Bifunctional DNA N-glycosylase with associated apurinic apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05900 AT1G05900 AT2G31450 AT2G31450 |
| fragaria_vesca | FvH4_4g10690 FvH4_4g10690 FvH4_4g10690 FvH4_4g10690 FvH4_4g10690 FvH4_4g10690 |
| malus_domestica | MD04G1007400.v1.1 |
| prunus_persica | Prupe.1G191600_v2.0.a1 Prupe.1G191600_v2.0.a1 |
| pyrus_communis | pycom04g03440 |
| rosa_chinensis | RchiOBHm_Chr4g0407021 |
| rosa_laevigata | RLG00000008743 |
| rosa_multiflora | Rmu_co8205520.1_g000001 |
| rosa_rugosa | Rorug04G0076900 |
| rosa_samantha | Rh4AG142100 Rh4BG139300 Rh4CG148700 Rh4DG136300 |
| rosa_wichuraiana | Rw4G011580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 300 |
| AcsI | RAATTY | 1 cut(s) | 140 |
| AcyI | GRCGYC | 1 cut(s) | 44 |
| AfaI | GTAC | 1 cut(s) | 157 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 208, 309 |
| AgsI | TTSAA | 3 cut(s) | 22, 126, 259 |
| AjnI | CCWGG | 1 cut(s) | 201 |
| AluBI | AGCT | 2 cut(s) | 80, 176 |
| AluI | AGCT | 2 cut(s) | 80, 176 |
| Alw21I | GWGCWC | 1 cut(s) | 287 |
| Alw26I | GTCTC | 1 cut(s) | 19 |
| Alw44I | GTGCAC | 1 cut(s) | 283 |
| ApaLI | GTGCAC | 1 cut(s) | 283 |
| ApoI | RAATTY | 1 cut(s) | 140 |
| AspS9I | GGNCC | 1 cut(s) | 211 |
| AsuC2I | CCSGG | 1 cut(s) | 91 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| AvaII | GGWCC | 1 cut(s) | 211 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 266, 299 |
| Bbv12I | GWGCWC | 1 cut(s) | 287 |
| BccI | CCATC | 2 cut(s) | 154, 213 |
| BciT130I | CCWGG | 1 cut(s) | 203 |
| BcnI | CCSGG | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 19 |
| BfaI | CTAG | 2 cut(s) | 116, 173 |
| Bme1390I | CCNGG | 2 cut(s) | 91, 203 |
| Bme18I | GGWCC | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 1 cut(s) | 211 |
| BmrFI | CCNGG | 2 cut(s) | 91, 203 |
| BpuMI | CCSGG | 1 cut(s) | 91 |
| BsaHI | GRCGYC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 1 cut(s) | 303 |
| BsaWI | WCCGGW | 1 cut(s) | 287 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 208, 309 |
| BseBI | CCWGG | 1 cut(s) | 203 |
| BseDI | CCNNGG | 1 cut(s) | 303 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 208, 309 |
| BseRI | GAGGAG | 1 cut(s) | 181 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseYI | CCCAGC | 1 cut(s) | 308 |
| BsiHKAI | GWGCWC | 1 cut(s) | 287 |
| BsiSI | CCGG | 2 cut(s) | 91, 288 |
| BslFI | GGGAC | 1 cut(s) | 262 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 208, 309 |
| BsmAI | GTCTC | 1 cut(s) | 19 |
| BsmBI | CGTCTC | 1 cut(s) | 19 |
| BsmFI | GGGAC | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 1 cut(s) | 287 |
| BspACI | CCGC | 1 cut(s) | 300 |
| BssECI | CCNNGG | 1 cut(s) | 303 |
| BssNI | GRCGYC | 1 cut(s) | 44 |
| BssT1I | CCWWGG | 1 cut(s) | 303 |
| Bst2UI | CCWGG | 1 cut(s) | 203 |
| BstACI | GRCGYC | 1 cut(s) | 44 |
| BstC8I | GCNNGC | 1 cut(s) | 324 |
| BstDEI | CTNAG | 1 cut(s) | 215 |
| BstMAI | GTCTC | 1 cut(s) | 19 |
| BstNI | CCWGG | 1 cut(s) | 203 |
