RLG00000032936

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0005340
Physical Location & Seq
Reverse (-)
21173094 .. 21178539
5446 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032936

Sequence Viewer

Length: 1350 bp
ATGGCGAAGAAGCCAATCCGCGGCCGGCGCTCGCCGCCTTCCGGCTCCGGCTCCGCCTCATCCTCACTCTCCCGCTCCCCTTCCGGTTCATTCTCAGGCTCTTCCTCCCGCTCCTCCTCTCGTTCCCGGTCTCGCTCCAGGTCCTCCGCCTCCTCCTCGTCCCGCAGTGGCAGCTCTCGCAGCCCTAGCCCCCGTTCCTCCAAAAGAAGTCCTGGGGCTCGACGAGGTCGATCTCCTCCACCATCTAAAAGGGCATCTCCACCTCCAAGGAAATCTTCTCCGGCTCATGAGTCACTTGTTCTTCACATTGATAAGCTTTCAAGGAATGTGAATGAAGGCCATTTAAGAGAAATTTTTGGCAACTATGGTGAAGTTGTACATGTTGAGCTGGCAATGGATCGTAGTGTTAATCTTCCAAAAGGATATGGATACGTGGAGTTCAAGATGAGAGCAGATGCTGAAAAAGCACTGTTACACATGGATGGCGGTCAAATTGATGGTAATGTAGTTCAAGCAAAATTTACATTATCTCAGCGTCAGAAGTCGCCACCTCCTAAGCCTGTTGTGACTGCTCCAAAGAGAGATACTGTGAAAACTGATGGTATCAATGCTGATAAGGATGGACCAAAGCGTTTGAGGGAAGCTTCTCCTCGTCGGAGACCACCTTCACCACGAAGGAGATCTCCAGTGGCTCGTAGAGGTGGATCTCCAAGAAGACCGCTAGATTCTCCACCACCTCGTCGTCGAGCAGGTTCTCCTTACCGACGTGGTGATACATCTCCAAGAAGGAGGCTTATTTCTCCATCCCGAGGACGTTCTGGGTCTCCGCCACCAAGGCGGCGATCCCCAGTTAGGGCTTCTCCAAGAAGGATACGTGGCAGCCCCCCTGTTCGCAGACGTGGCTCTCCTCCCCCAAGGCGCCGTTCACCTCCTCCTCGACGGGCTCGTAGTCCTCCGAGAAGGTCTCCAATCAGTCGTAGGCGTAGCCGTTCTCCTCCTATTCGTAGGCCTGCTCGGTCACGTTCAAGATCAATTTCACCACGGAGAGGTCGAGGTCCAGCGATGAGACGTGGGAGGTCATCATCATCTTCCTCTGGATCACCTGGTCCACGCAAGGTAGTCCGGAGGATACCATCTCGTAGTCCAAGAAGTGTACTTTTTTGGTTCTGGTTTATGCATCTTGCTACCATCTGTTTCTGCTTGGCATACTTTGAGCTTTTCTTGCTTGGCCTGCAAGGGGAAGAAGCAGTAGCAGCAACAGCAGCAGAAGCAGTTCACCTCTTCCTCCTCGGAAGCCATAGGCCTTTACGAGGAAGAAGCAGTAGCAGATCACCCCCTCGTAACCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

450

Amino Acids

49.52

Weight (kDa)

12.0

Isoelectric Point (pI)

137.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 103 - 170 3.4e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 740
AccB1I GGYRCC 1 cut(s) 918
AccBSI CCGCTC 2 cut(s) 75, 111
AccII CGCG 1 cut(s) 21
AccIII TCCGGA 1 cut(s) 1122
AclWI GGATC 4 cut(s) 405, 712, 837, 1105
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 2 cut(s) 351, 518
AcyI GRCGYC 1 cut(s) 919
AfaI GTAC 2 cut(s) 378, 1155
AfiI CCNNNNNNNGG 8 cut(s) 20, 41, 809, 852, 853, 1046, 1237, 1310
AflIII ACRYGT 1 cut(s) 379
AgsI TTSAA 4 cut(s) 321, 442, 512, 1026
AjiI CACGTC 3 cut(s) 767, 899, 1070
AjnI CCWGG 3 cut(s) 137, 211, 1102
AjuI GAANNNNNNNTTGG 4 cut(s) 259, 291, 907, 939
AluBI AGCT 5 cut(s) 174, 316, 388, 644, 1216
AluI AGCT 5 cut(s) 174, 316, 388, 644, 1216
