, 1684
SmiMI CAYNNNNRTG 4 cut(s) 1008, 1143, 1194, 1591
SmlI CTYRAG 2 cut(s) 449, 2193
SmoI CTYRAG 2 cut(s) 449, 2193
SsiI CCGC 3 cut(s) 16, 162, 745
SspI AATATT 1 cut(s) 1713
SspMI CTAG 3 cut(s) 146, 759, 894
StyD4I CCNGG 1 cut(s) 1752
StyI CCWWGG 3 cut(s) 1370, 2213, 2259
TaiI ACGT 1 cut(s) 1365
TaqI TCGA 7 cut(s) 376, 425, 588, 1007, 1204, 2008, 2244
TatI WGTACW 5 cut(s) 687, 834, 1046, 1135, 1646
TauI GCSGC 1 cut(s) 164
TfiI GAWTC 9 cut(s) 264, 368, 721, 875, 1260, 1481, 1510, 1740, 2143
Tru1I TTAA 8 cut(s) 990, 1212, 1271, 1386, 1476, 1589, 1620, 2296
Tru9I TTAA 8 cut(s) 990, 1212, 1271, 1386, 1476, 1589, 1620, 2296
TscAI CASTG 7 cut(s) 697, 1497, 1570, 1686, 1822, 2169, 2233
TseI GCWGC 2 cut(s) 742, 1328
TspDTI ATGAA 8 cut(s) 129, 711, 722, 813, 992, 1178, 1916, 2135
TspRI CASTG 7 cut(s) 697, 1497, 1570, 1686, 1822, 2169, 2233
VpaK11BI GGWCC 3 cut(s) 7, 478, 1684
XapI RAATTY 3 cut(s) 421, 982, 1436
XmiI GTMKAC 2 cut(s) 1692, 2208
XmnI GAANNNNTTC 1 cut(s) 1440
XspI CTAG 3 cut(s) 146, 759, 894
ZrmI AGTACT 1 cut(s) 1648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.