Protein RETICULATA-related
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08630 AT3G08640 |
| fragaria_vesca | FvH4_6g09440 |
| malus_domestica | MD04G1177700.v1.1 MD12G1193000.v1.1 |
| prunus_persica | Prupe.6G297600_v2.0.a1 |
| pyrus_communis | pycom04g15670 |
| rosa_chinensis | RchiOBHm_Chr3g0459911 |
| rosa_laevigata | RLG00000025052 |
| rosa_multiflora | Rmu_co8396657.1_g000001 Rmu_sc0000240.1_g000046 Rmu_sc0016534.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00419920 |
| rosa_rugosa | Rorug03G0038700.1 |
| rosa_samantha | Rh3AG097500 Rh3BG100200 Rh3CG102000 Rh3DG101700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 293 |
| Acc65I | GGTACC | 1 cut(s) | 828 |
| AccB1I | GGYRCC | 4 cut(s) | 209, 224, 526, 828 |
| AccI | GTMKAC | 2 cut(s) | 642, 1058 |
| AccII | CGCG | 2 cut(s) | 132, 258 |
| AclWI | GGATC | 3 cut(s) | 353, 976, 1009 |
| AcoI | YGGCCR | 4 cut(s) | 3, 36, 214, 582 |
| AcyI | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| AfaI | GTAC | 2 cut(s) | 694, 830 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 446, 998 |
| AflIII | ACRYGT | 1 cut(s) | 591 |
| AgsI | TTSAA | 4 cut(s) | 99, 781, 841, 919 |
| AleI | CACNNNNGTG | 1 cut(s) | 807 |
| AluBI | AGCT | 6 cut(s) | 19, 408, 460, 534, 576, 721 |
| AluI | AGCT | 6 cut(s) | 19, 408, 460, 534, 576, 721 |
| Alw21I | GWGCWC | 1 cut(s) | 462 |
| Alw26I | GTCTC | 2 cut(s) | 59, 743 |
| AlwI | GGATC | 3 cut(s) | 353, 976, 1009 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 411 |
| Ama87I | CYCGRG | 1 cut(s) | 629 |
| AoxI | GGCC | 9 cut(s) | 3, 36, 133, 170, 214, 437, 448, 582, 613 |
| ApeKI | GCWGC | 7 cut(s) | 24, 72, 492, 816, 871, 980, 1007 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 639, 671, 728, 760 |
| Asp718I | GGTACC | 1 cut(s) | 828 |
| AspLEI | GCGC | 4 cut(s) | 212, 227, 529, 700 |
| AspS9I | GGNCC | 4 cut(s) | 146, 171, 438, 736 |
| AsuC2I | CCSGG | 4 cut(s) | 218, 436, 603, 740 |
| AsuHPI | GGTGA | 1 cut(s) | 799 |
| AsuII | TTCGAA | 2 cut(s) | 597, 704 |
| AvaI | CYCGRG | 1 cut(s) | 629 |
| AvaII | GGWCC | 2 cut(s) | 146, 736 |
| BalI | TGGCCA | 1 cut(s) | 38 |
| BanI | GGYRCC | 4 cut(s) | 209, 224, 526, 828 |
| BanII | GRGCYC | 2 cut(s) | 462, 608 |
| BbsI | GAAGAC | 2 cut(s) | 463, 885 |
| Bbv12I | GWGCWC | 1 cut(s) | 462 |
| BbvCI | CCTCAGC | 1 cut(s) | 722 |
| BbvI | GCAGC | 7 cut(s) | 11, 84, 479, 828, 858, 967, 994 |
| BccI | CCATC | 3 cut(s) | 330, 379, 727 |
| BceAI | ACGGC | 1 cut(s) | 223 |
| BclI | TGATCA | 1 cut(s) | 714 |
| BcnI | CCSGG | 4 cut(s) | 218, 436, 603, 740 |