Alw26I GTCTC 5 cut(s) 135, 652, 828, 969, 1060
AlwI GGATC 4 cut(s) 405, 712, 837, 1105
AlwNI CAGNNNCTG 1 cut(s) 458
Ama87I CYCGRG 1 cut(s) 807
Aor13HI TCCGGA 1 cut(s) 1122
AoxI GGCC 5 cut(s) 22, 337, 1007, 1228, 1301
ApeKI GCWGC 5 cut(s) 171, 180, 879, 1253, 1262
ApoI RAATTY 2 cut(s) 351, 518
Asp700I GAANNNNTTC 1 cut(s) 1272
AspLEI GCGC 2 cut(s) 30, 921
AspS9I GGNCC 4 cut(s) 141, 623, 1055, 1106
AsuC2I CCSGG 1 cut(s) 127
AsuHPI GGTGA 8 cut(s) 380, 660, 782, 918, 1029, 1092, 1268, 1323
AvaI CYCGRG 1 cut(s) 807
AvaII GGWCC 4 cut(s) 141, 623, 1055, 1106
BanI GGYRCC 1 cut(s) 918
BanII GRGCYC 2 cut(s) 220, 946
BbsI GAAGAC 1 cut(s) 721
BbvI GCAGC 5 cut(s) 183, 192, 891, 1265, 1274
BccI CCATC 8 cut(s) 250, 476, 491, 593, 614, 811, 1141, 1196
BceAI ACGGC 2 cut(s) 906, 972
BciT130I CCWGG 3 cut(s) 139, 213, 1104
BciVI GTATCC 3 cut(s) 422, 864, 1122
BcnI CCSGG 1 cut(s) 127
BcoDI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BfaI CTAG 2 cut(s) 186, 722
BfoI RGCGCY 2 cut(s) 31, 922
BfuAI ACCTGC 1 cut(s) 740
BfuI GTATCC 3 cut(s) 422, 864, 1122
BglI GCCNNNNNGGC 1 cut(s) 835
BglII AGATCT 1 cut(s) 680
BisI GCNGC 8 cut(s) 22, 35, 172, 181, 839, 880, 1254, 1263
BlsI GCNGC 8 cut(s) 23, 36, 173, 182, 840, 881, 1255, 1264
Bme1390I CCNGG 4 cut(s) 127, 139, 213, 1104
Bme18I GGWCC 4 cut(s) 141, 623, 1055, 1106
BmeT110I CYCGRG 1 cut(s) 807
BmgBI CACGTC 3 cut(s) 767, 899, 1070
BmgT120I GGNCC 4 cut(s) 141, 623, 1055, 1106
BmiI GGNNCC 3 cut(s) 46, 52, 920
BmrFI CCNGG 4 cut(s) 127, 139, 213, 1104
BmrI ACTGGG 1 cut(s) 842
BmsI GCATC 3 cut(s) 263, 445, 1186
BmuI ACTGGG 1 cut(s) 842
BpiI GAAGAC 1 cut(s) 721
BplI GAGNNNNNCTC 2 cut(s) 949, 981
BpmI CTGGAG 2 cut(s) 121, 669
Bpu10I CCTNAGC 1 cut(s) 555
BpuMI CCSGG 1 cut(s) 127
BsaAI YACGTR 2 cut(s) 433, 875
BsaHI GRCGYC 1 cut(s) 919
BsaI GGTCTC 4 cut(s) 135, 652, 828, 969
BsaJI CCNNGG 8 cut(s) 19, 212, 266, 808, 833, 914, 1040, 1288
BsaWI WCCGGW 2 cut(s) 83, 1122
Bsc4I CCNNNNNNNGG 8 cut(s) 20, 41, 809, 852, 853, 1046, 1237, 1310
Bse118I RCCGGY 1 cut(s) 24
Bse1I ACTGG 2 cut(s) 686, 848
Bse3DI GCAATG 1 cut(s) 399
BseAI TCCGGA 1 cut(s) 1122
BseBI CCWGG 3 cut(s) 139, 213, 1104
BseDI CCNNGG 8 cut(s) 19, 212, 266, 808, 833, 914, 1040, 1288
BseGI GGATG 4 cut(s) 59, 487, 625, 803
BseLI CCNNNNNNNGG 8 cut(s) 20, 41, 809, 852, 853, 1046, 1237, 1310
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 2 cut(s) 108, 545
BseNI ACTGG 2 cut(s) 686, 848
BseX3I CGGCCG 1 cut(s) 22
