Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005078

Physical Location & Seq

Genomic Coordinates Reverse (-)

66562795 .. 66565143

Gene Structure 2349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035410

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGCTTCCACGCTCGCCGCCTCCTCTCTCTCCACAAAGCTCCAGAAGCCATCTCTCCTCGAATCCTCCTTCCACGGCGTTCAGGTGGCTCGTCAGCCTTTGAAGGTGGTCTCATCCAACGGCCACGGCCTCTCCGTGTCCATGTCCGCTGGTGGCTCCACCAGCGCTTACGATTTGAGCAACTTCAAGTTCGAGCCGATCAAGGAGTCCATCGTCTCCCGGGAGATGACCAGGCGATACATGACTGACATGATCACCTACGCCGATACCGACGTTGTCATCGTCGGTGCCGGTTCCGCAGGGCTATCTTGCGCATGGGAGCTCAGCAAGAACCCCGATGTGCAGGTAGCCATTATTGAGCAGTCCGTCAGCCCCGGCGGCGGCGCGTGGCTCGGTGGCCAGCTCTTCTCGGCCATGGTAGTGAGGAAACCAGCACATCACTTCCTCAACGAGTTGGGCATTGACTACGACGAGAAAGATGACTACGTAGTCATTAAGCATGCTGCCCTATTCACCTCAACTATCATGAGCAAGCTCCTTGCCCGTCCCAATGTCAAACTCTTCAACGCCGTAGCAGCTGAGGATTTGATCATCAAAGGTGGAAGAGTTGCTGGTGTTGTCACCAACTGGGCCTTGGTCTCCATGAACCACGACACACAGTCGTGCATGGACCCCAACGTTATGGAGTCCAAGGTTGTGGTAAGCTCATGCGGTCACGATGGGCCAATGGGAGCCACTGGAGTAAAGAGGTTGAGGAGTGTTGGGATGATTGAGAGCGTGCCTGGGATGAAGGCCTTGGACATGAATGCAGCTGAGGATGCCATTGTGAAGCTAACAAGGGAAATCGTGCCTGGAATGATCGTTACTGGCATGGAAGTTGCTGAGATTGATGGCTCTCCAAGAATGGGACCTACATTCGGGGCTATGATGATATCAGGGCAAAAGGCAGCCCATTTGGCATTGAAGGCACTGGGACTTCCCAACGCTCTTGATGGATCATATGTTGGAGGTATCCAGCCAGAGCTGATCTTAGCTGCTGCAGATTCTGCTGCTGAGATTGCTGATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008270 GO:0009058 GO:0009110 GO:0009228 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0009987 GO:0010319 GO:0017144 GO:0018130 GO:0018131 GO:0019438 GO:0019904 GO:0031967 GO:0031975 GO:0033554 GO:0034641 GO:0042364 GO:0042723 GO:0042724 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046484 GO:0046872 GO:0046914 GO:0046983 GO:0050896 GO:0051716 GO:0052837 GO:0052838 GO:0071704 GO:0072527 GO:0072528 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

Thi4

Protein Analysis

357

Amino Acids

37.38

Weight (kDa)

