Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003598

Physical Location & Seq

Genomic Coordinates Forward (+)

16995519 .. 17002203

Gene Structure 6685 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032617

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGCCCCAAGATCTTCCTGGGTTTTATTATGATGCGGAGAAGAATAGGTACTTCCCCAACAAGGGCCCAGTACCCGGTTCTCGCAGTACTGCTGCTGCTGCTTCTTCTAGTGCTCAGAAACTGAACCAGGAAGCCAACAAATGTAAGCTAACAAAAGTAAGAACTTCTAAGCTGCTTCAGGCCAGAGAGTTATATGGTAATGTCATTGCTTCCGGTAAAGGGAGGTGTAACTTCAAGGAAGAATTCCAAAAGGCACAAGCATCCCATCCTGTGGTTTGGCAGTATCAGGGAACAAACAAGCTAGGTGATGGCGCTTTGGAGCGGATAAACATTGATGTACAGACAGGAGAGGGTTTAACTGATACAGATTTTCTATTAGCAGGTGGCAGAAATGGCTGTTTAAGTTTTTTTGAATTCGGCAAAGTCGGGCAGGGTTTCCATTATGGGATGAACTGCTTGCCAGATCTTGTCTGGCCTCTCTTAAACAAAAGTCAAGTAGAATATAGAAAAGCGCCTGGGCACATATGGAGACCAGCTCAAAATACACCACCGATGTCATCGAGTATATCTTGTATAAAAACATTTGGCAAGCACAGCACAGAAAATGATGGTTCTAGCATCCAGAATGCTCTGGTATCTACGCTGGGAGCCGACGACTGTGGTGGATCACTTTTTGTTGTTAACCTTACTGAACTCTTAGATTTTCGTCCAAATAGATCTATCTTAAGGCGGAACATTGATGAAGTTGCGACTTTCAACTGCACTGTTTGGACAGCAGATTGTAGATCTGATGGGAGTCGTGCAGTGATTGGAACCAATCTGGGAGCTGCTTTGGTGGATCTGGAAACTGGGGTGAAATCATGGCTGCTGCGTGGTAAAAGTGATGTTTTGGCACAACAACTTGTTCACTCGGGAAATGTTGTTTTATGTGGACTCAGAAATGGAGCGATTGTAACGGTTGATGTTCGTGAGAAATGGGAAGGATTTTCTGCAAGACATGCTAGTCATAGAATACGGCACTCACCTTTGGATAGCACTCGTGGAAAATCTAGTGAAAAATGGTTCAAGCTTTCTGGAAATATACATCCTTCTCATACCATAAAAATGCCTTCATCTATTGCATGTTTAGTATCGCTTCAGTTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGAACGGTGAAGCTTTATGACCATCGCATAATCCAAAGAGGAGCTATCCAAACTTATGAGGGGCATGTGAATTCCCATACTCGTTTGCAACTTGGAGTTGATCCATCTGAGCGATTTTTTATATCGGGTGGAGAGGACTGCAATTTAAGACTCTGGAGTATAAAGTCAGGTGAACTTCTTTTTGAGGATAAGTTAACAAATACAGTCACCCCAACTGTGTGCTGGCAAAAAGCTGAGGCGTTTAAAGGATTGCAGGATGAAAGGCAAAGCTATGACAATGTTAAACATAATAGCTTGGGGGCTTGGCTTGGATCGGCAGAAGGAATATTTTACGTGGACTGGGAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005682 GO:0006139 GO:0006396 GO:0006464 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0019538 GO:0030532 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1901564 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

509

Amino Acids

56.19

Weight (kDa)

