Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002600

Physical Location & Seq

Genomic Coordinates Forward (+)

27084423 .. 27088741

Gene Structure 4319 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G022180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGTTGGTCCAAGAGCGAAGCAGACCCAAGTCCCCTAAATTCTCCAACACTAGAGCCAACCTCGATTTCTCCCCCAACCTCGATTTCTCCACATGGTTTTCCGACAACCTGTACAAGATCGTCACCGTGGTGGCCCTCATCGCCACCGTGGCGGCGCTCTTCGTGCTCCGGAACATCGGCGACACGGCGGCGCTGCTCTGCTTCCAGACCCAGGCCGCCGAAGCCGTGGAGAGGGTCCAAATGCCGCAGCTGGAGGAGAAGAGCGTCAAGCGAGTCTTCGACAAGGCGTCGCCGTACGCGGCGTTCCGATCTGAGAGGTGGGTGGTGGTGTCGGTGTCGGAGTACCCGACGGAGCCGCTGCGGAAGCTGGTGAAGATCCGAGGGTGGCAGGTGCTGGCGGTTGGGAACTCCAAAACGCCGTCGGATTGGAGCCTCAAAGGTGCGATCTTCTTGTCCCTTGAGCAACAAGCTGGGTTGGGTTTTAGGGTTTTGGAGTATTTGCCTTATGATTCTTATGTTAGGAAGACTGTGGGGTACTTGTTTGCGATCCAGCACGGTGCCCGGAAAATCTTCGACGCCGACGACCGTGGGGAGGTTATTGATAACGATTTGGGGAAACATTTTGATATAGATTTGGTAGGTGAGGAGGGGCATAGGCAAGAGACTATATTGCAGTATAGCCATGAGAATCCGAATAGGACTATTGTCAATCCCTATATACATTTCGGCCAGCGCTCCGTTTGGCCTAGAGGTTTGCCGTTGGAGAATGTGGGTGAGCTTGGTCATGAGGAGTTCTACACTGAGGTTCTCGCTGGGAAACAGTTCATACAGCAGGGGATATCCAATGGGCTACCGGATGTGGATTCGGTGTTTTATTTTACGCGAAAATCGGGGTTGGAAGCGTTTGATATTAGGTTTGATGAGCATGCACCGAAAGTGGCATTGCCGCAGGGGATGATGGTGCCGGTGAATTCTTTCAATACGATTTTCCATTCGCATGCGTTTTGGGGATTGATGCTTCCTGTTTCGGTTAGCACAATGGCGTCTGATGTGTTGAGGGGGTATTGGGCGCAGAGGATTTTGTGGGAAGTAGGTGGTCAGGTTGTGGTGTATCCACCAACTGTGCACCGGTATGATAGAATTGAGGCGTATCCGTTTTCGGAAGAGAAGGATCTTCATGTGAATGTAGGACGTTTGATTAAATTTTTGATTTCGTGGAGAGCAAGCAAGCAAAGATTGATTGAAAAGATCCTGGAGTTGAGCTTTGCTATGGCAGAAGAGGGGTTTTGGACTGAGAAGGATGTGAAGTTTACTGCTGCTTGGCTTCAGGACTTGATTGCTGTTGGGTACAACCAACCGAGATTAATGTCATTGGATTTGGGTAGGCCACTGGGAAATATTGGTCATGGGGATAGAAGAGAATTTGTTCCTCAGAAGTTCCCATCTGTTCATCTTGGAGTTGAGGAAACGGGAACTGTGAACTATGAAATTGGAAATTTGATCCGATGGAGAAAGAACTTTGGGAATGTTGTCCTTATTATGTTCTGCAGTGGTCCTGTGGAACGTACTGCTCTTGAATGGAGATTGCTTTATGGGAGGATATTCAAAACTGTGATCATGTTGTCAGAATCGAAGAATCTAGACCTTGCTGTTGAAGAAGGAAAACTGGAGAATGTTTACAAGTACCTACCCAAAATATTTGATCGATATTCTGGTGCAGATGGGTTTTTATTCCTTCACGACGACACTATTCTTAATTACTGGAATCTTCTACAAGCAGACAAAAACAAATTATGGATCACAAATGAGGTATCCAAGTCTTGGACCAAGGTGTCGCCAAATGACAACTCAGATTGGTTTTCAAAGCAAGCAAGCATGGTAAAGAAGGTTGTTAGCATGATGCCAGCTCACTTCCAAGTCAGTTATAAGAACACCATACCTAGTCGCAAGAGCTTTATAGTATGCAGTTCTGAGATATTCTACATCCCTCGGCGCTTCATATCTGACTTTGTTGATCTTGTTAATCAAGTGGGAGATCTGGAAATCCATCACAAAGTTGCCATTCCGATGTTCTTTCTAGCACTAGATTCACCTCAGAATTTTGACTCGGTGCTAAGCACAATGGTCTACGAGGAAGAATCAGCTTCTACTAATTCTTCATCCCTTTATTCGGCCCAAGTGCCTGCCGTTCACCCATGGAGTGTGTCAAGCGAACAAGATTTCATAAAACTAATAAGAATAATGGCAGAAGGTGACCCTCTCTTAATGGAGTTAGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006073 GO:0006109 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009664 GO:0009832 GO:0009889 GO:0009987 GO:0010383 GO:0010556 GO:0010675 GO:0010962 GO:0010981 GO:0012505 GO:0016043 GO:0016051 GO:0019222 GO:0030243 GO:0030244 GO:0030312 GO:0031323 GO:0031326 GO:0031410 GO:0031982 GO:0031984 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044036 GO:0044038 GO:0044042 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0050789 GO:0050794 GO:0051128 GO:0051273 GO:0051274 GO:0052324 GO:0052541 GO:0060255 GO:0065007 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0097708 GO:0098791 GO:1901576 GO:1903338 GO:2000112 GO:2001006 GO:2001009

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STELLO

Protein Analysis

759

Amino Acids

86.7

Weight (kDa)

6.11

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STELLO	PF03385	349 - 457	6.7e-10	STELLO glycosyltransferases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41770 AT3G57420
fragaria_vesca	FvH4_6g23790 FvH4_6g23790 FvH4_7g01460
malus_domestica	MD07G1018300.v1.1 MD12G1073600.v1.1 MD14G1071900.v1.1
prunus_persica	Prupe.2G020200_v2.0.a1 Prupe.7G061300_v2.0.a1
pyrus_communis	pycom07g01440 pycom12g06360 pycom14g06170
rosa_chinensis	RchiOBHm_Chr1g0317301 RchiOBHm_Chr3g0482321
rosa_laevigata	RLG00000023359 RLG00000029570 RLG00000030608
rosa_multiflora	Rmu_co8232473.1_g000001 Rmu_co8457415.1_g000001 Rmu_sc0000135.1_g000005 Rmu_sc0013869.1_g000004 Rmu_sc0015957.1_g000002
rosa_roxburghii	Rroxscaffold_4G00330510 Rroxscaffold_6G00399430 Rroxscaffold_6G00399450 Rroxscaffold_6G00399930
rosa_rugosa	Rorug01G0015700 Rorug03G0195800 Rorug03G0195800
rosa_samantha	Rh1AG027100 Rh1BG023000 Rh1CG025100 Rh1DG046100 Rh3AG247400 Rh3BG281900 Rh3CG278900 Rh3DG274700
rosa_wichuraiana	Rw1G001870 Rw3G022180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1926