5.63

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Thi4	PF01946	73 - 306	3.8e-113	Thi4 family
DAO	PF01266	91 - 137	3.7e-08	FAD dependent oxidoreductase
FAD_binding_2	PF00890	91 - 127	6.6e-06	FAD binding domain
NAD_binding_8	PF13450	94 - 129	3.6e-07	NAD(P)-binding Rossmann-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54770
fragaria_vesca	FvH4_3g21940 FvH4_3g33490
malus_domestica	MD03G1210100.v1.1 MD11G1224800.v1.1
prunus_persica	Prupe.4G205100_v2.0.a1
pyrus_communis	pycom03g15900
rosa_chinensis	RchiOBHm_Chr5g0037761 RchiOBHm_Chr5g0060861 RchiOBHm_Chr5g0060911
rosa_laevigata	RLG00000033809 RLG00000035410
rosa_multiflora	Rmu_sc0000420.1_g000030 Rmu_sc0005416.1_g000004 Rmu_sc0006558.1_g000042 Rmu_sc0026922.1_g000001
rosa_roxburghii	Rroxscaffold_1G00019770 Rroxscaffold_1G00043140
rosa_rugosa	Rorug05G0167100 Rorug05G0334800
rosa_samantha	Rh5AG256400 Rh5AG397800 Rh5BG258700 Rh5BG410200 Rh5CG291800 Rh5CG435200 Rh5DG268400 Rh5DG425000
rosa_wichuraiana	Rw5G023770 Rw5G037510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	488
Acc16I	TGCGCA	1 cut(s)	313
Acc36I	ACCTGC	1 cut(s)	334
AccB1I	GGYRCC	1 cut(s)	287
AccII	CGCG	1 cut(s)	386
AciI	CCGC	6 cut(s)	18, 147, 297, 378, 381, 711
AclI	AACGTT	1 cut(s)	678
AclWI	GGATC	1 cut(s)	1003
AcoI	YGGCCR	3 cut(s)	121, 397, 411
AfeI	AGCGCT	1 cut(s)	166
AfiI	CCNNNNNNNGG	3 cut(s)	380, 905, 917
AgsI	TTSAA	4 cut(s)	103, 187, 565, 964
AhdI	GACNNNNNGTC	1 cut(s)	658
AjnI	CCWGG	3 cut(s)	230, 781, 850
AleI	CACNNNNGTG	1 cut(s)	661
Alw21I	GWGCWC	1 cut(s)	324
Alw26I	GTCTC	3 cut(s)	115, 220, 643
AlwI	GGATC	1 cut(s)	1003
AlwNI	CAGNNNCTG	1 cut(s)	1046
Ama87I	CYCGRG	1 cut(s)	219
Aor51HI	AGCGCT	1 cut(s)	166
AoxI	GGCC	7 cut(s)	121, 127, 397, 411, 630, 722, 792
ApeKI	GCWGC	7 cut(s)	503, 575, 809, 947, 1034, 1037, 1049
AspLEI	GCGC	3 cut(s)	167, 314, 386
AspS9I	GGNCC	4 cut(s)	630, 670, 722, 908
AsuC2I	CCSGG	3 cut(s)	220, 221, 375
AsuHPI	GGTGA	3 cut(s)	247, 505, 613
AvaI	CYCGRG	1 cut(s)	219
AvaII	GGWCC	2 cut(s)	670, 908
BaeI	ACNNNNGTAYC	2 cut(s)	258, 291
BalI	TGGCCA	1 cut(s)	399
BanI	GGYRCC	1 cut(s)	287
BanII	GRGCYC	1 cut(s)	324
Bbv12I	GWGCWC	1 cut(s)	324
BbvCI	CCTCAGC	2 cut(s)	579, 813
BbvI	GCAGC	7 cut(s)	490, 587, 821, 959, 1021, 1024, 1036
BccI	CCATC	5 cut(s)	58, 218, 713, 884, 986
BceAI	ACGGC	4 cut(s)	91, 136, 142, 554
BciT130I	CCWGG	3 cut(s)	232, 783, 852
BciVI	GTATCC	1 cut(s)	1022