BseXI GCAGC 5 cut(s) 183, 192, 891, 1265, 1274
Bsh1236I CGCG 1 cut(s) 21
Bsh1285I CGRYCG 1 cut(s) 25
BshFI GGCC 5 cut(s) 24, 339, 1009, 1230, 1303
BshNI GGYRCC 1 cut(s) 918
BsiEI CGRYCG 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 807
BsiSI CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
BslFI GGGAC 1 cut(s) 145
BslI CCNNNNNNNGG 8 cut(s) 20, 41, 809, 852, 853, 1046, 1237, 1310
BsmAI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BsmBI CGTCTC 1 cut(s) 1060
BsmFI GGGAC 1 cut(s) 145
BsnI GGCC 5 cut(s) 24, 339, 1009, 1230, 1303
Bso31I GGTCTC 4 cut(s) 135, 652, 828, 969
BsoBI CYCGRG 1 cut(s) 807
Bsp1286I GDGCHC 2 cut(s) 220, 946
Bsp13I TCCGGA 1 cut(s) 1122
Bsp1407I TGTACA 1 cut(s) 376
Bsp143I GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
BspANI GGCC 5 cut(s) 24, 339, 1009, 1230, 1303
BspCNI CTCAG 2 cut(s) 107, 544
BspEI TCCGGA 1 cut(s) 1122
BspFNI CGCG 1 cut(s) 21
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 3 cut(s) 46, 52, 920
BspMI ACCTGC 1 cut(s) 740
BspPI GGATC 4 cut(s) 405, 712, 837, 1105
BspQI GCTCTTC 1 cut(s) 106
BspT107I GGYRCC 1 cut(s) 918
BspTNI GGTCTC 4 cut(s) 135, 652, 828, 969
BsrBI CCGCTC 2 cut(s) 75, 111
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 1 cut(s) 24
BsrGI TGTACA 1 cut(s) 376
BsrI ACTGG 2 cut(s) 686, 848
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 8 cut(s) 19, 212, 266, 808, 833, 914, 1040, 1288
BssMI GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
BssNI GRCGYC 1 cut(s) 919
BssT1I CCWWGG 3 cut(s) 266, 833, 914
Bst2UI CCWGG 3 cut(s) 139, 213, 1104
Bst4CI ACNGT 2 cut(s) 471, 589
Bst6I CTCTTC 2 cut(s) 106, 1286
BstACI GRCGYC 1 cut(s) 919
BstAUI TGTACA 1 cut(s) 376
BstBAI YACGTR 2 cut(s) 433, 875
BstC8I GCNNGC 5 cut(s) 26, 32, 390, 1011, 1232
BstDEI CTNAG 3 cut(s) 94, 531, 555
BstDSI CCRYGG 2 cut(s) 19, 1040
BstENI CCTNNNNNAGG 1 cut(s) 1308
BstF5I GGATG 4 cut(s) 59, 487, 625, 803
BstFNI CGCG 1 cut(s) 21
BstH2I RGCGCY 2 cut(s) 31, 922
BstHHI GCGC 2 cut(s) 30, 921
BstKTI GATC 8 cut(s) 233, 400, 683, 707, 845, 1031, 1100, 1331
BstMAI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BstMBI GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
BstMCI CGRYCG 1 cut(s) 25
BstNI CCWGG 3 cut(s) 139, 213, 1104
BstNSI RCATGY 1 cut(s) 383
BstSCI CCNGG 4 cut(s) 125, 137, 211, 1102
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 5 cut(s) 183, 192, 891, 1265, 1274
BstV2I GAAGAC 1 cut(s) 721
BstX2I RGATCY 2 cut(s) 680, 704