AarI	CACCTGC	1 cut(s)	379
AasI	GACNNNNNNGTC	1 cut(s)	1831
Acc36I	ACCTGC	1 cut(s)	379
AccB1I	GGYRCC	2 cut(s)	557, 961
AccB7I	CCANNNNNTGG	1 cut(s)	1821
AccI	GTMKAC	1 cut(s)	2127
AccII	CGCG	2 cut(s)	299, 883
AccIII	TCCGGA	1 cut(s)	168
AciI	CCGC	9 cut(s)	152, 188, 216, 245, 299, 356, 361, 398, 947
AclWI	GGATC	6 cut(s)	370, 541, 1179, 1243, 1495, 1805
AcoI	YGGCCR	1 cut(s)	727
AcsI	RAATTY	6 cut(s)	38, 970, 1202, 1421, 1495, 2098
AcuI	CTGAAG	1 cut(s)	1310
AcyI	GRCGYC	3 cut(s)	287, 576, 1043
AfaI	GTAC	7 cut(s)	113, 296, 344, 536, 1349, 1567, 1685
AfeI	AGCGCT	1 cut(s)	734
AfiI	CCNNNNNNNGG	5 cut(s)	211, 231, 592, 1821, 2170
AgeI	ACCGGT	1 cut(s)	1128
AgsI	TTSAA	6 cut(s)	979, 1244, 1577, 1606, 1655, 1863
AhdI	GACNNNNNGTC	1 cut(s)	286
AjnI	CCWGG	2 cut(s)	210, 1251
AjuI	GAANNNNNNNTTGG	4 cut(s)	50, 68, 82, 100
AleI	CACNNNNGTG	1 cut(s)	128
AluBI	AGCT	8 cut(s)	250, 367, 470, 778, 1263, 1907, 1953, 2144
AluI	AGCT	8 cut(s)	250, 367, 470, 778, 1263, 1907, 1953, 2144
Alw21I	GWGCWC	2 cut(s)	168, 1128
Alw26I	GTCTC	1 cut(s)	656
Alw44I	GTGCAC	1 cut(s)	1124
AlwI	GGATC	6 cut(s)	370, 541, 1179, 1243, 1495, 1805
AlwNI	CAGNNNCTG	1 cut(s)	394
Aor13HI	TCCGGA	1 cut(s)	168
Aor51HI	AGCGCT	1 cut(s)	734
AoxI	GGCC	6 cut(s)	132, 213, 727, 743, 1385, 2172
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	4 cut(s)	193, 247, 358, 1316
ApoI	RAATTY	6 cut(s)	38, 970, 1202, 1421, 1495, 2098
AseI	ATTAAT	1 cut(s)	1364
AsiGI	ACCGGT	1 cut(s)	1128
Asp700I	GAANNNNTTC	4 cut(s)	569, 821, 974, 1425
AspLEI	GCGC	5 cut(s)	157, 193, 735, 1072, 1995
AspS9I	GGNCC	6 cut(s)	7, 133, 235, 1553, 1824, 2173
AsuC2I	CCSGG	1 cut(s)	562
AsuHPI	GGTGA	8 cut(s)	115, 382, 653, 785, 979, 2082, 2183, 2264
AvaII	GGWCC	4 cut(s)	7, 235, 1553, 1824
BaeGI	GKGCMC	2 cut(s)	562, 1128
BanI	GGYRCC	2 cut(s)	557, 961
BbsI	GAAGAC	2 cut(s)	268, 530
Bbv12I	GWGCWC	2 cut(s)	168, 1128
BbvI	GCAGC	4 cut(s)	180, 259, 345, 1303
BccI	CCATC	5 cut(s)	952, 1450, 1500, 1715, 2055
BceAI	ACGGC	6 cut(s)	201, 209, 277, 403, 742, 2171
BciT130I	CCWGG	2 cut(s)	212, 1253
BciVI	GTATCC	3 cut(s)	1122, 1161, 1822
BclI	TGATCA	1 cut(s)	1614
BcnI	CCSGG	1 cut(s)	562
BcoDI	GTCTC	1 cut(s)	656
BfaI	CTAG	6 cut(s)	51, 747, 1640, 1941, 2078, 2084