8.35

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	282 - 468	1.1e-06	THOC3 beta-propeller domain
Beta-prop_DCAF4	PF23761	371 - 452	3.9e-13	DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_WDR5	PF25175	377 - 456	7.1e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003598)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17370 AT5G17370
fragaria_vesca	FvH4_3g13240 FvH4_3g13240 FvH4_3g13240 FvH4_3g13240 FvH4_3g13240
malus_domestica	MD05G1243800.v1.1
prunus_persica	Prupe.4G119800_v2.0.a1 Prupe.4G119800_v2.0.a1 Prupe.4G119800_v2.0.a1 Prupe.4G119800_v2.0.a1
pyrus_communis	pycom05g22030 pycom10g18960
rosa_chinensis	RchiOBHm_Chr5g0021601 RchiOBHm_Chr5g0021611 RchiOBHm_Chr5g0021701
rosa_laevigata	RLG00000032617
rosa_multiflora	Rmu_sc0009984.1_g000013 Rmu_sc0016972.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057050 Rroxscaffold_2G00125890 Rroxscaffold_3G00228540 Rroxscaffold_3G00229610 Rroxscaffold_4G00317430
rosa_rugosa	Rorug05G0067600 Rorug05G0067700 Rorug05G0067800
rosa_samantha	Rh5AG157000 Rh5BG156500 Rh5CG170800 Rh5DG156800
rosa_wichuraiana	Rw0G000530 Rw0G007040 Rw5G013950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	371
AasI	GACNNNNNNGTC	1 cut(s)	1002
Acc36I	ACCTGC	1 cut(s)	371
AccB7I	CCANNNNNTGG	1 cut(s)	271
AccBSI	CCGCTC	1 cut(s)	322
AciI	CCGC	3 cut(s)	35, 322, 730
AclWI	GGATC	4 cut(s)	673, 846, 1271, 1495
AcsI	RAATTY	3 cut(s)	242, 413, 1246
AcuI	CTGAAG	2 cut(s)	161, 1121
AfaI	GTAC	5 cut(s)	50, 72, 88, 339, 1154
AfiI	CCNNNNNNNGG	5 cut(s)	61, 62, 74, 219, 271
AflII	CTTAAG	1 cut(s)	724
AgsI	TTSAA	4 cut(s)	235, 413, 757, 1066
AjnI	CCWGG	3 cut(s)	16, 126, 514
Alw21I	GWGCWC	1 cut(s)	115
Alw26I	GTCTC	1 cut(s)	523
AlwI	GGATC	4 cut(s)	673, 846, 1271, 1495
AlwNI	CAGNNNCTG	1 cut(s)	121
Ama87I	CYCGRG	1 cut(s)	910
AoxI	GGCC	3 cut(s)	64, 180, 473
ApaI	GGGCCC	1 cut(s)	68
ApeKI	GCWGC	7 cut(s)	92, 95, 98, 172, 827, 865, 868
ApoI	RAATTY	3 cut(s)	242, 413, 1246
AspLEI	GCGC	2 cut(s)	314, 514
AspS9I	GGNCC	2 cut(s)	64, 65
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	6 cut(s)	317, 865, 1014, 1195, 1358, 1375
AvaI	CYCGRG	1 cut(s)	910
BaeGI	GKGCMC	2 cut(s)	68, 522
BanII	GRGCYC	1 cut(s)	68
BarI	GAAGNNNNNNTAC	2 cut(s)	32, 64
BauI	CACGAG	1 cut(s)	1038
Bbv12I	GWGCWC	1 cut(s)	115
BbvCI	CCTCAGC	1 cut(s)	1410
BbvI	GCAGC	7 cut(s)	79, 82, 85, 159, 814, 852, 855
BccI	CCATC	7 cut(s)	273, 302, 602, 785, 1169, 1206, 1288
BceAI	ACGGC	1 cut(s)	1031
BciT130I	CCWGG	3 cut(s)	18, 128, 516