BstYI RGATCY 2 cut(s) 680, 704
BstZI CGGCCG 1 cut(s) 22
BsuI GTATCC 3 cut(s) 422, 864, 1122
BsuRI GGCC 5 cut(s) 24, 339, 1009, 1230, 1303
BtgI CCRYGG 2 cut(s) 19, 1040
BtgZI GCGATG 1 cut(s) 1076
BtrI CACGTC 3 cut(s) 767, 899, 1070
BtsCI GGATG 4 cut(s) 59, 487, 625, 803
BtsI GCAGTG 1 cut(s) 172
BtsIMutI CAGTG 3 cut(s) 172, 467, 693
BveI ACCTGC 1 cut(s) 740
Cac8I GCNNGC 5 cut(s) 26, 32, 390, 1011, 1232
CaiI CAGNNNCTG 1 cut(s) 458
CciI TCATGA 1 cut(s) 286
CfoI GCGC 2 cut(s) 30, 921
Cfr10I RCCGGY 1 cut(s) 24
Cfr13I GGNCC 4 cut(s) 141, 623, 1055, 1106
Cfr42I CCGCGG 1 cut(s) 22
CseI GACGC 1 cut(s) 524
CsiI ACCWGGT 1 cut(s) 1102
Csp6I GTAC 2 cut(s) 377, 1154
CviAII CATG 3 cut(s) 287, 380, 478
CviQI GTAC 2 cut(s) 377, 1154
DdeI CTNAG 3 cut(s) 94, 531, 555
DinI GGCGCC 1 cut(s) 920
DpnI GATC 8 cut(s) 232, 399, 682, 706, 844, 1030, 1099, 1330
DpnII GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
EaeI YGGCCR 1 cut(s) 22
EagI CGGCCG 1 cut(s) 22
Eam1104I CTCTTC 2 cut(s) 106, 1286
EarI CTCTTC 2 cut(s) 106, 1286
EciI GGCGGA 3 cut(s) 43, 136, 816
EclXI CGGCCG 1 cut(s) 22
Eco130I CCWWGG 3 cut(s) 266, 833, 914
Eco147I AGGCCT 2 cut(s) 1009, 1303
Eco24I GRGCYC 2 cut(s) 220, 946
Eco31I GGTCTC 4 cut(s) 135, 652, 828, 969
Eco47I GGWCC 4 cut(s) 141, 623, 1055, 1106
Eco52I CGGCCG 1 cut(s) 22
Eco88I CYCGRG 1 cut(s) 807
EcoNI CCTNNNNNAGG 1 cut(s) 1308
EcoO109I RGGNCCY 1 cut(s) 141
EcoRII CCWGG 3 cut(s) 137, 211, 1102
EcoT14I CCWWGG 3 cut(s) 266, 833, 914
EcoT22I ATGCAT 1 cut(s) 1179
EcoT38I GRGCYC 2 cut(s) 220, 946
EgeI GGCGCC 1 cut(s) 920
EheI GGCGCC 1 cut(s) 920
ErhI CCWWGG 3 cut(s) 266, 833, 914
Esp3I CGTCTC 1 cut(s) 1060
FaeI CATG 3 cut(s) 290, 383, 481
FaiI YATR 9 cut(s) 288, 366, 381, 426, 479, 1175, 1207, 1299, 1348
FalI AAGNNNNNCTT 2 cut(s) 259, 291
FaqI GGGAC 1 cut(s) 145
FatI CATG 3 cut(s) 286, 379, 477
FauI CCCGC 3 cut(s) 80, 116, 170
Fnu4HI GCNGC 8 cut(s) 22, 35, 172, 181, 839, 880, 1254, 1263
FokI GGATG 4 cut(s) 46, 494, 632, 790
FriOI GRGCYC 2 cut(s) 220, 946
Fsp4HI GCNGC 8 cut(s) 22, 35, 172, 181, 839, 880, 1254, 1263
FspBI CTAG 2 cut(s) 186, 722
GlaI GCGC 2 cut(s) 29, 920
GluI GCNGC 8 cut(s) 22, 35, 172, 181, 839, 880, 1254, 1263
GsuI CTGGAG 2 cut(s) 121, 669
HaeII RGCGCY 2 cut(s) 31, 922
HaeIII GGCC 5 cut(s) 24, 339, 1009, 1230, 1303
HapII CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
HgaI GACGC 1 cut(s) 524
HhaI GCGC 2 cut(s) 30, 921
Hin1I GRCGYC 1 cut(s) 919
Hin1II CATG 3 cut(s) 290, 383, 481