BfmI	CTRYAG	1 cut(s)	1546
BfoI	RGCGCY	4 cut(s)	158, 194, 736, 1996
BfuAI	ACCTGC	1 cut(s)	379
BfuI	GTATCC	3 cut(s)	1122, 1161, 1822
BglI	GCCNNNNNGGC	1 cut(s)	149
BglII	AGATCT	1 cut(s)	2035
BlpI	GCTNAGC	1 cut(s)	2114
Bme1390I	CCNGG	3 cut(s)	212, 562, 1253
Bme18I	GGWCC	4 cut(s)	7, 235, 1553, 1824
BmeRI	GACNNNNNGTC	1 cut(s)	286
BmgT120I	GGNCC	6 cut(s)	7, 133, 235, 1553, 1824, 2173
BmiI	GGNNCC	5 cut(s)	236, 354, 431, 559, 963
BmrFI	CCNGG	3 cut(s)	212, 562, 1253
BmrI	ACTGGG	1 cut(s)	1400
BmsI	GCATC	2 cut(s)	1005, 1890
BmuI	ACTGGG	1 cut(s)	1400
BoxI	GACNNNNGTC	2 cut(s)	28, 704
BpiI	GAAGAC	2 cut(s)	268, 530
BplI	GAGNNNNNCTC	2 cut(s)	45, 77
BpmI	CTGGAG	3 cut(s)	272, 1274, 1688
Bpu1102I	GCTNAGC	1 cut(s)	2114
BpuEI	CTTGAG	1 cut(s)	479
BpuMI	CCSGG	1 cut(s)	562
Bsa29I	ATCGAT	1 cut(s)	1705
BsaHI	GRCGYC	3 cut(s)	287, 576, 1043
BsaJI	CCNNGG	9 cut(s)	126, 147, 210, 225, 379, 586, 1827, 1988, 2195
BsaWI	WCCGGW	3 cut(s)	168, 853, 1128
Bsc4I	CCNNNNNNNGG	5 cut(s)	211, 231, 592, 1821, 2170
Bse118I	RCCGGY	2 cut(s)	964, 1128
Bse1I	ACTGG	3 cut(s)	1395, 1671, 1766
Bse3DI	GCAATG	1 cut(s)	941
BseAI	TCCGGA	1 cut(s)	168
BseBI	CCWGG	2 cut(s)	212, 1253
BseCI	ATCGAT	1 cut(s)	1705
BseDI	CCNNGG	9 cut(s)	126, 147, 210, 225, 379, 586, 1827, 1988, 2195
BseGI	GGATG	5 cut(s)	862, 960, 1306, 1983, 2159
BseLI	CCNNNNNNNGG	5 cut(s)	211, 231, 592, 1821, 2170
BseMI	GCAATG	1 cut(s)	941
BseMII	CTCAG	7 cut(s)	303, 792, 1284, 1445, 1863, 1962, 2108
BseNI	ACTGG	3 cut(s)	1395, 1671, 1766
BseRI	GAGGAG	3 cut(s)	269, 659, 803
BseSI	GKGCMC	2 cut(s)	562, 1128
BseXI	GCAGC	4 cut(s)	180, 259, 345, 1303
BseYI	CCCAGC	2 cut(s)	470, 812
BsgI	GTGCAG	1 cut(s)	1737
Bsh1236I	CGCG	2 cut(s)	299, 883
Bsh1285I	CGRYCG	1 cut(s)	586
BshFI	GGCC	6 cut(s)	134, 215, 729, 745, 1387, 2174
BshNI	GGYRCC	2 cut(s)	557, 961
BshTI	ACCGGT	1 cut(s)	1128
BshVI	ATCGAT	1 cut(s)	1705
BsiEI	CGRYCG	1 cut(s)	586
BsiHKAI	GWGCWC	2 cut(s)	168, 1128
BsiSI	CCGG	5 cut(s)	169, 562, 854, 965, 1129
BsiWI	CGTACG	1 cut(s)	294
BslFI	GGGAC	2 cut(s)	16, 439
BslI	CCNNNNNNNGG	5 cut(s)	211, 231, 592, 1821, 2170
BsmAI	GTCTC	1 cut(s)	656
BsmFI	GGGAC	2 cut(s)	16, 439
BsnI	GGCC	6 cut(s)	134, 215, 729, 745, 1387, 2174
Bsp1286I	GDGCHC	3 cut(s)	168, 562, 1128
Bsp13I	TCCGGA	1 cut(s)	168