BclI	TGATCA	1 cut(s)	1147
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	1 cut(s)	523
BfaI	CTAG	5 cut(s)	108, 302, 615, 1002, 1050
BfoI	RGCGCY	2 cut(s)	315, 515
BfrI	CTTAAG	1 cut(s)	724
BfuAI	ACCTGC	1 cut(s)	371
BglII	AGATCT	4 cut(s)	10, 463, 716, 785
BisI	GCNGC	7 cut(s)	93, 96, 99, 173, 828, 866, 869
BlsI	GCNGC	7 cut(s)	94, 97, 100, 174, 829, 867, 870
BmcAI	AGTACT	2 cut(s)	88, 1154
Bme1390I	CCNGG	4 cut(s)	18, 75, 128, 516
BmeT110I	CYCGRG	1 cut(s)	910
BmgT120I	GGNCC	2 cut(s)	64, 65
BmiI	GGNNCC	3 cut(s)	66, 649, 814
BmrFI	CCNGG	4 cut(s)	18, 75, 128, 516
BmrI	ACTGGG	3 cut(s)	62, 858, 1525
BmsI	GCATC	3 cut(s)	22, 269, 627
BmuI	ACTGGG	3 cut(s)	62, 858, 1525
BplI	GAGNNNNNCTC	2 cut(s)	520, 552
BpmI	CTGGAG	1 cut(s)	1351
Bpu10I	CCTNAGC	1 cut(s)	1410
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	1510
BsaI	GGTCTC	1 cut(s)	523
BsaJI	CCNNGG	3 cut(s)	17, 515, 1170
BsaWI	WCCGGW	1 cut(s)	212
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 62, 74, 219, 271
Bse1I	ACTGG	3 cut(s)	68, 853, 1520
Bse3DI	GCAATG	1 cut(s)	204
BseBI	CCWGG	3 cut(s)	18, 128, 516
BseDI	CCNNGG	3 cut(s)	17, 515, 1170
BseGI	GGATG	7 cut(s)	260, 265, 453, 618, 1084, 1180, 1438
BseLI	CCNNNNNNNGG	5 cut(s)	61, 62, 74, 219, 271
BseMI	GCAATG	1 cut(s)	204
BseMII	CTCAG	4 cut(s)	128, 949, 1275, 1401
BseNI	ACTGG	3 cut(s)	68, 853, 1520
BseRI	GAGGAG	1 cut(s)	1230
BseSI	GKGCMC	2 cut(s)	68, 522
BseXI	GCAGC	7 cut(s)	79, 82, 85, 159, 814, 852, 855
BseYI	CCCAGC	1 cut(s)	643
BsgI	GTGCAG	2 cut(s)	745, 822
BshFI	GGCC	3 cut(s)	66, 182, 475
BsiHKAI	GWGCWC	1 cut(s)	115
BsiHKCI	CYCGRG	1 cut(s)	910
BsiSI	CCGG	2 cut(s)	75, 213
BslI	CCNNNNNNNGG	5 cut(s)	61, 62, 74, 219, 271
BsmAI	GTCTC	1 cut(s)	523
BsmI	GAATGC	1 cut(s)	631
BsnI	GGCC	3 cut(s)	66, 182, 475
Bso31I	GGTCTC	1 cut(s)	523
BsoBI	CYCGRG	1 cut(s)	910
Bsp120I	GGGCCC	1 cut(s)	64
Bsp1286I	GDGCHC	3 cut(s)	68, 115, 522
Bsp1407I	TGTACA	1 cut(s)	337
Bsp143I	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
Bsp19I	CCATGG	1 cut(s)	1170
BspACI	CCGC	3 cut(s)	35, 322, 730
BspANI	GGCC	3 cut(s)	66, 182, 475
BspCNI	CTCAG	4 cut(s)	127, 948, 1276, 1402
BspLI	GGNNCC	3 cut(s)	66, 649, 814
BspMI	ACCTGC	1 cut(s)	371
BspPI	GGATC	4 cut(s)	673, 846, 1271, 1495
BspTI	CTTAAG	1 cut(s)	724
BspTNI	GGTCTC	1 cut(s)	523
BsrBI	CCGCTC	1 cut(s)	322
BsrDI	GCAATG	1 cut(s)	204
BsrGI	TGTACA	1 cut(s)	337
BsrI	ACTGG	3 cut(s)	68, 853, 1520
BssECI	CCNNGG	3 cut(s)	17, 515, 1170