| BcoDI | GTCTC | 2 cut(s) | 59, 743 |
| BfaI | CTAG | 1 cut(s) | 345 |
| BfmI | CTRYAG | 1 cut(s) | 1008 |
| BfoI | RGCGCY | 3 cut(s) | 213, 228, 530 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 222 |
| BglII | AGATCT | 1 cut(s) | 341 |
| Bme1390I | CCNGG | 4 cut(s) | 218, 436, 603, 740 |
| Bme18I | GGWCC | 2 cut(s) | 146, 736 |
| BmeT110I | CYCGRG | 1 cut(s) | 629 |
| BmgT120I | GGNCC | 4 cut(s) | 146, 171, 438, 736 |
| BmiI | GGNNCC | 7 cut(s) | 148, 211, 226, 254, 528, 738, 830 |
| BmrFI | CCNGG | 4 cut(s) | 218, 436, 603, 740 |
| BmrI | ACTGGG | 2 cut(s) | 75, 84 |
| BmsI | GCATC | 1 cut(s) | 84 |
| BmuI | ACTGGG | 2 cut(s) | 75, 84 |
| BoxI | GACNNNNGTC | 2 cut(s) | 482, 638 |
| BpiI | GAAGAC | 2 cut(s) | 463, 885 |
| BpmI | CTGGAG | 1 cut(s) | 34 |
| Bpu10I | CCTNAGC | 1 cut(s) | 722 |
| Bpu14I | TTCGAA | 2 cut(s) | 597, 704 |
| BpuMI | CCSGG | 4 cut(s) | 218, 436, 603, 740 |
| BsaBI | GATNNNNATC | 1 cut(s) | 340 |
| BsaHI | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| BsaI | GGTCTC | 1 cut(s) | 743 |
| BsaJI | CCNNGG | 4 cut(s) | 217, 256, 418, 628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 842, 872 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 446, 998 |
| Bse118I | RCCGGY | 3 cut(s) | 212, 227, 689 |
| Bse1I | ACTGG | 5 cut(s) | 51, 81, 90, 528, 1029 |
| Bse8I | GATNNNNATC | 1 cut(s) | 340 |
| BseDI | CCNNGG | 4 cut(s) | 217, 256, 418, 628 |
| BseGI | GGATG | 3 cut(s) | 75, 341, 942 |
| BseJI | GATNNNNATC | 1 cut(s) | 340 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 446, 998 |
| BseMII | CTCAG | 4 cut(s) | 377, 713, 899, 975 |
| BseNI | ACTGG | 5 cut(s) | 51, 81, 90, 528, 1029 |
| BseRI | GAGGAG | 3 cut(s) | 249, 404, 1046 |
| BseX3I | CGGCCG | 1 cut(s) | 214 |
| BseXI | GCAGC | 7 cut(s) | 11, 84, 479, 828, 858, 967, 994 |
| BseYI | CCCAGC | 1 cut(s) | 15 |
| Bsh1236I | CGCG | 2 cut(s) | 132, 258 |
| Bsh1285I | CGRYCG | 1 cut(s) | 217 |
| BshFI | GGCC | 9 cut(s) | 5, 38, 135, 172, 216, 439, 450, 584, 615 |
| BshNI | GGYRCC | 4 cut(s) | 209, 224, 526, 828 |
| BsiEI | CGRYCG | 1 cut(s) | 217 |
| BsiHKAI | GWGCWC | 1 cut(s) | 462 |
| BsiHKCI | CYCGRG | 1 cut(s) | 629 |
| BslFI | GGGAC | 1 cut(s) | 646 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 446, 998 |
| BsmAI | GTCTC | 2 cut(s) | 59, 743 |
| BsmFI | GGGAC | 1 cut(s) | 646 |
| BsmI | GAATGC | 3 cut(s) | 495, 787, 1042 |
| BsnI | GGCC | 9 cut(s) | 5, 38, 135, 172, 216, 439, 450, 584, 615 |
| Bso31I | GGTCTC | 1 cut(s) | 743 |
| BsoBI | CYCGRG | 1 cut(s) | 629 |