BclI	TGATCA	2 cut(s)	252, 588
BcnI	CCSGG	3 cut(s)	220, 221, 375
BcoDI	GTCTC	3 cut(s)	115, 220, 643
BfmI	CTRYAG	1 cut(s)	1038
BfoI	RGCGCY	1 cut(s)	168
BfuAI	ACCTGC	1 cut(s)	334
BfuI	GTATCC	1 cut(s)	1022
BglI	GCCNNNNNGGC	2 cut(s)	378, 956
BlpI	GCTNAGC	1 cut(s)	323
Bme1390I	CCNGG	6 cut(s)	220, 221, 232, 375, 783, 852
Bme18I	GGWCC	2 cut(s)	670, 908
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	1 cut(s)	219
BmgT120I	GGNCC	4 cut(s)	630, 670, 722, 908
BmiI	GGNNCC	6 cut(s)	157, 289, 295, 672, 733, 909
BmrFI	CCNGG	6 cut(s)	220, 221, 232, 375, 783, 852
BmrI	ACTGGG	2 cut(s)	637, 980
BmsI	GCATC	2 cut(s)	808, 1054
BmuI	ACTGGG	2 cut(s)	637, 980
BpmI	CTGGAG	2 cut(s)	26, 759
Bpu10I	CCTNAGC	2 cut(s)	579, 813
Bpu1102I	GCTNAGC	1 cut(s)	323
BpuMI	CCSGG	3 cut(s)	220, 221, 375
BsaAI	YACGTR	1 cut(s)	487
BsaI	GGTCTC	2 cut(s)	115, 643
BsaJI	CCNNGG	9 cut(s)	73, 124, 219, 373, 414, 633, 690, 782, 795
BsaXI	ACNNNNNCTCC	2 cut(s)	116, 146
Bsc4I	CCNNNNNNNGG	3 cut(s)	380, 905, 917
Bse118I	RCCGGY	1 cut(s)	290
Bse1I	ACTGG	4 cut(s)	632, 742, 871, 975
BseBI	CCWGG	3 cut(s)	232, 783, 852
BseDI	CCNNGG	9 cut(s)	73, 124, 219, 373, 414, 633, 690, 782, 795
BseGI	GGATG	4 cut(s)	113, 771, 792, 823
BseLI	CCNNNNNNNGG	3 cut(s)	380, 905, 917
BseMII	CTCAG	5 cut(s)	337, 570, 804, 873, 1044
BseNI	ACTGG	4 cut(s)	632, 742, 871, 975
BseRI	GAGGAG	3 cut(s)	13, 47, 769
BseXI	GCAGC	7 cut(s)	490, 587, 821, 959, 1021, 1024, 1036
BsgI	GTGCAG	1 cut(s)	362
Bsh1236I	CGCG	1 cut(s)	386
BshFI	GGCC	7 cut(s)	123, 129, 399, 413, 632, 724, 794
BshNI	GGYRCC	1 cut(s)	287
BsiHKAI	GWGCWC	1 cut(s)	324
BsiHKCI	CYCGRG	1 cut(s)	219
BsiSI	CCGG	3 cut(s)	220, 291, 375
BslFI	GGGAC	3 cut(s)	531, 921, 987
BslI	CCNNNNNNNGG	3 cut(s)	380, 905, 917
BsmAI	GTCTC	3 cut(s)	115, 220, 643
BsmBI	CGTCTC	1 cut(s)	220
BsmFI	GGGAC	3 cut(s)	531, 921, 987
BsmI	GAATGC	1 cut(s)	811
BsnI	GGCC	7 cut(s)	123, 129, 399, 413, 632, 724, 794
Bso31I	GGTCTC	2 cut(s)	115, 643
BsoBI	CYCGRG	1 cut(s)	219
Bsp1286I	GDGCHC	1 cut(s)	324
Bsp143I	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
Bsp1720I	GCTNAGC	1 cut(s)	323
Bsp19I	CCATGG	1 cut(s)	414
BspACI	CCGC	6 cut(s)	18, 147, 297, 378, 381, 711
BspANI	GGCC	7 cut(s)	123, 129, 399, 413, 632, 724, 794
BspCNI	CTCAG	5 cut(s)	336, 571, 805, 874, 1045
BspFNI	CGCG	1 cut(s)	386
BspHI	TCATGA	1 cut(s)	525
BspLI	GGNNCC	6 cut(s)	157, 289, 295, 672, 733, 909
BspMAI	CTGCAG	1 cut(s)	1042