BssMI	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
BssSI	CACGAG	1 cut(s)	1038
BssT1I	CCWWGG	1 cut(s)	1170
Bst2BI	CACGAG	1 cut(s)	1038
Bst2UI	CCWGG	3 cut(s)	18, 128, 516
Bst4CI	ACNGT	6 cut(s)	659, 766, 958, 1183, 1381, 1393
BstAFI	CTTAAG	1 cut(s)	724
BstAPI	GCANNNNNTGC	1 cut(s)	998
BstAUI	TGTACA	1 cut(s)	337
BstBAI	YACGTR	1 cut(s)	1510
BstC8I	GCNNGC	4 cut(s)	458, 590, 1165, 1400
BstDEI	CTNAG	6 cut(s)	114, 168, 697, 935, 1284, 1410
BstDSI	CCRYGG	1 cut(s)	1170
BstF5I	GGATG	7 cut(s)	260, 265, 453, 618, 1084, 1180, 1438
BstH2I	RGCGCY	2 cut(s)	315, 515
BstHHI	GCGC	2 cut(s)	314, 514
BstKTI	GATC	9 cut(s)	13, 466, 668, 719, 788, 841, 1150, 1279, 1490
BstMAI	GTCTC	1 cut(s)	523
BstMBI	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
BstMWI	GCNNNNNNNGC	4 cut(s)	98, 393, 594, 998
BstNI	CCWGG	3 cut(s)	18, 128, 516
BstNSI	RCATGY	3 cut(s)	1001, 1125, 1244
BstSCI	CCNGG	4 cut(s)	16, 73, 126, 514
BstSLI	GKGCMC	2 cut(s)	68, 522
BstV1I	GCAGC	7 cut(s)	79, 82, 85, 159, 814, 852, 855
BstX2I	RGATCY	5 cut(s)	10, 463, 716, 785, 838
BstYI	RGATCY	5 cut(s)	10, 463, 716, 785, 838
BsuRI	GGCC	3 cut(s)	66, 182, 475
BtgI	CCRYGG	1 cut(s)	1170
BtgZI	GCGATG	1 cut(s)	1184
BtsCI	GGATG	7 cut(s)	260, 265, 453, 618, 1084, 1180, 1438
BtsI	GCAGTG	1 cut(s)	810
BtsIMutI	CAGTG	2 cut(s)	762, 810
BveI	ACCTGC	1 cut(s)	371
Cac8I	GCNNGC	4 cut(s)	458, 590, 1165, 1400
CaiI	CAGNNNCTG	1 cut(s)	121
CfoI	GCGC	2 cut(s)	314, 514
Cfr13I	GGNCC	2 cut(s)	64, 65
Csp6I	GTAC	5 cut(s)	49, 71, 87, 338, 1153
CviAII	CATG	5 cut(s)	861, 998, 1122, 1171, 1241
CviQI	GTAC	5 cut(s)	49, 71, 87, 338, 1153
DdeI	CTNAG	6 cut(s)	114, 168, 697, 935, 1284, 1410
DpnI	GATC	9 cut(s)	12, 465, 667, 718, 787, 840, 1149, 1278, 1489
DpnII	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
DraI	TTTAAA	1 cut(s)	1420
DrdI	GACNNNNNNGTC	1 cut(s)	1002
DseDI	GACNNNNNNGTC	1 cut(s)	1002
EciI	GGCGGA	1 cut(s)	745
Eco130I	CCWWGG	1 cut(s)	1170
Eco24I	GRGCYC	1 cut(s)	68
Eco31I	GGTCTC	1 cut(s)	523
Eco57I	CTGAAG	2 cut(s)	161, 1121
Eco88I	CYCGRG	1 cut(s)	910
EcoO109I	RGGNCCY	1 cut(s)	64
EcoRI	GAATTC	3 cut(s)	242, 413, 1246
EcoRII	CCWGG	3 cut(s)	16, 126, 514
EcoT14I	CCWWGG	1 cut(s)	1170
EcoT38I	GRGCYC	1 cut(s)	68
ErhI	CCWWGG	1 cut(s)	1170
FaeI	CATG	5 cut(s)	864, 1001, 1125, 1174, 1244
FatI	CATG	5 cut(s)	860, 997, 1121, 1170, 1240
FauNDI	CATATG	1 cut(s)	524
FbaI	TGATCA	1 cut(s)	1147
Fnu4HI	GCNGC	7 cut(s)	93, 96, 99, 173, 828, 866, 869
FokI	GGATG	7 cut(s)	247, 252, 460, 605, 1071, 1187, 1445
