Rh5DG186100

RNA recognition motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0005340
Physical Location & Seq
Reverse (-)
20703293 .. 20709263
5971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG186100.1

Sequence Viewer

Length: 1350 bp
ATGGCGAAGAAGCCAATCCGCGGCCGGCGCTCGCCGCCTTCCGGCTCCGGCTCCGCCTCATCCTCACTCTCCCGCTCCCCTTCCGGTTCTTTCTCAGGCTCTTCCTCCCGCTCCTCTTCTCGTTCCCGGTCTCGCTCCAGGTCCTCCGCCTCCTCCTCTTCCCGCAGCGGCAGCTCTCGCAGCCCTAGCCCCCGTTCCTCCAAAAGAAGTCCTGGCGCTCGACGAGGTCGATCTCCTCCACCATCTAAAAGGGCATCTCCACCTCCAAGGAAATCTTCTCCGGCTCATGAGTCACTTGTTCTTCACATTGATAAGCTTTCAAGGAATGTGAATGAAGGCCATTTAAGAGAAATTTTTGGCAACTATGGTGAAGTTGTACATGTTGAGCTGGCAATGGATCGTAGTGTTAATCTTCCAAAAGGATATGGATACGTGGAGTTCAAGATGAGAGCAGATGCTGAAAAAGCACTATTACACATGGATGGCGGTCAAATTGATGGTAATGTAGTTCAAGCAAAATTTACATTATCTCAGCGTCAGAAGTCGCCACCTCCTAAGCCTGTTGTGACTGCTCCAAAGAGAGATACTGTGAAAACTGATGGTATCAATGCTGATAAGGATGGACCAAAGCGTTTGAGGGAAGCTTCTCCTCGTCGGAGACCACCTTCACCACGAAGGAGATCTCCAGTGGCTCGTAGAGGTGGATCTCCAAGAAGACCGCTAGATTCTCCACCACCTCGTCGTCGAGCAGGTTCTCCTTACCGACGTGGTGATACATCTCCAAGAAGGAGGCTTATTTCTCCATCCCGAGGACGTTCTGGGTCTCCGCCACCAAGGCGGCGATCCCCAGTTAGGGCTTCTCCAAGAAGGATACGTGGCAGCCCCCCTGTTCGCAGACGTGGCTCTCCTCCCCCAAGGCGCCGTTCACCTCCTCCTCGACGGGCTCGTAGTCCTCCGAGAAGGTCTCCAATCAGTCGTAGGCGTAGCCGTTCTCCTCCTATTCGTAGGCCTGCTCGGTCACGTTCAAGATCAATTTCACCACGGAGAGGTCGAGGTCCAGCGATGAGACGTGGGAGGTCATCATCATCTTCCTCTGGATCACCTGGTCCACGCAAGGTAGTCCGGAGGATACCATCTCGTAGTCCAAGAAGGTATCTTTGTTTATTTTGCTTTTGTTGGTATTTTCTTAAATTTCTGTTGACCTATTTTAGGATACATGCTGTTAATGTGGTTGTGTTGGTGCATATGTTGCCAGTGTACTTCTTTGGTTCTGGTTTATGCATCTTGCTACCATCTGTTTCTGCTTGGCATACTTTGAGCTTTTCTTGCTTGGTATTCATACTGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
RRM_1

Protein Analysis

449

Amino Acids

49.85

Weight (kDa)

12.0

Isoelectric Point (pI)

134.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 103 - 170 3.4e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 740
AccB1I GGYRCC 1 cut(s) 918
AccBSI CCGCTC 2 cut(s) 75, 111
AccII CGCG 1 cut(s) 21
AccIII TCCGGA 1 cut(s) 1122
AclWI GGATC 4 cut(s) 405, 712, 837, 1105
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 3 cut(s) 351, 518, 1190
AcyI GRCGYC 1 cut(s) 919
AfaI GTAC 2 cut(s) 378, 1259
AfiI CCNNNNNNNGG 7 cut(s) 20, 41, 809, 852, 853, 1046, 1209
AflIII ACRYGT 1 cut(s) 379
AgsI TTSAA 4 cut(s) 321, 442, 512, 1026
AjiI CACGTC 3 cut(s) 767, 899, 1070
AjnI CCWGG 3 cut(s) 137, 211, 1102
AjuI GAANNNNNNNTTGG 4 cut(s) 259, 291, 907, 939
AluBI AGCT 5 cut(s) 174, 316, 388, 644, 1320
AluI AGCT 5 cut(s) 174, 316, 388, 644, 1320
Alw26I GTCTC 5 cut(s) 135, 652, 828, 969, 1060
AlwI GGATC 4 cut(s) 405, 712, 837, 1105
AlwNI CAGNNNCTG 1 cut(s) 458
Ama87I CYCGRG 1 cut(s) 807
Aor13HI TCCGGA 1 cut(s) 1122
AoxI GGCC 3 cut(s) 22, 337, 1007
ApeKI GCWGC 4 cut(s) 165, 171, 180, 879
ApoI RAATTY 3 cut(s) 351, 518, 1190
AspLEI GCGC 3 cut(s) 30, 218, 921
AspS9I GGNCC 4 cut(s) 141, 623, 1055, 1106
AsuC2I CCSGG 1 cut(s) 127
AsuHPI GGTGA 6 cut(s) 380, 660, 782, 918, 1029, 1092
AvaI CYCGRG 1 cut(s) 807
AvaII GGWCC 4 cut(s) 141, 623, 1055, 1106
BanI GGYRCC 1 cut(s) 918
BanII GRGCYC 1 cut(s) 946
BbsI GAAGAC 1 cut(s) 721
BbvI GCAGC 4 cut(s) 177, 183, 192, 891
BccI CCATC 8 cut(s) 250, 476, 491, 593, 614, 811, 1141, 1300
BceAI ACGGC 2 cut(s) 906, 972
BciT130I CCWGG 3 cut(s) 139, 213, 1104
BciVI GTATCC 4 cut(s) 422, 864, 1122, 1206
BcnI CCSGG 1 cut(s) 127
BcoDI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BfaI CTAG 2 cut(s) 186, 722
BfoI RGCGCY 3 cut(s) 31, 219, 922
BfuAI ACCTGC 1 cut(s) 740
BfuI GTATCC 4 cut(s) 422, 864, 1122, 1206
BglI GCCNNNNNGGC 1 cut(s) 835
BglII AGATCT 1 cut(s) 680
BisI GCNGC 8 cut(s) 22, 35, 166, 169, 172, 181, 839, 880
BlsI GCNGC 8 cut(s) 23, 36, 167, 170, 173, 182, 840, 881
Bme1390I CCNGG 4 cut(s) 127, 139, 213, 1104
Bme18I GGWCC 4 cut(s) 141, 623, 1055, 1106
BmeT110I CYCGRG 1 cut(s) 807
BmgBI CACGTC 3 cut(s) 767, 899, 1070
BmgT120I GGNCC 4 cut(s) 141, 623, 1055, 1106
BmiI GGNNCC 3 cut(s) 46, 52, 920
BmrFI CCNGG 4 cut(s) 127, 139, 213, 1104
BmrI ACTGGG 1 cut(s) 842
BmsI GCATC 3 cut(s) 263, 445, 1290
BmuI ACTGGG 1 cut(s) 842
BpiI GAAGAC 1 cut(s) 721
BplI GAGNNNNNCTC 2 cut(s) 949, 981
BpmI CTGGAG 2 cut(s) 121, 669
Bpu10I CCTNAGC 1 cut(s) 555
BpuMI CCSGG 1 cut(s) 127
BsaAI YACGTR 2 cut(s) 433, 875
BsaHI GRCGYC 1 cut(s) 919
BsaI GGTCTC 4 cut(s) 135, 652, 828, 969
BsaJI CCNNGG 6 cut(s) 19, 266, 808, 833, 914, 1040
BsaWI WCCGGW 2 cut(s) 83, 1122
Bsc4I CCNNNNNNNGG 7 cut(s) 20, 41, 809, 852, 853, 1046, 1209
Bse118I RCCGGY 1 cut(s) 24
Bse1I ACTGG 4 cut(s) 686, 848, 1253, 1347
Bse3DI GCAATG 1 cut(s) 399
BseAI TCCGGA 1 cut(s) 1122
BseBI CCWGG 3 cut(s) 139, 213, 1104
BseDI CCNNGG 6 cut(s) 19, 266, 808, 833, 914, 1040
BseGI GGATG 4 cut(s) 59, 487, 625, 803
BseLI CCNNNNNNNGG 7 cut(s) 20, 41, 809, 852, 853, 1046, 1209
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 2 cut(s) 108, 545
BseNI ACTGG 4 cut(s) 686, 848, 1253, 1347
BseRI GAGGAG 9 cut(s) 103, 142, 145, 225, 639, 897, 921, 924, 984
BseX3I CGGCCG 1 cut(s) 22
BseXI GCAGC 4 cut(s) 177, 183, 192, 891
Bsh1236I CGCG 1 cut(s) 21
Bsh1285I CGRYCG 1 cut(s) 25
BshFI GGCC 3 cut(s) 24, 339, 1009
BshNI GGYRCC 1 cut(s) 918
BsiEI CGRYCG 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 807
BsiSI CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
BslI CCNNNNNNNGG 7 cut(s) 20, 41, 809, 852, 853, 1046, 1209
BsmAI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BsmBI CGTCTC 1 cut(s) 1060
BsnI GGCC 3 cut(s) 24, 339, 1009
Bso31I GGTCTC 4 cut(s) 135, 652, 828, 969
BsoBI CYCGRG 1 cut(s) 807
Bsp1286I GDGCHC 1 cut(s) 946
Bsp13I TCCGGA 1 cut(s) 1122
Bsp1407I TGTACA 1 cut(s) 376
Bsp143I GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
BspANI GGCC 3 cut(s) 24, 339, 1009
BspCNI CTCAG 2 cut(s) 107, 544
BspEI TCCGGA 1 cut(s) 1122
BspFNI CGCG 1 cut(s) 21
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 3 cut(s) 46, 52, 920
BspMI ACCTGC 1 cut(s) 740
BspPI GGATC 4 cut(s) 405, 712, 837, 1105
BspQI GCTCTTC 1 cut(s) 106
BspT107I GGYRCC 1 cut(s) 918
BspTNI GGTCTC 4 cut(s) 135, 652, 828, 969
BsrBI CCGCTC 2 cut(s) 75, 111
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 1 cut(s) 24
BsrGI TGTACA 1 cut(s) 376
BsrI ACTGG 4 cut(s) 686, 848, 1253, 1347
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 6 cut(s) 19, 266, 808, 833, 914, 1040
BssMI GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
BssNI GRCGYC 1 cut(s) 919
BssT1I CCWWGG 3 cut(s) 266, 833, 914
Bst2UI CCWGG 3 cut(s) 139, 213, 1104
Bst4CI ACNGT 1 cut(s) 589
Bst6I CTCTTC 3 cut(s) 106, 121, 163
BstACI GRCGYC 1 cut(s) 919
BstAPI GCANNNNNTGC 1 cut(s) 1249
BstAUI TGTACA 1 cut(s) 376
BstBAI YACGTR 2 cut(s) 433, 875
BstC8I GCNNGC 4 cut(s) 26, 32, 390, 1011
BstDEI CTNAG 3 cut(s) 94, 531, 555
BstDSI CCRYGG 2 cut(s) 19, 1040
BstENI CCTNNNNNAGG 1 cut(s) 1207
BstF5I GGATG 4 cut(s) 59, 487, 625, 803
BstFNI CGCG 1 cut(s) 21
BstH2I RGCGCY 3 cut(s) 31, 219, 922
BstHHI GCGC 3 cut(s) 30, 218, 921
BstKTI GATC 7 cut(s) 233, 400, 683, 707, 845, 1031, 1100
BstMAI GTCTC 5 cut(s) 135, 652, 828, 969, 1060
BstMBI GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
BstMCI CGRYCG 1 cut(s) 25
BstNI CCWGG 3 cut(s) 139, 213, 1104
BstNSI RCATGY 2 cut(s) 383, 1220
BstSCI CCNGG 4 cut(s) 125, 137, 211, 1102
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 4 cut(s) 177, 183, 192, 891
BstV2I GAAGAC 1 cut(s) 721
BstX2I RGATCY 2 cut(s) 680, 704
BstYI RGATCY 2 cut(s) 680, 704
BstZI CGGCCG 1 cut(s) 22
BsuI GTATCC 4 cut(s) 422, 864, 1122, 1206
BsuRI GGCC 3 cut(s) 24, 339, 1009
BtgI CCRYGG 2 cut(s) 19, 1040
BtgZI GCGATG 1 cut(s) 1076
BtrI CACGTC 3 cut(s) 767, 899, 1070
BtsCI GGATG 4 cut(s) 59, 487, 625, 803
BtsIMutI CAGTG 2 cut(s) 693, 1260
BveI ACCTGC 1 cut(s) 740
Cac8I GCNNGC 4 cut(s) 26, 32, 390, 1011
CaiI CAGNNNCTG 1 cut(s) 458
CciI TCATGA 1 cut(s) 286
CfoI GCGC 3 cut(s) 30, 218, 921
Cfr10I RCCGGY 1 cut(s) 24
Cfr13I GGNCC 4 cut(s) 141, 623, 1055, 1106
Cfr42I CCGCGG 1 cut(s) 22
CseI GACGC 1 cut(s) 524
CsiI ACCWGGT 1 cut(s) 1102
Csp6I GTAC 2 cut(s) 377, 1258
CviAII CATG 4 cut(s) 287, 380, 478, 1217
CviQI GTAC 2 cut(s) 377, 1258
DdeI CTNAG 3 cut(s) 94, 531, 555
DinI GGCGCC 1 cut(s) 920
DpnI GATC 7 cut(s) 232, 399, 682, 706, 844, 1030, 1099
DpnII GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
EaeI YGGCCR 1 cut(s) 22
EagI CGGCCG 1 cut(s) 22
Eam1104I CTCTTC 3 cut(s) 106, 121, 163
EarI CTCTTC 3 cut(s) 106, 121, 163
EciI GGCGGA 3 cut(s) 43, 136, 816
EclXI CGGCCG 1 cut(s) 22
Eco130I CCWWGG 3 cut(s) 266, 833, 914
Eco147I AGGCCT 1 cut(s) 1009
Eco24I GRGCYC 1 cut(s) 946
Eco31I GGTCTC 4 cut(s) 135, 652, 828, 969
Eco47I GGWCC 4 cut(s) 141, 623, 1055, 1106
Eco52I CGGCCG 1 cut(s) 22
Eco88I CYCGRG 1 cut(s) 807
EcoNI CCTNNNNNAGG 1 cut(s) 1207
EcoO109I RGGNCCY 1 cut(s) 141
EcoRII CCWGG 3 cut(s) 137, 211, 1102
EcoT14I CCWWGG 3 cut(s) 266, 833, 914
EcoT22I ATGCAT 1 cut(s) 1283
EcoT38I GRGCYC 1 cut(s) 946
EgeI GGCGCC 1 cut(s) 920
EheI GGCGCC 1 cut(s) 920
ErhI CCWWGG 3 cut(s) 266, 833, 914
Esp3I CGTCTC 1 cut(s) 1060
FaeI CATG 4 cut(s) 290, 383, 481, 1220
FalI AAGNNNNNCTT 2 cut(s) 259, 291
FatI CATG 4 cut(s) 286, 379, 477, 1216
FauI CCCGC 3 cut(s) 80, 116, 170
FauNDI CATATG 1 cut(s) 1245
Fnu4HI GCNGC 8 cut(s) 22, 35, 166, 169, 172, 181, 839, 880
FokI GGATG 4 cut(s) 46, 494, 632, 790
FriOI GRGCYC 1 cut(s) 946
Fsp4HI GCNGC 8 cut(s) 22, 35, 166, 169, 172, 181, 839, 880
FspBI CTAG 2 cut(s) 186, 722
GlaI GCGC 3 cut(s) 29, 217, 920
GluI GCNGC 8 cut(s) 22, 35, 166, 169, 172, 181, 839, 880
GsuI CTGGAG 2 cut(s) 121, 669
HaeII RGCGCY 3 cut(s) 31, 219, 922
HaeIII GGCC 3 cut(s) 24, 339, 1009
HapII CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
HgaI GACGC 1 cut(s) 524
HhaI GCGC 3 cut(s) 30, 218, 921
Hin1I GRCGYC 1 cut(s) 919
Hin1II CATG 4 cut(s) 290, 383, 481, 1220
Hin6I GCGC 3 cut(s) 28, 216, 919
HinP1I GCGC 3 cut(s) 28, 216, 919
HincII GTYRAC 1 cut(s) 1200
HindII GTYRAC 1 cut(s) 1200
HindIII AAGCTT 2 cut(s) 314, 642
HinfI GANTC 2 cut(s) 290, 725
HpaII CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
HphI GGTGA 6 cut(s) 380, 660, 782, 918, 1029, 1092
Hpy166II GTNNAC 4 cut(s) 926, 1109, 1200, 1258
Hpy188I TCNGA 3 cut(s) 540, 657, 957
Hpy188III TCNNGA 6 cut(s) 287, 442, 807, 1026, 1095, 1123
Hpy8I GTNNAC 4 cut(s) 926, 1109, 1200, 1258
Hpy99I CGWCG 6 cut(s) 225, 657, 744, 747, 768, 942
HpyAV CCTTC 9 cut(s) 48, 90, 329, 669, 675, 780, 861, 954, 1143
HpyCH4III ACNGT 1 cut(s) 589
HpyCH4IV ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
HpyCH4V TGCA 2 cut(s) 1243, 1281
HpyF3I CTNAG 3 cut(s) 94, 531, 555
HpySE526I ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
Hsp92I GRCGYC 1 cut(s) 919
Hsp92II CATG 4 cut(s) 290, 383, 481, 1220
HspAI GCGC 3 cut(s) 28, 216, 919
KasI GGCGCC 1 cut(s) 918
Kpn2I TCCGGA 1 cut(s) 1122
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
KspI CCGCGG 1 cut(s) 22
Kzo9I GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
LguI GCTCTTC 1 cut(s) 106
LmnI GCTCC 6 cut(s) 50, 56, 80, 116, 140, 577
Lsp1109I GCAGC 4 cut(s) 177, 183, 192, 891
LweI GCATC 3 cut(s) 263, 445, 1290
MabI ACCWGGT 1 cut(s) 1102
MaeI CTAG 2 cut(s) 186, 722
MaeII ACGT 7 cut(s) 432, 766, 814, 874, 898, 1021, 1069
MaeIII GTNAC 3 cut(s) 291, 565, 1017
MalI GATC 7 cut(s) 232, 399, 682, 706, 844, 1030, 1099
MbiI CCGCTC 2 cut(s) 75, 111
MboI GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
MboII GAAGA 9 cut(s) 19, 93, 108, 150, 267, 293, 404, 726, 1080
MflI RGATCY 2 cut(s) 680, 704
MhlI GDGCHC 1 cut(s) 946
MluCI AATT 5 cut(s) 351, 492, 518, 1032, 1190
Mly113I GGCGCC 1 cut(s) 919
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 1 cut(s) 635
Mph1103I ATGCAT 1 cut(s) 1283
MroI TCCGGA 1 cut(s) 1122
MroNI GCCGGC 1 cut(s) 24
MseI TTAA 4 cut(s) 344, 408, 1188, 1224
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 2 cut(s) 21, 168
MspI CCGG 7 cut(s) 25, 42, 48, 84, 127, 281, 1123
MspR9I CCNGG 4 cut(s) 127, 139, 213, 1104
MvaI CCWGG 3 cut(s) 139, 213, 1104
MvnI CGCG 1 cut(s) 21
NaeI GCCGGC 1 cut(s) 26
NarI GGCGCC 1 cut(s) 919
NciI CCSGG 1 cut(s) 127
NdeI CATATG 1 cut(s) 1245
NdeII GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 4 cut(s) 290, 383, 481, 1220
NlaIV GGNNCC 3 cut(s) 46, 52, 920
NmuCI GTSAC 3 cut(s) 291, 565, 1017
NsiI ATGCAT 1 cut(s) 1283
NspI RCATGY 2 cut(s) 383, 1220
PagI TCATGA 1 cut(s) 286
PceI AGGCCT 1 cut(s) 1009
PciI ACATGT 1 cut(s) 379
PciSI GCTCTTC 1 cut(s) 106
PcsI WCGNNNNNNNCGW 3 cut(s) 226, 943, 1048
PdiI GCCGGC 1 cut(s) 26
PfeI GAWTC 1 cut(s) 725
PflFI GACNNNGTC 1 cut(s) 225
PkrI GCNGC 8 cut(s) 23, 36, 167, 170, 173, 182, 840, 881
PleI GAGTC 1 cut(s) 298
PluTI GGCGCC 1 cut(s) 922
PpsI GAGTC 1 cut(s) 298
Ppu21I YACGTR 2 cut(s) 433, 875
PpuMI RGGWCCY 1 cut(s) 141
PscI ACATGT 1 cut(s) 379
Psp5II RGGWCCY 1 cut(s) 141
Psp6I CCWGG 3 cut(s) 137, 211, 1102
PspGI CCWGG 3 cut(s) 137, 211, 1102
PspN4I GGNNCC 3 cut(s) 46, 52, 920
PspPI GGNCC 4 cut(s) 141, 623, 1055, 1106
PspPPI RGGWCCY 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 458
PsuI RGATCY 2 cut(s) 680, 704
PsyI GACNNNGTC 1 cut(s) 225
RsaI GTAC 2 cut(s) 378, 1259
RsaNI GTAC 2 cut(s) 377, 1258
RseI CAYNNNNRTG 1 cut(s) 480
SacII CCGCGG 1 cut(s) 22
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 4 cut(s) 344, 408, 1188, 1224
SatI GCNGC 8 cut(s) 22, 35, 166, 169, 172, 181, 839, 880
Sau3AI GATC 7 cut(s) 230, 397, 680, 704, 842, 1028, 1097
Sau96I GGNCC 4 cut(s) 141, 623, 1055, 1106
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 4 cut(s) 127, 139, 213, 1104
SduI GDGCHC 1 cut(s) 946
SexAI ACCWGGT 1 cut(s) 1102
SfaNI GCATC 3 cut(s) 263, 445, 1290
SfoI GGCGCC 1 cut(s) 920
Sfr303I CCGCGG 1 cut(s) 22
SgrBI CCGCGG 1 cut(s) 22
SinI GGWCC 4 cut(s) 141, 623, 1055, 1106
SmiMI CAYNNNNRTG 1 cut(s) 480
Sse9I AATT 5 cut(s) 351, 492, 518, 1032, 1190
SseBI AGGCCT 1 cut(s) 1009
SspDI GGCGCC 1 cut(s) 918
SspMI CTAG 2 cut(s) 186, 722
StuI AGGCCT 1 cut(s) 1009
StyD4I CCNGG 4 cut(s) 125, 137, 211, 1102
StyI CCWWGG 3 cut(s) 266, 833, 914
TaaI ACNGT 1 cut(s) 589
TaiI ACGT 7 cut(s) 435, 769, 817, 877, 901, 1024, 1072
TaqI TCGA 5 cut(s) 220, 229, 745, 937, 1051
TaqII GACCGA 1 cut(s) 1005
TasI AATT 5 cut(s) 351, 492, 518, 1032, 1190
TatI WGTACW 2 cut(s) 376, 1257
TauI GCSGC 4 cut(s) 24, 37, 171, 841
TfiI GAWTC 1 cut(s) 725
Tru1I TTAA 4 cut(s) 344, 408, 1188, 1224
Tru9I TTAA 4 cut(s) 344, 408, 1188, 1224
TscAI CASTG 2 cut(s) 693, 1260
TseFI GTSAC 3 cut(s) 291, 565, 1017
TseI GCWGC 4 cut(s) 165, 171, 180, 879
Tsp45I GTSAC 3 cut(s) 291, 565, 1017
TspDTI ATGAA 2 cut(s) 348, 1327
TspGWI ACGGA 1 cut(s) 1057
TspRI CASTG 2 cut(s) 693, 1260
Tth111I GACNNNGTC 1 cut(s) 225
VpaK11BI GGWCC 4 cut(s) 141, 623, 1055, 1106
XagI CCTNNNNNAGG 1 cut(s) 1207
XapI RAATTY 3 cut(s) 351, 518, 1190
XceI RCATGY 2 cut(s) 383, 1220
XspI CTAG 2 cut(s) 186, 722
Zsp2I ATGCAT 1 cut(s) 1283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.