BspMI	ACCTGC	1 cut(s)	334
BspPI	GGATC	1 cut(s)	1003
BspQI	GCTCTTC	1 cut(s)	410
BspT107I	GGYRCC	1 cut(s)	287
BspTNI	GGTCTC	2 cut(s)	115, 643
BsrFI	RCCGGY	1 cut(s)	290
BsrI	ACTGG	4 cut(s)	632, 742, 871, 975
BssAI	RCCGGY	1 cut(s)	290
BssECI	CCNNGG	9 cut(s)	73, 124, 219, 373, 414, 633, 690, 782, 795
BssMI	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
BssT1I	CCWWGG	4 cut(s)	414, 633, 690, 795
Bst2UI	CCWGG	3 cut(s)	232, 783, 852
Bst4CI	ACNGT	1 cut(s)	660
Bst6I	CTCTTC	3 cut(s)	410, 566, 598
BstAPI	GCANNNNNTGC	1 cut(s)	1046
BstBAI	YACGTR	1 cut(s)	487
BstC8I	GCNNGC	5 cut(s)	15, 401, 501, 533, 779
BstDEI	CTNAG	6 cut(s)	323, 579, 813, 882, 1030, 1053
BstDSI	CCRYGG	3 cut(s)	73, 124, 414
BstF5I	GGATG	4 cut(s)	113, 771, 792, 823
BstFNI	CGCG	1 cut(s)	386
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	3 cut(s)	167, 314, 386
BstKTI	GATC	6 cut(s)	201, 255, 591, 861, 998, 1029
BstMAI	GTCTC	3 cut(s)	115, 220, 643
BstMBI	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
BstNI	CCWGG	3 cut(s)	232, 783, 852
BstNSI	RCATGY	1 cut(s)	503
BstSCI	CCNGG	6 cut(s)	218, 219, 230, 373, 781, 850
BstSFI	CTRYAG	1 cut(s)	1038
BstSNI	TACGTA	1 cut(s)	487
BstUI	CGCG	1 cut(s)	386
BstV1I	GCAGC	7 cut(s)	490, 587, 821, 959, 1021, 1024, 1036
BstXI	CCANNNNNNTGG	2 cut(s)	682, 697
BsuI	GTATCC	1 cut(s)	1022
BsuRI	GGCC	7 cut(s)	123, 129, 399, 413, 632, 724, 794
BtgI	CCRYGG	3 cut(s)	73, 124, 414
BtsCI	GGATG	4 cut(s)	113, 771, 792, 823
BtsIMutI	CAGTG	2 cut(s)	735, 968
BveI	ACCTGC	1 cut(s)	334
Cac8I	GCNNGC	5 cut(s)	15, 401, 501, 533, 779
CaiI	CAGNNNCTG	1 cut(s)	1046
CciI	TCATGA	1 cut(s)	525
CfoI	GCGC	3 cut(s)	167, 314, 386
Cfr10I	RCCGGY	1 cut(s)	290
Cfr13I	GGNCC	4 cut(s)	630, 670, 722, 908
Cfr9I	CCCGGG	1 cut(s)	219
DdeI	CTNAG	6 cut(s)	323, 579, 813, 882, 1030, 1053
DpnI	GATC	6 cut(s)	200, 254, 590, 860, 997, 1028
DpnII	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
DrdI	GACNNNNNNGTC	1 cut(s)	488
DriI	GACNNNNNGTC	1 cut(s)	658
DseDI	GACNNNNNNGTC	1 cut(s)	488
EaeI	YGGCCR	3 cut(s)	121, 397, 411
Eam1104I	CTCTTC	3 cut(s)	410, 566, 598
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	3 cut(s)	410, 566, 598
Ecl136II	GAGCTC	1 cut(s)	322
Eco105I	TACGTA	1 cut(s)	487
Eco130I	CCWWGG	4 cut(s)	414, 633, 690, 795
Eco147I	AGGCCT	1 cut(s)	794
Eco24I	GRGCYC	1 cut(s)	324
Eco31I	GGTCTC	2 cut(s)	115, 643
Eco32I	GATATC	1 cut(s)	933
Eco47I	GGWCC	2 cut(s)	670, 908
Eco47III	AGCGCT	1 cut(s)	166
Eco53kI	GAGCTC	1 cut(s)	322
Eco88I	CYCGRG	1 cut(s)	219
EcoICRI	GAGCTC	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	908
EcoRII	CCWGG	3 cut(s)	230, 781, 850
EcoRV	GATATC	1 cut(s)	933
EcoT14I	CCWWGG	4 cut(s)	414, 633, 690, 795
EcoT38I	GRGCYC	1 cut(s)	324
ErhI	CCWWGG	4 cut(s)	414, 633, 690, 795
Esp3I	CGTCTC	1 cut(s)	220
FaqI	GGGAC	3 cut(s)	531, 921, 987
FauNDI	CATATG	1 cut(s)	1000
FbaI	TGATCA	2 cut(s)	252, 588
FokI	GGATG	4 cut(s)	100, 778, 799, 830
FriOI	GRGCYC	1 cut(s)	324
FspI	TGCGCA	1 cut(s)	313
GlaI	GCGC	3 cut(s)	166, 313, 385
GsuI	CTGGAG	2 cut(s)	26, 759
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	7 cut(s)	123, 129, 399, 413, 632, 724, 794
HapII	CCGG	3 cut(s)	220, 291, 375
HhaI	GCGC	3 cut(s)	167, 314, 386
Hin6I	GCGC	3 cut(s)	165, 312, 384
HinP1I	GCGC	3 cut(s)	165, 312, 384
HinfI	GANTC	4 cut(s)	62, 206, 686, 1043
HpaII	CCGG	3 cut(s)	220, 291, 375
HphI	GGTGA	3 cut(s)	247, 505, 613
Hpy188III	TCNNGA	4 cut(s)	43, 526, 716, 989
Hpy99I	CGWCG	3 cut(s)	275, 287, 473
HpyAV	CCTTC	4 cut(s)	79, 97, 784, 958
HpyCH4III	ACNGT	1 cut(s)	660
HpyCH4IV	ACGT	3 cut(s)	273, 486, 678
HpyCH4V	TGCA	4 cut(s)	343, 666, 809, 1040
HpyF3I	CTNAG	6 cut(s)	323, 579, 813, 882, 1030, 1053
HpySE526I	ACGT	3 cut(s)	273, 486, 678
HspAI	GCGC	3 cut(s)	165, 312, 384
Ksp22I	TGATCA	2 cut(s)	252, 588
Kzo9I	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
LguI	GCTCTTC	1 cut(s)	410
LmnI	GCTCC	5 cut(s)	45, 161, 319, 540, 731
Lsp1109I	GCAGC	7 cut(s)	490, 587, 821, 959, 1021, 1024, 1036
LweI	GCATC	2 cut(s)	808, 1054
MaeII	ACGT	3 cut(s)	273, 486, 678
MaeIII	GTNAC	3 cut(s)	619, 713, 862
MalI	GATC	6 cut(s)	200, 254, 590, 860, 997, 1028
MboI	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
MboII	GAAGA	3 cut(s)	397, 553, 615
MhlI	GDGCHC	1 cut(s)	324
MlsI	TGGCCA	1 cut(s)	399
MluNI	TGGCCA	1 cut(s)	399
MlyI	GAGTC	2 cut(s)	215, 695
MmeI	TCCRAC	2 cut(s)	141, 985
Mox20I	TGGCCA	1 cut(s)	399
MscI	TGGCCA	1 cut(s)	399
MseI	TTAA	1 cut(s)	495
MslI	CAYNNNNRTG	2 cut(s)	419, 661
Msp20I	TGGCCA	1 cut(s)	399
MspA1I	CMGCKG	3 cut(s)	149, 578, 812
MspI	CCGG	3 cut(s)	220, 291, 375
MspR9I	CCNGG	6 cut(s)	220, 221, 232, 375, 783, 852
Mva1269I	GAATGC	1 cut(s)	811
MvaI	CCWGG	3 cut(s)	232, 783, 852
MvnI	CGCG	1 cut(s)	386
NciI	CCSGG	3 cut(s)	220, 221, 375
NcoI	CCATGG	1 cut(s)	414
NdeI	CATATG	1 cut(s)	1000