Bsp1407I	TGTACA	1 cut(s)	111
Bsp1720I	GCTNAGC	1 cut(s)	2114
Bsp19I	CCATGG	1 cut(s)	2195
BspACI	CCGC	9 cut(s)	152, 188, 216, 245, 299, 356, 361, 398, 947
BspANI	GGCC	6 cut(s)	134, 215, 729, 745, 1387, 2174
BspCNI	CTCAG	7 cut(s)	304, 793, 1285, 1444, 1862, 1963, 2107
BspDI	ATCGAT	1 cut(s)	1705
BspEI	TCCGGA	1 cut(s)	168
BspFNI	CGCG	2 cut(s)	299, 883
BspHI	TCATGA	1 cut(s)	784
BspLI	GGNNCC	5 cut(s)	236, 354, 431, 559, 963
BspMAI	CTGCAG	1 cut(s)	1550
BspMI	ACCTGC	1 cut(s)	379
BspPI	GGATC	6 cut(s)	370, 541, 1179, 1243, 1495, 1805
BspQI	GCTCTTC	2 cut(s)	164, 254
BspT107I	GGYRCC	2 cut(s)	557, 961
BsrDI	GCAATG	1 cut(s)	941
BsrFI	RCCGGY	2 cut(s)	964, 1128
BsrGI	TGTACA	1 cut(s)	111
BsrI	ACTGG	3 cut(s)	1395, 1671, 1766
BssAI	RCCGGY	2 cut(s)	964, 1128
BssECI	CCNNGG	9 cut(s)	126, 147, 210, 225, 379, 586, 1827, 1988, 2195
BssNI	GRCGYC	3 cut(s)	287, 576, 1043
BssT1I	CCWWGG	2 cut(s)	1827, 2195
Bst2UI	CCWGG	2 cut(s)	212, 1253
Bst4CI	ACNGT	9 cut(s)	127, 148, 529, 557, 587, 822, 1123, 1477, 1612
Bst6I	CTCTTC	5 cut(s)	164, 254, 1158, 1272, 1411
BstACI	GRCGYC	3 cut(s)	287, 576, 1043
BstAUI	TGTACA	1 cut(s)	111
BstDEI	CTNAG	8 cut(s)	312, 801, 1293, 1431, 1849, 1971, 2094, 2114
BstDSI	CCRYGG	5 cut(s)	126, 147, 225, 586, 2195
BstEII	GGTNACC	1 cut(s)	2252
BstF5I	GGATG	5 cut(s)	862, 960, 1306, 1983, 2159
BstFNI	CGCG	2 cut(s)	299, 883
BstH2I	RGCGCY	4 cut(s)	158, 194, 736, 1996
BstHHI	GCGC	5 cut(s)	157, 193, 735, 1072, 1995
BstMAI	GTCTC	1 cut(s)	656
BstMCI	CGRYCG	1 cut(s)	586
BstMWI	GCNNNNNNNGC	5 cut(s)	140, 149, 163, 221, 364
BstNI	CCWGG	2 cut(s)	212, 1253
BstNSI	RCATGY	2 cut(s)	929, 1001
BstPAI	GACNNNNGTC	2 cut(s)	28, 704
BstPI	GGTNACC	1 cut(s)	2252
BstSCI	CCNGG	3 cut(s)	210, 560, 1251
BstSFI	CTRYAG	1 cut(s)	1546
BstSLI	GKGCMC	2 cut(s)	562, 1128
BstUI	CGCG	2 cut(s)	299, 883
BstV1I	GCAGC	4 cut(s)	180, 259, 345, 1303
BstV2I	GAAGAC	2 cut(s)	268, 530
BstX2I	RGATCY	4 cut(s)	375, 1171, 1248, 2035
BstYI	RGATCY	4 cut(s)	375, 1171, 1248, 2035
Bsu15I	ATCGAT	1 cut(s)	1705
BsuI	GTATCC	3 cut(s)	1122, 1161, 1822
BsuRI	GGCC	6 cut(s)	134, 215, 729, 745, 1387, 2174
BsuTUI	ATCGAT	1 cut(s)	1705
BtgI	CCRYGG	5 cut(s)	126, 147, 225, 586, 2195
BtgZI	GCGATG	1 cut(s)	124
BtsCI	GGATG	5 cut(s)	862, 960, 1306, 1983, 2159