Hin6I GCGC 2 cut(s) 28, 919
HinP1I GCGC 2 cut(s) 28, 919
HindIII AAGCTT 2 cut(s) 314, 642
HinfI GANTC 2 cut(s) 290, 725
HpaII CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
HphI GGTGA 8 cut(s) 380, 660, 782, 918, 1029, 1092, 1268, 1323
Hpy166II GTNNAC 4 cut(s) 926, 1109, 1154, 1276
Hpy188I TCNGA 4 cut(s) 540, 657, 957, 1292
Hpy188III TCNNGA 6 cut(s) 287, 442, 807, 1026, 1095, 1123
Hpy8I GTNNAC 4 cut(s) 926, 1109, 1154, 1276
Hpy99I CGWCG 6 cut(s) 225, 657, 744, 747, 768, 942
HpyAV CCTTC 8 cut(s) 48, 90, 329, 669, 675, 780, 861, 954
HpyCH4III ACNGT 2 cut(s) 471, 589
HpyCH4IV ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
HpyCH4V TGCA 2 cut(s) 1177, 1234
HpyF3I CTNAG 3 cut(s) 94, 531, 555
HpySE526I ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
Hsp92I GRCGYC 1 cut(s) 919
Hsp92II CATG 3 cut(s) 290, 383, 481
HspAI GCGC 2 cut(s) 28, 919
KasI GGCGCC 1 cut(s) 918
Kpn2I TCCGGA 1 cut(s) 1122
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
KspI CCGCGG 1 cut(s) 22
Kzo9I GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
LguI GCTCTTC 1 cut(s) 106
LmnI GCTCC 6 cut(s) 50, 56, 80, 116, 140, 577
Lsp1109I GCAGC 5 cut(s) 183, 192, 891, 1265, 1274
LweI GCATC 3 cut(s) 263, 445, 1186
MabI ACCWGGT 1 cut(s) 1102
MaeI CTAG 2 cut(s) 186, 722
MaeII ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
MaeIII GTNAC 5 cut(s) 291, 471, 565, 1017, 1340
MalI GATC 8 cut(s) 232, 399, 682, 706, 844, 1030, 1099, 1330
MbiI CCGCTC 2 cut(s) 75, 111
MboI GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
MflI RGATCY 2 cut(s) 680, 704
MhlI GDGCHC 2 cut(s) 220, 946
MluCI AATT 4 cut(s) 351, 492, 518, 1032
Mly113I GGCGCC 1 cut(s) 919
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 1 cut(s) 635
Mph1103I ATGCAT 1 cut(s) 1179
MroI TCCGGA 1 cut(s) 1122
MroNI GCCGGC 1 cut(s) 24
MroXI GAANNNNTTC 1 cut(s) 1272
MseI TTAA 2 cut(s) 344, 408
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
MspR9I CCNGG 4 cut(s) 127, 139, 213, 1104
MvaI CCWGG 3 cut(s) 139, 213, 1104
MvnI CGCG 1 cut(s) 21
NaeI GCCGGC 1 cut(s) 26
NarI GGCGCC 1 cut(s) 919
NciI CCSGG 1 cut(s) 127
NdeII GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 3 cut(s) 290, 383, 481
NlaIV GGNNCC 3 cut(s) 46, 52, 920
NmuCI GTSAC 3 cut(s) 291, 565, 1017
NsiI ATGCAT 1 cut(s) 1179
NspI RCATGY 1 cut(s) 383
PagI TCATGA 1 cut(s) 286
PceI AGGCCT 2 cut(s) 1009, 1303
PciI ACATGT 1 cut(s) 379
PciSI GCTCTTC 1 cut(s) 106
PcsI WCGNNNNNNNCGW 3 cut(s) 226, 943, 1048