NdeII	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
NlaIV	GGNNCC	6 cut(s)	157, 289, 295, 672, 733, 909
NmeAIII	GCCGAG	1 cut(s)	389
NmuCI	GTSAC	2 cut(s)	619, 713
NsbI	TGCGCA	1 cut(s)	313
NspI	RCATGY	1 cut(s)	503
OliI	CACNNNNGTG	1 cut(s)	661
PaeI	GCATGC	1 cut(s)	503
PagI	TCATGA	1 cut(s)	525
PceI	AGGCCT	1 cut(s)	794
PciSI	GCTCTTC	1 cut(s)	410
PcsI	WCGNNNNNNNCGW	3 cut(s)	132, 267, 279
PctI	GAATGC	1 cut(s)	811
PfeI	GAWTC	2 cut(s)	62, 1043
PflFI	GACNNNGTC	1 cut(s)	275
PleI	GAGTC	2 cut(s)	214, 694
PpsI	GAGTC	2 cut(s)	214, 694
Ppu21I	YACGTR	1 cut(s)	487
PpuMI	RGGWCCY	1 cut(s)	908
Psp124BI	GAGCTC	1 cut(s)	324
Psp1406I	AACGTT	1 cut(s)	678
Psp5II	RGGWCCY	1 cut(s)	908
Psp6I	CCWGG	3 cut(s)	230, 781, 850
PspGI	CCWGG	3 cut(s)	230, 781, 850
PspN4I	GGNNCC	6 cut(s)	157, 289, 295, 672, 733, 909
PspPI	GGNCC	4 cut(s)	630, 670, 722, 908
PspPPI	RGGWCCY	1 cut(s)	908
PstI	CTGCAG	1 cut(s)	1042
PstNI	CAGNNNCTG	1 cut(s)	1046
PsyI	GACNNNGTC	1 cut(s)	275
PvuII	CAGCTG	2 cut(s)	578, 812
RseI	CAYNNNNRTG	2 cut(s)	419, 661
SacI	GAGCTC	1 cut(s)	324
SapI	GCTCTTC	1 cut(s)	410
SaqAI	TTAA	1 cut(s)	495
Sau3AI	GATC	6 cut(s)	198, 252, 588, 858, 995, 1026
Sau96I	GGNCC	4 cut(s)	630, 670, 722, 908
SchI	GAGTC	2 cut(s)	215, 695
ScrFI	CCNGG	6 cut(s)	220, 221, 232, 375, 783, 852
SduI	GDGCHC	1 cut(s)	324
SfaNI	GCATC	2 cut(s)	808, 1054
SfcI	CTRYAG	1 cut(s)	1038
SinI	GGWCC	2 cut(s)	670, 908
SmaI	CCCGGG	1 cut(s)	221
SmiMI	CAYNNNNRTG	2 cut(s)	419, 661
SnaBI	TACGTA	1 cut(s)	487
SphI	GCATGC	1 cut(s)	503
SseBI	AGGCCT	1 cut(s)	794
SsiI	CCGC	6 cut(s)	18, 147, 297, 378, 381, 711
SstI	GAGCTC	1 cut(s)	324
StuI	AGGCCT	1 cut(s)	794
StyD4I	CCNGG	6 cut(s)	218, 219, 230, 373, 781, 850
StyI	CCWWGG	4 cut(s)	414, 633, 690, 795
TaaI	ACNGT	1 cut(s)	660
TaiI	ACGT	3 cut(s)	276, 489, 681
TaqI	TCGA	2 cut(s)	60, 192
TauI	GCSGC	3 cut(s)	20, 381, 384
TfiI	GAWTC	2 cut(s)	62, 1043
Tru1I	TTAA	1 cut(s)	495
Tru9I	TTAA	1 cut(s)	495
TscAI	CASTG	2 cut(s)	742, 975
TseFI	GTSAC	2 cut(s)	619, 713
TseI	GCWGC	7 cut(s)	503, 575, 809, 947, 1034, 1037, 1049
Tsp45I	GTSAC	2 cut(s)	619, 713
TspDTI	ATGAA	3 cut(s)	659, 803, 818
TspGWI	ACGGA	2 cut(s)	124, 355
TspMI	CCCGGG	1 cut(s)	219
TspRI	CASTG	2 cut(s)	742, 975
Tth111I	GACNNNGTC	1 cut(s)	275
VpaK11BI	GGWCC	2 cut(s)	670, 908
XceI	RCATGY	1 cut(s)	503
XcmI	CCANNNNNNNNNTGG	1 cut(s)	631
XmaI	CCCGGG	1 cut(s)	219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.