No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79200 |
| fragaria_vesca | FvH4_3g15210 |
| malus_domestica | MD05G1224500.v1.1 MD10G1206200.v1.1 |
| prunus_persica | Prupe.4G136100_v2.0.a1 Prupe.4G136100_v2.0.a1 Prupe.4G136100_v2.0.a1 |
| pyrus_communis | pycom05g20710 pycom10g17600 |
| rosa_chinensis | RchiOBHm_Chr5g0025651 |
| rosa_laevigata | RLG00000032855 |
| rosa_multiflora | Rmu_sc0002137.1_g000003 Rmu_sc0018566.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00053520 Rroxscaffold_1G00054200 |
| rosa_rugosa | Rorug05G0087500 |
| rosa_samantha | Rh5AG179300 Rh5BG178400 Rh5CG196000 Rh5DG177600 |
| rosa_wichuraiana | Rw5G016280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 223 |
| AclWI | GGATC | 1 cut(s) | 232 |
| AgsI | TTSAA | 3 cut(s) | 229, 395, 419 |
| AhlI | ACTAGT | 1 cut(s) | 106 |
| AluBI | AGCT | 3 cut(s) | 172, 374, 391 |
| AluI | AGCT | 3 cut(s) | 172, 374, 391 |
| AlwI | GGATC | 1 cut(s) | 232 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 341 |
| AsuC2I | CCSGG | 1 cut(s) | 430 |
| AsuHPI | GGTGA | 1 cut(s) | 266 |
| BbsI | GAAGAC | 1 cut(s) | 197 |
| BceAI | ACGGC | 1 cut(s) | 362 |
| BcnI | CCSGG | 1 cut(s) | 430 |
| BcuI | ACTAGT | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 107 |
| BfmI | CTRYAG | 1 cut(s) | 333 |
| BisI | GCNGC | 1 cut(s) | 223 |
| BlsI | GCNGC | 1 cut(s) | 224 |
| Bme1390I | CCNGG | 1 cut(s) | 430 |
| BmrFI | CCNGG | 1 cut(s) | 430 |
| BpiI | GAAGAC | 1 cut(s) | 197 |
| BpuMI | CCSGG | 1 cut(s) | 430 |
| BsaJI | CCNNGG | 1 cut(s) | 428 |
| BsaWI | WCCGGW | 1 cut(s) | 251 |
| BseDI | CCNNGG | 1 cut(s) | 428 |
| BsgI | GTGCAG | 2 cut(s) | 327, 408 |
| BsiSI | CCGG | 2 cut(s) | 252, 430 |
| Bsp143I | GATC | 3 cut(s) | 161, 237, 325 |
| BspACI | CCGC | 1 cut(s) | 223 |
| BspMAI | CTGCAG | 1 cut(s) | 337 |
| BspPI | GGATC | 1 cut(s) | 232 |
| BssECI | CCNNGG | 1 cut(s) | 428 |
| BssMI | GATC | 3 cut(s) | 161, 237, 325 |
| Bst4CI | ACNGT | 3 cut(s) | 27, 249, 354 |
| Bst6I | CTCTTC | 1 cut(s) | 297 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 341 |
| BstDEI | CTNAG | 1 cut(s) | 270 |
| BstKTI | GATC | 3 cut(s) | 164, 240, 328 |
| BstMBI | GATC | 3 cut(s) | 161, 237, 325 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 341 |
| BstSCI | CCNGG | 1 cut(s) | 428 |
| BstSFI | CTRYAG | 1 cut(s) | 333 |
| BstV2I | GAAGAC | 1 cut(s) | 197 |
| BstX2I | RGATCY | 1 cut(s) | 237 |
| BstYI | RGATCY | 1 cut(s) | 237 |
| BtgZI | GCGATG | 1 cut(s) | 203 |
| CaiI | CAGNNNCTG | 1 cut(s) | 341 |
| CviJI | RGCY | 6 cut(s) | 22, 132, 172, 295, 374, 391 |