PdiI GCCGGC 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 1 cut(s) 725
PflFI GACNNNGTC 1 cut(s) 225
PkrI GCNGC 8 cut(s) 23, 36, 173, 182, 840, 881, 1255, 1264
PleI GAGTC 1 cut(s) 298
PluTI GGCGCC 1 cut(s) 922
PpsI GAGTC 1 cut(s) 298
Ppu21I YACGTR 2 cut(s) 433, 875
PpuMI RGGWCCY 1 cut(s) 141
PscI ACATGT 1 cut(s) 379
Psp5II RGGWCCY 1 cut(s) 141
Psp6I CCWGG 3 cut(s) 137, 211, 1102
PspGI CCWGG 3 cut(s) 137, 211, 1102
PspN4I GGNNCC 3 cut(s) 46, 52, 920
PspPI GGNCC 4 cut(s) 141, 623, 1055, 1106
PspPPI RGGWCCY 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 458
PsuI RGATCY 2 cut(s) 680, 704
PsyI GACNNNGTC 1 cut(s) 225
RsaI GTAC 2 cut(s) 378, 1155
RsaNI GTAC 2 cut(s) 377, 1154
RseI CAYNNNNRTG 1 cut(s) 480
SacII CCGCGG 1 cut(s) 22
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 2 cut(s) 344, 408
SatI GCNGC 8 cut(s) 22, 35, 172, 181, 839, 880, 1254, 1263
Sau3AI GATC 8 cut(s) 230, 397, 680, 704, 842, 1028, 1097, 1328
Sau96I GGNCC 4 cut(s) 141, 623, 1055, 1106
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 4 cut(s) 127, 139, 213, 1104
SduI GDGCHC 2 cut(s) 220, 946
SexAI ACCWGGT 1 cut(s) 1102
SfaNI GCATC 3 cut(s) 263, 445, 1186
SfoI GGCGCC 1 cut(s) 920
Sfr303I CCGCGG 1 cut(s) 22
SgrBI CCGCGG 1 cut(s) 22
SinI GGWCC 4 cut(s) 141, 623, 1055, 1106
SmiMI CAYNNNNRTG 1 cut(s) 480
Sse9I AATT 4 cut(s) 351, 492, 518, 1032
SseBI AGGCCT 2 cut(s) 1009, 1303
SspDI GGCGCC 1 cut(s) 918
SspMI CTAG 2 cut(s) 186, 722
StuI AGGCCT 2 cut(s) 1009, 1303
StyD4I CCNGG 4 cut(s) 125, 137, 211, 1102
StyI CCWWGG 3 cut(s) 266, 833, 914
TaaI ACNGT 2 cut(s) 471, 589
TaiI ACGT 7 cut(s) 435, 769, 817, 877, 901, 1024, 1072
TaqI TCGA 5 cut(s) 220, 229, 745, 937, 1051
TaqII GACCGA 1 cut(s) 1005
TasI AATT 4 cut(s) 351, 492, 518, 1032
TatI WGTACW 2 cut(s) 376, 1153
TauI GCSGC 3 cut(s) 24, 37, 841
TfiI GAWTC 1 cut(s) 725
Tru1I TTAA 2 cut(s) 344, 408
Tru9I TTAA 2 cut(s) 344, 408
TscAI CASTG 3 cut(s) 172, 474, 693
TseFI GTSAC 3 cut(s) 291, 565, 1017
TseI GCWGC 5 cut(s) 171, 180, 879, 1253, 1262
Tsp45I GTSAC 3 cut(s) 291, 565, 1017
TspDTI ATGAA 2 cut(s) 78, 348
TspGWI ACGGA 1 cut(s) 1057
TspRI CASTG 3 cut(s) 172, 474, 693
Tth111I GACNNNGTC 1 cut(s) 225
VpaK11BI GGWCC 4 cut(s) 141, 623, 1055, 1106
XagI CCTNNNNNAGG 1 cut(s) 1308
XapI RAATTY 2 cut(s) 351, 518
XceI RCATGY 1 cut(s) 383
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 2 cut(s) 186, 722
Zsp2I ATGCAT 1 cut(s) 1179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.