Embryonic protein DC-8-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36640 AT2G36640 AT3G53040 |
| fragaria_vesca | FvH4_6g17400 |
| malus_domestica | MD09G1267600.v1.1 |
| prunus_persica | Prupe.7G121500_v2.0.a1 Prupe.7G121500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr3g0471651 |
| rosa_laevigata | RLG00000024148 |
| rosa_multiflora | Rmu_co8483845.1_g000001 Rmu_sc0005631.1_g000008 |
| rosa_roxburghii | Rroxscaffold_6G00409690 |
| rosa_rugosa | Rorug03G0118600 |
| rosa_samantha | Rh3AG169800 Rh3BG195500 Rh3CG186200 Rh3CG195500 Rh3DG179500 |
| rosa_wichuraiana | Rw0G008960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 292 |
| AccBSI | CCGCTC | 1 cut(s) | 1426 |
| AccI | GTMKAC | 2 cut(s) | 779, 1437 |
| AccII | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| AclWI | GGATC | 1 cut(s) | 1379 |
| AcoI | YGGCCR | 2 cut(s) | 218, 1335 |
| AcuI | CTGAAG | 2 cut(s) | 867, 969 |
| AcvI | CACGTG | 2 cut(s) | 1226, 1235 |
| AfaI | GTAC | 7 cut(s) | 473, 539, 605, 671, 1114, 1249, 1284 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 216, 522, 549 |
| AflII | CTTAAG | 2 cut(s) | 152, 1346 |
| AgsI | TTSAA | 1 cut(s) | 1381 |
| AjnI | CCWGG | 2 cut(s) | 28, 1387 |
| AleI | CACNNNNGTG | 3 cut(s) | 584, 650, 815 |
| AluBI | AGCT | 8 cut(s) | 190, 785, 1010, 1030, 1106, 1121, 1155, 1192 |
| AluI | AGCT | 8 cut(s) | 190, 785, 1010, 1030, 1106, 1121, 1155, 1192 |
| AlwI | GGATC | 1 cut(s) | 1379 |
| Ama87I | CYCGRG | 1 cut(s) | 1324 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1349, 1381 |
| AspLEI | GCGC | 2 cut(s) | 1323, 1431 |
| AspS9I | GGNCC | 5 cut(s) | 552, 636, 1075, 1257, 1462 |
| AsuC2I | CCSGG | 2 cut(s) | 1325, 1326 |
| AsuHPI | GGTGA | 3 cut(s) | 265, 611, 1004 |
| AvaI | CYCGRG | 1 cut(s) | 1324 |
| AvaII | GGWCC | 3 cut(s) | 1075, 1257, 1462 |
| BaeGI | GKGCMC | 1 cut(s) | 1130 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 504, 537 |
| BanII | GRGCYC | 1 cut(s) | 837 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 403, 435 |
| BbrPI | CACGTG | 2 cut(s) | 1226, 1235 |
| BbsI | GAAGAC | 2 cut(s) | 248, 950 |
| BbvCI | CCTCAGC | 3 cut(s) | 465, 927, 1031 |
| BccI | CCATC | 3 cut(s) | 10, 1015, 1187 |
| BceAI | ACGGC | 1 cut(s) | 906 |
| BciT130I | CCWGG | 2 cut(s) | 30, 1389 |
| BciVI | GTATCC | 1 cut(s) | 505 |
| BcnI | CCSGG | 2 cut(s) | 1325, 1326 |
| BfaI | CTAG | 1 cut(s) | 1011 |
| BfmI | CTRYAG | 3 cut(s) | 582, 1116, 1131 |
| BfrI | CTTAAG | 2 cut(s) | 152, 1346 |
| BfuI | GTATCC | 1 cut(s) | 505 |
| BglI | GCCNNNNNGGC | 4 cut(s) | 350, 503, 560, 626 |
| BlpI | GCTNAGC | 1 cut(s) | 378 |
| Bme1390I | CCNGG | 4 cut(s) | 30, 1325, 1326, 1389 |
| Bme18I | GGWCC | 3 cut(s) | 1075, 1257, 1462 |
| BmeT110I | CYCGRG | 1 cut(s) | 1324 |
| BmgT120I | GGNCC | 5 cut(s) | 552, 636, 1075, 1257, 1462 |