FriOI	GRGCYC	1 cut(s)	68
Fsp4HI	GCNGC	7 cut(s)	93, 96, 99, 173, 828, 866, 869
FspBI	CTAG	5 cut(s)	108, 302, 615, 1002, 1050
GlaI	GCGC	2 cut(s)	313, 513
GluI	GCNGC	7 cut(s)	93, 96, 99, 173, 828, 866, 869
GsaI	CCCAGC	1 cut(s)	647
GsuI	CTGGAG	1 cut(s)	1351
HaeII	RGCGCY	2 cut(s)	315, 515
HaeIII	GGCC	3 cut(s)	66, 182, 475
HapII	CCGG	2 cut(s)	75, 213
HhaI	GCGC	2 cut(s)	314, 514
Hin1II	CATG	5 cut(s)	864, 1001, 1125, 1174, 1244
Hin6I	GCGC	2 cut(s)	312, 512
HinP1I	GCGC	2 cut(s)	312, 512
HincII	GTYRAC	2 cut(s)	682, 1371
HindII	GTYRAC	2 cut(s)	682, 1371
HindIII	AAGCTT	2 cut(s)	1067, 1187
HinfI	GANTC	3 cut(s)	796, 933, 1326
HpaI	GTTAAC	2 cut(s)	682, 1371
HpaII	CCGG	2 cut(s)	75, 213
HphI	GGTGA	6 cut(s)	317, 865, 1014, 1195, 1358, 1375
Hpy166II	GTNNAC	6 cut(s)	682, 907, 932, 1349, 1371, 1513
Hpy188I	TCNGA	4 cut(s)	117, 790, 938, 1285
Hpy188III	TCNNGA	6 cut(s)	622, 842, 912, 968, 1074, 1330
Hpy8I	GTNNAC	6 cut(s)	682, 907, 932, 1349, 1371, 1513
Hpy99I	CGWCG	1 cut(s)	656
HpyAV	CCTTC	4 cut(s)	974, 1098, 1119, 1490
HpyCH4III	ACNGT	6 cut(s)	659, 766, 958, 1183, 1381, 1393
HpyCH4IV	ACGT	1 cut(s)	1509
HpyCH4V	TGCA	7 cut(s)	762, 803, 992, 1121, 1264, 1317, 1429
HpyF10VI	GCNNNNNNNGC	4 cut(s)	98, 393, 594, 998
HpyF3I	CTNAG	6 cut(s)	114, 168, 697, 935, 1284, 1410
HpySE526I	ACGT	1 cut(s)	1509
Hsp92II	CATG	5 cut(s)	864, 1001, 1125, 1174, 1244
HspAI	GCGC	2 cut(s)	312, 512
Ksp22I	TGATCA	1 cut(s)	1147
KspAI	GTTAAC	2 cut(s)	682, 1371
Kzo9I	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
LmnI	GCTCC	6 cut(s)	319, 647, 824, 944, 1172, 1217
Lsp1109I	GCAGC	7 cut(s)	79, 82, 85, 159, 814, 852, 855
LweI	GCATC	3 cut(s)	22, 269, 627
MaeI	CTAG	5 cut(s)	108, 302, 615, 1002, 1050
MaeII	ACGT	1 cut(s)	1509
MaeIII	GTNAC	3 cut(s)	227, 952, 1381
MalI	GATC	9 cut(s)	12, 465, 667, 718, 787, 840, 1149, 1278, 1489
MbiI	CCGCTC	1 cut(s)	322
MboI	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
MboII	GAAGA	4 cut(s)	5, 52, 96, 251
MflI	RGATCY	5 cut(s)	10, 463, 716, 785, 838
MhlI	GDGCHC	3 cut(s)	68, 115, 522
MluCI	AATT	4 cut(s)	242, 413, 1246, 1318
MlyI	GAGTC	3 cut(s)	805, 927, 1320
MnlI	CCTC	8 cut(s)	216, 343, 486, 1208, 1228, 1303, 1354, 1405
MseI	TTAA	9 cut(s)	356, 401, 482, 681, 725, 1322, 1370, 1419, 1458
MslI	CAYNNNNRTG	1 cut(s)	1103
MspCI	CTTAAG	1 cut(s)	724
MspI	CCGG	2 cut(s)	75, 213
MspR9I	CCNGG	4 cut(s)	18, 75, 128, 516
Mva1269I	GAATGC	1 cut(s)	631
MvaI	CCWGG	3 cut(s)	18, 128, 516
MwoI	GCNNNNNNNGC	4 cut(s)	98, 393, 594, 998