BtsI	GCAGTG	1 cut(s)	1555
BtsIMutI	CAGTG	3 cut(s)	798, 1388, 1555
BveI	ACCTGC	1 cut(s)	379
CaiI	CAGNNNCTG	1 cut(s)	394
CciI	TCATGA	1 cut(s)	784
CfoI	GCGC	5 cut(s)	157, 193, 735, 1072, 1995
Cfr10I	RCCGGY	2 cut(s)	964, 1128
Cfr13I	GGNCC	6 cut(s)	7, 133, 235, 1553, 1824, 2173
ClaI	ATCGAT	1 cut(s)	1705
CseI	GACGC	4 cut(s)	253, 276, 584, 1032
Csp6I	GTAC	7 cut(s)	112, 295, 343, 535, 1348, 1566, 1684
CspAI	ACCGGT	1 cut(s)	1128
CviQI	GTAC	7 cut(s)	112, 295, 343, 535, 1348, 1566, 1684
DdeI	CTNAG	8 cut(s)	312, 801, 1293, 1431, 1849, 1971, 2094, 2114
DrdI	GACNNNNNNGTC	1 cut(s)	1831
DriI	GACNNNNNGTC	1 cut(s)	286
DseDI	GACNNNNNNGTC	1 cut(s)	1831
EaeI	YGGCCR	1 cut(s)	727
Eam1104I	CTCTTC	5 cut(s)	164, 254, 1158, 1272, 1411
Eam1105I	GACNNNNNGTC	1 cut(s)	286
EarI	CTCTTC	5 cut(s)	164, 254, 1158, 1272, 1411
Eco130I	CCWWGG	2 cut(s)	1827, 2195
Eco32I	GATATC	1 cut(s)	840
Eco47I	GGWCC	4 cut(s)	7, 235, 1553, 1824
Eco47III	AGCGCT	1 cut(s)	734
Eco57I	CTGAAG	1 cut(s)	1310
Eco91I	GGTNACC	1 cut(s)	2252
EcoO65I	GGTNACC	1 cut(s)	2252
EcoRI	GAATTC	1 cut(s)	970
EcoRII	CCWGG	2 cut(s)	210, 1251
EcoRV	GATATC	1 cut(s)	840
EcoT14I	CCWWGG	2 cut(s)	1827, 2195
ErhI	CCWWGG	2 cut(s)	1827, 2195
FalI	AAGNNNNNCTT	2 cut(s)	260, 292
FaqI	GGGAC	2 cut(s)	16, 439
FbaI	TGATCA	1 cut(s)	1614
FblI	GTMKAC	1 cut(s)	2127
FokI	GGATG	5 cut(s)	869, 967, 1313, 1970, 2146
FspBI	CTAG	6 cut(s)	51, 747, 1640, 1941, 2078, 2084
GlaI	GCGC	5 cut(s)	156, 192, 734, 1071, 1994
GsaI	CCCAGC	2 cut(s)	474, 816
GsuI	CTGGAG	3 cut(s)	272, 1274, 1688
HaeII	RGCGCY	4 cut(s)	158, 194, 736, 1996
HaeIII	GGCC	6 cut(s)	134, 215, 729, 745, 1387, 2174
HapII	CCGG	5 cut(s)	169, 562, 854, 965, 1129
HgaI	GACGC	4 cut(s)	253, 276, 584, 1032
HhaI	GCGC	5 cut(s)	157, 193, 735, 1072, 1995
Hin1I	GRCGYC	3 cut(s)	287, 576, 1043
Hin6I	GCGC	5 cut(s)	155, 191, 733, 1070, 1993
HinP1I	GCGC	5 cut(s)	155, 191, 733, 1070, 1993
HpaII	CCGG	5 cut(s)	169, 562, 854, 965, 1129
HphI	GGTGA	8 cut(s)	115, 382, 653, 785, 979, 2082, 2183, 2264
Hpy166II	GTNNAC	6 cut(s)	1126, 1311, 1480, 1678, 2128, 2191
Hpy188III	TCNNGA	8 cut(s)	169, 205, 785, 1328, 1574, 1640, 1739, 2039
Hpy8I	GTNNAC	6 cut(s)	1126, 1311, 1480, 1678, 2128, 2191
Hpy99I	CGWCG	6 cut(s)	292, 352, 424, 578, 584, 1745
