No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79200 |
| fragaria_vesca | FvH4_3g15210 |
| malus_domestica | MD05G1224500.v1.1 MD10G1206200.v1.1 |
| prunus_persica | Prupe.4G136100_v2.0.a1 Prupe.4G136100_v2.0.a1 Prupe.4G136100_v2.0.a1 |
| pyrus_communis | pycom05g20710 pycom10g17600 |
| rosa_chinensis | RchiOBHm_Chr5g0025651 |
| rosa_laevigata | RLG00000032855 |
| rosa_multiflora | Rmu_sc0002137.1_g000003 Rmu_sc0018566.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00053520 Rroxscaffold_1G00054200 |
| rosa_rugosa | Rorug05G0087500 |
| rosa_samantha | Rh5AG179300 Rh5BG178400 Rh5CG196000 Rh5DG177600 |
| rosa_wichuraiana | Rw5G016280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 70 |
| Acc36I | ACCTGC | 1 cut(s) | 70 |
| AciI | CCGC | 1 cut(s) | 205 |
| AclWI | GGATC | 1 cut(s) | 214 |
| AgsI | TTSAA | 3 cut(s) | 211, 377, 401 |
| AluBI | AGCT | 3 cut(s) | 51, 356, 373 |
| AluI | AGCT | 3 cut(s) | 51, 356, 373 |
| Alw21I | GWGCWC | 1 cut(s) | 53 |
| AlwI | GGATC | 1 cut(s) | 214 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 323 |
| AsuC2I | CCSGG | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 2 cut(s) | 51, 248 |
| BanII | GRGCYC | 1 cut(s) | 53 |
| BbsI | GAAGAC | 1 cut(s) | 179 |
| Bbv12I | GWGCWC | 1 cut(s) | 53 |
| BcnI | CCSGG | 1 cut(s) | 412 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BfuAI | ACCTGC | 1 cut(s) | 70 |
| BisI | GCNGC | 1 cut(s) | 205 |
| BlsI | GCNGC | 1 cut(s) | 206 |
| Bme1390I | CCNGG | 1 cut(s) | 412 |
| BmrFI | CCNGG | 1 cut(s) | 412 |
| BpiI | GAAGAC | 1 cut(s) | 179 |
| BpuMI | CCSGG | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 1 cut(s) | 410 |
| BsaWI | WCCGGW | 2 cut(s) | 19, 233 |
| BseDI | CCNNGG | 1 cut(s) | 410 |
| BseGI | GGATG | 1 cut(s) | 112 |
| BseRI | GAGGAG | 1 cut(s) | 38 |
| BsgI | GTGCAG | 3 cut(s) | 48, 309, 390 |
| BsiHKAI | GWGCWC | 1 cut(s) | 53 |
| BsiSI | CCGG | 3 cut(s) | 20, 234, 412 |
| Bsp1286I | GDGCHC | 1 cut(s) | 53 |
| Bsp143I | GATC | 3 cut(s) | 143, 219, 307 |
| BspACI | CCGC | 1 cut(s) | 205 |
| BspMAI | CTGCAG | 1 cut(s) | 319 |
| BspMI | ACCTGC | 1 cut(s) | 70 |
| BspPI | GGATC | 1 cut(s) | 214 |
| BspQI | GCTCTTC | 1 cut(s) | 58 |
| BssECI | CCNNGG | 1 cut(s) | 410 |
| BssMI | GATC | 3 cut(s) | 143, 219, 307 |
| Bst4CI | ACNGT | 3 cut(s) | 100, 231, 336 |
| Bst6I | CTCTTC | 3 cut(s) | 29, 58, 279 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 323 |
| BstDEI | CTNAG | 1 cut(s) | 252 |
| BstF5I | GGATG | 1 cut(s) | 112 |
| BstKTI | GATC | 3 cut(s) | 146, 222, 310 |
| BstMBI | GATC | 3 cut(s) | 143, 219, 307 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 323 |
| BstSCI | CCNGG | 1 cut(s) | 410 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstV2I | GAAGAC | 1 cut(s) | 179 |
| BstX2I | RGATCY | 1 cut(s) | 219 |
| BstYI | RGATCY | 1 cut(s) | 219 |
| BtgZI | GCGATG | 1 cut(s) | 185 |
| BtsCI | GGATG | 1 cut(s) | 112 |
| BveI | ACCTGC | 1 cut(s) | 70 |
| CaiI | CAGNNNCTG | 1 cut(s) | 323 |
| CviJI | RGCY | 4 cut(s) | 51, 277, 356, 373 |