| CviKI_1 | RGCY | 6 cut(s) | 22, 132, 172, 295, 374, 391 |
| DdeI | CTNAG | 1 cut(s) | 270 |
| DpnI | GATC | 3 cut(s) | 163, 239, 327 |
| DpnII | GATC | 3 cut(s) | 161, 237, 325 |
| Eam1104I | CTCTTC | 1 cut(s) | 297 |
| EarI | CTCTTC | 1 cut(s) | 297 |
| FaiI | YATR | 5 cut(s) | 58, 102, 168, 207, 441 |
| Fnu4HI | GCNGC | 1 cut(s) | 223 |
| Fsp4HI | GCNGC | 1 cut(s) | 223 |
| FspBI | CTAG | 1 cut(s) | 107 |
| GluI | GCNGC | 1 cut(s) | 223 |
| HapII | CCGG | 2 cut(s) | 252, 430 |
| HindIII | AAGCTT | 2 cut(s) | 372, 389 |
| HinfI | GANTC | 2 cut(s) | 338, 395 |
| HpaII | CCGG | 2 cut(s) | 252, 430 |
| HphI | GGTGA | 1 cut(s) | 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 215 |
| Hpy188I | TCNGA | 3 cut(s) | 178, 325, 361 |
| Hpy188III | TCNNGA | 1 cut(s) | 399 |
| Hpy8I | GTNNAC | 1 cut(s) | 215 |
| HpyAV | CCTTC | 2 cut(s) | 142, 404 |
| HpyCH4III | ACNGT | 3 cut(s) | 27, 249, 354 |
| HpyCH4V | TGCA | 3 cut(s) | 335, 344, 425 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 341 |
| HpyF3I | CTNAG | 1 cut(s) | 270 |
| Kzo9I | GATC | 3 cut(s) | 161, 237, 325 |
| LpnPI | CCDG | 3 cut(s) | 265, 412, 443 |
| MaeI | CTAG | 1 cut(s) | 107 |
| MaeIII | GTNAC | 1 cut(s) | 140 |
| MalI | GATC | 3 cut(s) | 163, 239, 327 |
| MboI | GATC | 3 cut(s) | 161, 237, 325 |
| MboII | GAAGA | 4 cut(s) | 125, 202, 310, 314 |
| MflI | RGATCY | 1 cut(s) | 237 |
| MluCI | AATT | 3 cut(s) | 45, 72, 442 |
| MnlI | CCTC | 4 cut(s) | 76, 90, 112, 304 |
| MspI | CCGG | 2 cut(s) | 252, 430 |
| MspR9I | CCNGG | 1 cut(s) | 430 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 341 |
| NciI | CCSGG | 1 cut(s) | 430 |
| NdeII | GATC | 3 cut(s) | 161, 237, 325 |
| NmuCI | GTSAC | 1 cut(s) | 140 |
| PfeI | GAWTC | 2 cut(s) | 338, 395 |
| PkrI | GCNGC | 1 cut(s) | 224 |
| PstI | CTGCAG | 1 cut(s) | 337 |
| PstNI | CAGNNNCTG | 1 cut(s) | 341 |
| PsuI | RGATCY | 1 cut(s) | 237 |
| SatI | GCNGC | 1 cut(s) | 223 |
| Sau3AI | GATC | 3 cut(s) | 161, 237, 325 |
| ScrFI | CCNGG | 1 cut(s) | 430 |
| SetI | ASST | 5 cut(s) | 94, 174, 315, 376, 393 |
| SfcI | CTRYAG | 1 cut(s) | 333 |
| SpeI | ACTAGT | 1 cut(s) | 106 |
| Sse9I | AATT | 3 cut(s) | 45, 72, 442 |
| SsiI | CCGC | 1 cut(s) | 223 |
| SspMI | CTAG | 1 cut(s) | 107 |
| StyD4I | CCNGG | 1 cut(s) | 428 |
| TaaI | ACNGT | 3 cut(s) | 27, 249, 354 |
| TasI | AATT | 3 cut(s) | 45, 72, 442 |
| TauI | GCSGC | 1 cut(s) | 225 |
| TfiI | GAWTC | 2 cut(s) | 338, 395 |
| TseFI | GTSAC | 1 cut(s) | 140 |
| Tsp45I | GTSAC | 1 cut(s) | 140 |
| XspI | CTAG | 1 cut(s) | 107 |