HpyAV	CCTTC	6 cut(s)	1162, 1291, 1652, 1745, 1879, 2243
HpyCH4III	ACNGT	9 cut(s)	127, 148, 529, 557, 587, 822, 1123, 1477, 1612
HpyCH4IV	ACGT	2 cut(s)	1192, 1564
HpyCH4V	TGCA	6 cut(s)	673, 929, 1126, 1548, 1718, 1965
HpyF10VI	GCNNNNNNNGC	5 cut(s)	140, 149, 163, 221, 364
HpyF3I	CTNAG	8 cut(s)	312, 801, 1293, 1431, 1849, 1971, 2094, 2114
HpySE526I	ACGT	2 cut(s)	1192, 1564
Hsp92I	GRCGYC	3 cut(s)	287, 576, 1043
HspAI	GCGC	5 cut(s)	155, 191, 733, 1070, 1993
Kpn2I	TCCGGA	1 cut(s)	168
Ksp22I	TGATCA	1 cut(s)	1614
LguI	GCTCTTC	2 cut(s)	164, 254
LmnI	GCTCC	4 cut(s)	171, 352, 429, 740
Lsp1109I	GCAGC	4 cut(s)	180, 259, 345, 1303
LweI	GCATC	2 cut(s)	1005, 1890
MaeI	CTAG	6 cut(s)	51, 747, 1640, 1941, 2078, 2084
MaeII	ACGT	2 cut(s)	1192, 1564
MaeIII	GTNAC	2 cut(s)	121, 2252
MflI	RGATCY	4 cut(s)	375, 1171, 1248, 2035
MhlI	GDGCHC	3 cut(s)	168, 562, 1128
MlyI	GAGTC	2 cut(s)	282, 2099
MmeI	TCCRAC	6 cut(s)	69, 126, 318, 402, 741, 876
MroI	TCCGGA	1 cut(s)	168
MroXI	GAANNNNTTC	4 cut(s)	569, 821, 974, 1425
MseI	TTAA	5 cut(s)	1200, 1364, 1755, 2022, 2264
MslI	CAYNNNNRTG	5 cut(s)	128, 996, 1131, 1182, 2066
MspA1I	CMGCKG	2 cut(s)	250, 358
MspI	CCGG	5 cut(s)	169, 562, 854, 965, 1129
MspR9I	CCNGG	3 cut(s)	212, 562, 1253
MvaI	CCWGG	2 cut(s)	212, 1253
MvnI	CGCG	2 cut(s)	299, 883
MwoI	GCNNNNNNNGC	5 cut(s)	140, 149, 163, 221, 364
NciI	CCSGG	1 cut(s)	562
NcoI	CCATGG	1 cut(s)	2195
NlaIV	GGNNCC	5 cut(s)	236, 354, 431, 559, 963
NmeAIII	GCCGAG	1 cut(s)	1969
NmuCI	GTSAC	2 cut(s)	121, 2252
NspI	RCATGY	2 cut(s)	929, 1001
OliI	CACNNNNGTG	1 cut(s)	128
PaeI	GCATGC	2 cut(s)	929, 1001
PagI	TCATGA	1 cut(s)	784
PaqCI	CACCTGC	1 cut(s)	379
PciSI	GCTCTTC	2 cut(s)	164, 254
PcsI	WCGNNNNNNNCGW	2 cut(s)	344, 579
PdmI	GAANNNNTTC	4 cut(s)	569, 821, 974, 1425
PfeI	GAWTC	8 cut(s)	509, 688, 863, 1628, 1636, 1765, 2087, 2138
Pfl23II	CGTACG	1 cut(s)	294
PflMI	CCANNNNNTGG	1 cut(s)	1821
PfoI	TCCNGGA	1 cut(s)	1251
PinAI	ACCGGT	1 cut(s)	1128
PleI	GAGTC	2 cut(s)	281, 2099
PpsI	GAGTC	2 cut(s)	281, 2099
PshAI	GACNNNNGTC	2 cut(s)	28, 704
PshBI	ATTAAT	1 cut(s)	1364
PsiI	TTATAA	1 cut(s)	1926
Psp6I	CCWGG	2 cut(s)	210, 1251
PspEI	GGTNACC	1 cut(s)	2252
PspFI	CCCAGC	2 cut(s)	470, 812
PspGI	CCWGG	2 cut(s)	210, 1251
PspLI	CGTACG	1 cut(s)	294