| BstSCI | CCNGG | 2 cut(s) | 89, 201 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| Cac8I | GCNNGC | 1 cut(s) | 324 |
| Cfr13I | GGNCC | 1 cut(s) | 211 |
| CseI | GACGC | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 156 |
| CviAII | CATG | 1 cut(s) | 280 |
| CviJI | RGCY | 6 cut(s) | 80, 98, 115, 176, 223, 308 |
| CviKI_1 | RGCY | 6 cut(s) | 80, 98, 115, 176, 223, 308 |
| CviQI | GTAC | 1 cut(s) | 156 |
| DdeI | CTNAG | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 1 cut(s) | 303 |
| Eco47I | GGWCC | 1 cut(s) | 211 |
| EcoO109I | RGGNCCY | 1 cut(s) | 211 |
| EcoRII | CCWGG | 1 cut(s) | 201 |
| EcoT14I | CCWWGG | 1 cut(s) | 303 |
| ErhI | CCWWGG | 1 cut(s) | 303 |
| Esp3I | CGTCTC | 1 cut(s) | 19 |
| FaeI | CATG | 1 cut(s) | 283 |
| FaiI | YATR | 4 cut(s) | 104, 169, 235, 281 |
| FaqI | GGGAC | 1 cut(s) | 262 |
| FatI | CATG | 1 cut(s) | 279 |
| FspBI | CTAG | 2 cut(s) | 116, 173 |
| GsaI | CCCAGC | 1 cut(s) | 312 |
| HapII | CCGG | 2 cut(s) | 91, 288 |
| HgaI | GACGC | 1 cut(s) | 52 |
| Hin1I | GRCGYC | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 283 |
| HindIII | AAGCTT | 1 cut(s) | 78 |
| HpaII | CCGG | 2 cut(s) | 91, 288 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy166II | GTNNAC | 1 cut(s) | 285 |
| Hpy8I | GTNNAC | 1 cut(s) | 285 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4V | TGCA | 3 cut(s) | 136, 285, 296 |
| HpyF3I | CTNAG | 1 cut(s) | 215 |
| Hsp92I | GRCGYC | 1 cut(s) | 44 |
| Hsp92II | CATG | 1 cut(s) | 283 |
| LpnPI | CCDG | 6 cut(s) | 104, 188, 215, 294, 301, 308 |
| MaeI | CTAG | 2 cut(s) | 116, 173 |
| MaeIII | GTNAC | 1 cut(s) | 118 |
| MboII | GAAGA | 1 cut(s) | 138 |
| MhlI | GDGCHC | 1 cut(s) | 287 |
| MluCI | AATT | 3 cut(s) | 5, 131, 140 |
| MnlI | CCTC | 2 cut(s) | 177, 202 |
| MseI | TTAA | 1 cut(s) | 74 |
| MspI | CCGG | 2 cut(s) | 91, 288 |
| MspR9I | CCNGG | 2 cut(s) | 91, 203 |
| MvaI | CCWGG | 1 cut(s) | 203 |
| NciI | CCSGG | 1 cut(s) | 91 |
| NlaIII | CATG | 1 cut(s) | 283 |
| PfoI | TCCNGGA | 1 cut(s) | 201 |
| PpuMI | RGGWCCY | 1 cut(s) | 211 |
| Psp5II | RGGWCCY | 1 cut(s) | 211 |
| Psp6I | CCWGG | 1 cut(s) | 201 |
| PspFI | CCCAGC | 1 cut(s) | 308 |
| PspGI | CCWGG | 1 cut(s) | 201 |
| PspPI | GGNCC | 1 cut(s) | 211 |
| PspPPI | RGGWCCY | 1 cut(s) | 211 |
| RsaI | GTAC | 1 cut(s) | 157 |
| RsaNI | GTAC | 1 cut(s) | 156 |
| SaqAI | TTAA | 1 cut(s) | 74 |
| Sau96I | GGNCC | 1 cut(s) | 211 |
| ScrFI | CCNGG | 2 cut(s) | 91, 203 |
| SduI | GDGCHC | 1 cut(s) | 287 |
| SetI | ASST | 5 cut(s) | 60, 82, 174, 178, 213 |
| SinI | GGWCC | 1 cut(s) | 211 |
| Sse9I | AATT | 3 cut(s) | 5, 131, 140 |
| SsiI | CCGC | 1 cut(s) | 300 |
| SspMI | CTAG | 2 cut(s) | 116, 173 |
| StyD4I | CCNGG | 2 cut(s) | 89, 201 |
| StyI | CCWWGG | 1 cut(s) | 303 |
| TasI | AATT | 3 cut(s) | 5, 131, 140 |
| Tru1I | TTAA | 1 cut(s) | 74 |
| Tru9I | TTAA | 1 cut(s) | 74 |
| TspDTI | ATGAA | 2 cut(s) | 77, 250 |
| VneI | GTGCAC | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 211 |
| XapI | RAATTY | 1 cut(s) | 140 |
| XspI | CTAG | 2 cut(s) | 116, 173 |