| Bsp119I | TTCGAA | 2 cut(s) | 597, 704 |
| Bsp1286I | GDGCHC | 2 cut(s) | 462, 608 |
| Bsp143I | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| BspANI | GGCC | 9 cut(s) | 5, 38, 135, 172, 216, 439, 450, 584, 615 |
| BspCNI | CTCAG | 4 cut(s) | 376, 714, 900, 976 |
| BspFNI | CGCG | 2 cut(s) | 132, 258 |
| BspLI | GGNNCC | 7 cut(s) | 148, 211, 226, 254, 528, 738, 830 |
| BspMAI | CTGCAG | 1 cut(s) | 1012 |
| BspPI | GGATC | 3 cut(s) | 353, 976, 1009 |
| BspT104I | TTCGAA | 2 cut(s) | 597, 704 |
| BspT107I | GGYRCC | 4 cut(s) | 209, 224, 526, 828 |
| BspTNI | GGTCTC | 1 cut(s) | 743 |
| BsrFI | RCCGGY | 3 cut(s) | 212, 227, 689 |
| BsrI | ACTGG | 5 cut(s) | 51, 81, 90, 528, 1029 |
| BssAI | RCCGGY | 3 cut(s) | 212, 227, 689 |
| BssECI | CCNNGG | 4 cut(s) | 217, 256, 418, 628 |
| BssMI | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| BssNI | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| Bst6I | CTCTTC | 1 cut(s) | 267 |
| BstACI | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 659, 686 |
| BstBI | TTCGAA | 2 cut(s) | 597, 704 |
| BstC8I | GCNNGC | 7 cut(s) | 214, 229, 574, 586, 617, 687, 882 |
| BstDEI | CTNAG | 4 cut(s) | 363, 722, 908, 984 |
| BstDSI | CCRYGG | 1 cut(s) | 256 |
| BstF5I | GGATG | 3 cut(s) | 75, 341, 942 |
| BstFNI | CGCG | 2 cut(s) | 132, 258 |
| BstH2I | RGCGCY | 3 cut(s) | 213, 228, 530 |
| BstHHI | GCGC | 4 cut(s) | 212, 227, 529, 700 |
| BstKTI | GATC | 7 cut(s) | 178, 344, 361, 567, 717, 971, 1004 |
| BstMAI | GTCTC | 2 cut(s) | 59, 743 |
| BstMBI | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| BstMCI | CGRYCG | 1 cut(s) | 217 |
| BstNSI | RCATGY | 1 cut(s) | 595 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 482, 638 |
| BstSCI | CCNGG | 4 cut(s) | 216, 434, 601, 738 |
| BstSFI | CTRYAG | 1 cut(s) | 1008 |
| BstUI | CGCG | 2 cut(s) | 132, 258 |
| BstV1I | GCAGC | 7 cut(s) | 11, 84, 479, 828, 858, 967, 994 |
| BstV2I | GAAGAC | 2 cut(s) | 463, 885 |
| BstX2I | RGATCY | 1 cut(s) | 341 |
| BstYI | RGATCY | 1 cut(s) | 341 |
| BstZI | CGGCCG | 1 cut(s) | 214 |
| BsuRI | GGCC | 9 cut(s) | 5, 38, 135, 172, 216, 439, 450, 584, 615 |
| BtgI | CCRYGG | 1 cut(s) | 256 |
| BtsCI | GGATG | 3 cut(s) | 75, 341, 942 |
| Cac8I | GCNNGC | 7 cut(s) | 214, 229, 574, 586, 617, 687, 882 |
| CaiI | CAGNNNCTG | 1 cut(s) | 411 |
| CfoI | GCGC | 4 cut(s) | 212, 227, 529, 700 |
| Cfr10I | RCCGGY | 3 cut(s) | 212, 227, 689 |
| Cfr13I | GGNCC | 4 cut(s) | 146, 171, 438, 736 |
| Cfr42I | CCGCGG | 1 cut(s) | 259 |
| CseI | GACGC | 1 cut(s) | 403 |