| BmiI | GGNNCC | 2 cut(s) | 553, 637 |
| BmrFI | CCNGG | 4 cut(s) | 30, 1325, 1326, 1389 |
| BmsI | GCATC | 6 cut(s) | 109, 163, 349, 436, 1165, 1317 |
| BpiI | GAAGAC | 2 cut(s) | 248, 950 |
| BpmI | CTGGAG | 2 cut(s) | 201, 212 |
| Bpu10I | CCTNAGC | 6 cut(s) | 465, 927, 1031, 1037, 1107, 1122 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 378 |
| BpuMI | CCSGG | 2 cut(s) | 1325, 1326 |
| BsaAI | YACGTR | 2 cut(s) | 1226, 1235 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1307 |
| BsaI | GGTCTC | 3 cut(s) | 278, 398, 989 |
| BsaWI | WCCGGW | 1 cut(s) | 407 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1156, 1186, 1249, 1279 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 216, 522, 549 |
| Bse118I | RCCGGY | 3 cut(s) | 62, 220, 596 |
| Bse1I | ACTGG | 1 cut(s) | 856 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1307 |
| BseBI | CCWGG | 2 cut(s) | 30, 1389 |
| BseGI | GGATG | 3 cut(s) | 364, 451, 1198 |
| BseJI | GATNNNNATC | 1 cut(s) | 1307 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 216, 522, 549 |
| BseMII | CTCAG | 6 cut(s) | 456, 503, 777, 885, 918, 1022 |
| BseNI | ACTGG | 1 cut(s) | 856 |
| BseRI | GAGGAG | 7 cut(s) | 209, 482, 581, 680, 1040, 1232, 1253 |
| BseSI | GKGCMC | 1 cut(s) | 1130 |
| BseX3I | CGGCCG | 1 cut(s) | 218 |
| BseYI | CCCAGC | 1 cut(s) | 233 |
| BsgI | GTGCAG | 1 cut(s) | 1215 |
| Bsh1236I | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| Bsh1285I | CGRYCG | 2 cut(s) | 221, 1090 |
| BsiEI | CGRYCG | 2 cut(s) | 221, 1090 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1324 |
| BsiSI | CCGG | 6 cut(s) | 63, 221, 408, 597, 1325, 1446 |
| BslFI | GGGAC | 1 cut(s) | 1328 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 216, 522, 549 |
| BsmBI | CGTCTC | 2 cut(s) | 881, 977 |
| BsmFI | GGGAC | 1 cut(s) | 1328 |
| Bso31I | GGTCTC | 3 cut(s) | 278, 398, 989 |
| BsoBI | CYCGRG | 1 cut(s) | 1324 |
| Bsp1286I | GDGCHC | 2 cut(s) | 837, 1130 |
| Bsp143I | GATC | 1 cut(s) | 1384 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 378 |
| BspCNI | CTCAG | 6 cut(s) | 457, 502, 778, 886, 919, 1023 |
| BspFNI | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| BspHI | TCATGA | 1 cut(s) | 837 |
| BspLI | GGNNCC | 2 cut(s) | 553, 637 |
| BspMAI | CTGCAG | 2 cut(s) | 1120, 1135 |
| BspPI | GGATC | 1 cut(s) | 1379 |
| BspTI | CTTAAG | 2 cut(s) | 152, 1346 |
| BspTNI | GGTCTC | 3 cut(s) | 278, 398, 989 |
| BsrBI | CCGCTC | 1 cut(s) | 1426 |
| BsrFI | RCCGGY | 3 cut(s) | 62, 220, 596 |
| BsrI | ACTGG | 1 cut(s) | 856 |
| BssAI | RCCGGY | 3 cut(s) | 62, 220, 596 |
| BssMI | GATC | 1 cut(s) | 1384 |
| BssNAI | GTATAC | 1 cut(s) | 780 |
| Bst1107I | GTATAC | 1 cut(s) | 780 |
| Bst2UI | CCWGG | 2 cut(s) | 30, 1389 |
| Bst4CI | ACNGT | 6 cut(s) | 520, 586, 652, 817, 901, 1079 |