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	1 cut(s)	1170
NdeI	CATATG	1 cut(s)	524
NdeII	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
NlaIII	CATG	5 cut(s)	864, 1001, 1125, 1174, 1244
NlaIV	GGNNCC	3 cut(s)	66, 649, 814
NmuCI	GTSAC	1 cut(s)	1381
NspI	RCATGY	3 cut(s)	1001, 1125, 1244
PaqCI	CACCTGC	1 cut(s)	371
PctI	GAATGC	1 cut(s)	631
PflMI	CCANNNNNTGG	1 cut(s)	271
PkrI	GCNGC	7 cut(s)	94, 97, 100, 174, 829, 867, 870
PleI	GAGTC	3 cut(s)	804, 927, 1320
PpsI	GAGTC	3 cut(s)	804, 927, 1320
Ppu21I	YACGTR	1 cut(s)	1510
Psp6I	CCWGG	3 cut(s)	16, 126, 514
PspFI	CCCAGC	1 cut(s)	643
PspGI	CCWGG	3 cut(s)	16, 126, 514
PspN4I	GGNNCC	3 cut(s)	66, 649, 814
PspOMI	GGGCCC	1 cut(s)	64
PspPI	GGNCC	2 cut(s)	64, 65
PstNI	CAGNNNCTG	1 cut(s)	121
PsuI	RGATCY	5 cut(s)	10, 463, 716, 785, 838
RsaI	GTAC	5 cut(s)	50, 72, 88, 339, 1154
RsaNI	GTAC	5 cut(s)	49, 71, 87, 338, 1153
RseI	CAYNNNNRTG	1 cut(s)	1103
SaqAI	TTAA	9 cut(s)	356, 401, 482, 681, 725, 1322, 1370, 1419, 1458
SatI	GCNGC	7 cut(s)	93, 96, 99, 173, 828, 866, 869
Sau3AI	GATC	9 cut(s)	10, 463, 665, 716, 785, 838, 1147, 1276, 1487
Sau96I	GGNCC	2 cut(s)	64, 65
ScaI	AGTACT	2 cut(s)	88, 1154
SchI	GAGTC	3 cut(s)	805, 927, 1320
ScrFI	CCNGG	4 cut(s)	18, 75, 128, 516
SduI	GDGCHC	3 cut(s)	68, 115, 522
SfaNI	GCATC	3 cut(s)	22, 269, 627
SmiMI	CAYNNNNRTG	1 cut(s)	1103
SmlI	CTYRAG	1 cut(s)	724
SmoI	CTYRAG	1 cut(s)	724
Sse9I	AATT	4 cut(s)	242, 413, 1246, 1318
SsiI	CCGC	3 cut(s)	35, 322, 730
SspI	AATATT	1 cut(s)	1503
SspMI	CTAG	5 cut(s)	108, 302, 615, 1002, 1050
StyD4I	CCNGG	4 cut(s)	16, 73, 126, 514
StyI	CCWWGG	1 cut(s)	1170
TaaI	ACNGT	6 cut(s)	659, 766, 958, 1183, 1381, 1393
TaiI	ACGT	1 cut(s)	1512
TaqI	TCGA	1 cut(s)	560
TasI	AATT	4 cut(s)	242, 413, 1246, 1318
TatI	WGTACW	3 cut(s)	86, 337, 1152
Tru1I	TTAA	9 cut(s)	356, 401, 482, 681, 725, 1322, 1370, 1419, 1458
Tru9I	TTAA	9 cut(s)	356, 401, 482, 681, 725, 1322, 1370, 1419, 1458
TscAI	CASTG	2 cut(s)	769, 810
TseFI	GTSAC	1 cut(s)	1381
TseI	GCWGC	7 cut(s)	92, 95, 98, 172, 827, 865, 868
Tsp45I	GTSAC	1 cut(s)	1381
TspDTI	ATGAA	4 cut(s)	464, 756, 1101, 1449
TspRI	CASTG	2 cut(s)	769, 810
Van91I	CCANNNNNTGG	1 cut(s)	271
Vha464I	CTTAAG	1 cut(s)	724
XapI	RAATTY	3 cut(s)	242, 413, 1246
XceI	RCATGY	3 cut(s)	1001, 1125, 1244
XcmI	CCANNNNNNNNNTGG	3 cut(s)	14, 468, 1395
XspI	CTAG	5 cut(s)	108, 302, 615, 1002, 1050
ZrmI	AGTACT	2 cut(s)	88, 1154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.