| Csp6I | GTAC | 2 cut(s) | 693, 829 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 756, 791 |
| CviAII | CATG | 4 cut(s) | 427, 514, 592, 805 |
| CviQI | GTAC | 2 cut(s) | 693, 829 |
| DdeI | CTNAG | 4 cut(s) | 363, 722, 908, 984 |
| DinI | GGCGCC | 3 cut(s) | 211, 226, 528 |
| DpnI | GATC | 7 cut(s) | 177, 343, 360, 566, 716, 970, 1003 |
| DpnII | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| EaeI | YGGCCR | 4 cut(s) | 3, 36, 214, 582 |
| EagI | CGGCCG | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 1 cut(s) | 267 |
| EarI | CTCTTC | 1 cut(s) | 267 |
| EciI | GGCGGA | 3 cut(s) | 246, 529, 535 |
| Ecl136II | GAGCTC | 1 cut(s) | 460 |
| EclXI | CGGCCG | 1 cut(s) | 214 |
| Eco24I | GRGCYC | 2 cut(s) | 462, 608 |
| Eco31I | GGTCTC | 1 cut(s) | 743 |
| Eco47I | GGWCC | 2 cut(s) | 146, 736 |
| Eco52I | CGGCCG | 1 cut(s) | 214 |
| Eco53kI | GAGCTC | 1 cut(s) | 460 |
| Eco88I | CYCGRG | 1 cut(s) | 629 |
| EcoICRI | GAGCTC | 1 cut(s) | 460 |
| EcoT38I | GRGCYC | 2 cut(s) | 462, 608 |
| EgeI | GGCGCC | 3 cut(s) | 211, 226, 528 |
| EheI | GGCGCC | 3 cut(s) | 211, 226, 528 |
| FaeI | CATG | 4 cut(s) | 430, 517, 595, 808 |
| FaiI | YATR | 6 cut(s) | 323, 428, 515, 593, 806, 855 |
| FaqI | GGGAC | 1 cut(s) | 646 |
| FatI | CATG | 4 cut(s) | 426, 513, 591, 804 |
| FbaI | TGATCA | 1 cut(s) | 714 |
| FblI | GTMKAC | 2 cut(s) | 642, 1058 |
| FokI | GGATG | 3 cut(s) | 62, 348, 949 |
| FriOI | GRGCYC | 2 cut(s) | 462, 608 |
| FspBI | CTAG | 1 cut(s) | 345 |
| GlaI | GCGC | 4 cut(s) | 211, 226, 528, 699 |
| GsaI | CCCAGC | 1 cut(s) | 19 |
| GsuI | CTGGAG | 1 cut(s) | 34 |
| HaeII | RGCGCY | 3 cut(s) | 213, 228, 530 |
| HaeIII | GGCC | 9 cut(s) | 5, 38, 135, 172, 216, 439, 450, 584, 615 |
| HgaI | GACGC | 1 cut(s) | 403 |
| HhaI | GCGC | 4 cut(s) | 212, 227, 529, 700 |
| Hin1I | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| Hin1II | CATG | 4 cut(s) | 430, 517, 595, 808 |
| Hin6I | GCGC | 4 cut(s) | 210, 225, 527, 698 |
| HinP1I | GCGC | 4 cut(s) | 210, 225, 527, 698 |
| HincII | GTYRAC | 2 cut(s) | 963, 1059 |
| HindII | GTYRAC | 2 cut(s) | 963, 1059 |
| HinfI | GANTC | 6 cut(s) | 275, 348, 402, 478, 622, 672 |
| HphI | GGTGA | 1 cut(s) | 799 |
| Hpy166II | GTNNAC | 3 cut(s) | 643, 963, 1059 |
| Hpy188I | TCNGA | 6 cut(s) | 61, 146, 330, 401, 501, 909 |
| Hpy188III | TCNNGA | 3 cut(s) | 345, 475, 631 |
| Hpy8I | GTNNAC | 3 cut(s) | 643, 963, 1059 |
| Hpy99I | CGWCG | 5 cut(s) | 292, 295, 401, 488, 491 |
| HpyAV | CCTTC | 4 cut(s) | 162, 570, 859, 1009 |
| HpyCH4IV | ACGT | 2 cut(s) | 290, 635 |