| Bst6I | CTCTTC | 1 cut(s) | 945 |
| BstAFI | CTTAAG | 2 cut(s) | 152, 1346 |
| BstBAI | YACGTR | 2 cut(s) | 1226, 1235 |
| BstC8I | GCNNGC | 3 cut(s) | 78, 222, 1190 |
| BstDSI | CCRYGG | 2 cut(s) | 210, 1338 |
| BstF5I | GGATG | 3 cut(s) | 364, 451, 1198 |
| BstFNI | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| BstHHI | GCGC | 2 cut(s) | 1323, 1431 |
| BstKTI | GATC | 1 cut(s) | 1387 |
| BstMBI | GATC | 1 cut(s) | 1384 |
| BstMCI | CGRYCG | 2 cut(s) | 221, 1090 |
| BstNI | CCWGG | 2 cut(s) | 30, 1389 |
| BstNSI | RCATGY | 1 cut(s) | 80 |
| BstSCI | CCNGG | 4 cut(s) | 28, 1323, 1324, 1387 |
| BstSFI | CTRYAG | 3 cut(s) | 582, 1116, 1131 |
| BstSLI | GKGCMC | 1 cut(s) | 1130 |
| BstUI | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| BstV2I | GAAGAC | 2 cut(s) | 248, 950 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1213, 1367 |
| BstZ17I | GTATAC | 1 cut(s) | 780 |
| BstZI | CGGCCG | 1 cut(s) | 218 |
| BsuI | GTATCC | 1 cut(s) | 505 |
| BtgI | CCRYGG | 2 cut(s) | 210, 1338 |
| BtgZI | GCGATG | 1 cut(s) | 467 |
| BtsCI | GGATG | 3 cut(s) | 364, 451, 1198 |
| BtsI | GCAGTG | 4 cut(s) | 261, 483, 1128, 1474 |
| BtsIMutI | CAGTG | 5 cut(s) | 261, 483, 591, 1128, 1474 |
| Cac8I | GCNNGC | 3 cut(s) | 78, 222, 1190 |
| CciI | TCATGA | 1 cut(s) | 837 |
| CfoI | GCGC | 2 cut(s) | 1323, 1431 |
| Cfr10I | RCCGGY | 3 cut(s) | 62, 220, 596 |
| Cfr13I | GGNCC | 5 cut(s) | 552, 636, 1075, 1257, 1462 |
| Cfr42I | CCGCGG | 2 cut(s) | 213, 1341 |
| Cfr9I | CCCGGG | 1 cut(s) | 1324 |
| Csp6I | GTAC | 7 cut(s) | 472, 538, 604, 670, 1113, 1248, 1283 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 811, 846, 1191, 1226 |
| CviAII | CATG | 5 cut(s) | 8, 77, 107, 838, 1072 |
| CviQI | GTAC | 7 cut(s) | 472, 538, 604, 670, 1113, 1248, 1283 |
| DpnI | GATC | 1 cut(s) | 1386 |
| DpnII | GATC | 1 cut(s) | 1384 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 292 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 292 |
| EaeI | YGGCCR | 2 cut(s) | 218, 1335 |
| EagI | CGGCCG | 1 cut(s) | 218 |
| Eam1104I | CTCTTC | 1 cut(s) | 945 |
| EarI | CTCTTC | 1 cut(s) | 945 |
| EciI | GGCGGA | 1 cut(s) | 677 |
| EclXI | CGGCCG | 1 cut(s) | 218 |
| Eco24I | GRGCYC | 1 cut(s) | 837 |
| Eco31I | GGTCTC | 3 cut(s) | 278, 398, 989 |
| Eco47I | GGWCC | 3 cut(s) | 1075, 1257, 1462 |
| Eco52I | CGGCCG | 1 cut(s) | 218 |
| Eco57I | CTGAAG | 2 cut(s) | 867, 969 |
| Eco72I | CACGTG | 2 cut(s) | 1226, 1235 |
| Eco88I | CYCGRG | 1 cut(s) | 1324 |
| EcoRII | CCWGG | 2 cut(s) | 28, 1387 |
| EcoT38I | GRGCYC | 1 cut(s) | 837 |
| Esp3I | CGTCTC | 2 cut(s) | 881, 977 |
| FaeI | CATG | 5 cut(s) | 11, 80, 110, 841, 1075 |
| FaqI | GGGAC | 1 cut(s) | 1328 |
| FatI | CATG | 5 cut(s) | 7, 76, 106, 837, 1071 |
| FblI | GTMKAC | 2 cut(s) | 779, 1437 |
| FokI | GGATG | 3 cut(s) | 371, 458, 1185 |
| FriOI | GRGCYC | 1 cut(s) | 837 |
| FspBI | CTAG | 1 cut(s) | 1011 |
| GlaI | GCGC | 2 cut(s) | 1322, 1430 |
| GsaI | CCCAGC | 1 cut(s) | 237 |
| GsuI | CTGGAG | 2 cut(s) | 201, 212 |
| HapII | CCGG | 6 cut(s) | 63, 221, 408, 597, 1325, 1446 |
| HhaI | GCGC | 2 cut(s) | 1323, 1431 |
| Hin1II | CATG | 5 cut(s) | 11, 80, 110, 841, 1075 |
| Hin6I | GCGC | 2 cut(s) | 1321, 1429 |
| HinP1I | GCGC | 2 cut(s) | 1321, 1429 |
| HinfI | GANTC | 4 cut(s) | 293, 1195, 1220, 1264 |
| HpaII | CCGG | 6 cut(s) | 63, 221, 408, 597, 1325, 1446 |
| HphI | GGTGA | 3 cut(s) | 265, 611, 1004 |
| Hpy166II | GTNNAC | 6 cut(s) | 474, 540, 606, 780, 1438, 1462 |
| Hpy188I | TCNGA | 5 cut(s) | 118, 139, 492, 886, 1357 |
| Hpy188III | TCNNGA | 2 cut(s) | 838, 1183 |
| Hpy8I | GTNNAC | 6 cut(s) | 474, 540, 606, 780, 1438, 1462 |
| HpyCH4III | ACNGT | 6 cut(s) | 520, 586, 652, 817, 901, 1079 |
| HpyCH4IV | ACGT | 3 cut(s) | 986, 1225, 1234 |
| HpyCH4V | TGCA | 6 cut(s) | 13, 80, 122, 1118, 1133, 1232 |
| HpySE526I | ACGT | 3 cut(s) | 986, 1225, 1234 |
| Hsp92II | CATG | 5 cut(s) | 11, 80, 110, 841, 1075 |
| HspAI | GCGC | 2 cut(s) | 1321, 1429 |
| KroI | GCCGGC | 1 cut(s) | 220 |
| KroNI | GCCGGC | 1 cut(s) | 222 |
| KspI | CCGCGG | 2 cut(s) | 213, 1341 |
| Kzo9I | GATC | 1 cut(s) | 1384 |
| LmnI | GCTCC | 3 cut(s) | 73, 1027, 1423 |
| LweI | GCATC | 6 cut(s) | 109, 163, 349, 436, 1165, 1317 |
| MaeI | CTAG | 1 cut(s) | 1011 |
| MaeII | ACGT | 3 cut(s) | 986, 1225, 1234 |
| MaeIII | GTNAC | 2 cut(s) | 58, 1221 |
| MalI | GATC | 1 cut(s) | 1386 |
| MbiI | CCGCTC | 1 cut(s) | 1426 |
| MboI | GATC | 1 cut(s) | 1384 |
| MboII | GAAGA | 4 cut(s) | 253, 875, 955, 962 |
| MhlI | GDGCHC | 2 cut(s) | 837, 1130 |
| MluCI | AATT | 3 cut(s) | 544, 676, 841 |
| MlyI | GAGTC | 4 cut(s) | 302, 1189, 1229, 1258 |
| MmeI | TCCRAC | 1 cut(s) | 1226 |
| MroNI | GCCGGC | 1 cut(s) | 220 |
| MseI | TTAA | 2 cut(s) | 153, 1347 |
| MslI | CAYNNNNRTG | 3 cut(s) | 584, 650, 815 |
| MspA1I | CMGCKG | 5 cut(s) | 212, 365, 773, 785, 1340 |
| MspCI | CTTAAG | 2 cut(s) | 152, 1346 |
| MspI | CCGG | 6 cut(s) | 63, 221, 408, 597, 1325, 1446 |
| MspR9I | CCNGG | 4 cut(s) | 30, 1325, 1326, 1389 |
| MvaI | CCWGG | 2 cut(s) | 30, 1389 |
| MvnI | CGCG | 5 cut(s) | 212, 1092, 1321, 1340, 1431 |
| NaeI | GCCGGC | 1 cut(s) | 222 |
| NciI | CCSGG | 2 cut(s) | 1325, 1326 |
| NdeII | GATC | 1 cut(s) | 1384 |
| NgoMIV | GCCGGC | 1 cut(s) | 220 |
| NlaIII | CATG | 5 cut(s) | 11, 80, 110, 841, 1075 |
| NlaIV | GGNNCC | 2 cut(s) | 553, 637 |
| NmeAIII | GCCGAG | 5 cut(s) | 196, 427, 580, 646, 985 |
| NmuCI | GTSAC | 2 cut(s) | 58, 1221 |
| NspI | RCATGY | 1 cut(s) | 80 |
| OliI | CACNNNNGTG | 3 cut(s) | 584, 650, 815 |
| PaeI | GCATGC | 1 cut(s) | 80 |
| PagI | TCATGA | 1 cut(s) | 837 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 428, 1231 |
| PdiI | GCCGGC | 1 cut(s) | 222 |
| PleI | GAGTC | 4 cut(s) | 301, 1189, 1228, 1258 |
| PmaCI | CACGTG | 2 cut(s) | 1226, 1235 |
| PmlI | CACGTG | 2 cut(s) | 1226, 1235 |
| PpsI | GAGTC | 4 cut(s) | 301, 1189, 1228, 1258 |
| Ppu21I | YACGTR | 2 cut(s) | 1226, 1235 |
| Psp6I | CCWGG | 2 cut(s) | 28, 1387 |
| PspCI | CACGTG | 2 cut(s) | 1226, 1235 |
| PspFI | CCCAGC | 1 cut(s) | 233 |
| PspGI | CCWGG | 2 cut(s) | 28, 1387 |
| PspN4I | GGNNCC | 2 cut(s) | 553, 637 |
| PspPI | GGNCC | 5 cut(s) | 552, 636, 1075, 1257, 1462 |
| PstI | CTGCAG | 2 cut(s) | 1120, 1135 |
| PvuII | CAGCTG | 1 cut(s) | 785 |
| RsaI | GTAC | 7 cut(s) | 473, 539, 605, 671, 1114, 1249, 1284 |
| RsaNI | GTAC | 7 cut(s) | 472, 538, 604, 670, 1113, 1248, 1283 |
| RseI | CAYNNNNRTG | 3 cut(s) | 584, 650, 815 |
| SacII | CCGCGG | 2 cut(s) | 213, 1341 |
| SaqAI | TTAA | 2 cut(s) | 153, 1347 |
| Sau3AI | GATC | 1 cut(s) | 1384 |
| Sau96I | GGNCC | 5 cut(s) | 552, 636, 1075, 1257, 1462 |
| SchI | GAGTC | 4 cut(s) | 302, 1189, 1229, 1258 |
| ScrFI | CCNGG | 4 cut(s) | 30, 1325, 1326, 1389 |
| SduI | GDGCHC | 2 cut(s) | 837, 1130 |
| SfaNI | GCATC | 6 cut(s) | 109, 163, 349, 436, 1165, 1317 |
| SfcI | CTRYAG | 3 cut(s) | 582, 1116, 1131 |
| SfiI | GGCCNNNNNGGCC | 2 cut(s) | 350, 503 |
| Sfr303I | CCGCGG | 2 cut(s) | 213, 1341 |
| SgrBI | CCGCGG | 2 cut(s) | 213, 1341 |
| SinI | GGWCC | 3 cut(s) | 1075, 1257, 1462 |
| SmaI | CCCGGG | 1 cut(s) | 1326 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 584, 650, 815 |
| SmlI | CTYRAG | 2 cut(s) | 152, 1346 |
| SmoI | CTYRAG | 2 cut(s) | 152, 1346 |
| SphI | GCATGC | 1 cut(s) | 80 |
| Sse9I | AATT | 3 cut(s) | 544, 676, 841 |
| SspMI | CTAG | 1 cut(s) | 1011 |
| StyD4I | CCNGG | 4 cut(s) | 28, 1323, 1324, 1387 |
| TaaI | ACNGT | 6 cut(s) | 520, 586, 652, 817, 901, 1079 |
| TaiI | ACGT | 3 cut(s) | 989, 1228, 1237 |
| TasI | AATT | 3 cut(s) | 544, 676, 841 |
| TatI | WGTACW | 4 cut(s) | 471, 537, 603, 669 |
| TauI | GCSGC | 8 cut(s) | 179, 212, 215, 365, 935, 1340, 1343, 1429 |
| Tru1I | TTAA | 2 cut(s) | 153, 1347 |
| Tru9I | TTAA | 2 cut(s) | 153, 1347 |
| TscAI | CASTG | 5 cut(s) | 268, 490, 591, 1135, 1474 |
| TseFI | GTSAC | 2 cut(s) | 58, 1221 |
| Tsp45I | GTSAC | 2 cut(s) | 58, 1221 |
| TspDTI | ATGAA | 2 cut(s) | 854, 1068 |
| TspGWI | ACGGA | 2 cut(s) | 437, 491 |
| TspMI | CCCGGG | 1 cut(s) | 1324 |
| TspRI | CASTG | 5 cut(s) | 268, 490, 591, 1135, 1474 |
| Vha464I | CTTAAG | 2 cut(s) | 152, 1346 |
| VpaK11BI | GGWCC | 3 cut(s) | 1075, 1257, 1462 |
| XceI | RCATGY | 1 cut(s) | 80 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 985 |
| XmaI | CCCGGG | 1 cut(s) | 1324 |
| XmiI | GTMKAC | 2 cut(s) | 779, 1437 |
| XspI | CTAG | 1 cut(s) | 1011 |