The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22110 AT4G15165 |
| fragaria_vesca | FvH4_3g13020 |
| malus_domestica | MD05G1246200.v1.1 MD09G1143900.v1.1 MD10G1227000.v1.1 |
| prunus_persica | Prupe.3G183900_v2.0.a1 Prupe.4G118100_v2.0.a1 |
| pyrus_communis | pycom09g06330 pycom17g12310 |
| rosa_chinensis | RchiOBHm_Chr5g0021211 |
| rosa_laevigata | RLG00000032595 |
| rosa_multiflora | Rmu_co8270601.1_g000001 Rmu_sc0002467.1_g000016 Rmu_sc0003392.1_g000019 Rmu_sc0019507.1_g000001 Rmu_sc0039744.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057290 |
| rosa_rugosa | Rorug05G0065200 |
| rosa_samantha | Rh5AG154100 Rh5CG167400 Rh5DG154200 |
| rosa_wichuraiana | Rw5G013740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 235 |
| AccI | GTMKAC | 1 cut(s) | 239 |
| AdeI | CACNNNGTG | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 166 |
| AgsI | TTSAA | 3 cut(s) | 28, 176, 328 |
| AluBI | AGCT | 1 cut(s) | 4 |
| AluI | AGCT | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 3 cut(s) | 230, 290, 296 |
| BauI | CACGAG | 1 cut(s) | 183 |
| BbsI | GAAGAC | 1 cut(s) | 35 |
| BmiI | GGNNCC | 1 cut(s) | 87 |
| BmsI | GCATC | 1 cut(s) | 148 |
| BpiI | GAAGAC | 1 cut(s) | 35 |
| BsaJI | CCNNGG | 2 cut(s) | 231, 297 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 194, 224 |
| BseDI | CCNNGG | 2 cut(s) | 231, 297 |
| BseGI | GGATG | 1 cut(s) | 137 |
| BseMII | CTCAG | 1 cut(s) | 209 |
| BseYI | CCCAGC | 1 cut(s) | 89 |
| Bsp143I | GATC | 1 cut(s) | 259 |
| Bsp19I | CCATGG | 1 cut(s) | 297 |
| BspCNI | CTCAG | 1 cut(s) | 208 |
| BspLI | GGNNCC | 1 cut(s) | 87 |
| BssECI | CCNNGG | 2 cut(s) | 231, 297 |
| BssMI | GATC | 1 cut(s) | 259 |
| BssSI | CACGAG | 1 cut(s) | 183 |
| BssT1I | CCWWGG | 1 cut(s) | 297 |
| Bst2BI | CACGAG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| Bst6I | CTCTTC | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 249 |
| BstDEI | CTNAG | 1 cut(s) | 195 |
| BstDSI | CCRYGG | 2 cut(s) | 231, 297 |
| BstF5I | GGATG | 1 cut(s) | 137 |
| BstKTI | GATC | 1 cut(s) | 262 |
| BstMBI | GATC | 1 cut(s) | 259 |
| BstNSI | RCATGY | 1 cut(s) | 182 |
| BstV2I | GAAGAC | 1 cut(s) | 35 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 97 |
| BtgI | CCRYGG | 2 cut(s) | 231, 297 |
| BtsCI | GGATG | 1 cut(s) | 137 |
| BtsI | GCAGTG | 1 cut(s) | 100 |
| BtsIMutI | CAGTG | 1 cut(s) | 100 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 249 |
| Csp6I | GTAC | 1 cut(s) | 165 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 213, 248 |
| CviAII | CATG | 3 cut(s) | 139, 179, 298 |
| CviJI | RGCY | 2 cut(s) | 4, 223 |
| CviKI_1 | RGCY | 2 cut(s) | 4, 223 |
| CviQI | GTAC | 1 cut(s) | 165 |
| DdeI | CTNAG | 1 cut(s) | 195 |
| DpnI | GATC | 1 cut(s) | 261 |
| DpnII | GATC | 1 cut(s) | 259 |
| DraIII | CACNNNGTG | 1 cut(s) | 257 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 235 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 235 |
| Eam1104I | CTCTTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 285 |
| Eco130I | CCWWGG | 1 cut(s) | 297 |
| EcoT14I | CCWWGG | 1 cut(s) | 297 |
| ErhI | CCWWGG | 1 cut(s) | 297 |
| FaeI | CATG | 3 cut(s) | 142, 182, 301 |
| FaiI | YATR | 6 cut(s) | 110, 126, 140, 180, 216, 299 |
| FatI | CATG | 3 cut(s) | 138, 178, 297 |
| FblI | GTMKAC | 1 cut(s) | 239 |
| FokI | GGATG | 1 cut(s) | 144 |
| GsaI | CCCAGC | 1 cut(s) | 93 |
| Hin1II | CATG | 3 cut(s) | 142, 182, 301 |
| HinfI | GANTC | 2 cut(s) | 236, 293 |
| HphI | GGTGA | 3 cut(s) | 230, 290, 296 |
| Hpy166II | GTNNAC | 3 cut(s) | 167, 240, 304 |
| Hpy188I | TCNGA | 1 cut(s) | 198 |
| Hpy8I | GTNNAC | 3 cut(s) | 167, 240, 304 |
| HpyAV | CCTTC | 2 cut(s) | 32, 275 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 1 cut(s) | 182 |
| HpyF3I | CTNAG | 1 cut(s) | 195 |
| Hsp92II | CATG | 3 cut(s) | 142, 182, 301 |
| Kzo9I | GATC | 1 cut(s) | 259 |
| LpnPI | CCDG | 4 cut(s) | 68, 103, 190, 248 |
| LweI | GCATC | 1 cut(s) | 148 |
| MalI | GATC | 1 cut(s) | 261 |
| MboI | GATC | 1 cut(s) | 259 |
| MboII | GAAGA | 2 cut(s) | 40, 302 |
| MluCI | AATT | 2 cut(s) | 105, 114 |
| MlyI | GAGTC | 2 cut(s) | 245, 302 |
| NcoI | CCATGG | 1 cut(s) | 297 |
| NdeII | GATC | 1 cut(s) | 259 |
| NlaIII | CATG | 3 cut(s) | 142, 182, 301 |
| NlaIV | GGNNCC | 1 cut(s) | 87 |
| NspI | RCATGY | 1 cut(s) | 182 |
| PleI | GAGTC | 2 cut(s) | 244, 301 |
| PpsI | GAGTC | 2 cut(s) | 244, 301 |
| PspFI | CCCAGC | 1 cut(s) | 89 |
| PspN4I | GGNNCC | 1 cut(s) | 87 |
| RsaI | GTAC | 1 cut(s) | 166 |
| RsaNI | GTAC | 1 cut(s) | 165 |
| Sau3AI | GATC | 1 cut(s) | 259 |
| SchI | GAGTC | 2 cut(s) | 245, 302 |
| SetI | ASST | 4 cut(s) | 6, 43, 209, 286 |
| SfaNI | GCATC | 1 cut(s) | 148 |
| Sse9I | AATT | 2 cut(s) | 105, 114 |
| StyI | CCWWGG | 1 cut(s) | 297 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TasI | AATT | 2 cut(s) | 105, 114 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TspDTI | ATGAA | 2 cut(s) | 303, 303 |
| TspRI | CASTG | 1 cut(s) | 100 |
| XceI | RCATGY | 1 cut(s) | 182 |
| XmiI | GTMKAC | 1 cut(s) | 239 |