| HpyCH4V | TGCA | 2 cut(s) | 495, 1010 |
| HpyF3I | CTNAG | 4 cut(s) | 363, 722, 908, 984 |
| HpySE526I | ACGT | 2 cut(s) | 290, 635 |
| Hsp92I | GRCGYC | 4 cut(s) | 210, 225, 290, 527 |
| Hsp92II | CATG | 4 cut(s) | 430, 517, 595, 808 |
| HspAI | GCGC | 4 cut(s) | 210, 225, 527, 698 |
| KasI | GGCGCC | 3 cut(s) | 209, 224, 526 |
| KpnI | GGTACC | 1 cut(s) | 832 |
| KroI | GCCGGC | 2 cut(s) | 212, 227 |
| KroNI | GCCGGC | 2 cut(s) | 214, 229 |
| Ksp22I | TGATCA | 1 cut(s) | 714 |
| KspI | CCGCGG | 1 cut(s) | 259 |
| Kzo9I | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| LmnI | GCTCC | 3 cut(s) | 24, 252, 413 |
| Lsp1109I | GCAGC | 7 cut(s) | 11, 84, 479, 828, 858, 967, 994 |
| LweI | GCATC | 1 cut(s) | 84 |
| MaeI | CTAG | 1 cut(s) | 345 |
| MaeII | ACGT | 2 cut(s) | 290, 635 |
| MaeIII | GTNAC | 2 cut(s) | 83, 787 |
| MalI | GATC | 7 cut(s) | 177, 343, 360, 566, 716, 970, 1003 |
| MboI | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| MboII | GAAGA | 7 cut(s) | 87, 284, 463, 559, 739, 742, 885 |
| MflI | RGATCY | 1 cut(s) | 341 |
| MhlI | GDGCHC | 2 cut(s) | 462, 608 |
| MlsI | TGGCCA | 1 cut(s) | 38 |
| MluCI | AATT | 4 cut(s) | 99, 442, 798, 820 |
| MluNI | TGGCCA | 1 cut(s) | 38 |
| Mly113I | GGCGCC | 3 cut(s) | 210, 225, 527 |
| MlyI | GAGTC | 4 cut(s) | 284, 357, 411, 472 |
| MmeI | TCCRAC | 3 cut(s) | 84, 379, 649 |
| Mox20I | TGGCCA | 1 cut(s) | 38 |
| MreI | CGCCGGCG | 1 cut(s) | 227 |
| MroNI | GCCGGC | 2 cut(s) | 212, 227 |
| MscI | TGGCCA | 1 cut(s) | 38 |
| MseI | TTAA | 2 cut(s) | 375, 888 |
| MslI | CAYNNNNRTG | 3 cut(s) | 512, 807, 809 |
| Msp20I | TGGCCA | 1 cut(s) | 38 |
| MspA1I | CMGCKG | 4 cut(s) | 24, 258, 576, 880 |
| MspR9I | CCNGG | 4 cut(s) | 218, 436, 603, 740 |
| Mva1269I | GAATGC | 3 cut(s) | 495, 787, 1042 |
| MvnI | CGCG | 2 cut(s) | 132, 258 |
| NaeI | GCCGGC | 2 cut(s) | 214, 229 |
| NarI | GGCGCC | 3 cut(s) | 210, 225, 527 |
| NciI | CCSGG | 4 cut(s) | 218, 436, 603, 740 |
| NdeII | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| NgoMIV | GCCGGC | 2 cut(s) | 212, 227 |
| NlaIII | CATG | 4 cut(s) | 430, 517, 595, 808 |
| NlaIV | GGNNCC | 7 cut(s) | 148, 211, 226, 254, 528, 738, 830 |
| NmeAIII | GCCGAG | 2 cut(s) | 399, 555 |
| NmuCI | GTSAC | 1 cut(s) | 787 |
| NspI | RCATGY | 1 cut(s) | 595 |
| NspV | TTCGAA | 2 cut(s) | 597, 704 |
| OliI | CACNNNNGTG | 1 cut(s) | 807 |
| PciI | ACATGT | 1 cut(s) | 591 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 171, 284, 453 |
| PctI | GAATGC | 3 cut(s) | 495, 787, 1042 |
| PdiI | GCCGGC | 2 cut(s) | 214, 229 |