| CviKI_1 | RGCY | 4 cut(s) | 51, 277, 356, 373 |
| DdeI | CTNAG | 1 cut(s) | 252 |
| DpnI | GATC | 3 cut(s) | 145, 221, 309 |
| DpnII | GATC | 3 cut(s) | 143, 219, 307 |
| Eam1104I | CTCTTC | 3 cut(s) | 29, 58, 279 |
| EarI | CTCTTC | 3 cut(s) | 29, 58, 279 |
| Ecl136II | GAGCTC | 1 cut(s) | 51 |
| Eco24I | GRGCYC | 1 cut(s) | 53 |
| Eco53kI | GAGCTC | 1 cut(s) | 51 |
| EcoICRI | GAGCTC | 1 cut(s) | 51 |
| EcoT38I | GRGCYC | 1 cut(s) | 53 |
| FaiI | YATR | 4 cut(s) | 93, 150, 189, 423 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 37, 69 |
| Fnu4HI | GCNGC | 1 cut(s) | 205 |
| FokI | GGATG | 1 cut(s) | 119 |
| FriOI | GRGCYC | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 205 |
| GluI | GCNGC | 1 cut(s) | 205 |
| HapII | CCGG | 3 cut(s) | 20, 234, 412 |
| HindIII | AAGCTT | 2 cut(s) | 354, 371 |
| HinfI | GANTC | 2 cut(s) | 320, 377 |
| HpaII | CCGG | 3 cut(s) | 20, 234, 412 |
| HphI | GGTGA | 2 cut(s) | 51, 248 |
| Hpy166II | GTNNAC | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 3 cut(s) | 160, 307, 343 |
| Hpy188III | TCNNGA | 1 cut(s) | 381 |
| Hpy8I | GTNNAC | 1 cut(s) | 197 |
| HpyCH4III | ACNGT | 3 cut(s) | 100, 231, 336 |
| HpyCH4V | TGCA | 4 cut(s) | 65, 317, 326, 407 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 323 |
| HpyF3I | CTNAG | 1 cut(s) | 252 |
| Kzo9I | GATC | 3 cut(s) | 143, 219, 307 |
| LguI | GCTCTTC | 1 cut(s) | 58 |
| LmnI | GCTCC | 1 cut(s) | 48 |
| LpnPI | CCDG | 5 cut(s) | 33, 75, 247, 394, 425 |
| MaeIII | GTNAC | 1 cut(s) | 131 |
| MalI | GATC | 3 cut(s) | 145, 221, 309 |
| MboI | GATC | 3 cut(s) | 143, 219, 307 |
| MboII | GAAGA | 8 cut(s) | 40, 43, 45, 46, 48, 184, 292, 296 |
| MflI | RGATCY | 1 cut(s) | 219 |
| MhlI | GDGCHC | 1 cut(s) | 53 |
| MluCI | AATT | 1 cut(s) | 424 |
| MnlI | CCTC | 7 cut(s) | 16, 67, 81, 97, 103, 286, 385 |
| MspI | CCGG | 3 cut(s) | 20, 234, 412 |
| MspR9I | CCNGG | 1 cut(s) | 412 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 323 |
| NciI | CCSGG | 1 cut(s) | 412 |
| NdeII | GATC | 3 cut(s) | 143, 219, 307 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| PaqCI | CACCTGC | 1 cut(s) | 70 |
| PciSI | GCTCTTC | 1 cut(s) | 58 |
| PfeI | GAWTC | 2 cut(s) | 320, 377 |
| PkrI | GCNGC | 1 cut(s) | 206 |
| Psp124BI | GAGCTC | 1 cut(s) | 53 |
| PstI | CTGCAG | 1 cut(s) | 319 |
| PstNI | CAGNNNCTG | 1 cut(s) | 323 |
| PsuI | RGATCY | 1 cut(s) | 219 |
| SacI | GAGCTC | 1 cut(s) | 53 |
| SapI | GCTCTTC | 1 cut(s) | 58 |
| SatI | GCNGC | 1 cut(s) | 205 |
| Sau3AI | GATC | 3 cut(s) | 143, 219, 307 |
| ScrFI | CCNGG | 1 cut(s) | 412 |
| SduI | GDGCHC | 1 cut(s) | 53 |
| SetI | ASST | 6 cut(s) | 53, 64, 85, 297, 358, 375 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| Sse9I | AATT | 1 cut(s) | 424 |
| SsiI | CCGC | 1 cut(s) | 205 |
| SstI | GAGCTC | 1 cut(s) | 53 |
| StyD4I | CCNGG | 1 cut(s) | 410 |
| TaaI | ACNGT | 3 cut(s) | 100, 231, 336 |
| TasI | AATT | 1 cut(s) | 424 |
| TauI | GCSGC | 1 cut(s) | 207 |
| TfiI | GAWTC | 2 cut(s) | 320, 377 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |