RLG00000034475

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
43398248 .. 43401265
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034475

Sequence Viewer

Length: 327 bp
ATGTCAAGACCAGTGTTGCTTGTTTTTCTGCTTGTTGTTCTCATAATCACTTCGCAGTTTGAGTGGAAGCAACAACTTATCCCTGACCTTGATGCAACTCCAAGTATTTCCCAAAAGCCAAGTCAGAGCTCAAAGAGGGAAGAAGCTGTAAAAGAGAAGATCATATTATTGCAAGAAAAGAACATTAAGAGACTCAATGAGATTGTCCATAGCCTTAGGGAACAGTTGCGACGGTGTAAAAGCAAGAATGAGACGAAGCAGCAGAGCGTAAGTTTCCTATCTGAACATGTTACAGAAATTGAACAACATCAGATATTCGAGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

109

Amino Acids

12.68

Weight (kDa)

7.9

Isoelectric Point (pI)

83.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 286
AgsI TTSAA 1 cut(s) 302
AluBI AGCT 2 cut(s) 129, 146
AluI AGCT 2 cut(s) 129, 146
Alw21I GWGCWC 1 cut(s) 131
Alw26I GTCTC 2 cut(s) 184, 245
ApeKI GCWGC 1 cut(s) 259
ArsI GACNNNNNNTTYG 2 cut(s) 106, 138
AxyI CCTNAGG 1 cut(s) 215
BanII GRGCYC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 131
BbvI GCAGC 1 cut(s) 271
BcoDI GTCTC 2 cut(s) 184, 245
BfaI CTAG 1 cut(s) 325
BisI GCNGC 1 cut(s) 260
BlsI GCNGC 1 cut(s) 261
BmsI GCATC 1 cut(s) 82
Bse1I ACTGG 1 cut(s) 11
Bse21I CCTNAGG 1 cut(s) 215
BseNI ACTGG 1 cut(s) 11
BseXI GCAGC 1 cut(s) 271
BsiHKAI GWGCWC 1 cut(s) 131
BsmAI GTCTC 2 cut(s) 184, 245
BsmBI CGTCTC 1 cut(s) 245
Bsp1286I GDGCHC 1 cut(s) 131
Bsp143I GATC 1 cut(s) 159
BsrI ACTGG 1 cut(s) 11
BssMI GATC 1 cut(s) 159
Bst4CI ACNGT 2 cut(s) 225, 234
BstDEI CTNAG 1 cut(s) 215
BstKTI GATC 1 cut(s) 162
BstMAI GTCTC 2 cut(s) 184, 245
BstMBI GATC 1 cut(s) 159
BstNSI RCATGY 1 cut(s) 290
BstV1I GCAGC 1 cut(s) 271
Bsu36I CCTNAGG 1 cut(s) 215
BtsIMutI CAGTG 1 cut(s) 18
CviAII CATG 1 cut(s) 287
CviJI RGCY 4 cut(s) 118, 129, 146, 213
CviKI_1 RGCY 4 cut(s) 118, 129, 146, 213
DdeI CTNAG 1 cut(s) 215
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
Ecl136II GAGCTC 1 cut(s) 129
Eco24I GRGCYC 1 cut(s) 131
Eco53kI GAGCTC 1 cut(s) 129
Eco81I CCTNAGG 1 cut(s) 215
EcoICRI GAGCTC 1 cut(s) 129
EcoT38I GRGCYC 1 cut(s) 131
Esp3I CGTCTC 1 cut(s) 245
FaeI CATG 1 cut(s) 290
FaiI YATR 4 cut(s) 44, 164, 210, 288
FatI CATG 1 cut(s) 286
Fnu4HI GCNGC 1 cut(s) 260
FriOI GRGCYC 1 cut(s) 131
Fsp4HI GCNGC 1 cut(s) 260
FspBI CTAG 1 cut(s) 325
GluI GCNGC 1 cut(s) 260
Hin1II CATG 1 cut(s) 290
HinfI GANTC 1 cut(s) 192
Hpy188I TCNGA 3 cut(s) 126, 283, 312
Hpy188III TCNNGA 1 cut(s) 6
Hpy99I CGWCG 1 cut(s) 234
HpyCH4III ACNGT 2 cut(s) 225, 234
HpyCH4V TGCA 2 cut(s) 95, 172
HpyF3I CTNAG 1 cut(s) 215
Hsp92II CATG 1 cut(s) 290
Kzo9I GATC 1 cut(s) 159
LpnPI CCDG 2 cut(s) 24, 96
Lsp1109I GCAGC 1 cut(s) 271
LweI GCATC 1 cut(s) 82
MaeI CTAG 1 cut(s) 325
MaeIII GTNAC 1 cut(s) 289
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 2 cut(s) 152, 169
MhlI GDGCHC 1 cut(s) 131
MluCI AATT 1 cut(s) 297
MlyI GAGTC 1 cut(s) 186
MnlI CCTC 2 cut(s) 129, 313
MseI TTAA 1 cut(s) 186
NdeII GATC 1 cut(s) 159
NlaIII CATG 1 cut(s) 290
NspI RCATGY 1 cut(s) 290
PciI ACATGT 1 cut(s) 286
PkrI GCNGC 1 cut(s) 261
PleI GAGTC 1 cut(s) 186
PpsI GAGTC 1 cut(s) 186
PscI ACATGT 1 cut(s) 286
Psp124BI GAGCTC 1 cut(s) 131
SacI GAGCTC 1 cut(s) 131
SaqAI TTAA 1 cut(s) 186
SatI GCNGC 1 cut(s) 260
Sau3AI GATC 1 cut(s) 159
SchI GAGTC 1 cut(s) 186
SduI GDGCHC 1 cut(s) 131
SetI ASST 3 cut(s) 90, 131, 148
SfaNI GCATC 1 cut(s) 82
Sse9I AATT 1 cut(s) 297
SspMI CTAG 1 cut(s) 325
SstI GAGCTC 1 cut(s) 131
TaaI ACNGT 2 cut(s) 225, 234
TaqI TCGA 1 cut(s) 318
TasI AATT 1 cut(s) 297
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
TscAI CASTG 1 cut(s) 18
TseI GCWGC 1 cut(s) 259
TspRI CASTG 1 cut(s) 18
XceI RCATGY 1 cut(s) 290
XspI CTAG 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.