| PfeI | GAWTC | 2 cut(s) | 622, 672 |
| PleI | GAGTC | 4 cut(s) | 283, 356, 410, 472 |
| PluTI | GGCGCC | 3 cut(s) | 213, 228, 530 |
| PpsI | GAGTC | 4 cut(s) | 283, 356, 410, 472 |
| PscI | ACATGT | 1 cut(s) | 591 |
| PshAI | GACNNNNGTC | 2 cut(s) | 482, 638 |
| Psp124BI | GAGCTC | 1 cut(s) | 462 |
| PspFI | CCCAGC | 1 cut(s) | 15 |
| PspN4I | GGNNCC | 7 cut(s) | 148, 211, 226, 254, 528, 738, 830 |
| PspPI | GGNCC | 4 cut(s) | 146, 171, 438, 736 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 76, 108 |
| PstI | CTGCAG | 1 cut(s) | 1012 |
| PstNI | CAGNNNCTG | 1 cut(s) | 411 |
| PsuI | RGATCY | 1 cut(s) | 341 |
| PvuII | CAGCTG | 1 cut(s) | 576 |
| RsaI | GTAC | 2 cut(s) | 694, 830 |
| RsaNI | GTAC | 2 cut(s) | 693, 829 |
| RseI | CAYNNNNRTG | 3 cut(s) | 512, 807, 809 |
| SacI | GAGCTC | 1 cut(s) | 462 |
| SacII | CCGCGG | 1 cut(s) | 259 |
| SalI | GTCGAC | 1 cut(s) | 1057 |
| SaqAI | TTAA | 2 cut(s) | 375, 888 |
| Sau3AI | GATC | 7 cut(s) | 175, 341, 358, 564, 714, 968, 1001 |
| Sau96I | GGNCC | 4 cut(s) | 146, 171, 438, 736 |
| SchI | GAGTC | 4 cut(s) | 284, 357, 411, 472 |
| ScrFI | CCNGG | 4 cut(s) | 218, 436, 603, 740 |
| SduI | GDGCHC | 2 cut(s) | 462, 608 |
| SfaNI | GCATC | 1 cut(s) | 84 |
| SfcI | CTRYAG | 1 cut(s) | 1008 |
| SfoI | GGCGCC | 3 cut(s) | 211, 226, 528 |
| Sfr303I | CCGCGG | 1 cut(s) | 259 |
| SfuI | TTCGAA | 2 cut(s) | 597, 704 |
| SgrAI | CRCCGGYG | 1 cut(s) | 227 |
| SgrBI | CCGCGG | 1 cut(s) | 259 |
| SinI | GGWCC | 2 cut(s) | 146, 736 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 512, 807, 809 |
| Sse9I | AATT | 4 cut(s) | 99, 442, 798, 820 |
| SspDI | GGCGCC | 3 cut(s) | 209, 224, 526 |
| SspMI | CTAG | 1 cut(s) | 345 |
| SstI | GAGCTC | 1 cut(s) | 462 |
| StyD4I | CCNGG | 4 cut(s) | 216, 434, 601, 738 |
| TaiI | ACGT | 2 cut(s) | 293, 638 |
| TaqI | TCGA | 8 cut(s) | 278, 287, 462, 476, 563, 597, 704, 1058 |
| TasI | AATT | 4 cut(s) | 99, 442, 798, 820 |
| TfiI | GAWTC | 2 cut(s) | 622, 672 |
| Tru1I | TTAA | 2 cut(s) | 375, 888 |
| Tru9I | TTAA | 2 cut(s) | 375, 888 |
| TseFI | GTSAC | 1 cut(s) | 787 |
| TseI | GCWGC | 7 cut(s) | 24, 72, 492, 816, 871, 980, 1007 |
| Tsp45I | GTSAC | 1 cut(s) | 787 |
| TspDTI | ATGAA | 1 cut(s) | 285 |
| TspGWI | ACGGA | 2 cut(s) | 180, 360 |
| VpaK11BI | GGWCC | 2 cut(s) | 146, 736 |
| XbaI | TCTAGA | 1 cut(s) | 344 |
| XceI | RCATGY | 1 cut(s) | 595 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 157 |
| XmiI | GTMKAC | 2 cut(s) | 642, 1058 |
| XspI | CTAG | 1 cut(s) | 345 |
| ZraI | GACGTC | 1 cut(s) | 291 |