PspN4I	GGNNCC	5 cut(s)	236, 354, 431, 559, 963
PspPI	GGNCC	6 cut(s)	7, 133, 235, 1553, 1824, 2173
PsrI	GAACNNNNNNTAC	2 cut(s)	287, 319
PstI	CTGCAG	1 cut(s)	1550
PstNI	CAGNNNCTG	1 cut(s)	394
PsuI	RGATCY	4 cut(s)	375, 1171, 1248, 2035
PvuII	CAGCTG	1 cut(s)	250
RsaI	GTAC	7 cut(s)	113, 296, 344, 536, 1349, 1567, 1685
RsaNI	GTAC	7 cut(s)	112, 295, 343, 535, 1348, 1566, 1684
RseI	CAYNNNNRTG	5 cut(s)	128, 996, 1131, 1182, 2066
SapI	GCTCTTC	2 cut(s)	164, 254
SaqAI	TTAA	5 cut(s)	1200, 1364, 1755, 2022, 2264
Sau96I	GGNCC	6 cut(s)	7, 133, 235, 1553, 1824, 2173
SchI	GAGTC	2 cut(s)	282, 2099
ScrFI	CCNGG	3 cut(s)	212, 562, 1253
SduI	GDGCHC	3 cut(s)	168, 562, 1128
SfaNI	GCATC	2 cut(s)	1005, 1890
SfcI	CTRYAG	1 cut(s)	1546
SinI	GGWCC	4 cut(s)	7, 235, 1553, 1824
SmiMI	CAYNNNNRTG	5 cut(s)	128, 996, 1131, 1182, 2066
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
SphI	GCATGC	2 cut(s)	929, 1001
SsiI	CCGC	9 cut(s)	152, 188, 216, 245, 299, 356, 361, 398, 947
SspI	AATATT	2 cut(s)	1399, 1698
SspMI	CTAG	6 cut(s)	51, 747, 1640, 1941, 2078, 2084
StyD4I	CCNGG	3 cut(s)	210, 560, 1251
StyI	CCWWGG	2 cut(s)	1827, 2195
TaaI	ACNGT	9 cut(s)	127, 148, 529, 557, 587, 822, 1123, 1477, 1612
TaiI	ACGT	2 cut(s)	1195, 1567
TaqI	TCGA	6 cut(s)	63, 81, 279, 573, 1631, 1705
TatI	WGTACW	1 cut(s)	111
TauI	GCSGC	7 cut(s)	155, 191, 218, 247, 302, 358, 949
TfiI	GAWTC	8 cut(s)	509, 688, 863, 1628, 1636, 1765, 2087, 2138
Tru1I	TTAA	5 cut(s)	1200, 1364, 1755, 2022, 2264
Tru9I	TTAA	5 cut(s)	1200, 1364, 1755, 2022, 2264
TscAI	CASTG	3 cut(s)	805, 1395, 1555
TseFI	GTSAC	2 cut(s)	121, 2252
TseI	GCWGC	4 cut(s)	193, 247, 358, 1316
Tsp45I	GTSAC	2 cut(s)	121, 2252
TspDTI	ATGAA	7 cut(s)	814, 1166, 1439, 1500, 1987, 2148, 2212
TspGWI	ACGGA	3 cut(s)	365, 727, 1143
TspRI	CASTG	3 cut(s)	805, 1395, 1555
Van91I	CCANNNNNTGG	1 cut(s)	1821
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	4 cut(s)	7, 235, 1553, 1824
VspI	ATTAAT	1 cut(s)	1364
XapI	RAATTY	6 cut(s)	38, 970, 1202, 1421, 1495, 2098
XbaI	TCTAGA	1 cut(s)	1639
XceI	RCATGY	2 cut(s)	929, 1001
XmiI	GTMKAC	1 cut(s)	2127
XmnI	GAANNNNTTC	4 cut(s)	569, 821, 974, 1425
XspI	CTAG	6 cut(s)	51, 747, 1640, 1941, 2078, 2084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.