Rmu_sc0005631.1_g000008

Embryonic protein DC-8-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005631.1
Physical Location & Seq
Forward (+)
33794 .. 35526
1733 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005631.1_g000008.1.cds

Sequence Viewer

Length: 1629 bp
atggcgtcgtcgaagcagttcaaggaggagagagctgaggcagaagcgaggaaaaccgcgcttgatctgaaagatgggaacagagaaagagagtacgaaacagctggggtgaagacggacagggacatgtacggccagccaagagaaccatcccatgtgcaacaagaagcgaagcctggtgttattgggtctgtttttagggctgtgaccggcacattggagcatgcaaaggaggctgttgtgggcaaaagccatgacacttctgatgcagcaagagagcgttcggaatacaccacacttaaggcgaaggaaacgactgatgcggctggagagaagctggaggagtataaggaggccgcggctcggccggcgaaggaggctggggagaagacgaaggaggtgaaggacactgctgcggagaaggccaaagagaccaaggagtctgccaaggggaaggggagtgagtatgcggattacacttcgcagaaggccaaggaggccaaggatgccgctgcggagaaggctaagcagacgaaagactatgttgccgagaccggaagtgaggctacggagaaggcgaaagagacaaaggatgctgcgatgaggaaggctgaggagtacacggattacactgctcagaaggccaaggaggccaaggataccacagtagggaaggctaaagagtacaccaattatggggccgagaaggcagaggaggccaaggacactacagtggggaaggccggtgagtacacgaactatgctgccgagaaggcaaagggggccaaggacactacggtggggaaggcggaggagtacaagaattacaccgcagaaaaggcaaaggagactgcggaggccaccaaagaaaaggcaaaagagactgcggaggcagccaaagacaagactaaagagacagcggagtatacagctgagaaagcaaaagaagggaaggacactactgcgagcaagttgggtgggctcatgaattacttgactggtaagaaagaagaaaccaaacagaaggcttcagagacggctgagactgtcaaagagaacactaaacaggtggctgaggcggcgagggagaagactgaagagactgccgaggcaactgaaaaaaccaaggagacgttgggtgagaccaaggaggaagctaggagaaagatggaggagctgaggctaagggagaaaggttatgaagcgagagcaggagacatggaccgtgatgacgaccgcgagattgaggcagctaagggtactgcagctaagggcactgcagcaaagagcaacatttttagctcacttgggagtgtgagtgatgccatcaagagcaagctgactcatccaaccaatgtggtggaggagtcacgtgctgcacgtgaggaggggagtacggggaggaccaagactcctgctatggtagatgtacctgtggagaaggtggagattggcatcagggacacgcgcccgggggctgtggccgcggcacttaagaagtctgaccagatgtttggtcaaactttcaacgatcctggtagtatgcgagatgagggcaaggtggttatggagcggcgcgtggtagacgaagccggaaatgtgcgtgtggaccgcagtggcaagatgtga

Protein Analysis

542

Amino Acids

59.1

Weight (kDa)

5.94

Isoelectric Point (pI)

21.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012043)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 439
AccBSI CCGCTC 1 cut(s) 1573
AccI GTMKAC 2 cut(s) 926, 1584
AccII CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
AclWI GGATC 1 cut(s) 1526
AcoI YGGCCR 3 cut(s) 133, 365, 1482
AcuI CTGAAG 2 cut(s) 1014, 1116
AcvI CACGTG 2 cut(s) 1373, 1382
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 9 cut(s) 95, 131, 620, 686, 752, 818, 1261, 1396, 1431
AfiI CCNNNNNNNGG 3 cut(s) 363, 669, 696
AflII CTTAAG 2 cut(s) 299, 1493
AflIII ACRYGT 1 cut(s) 126
AgsI TTSAA 2 cut(s) 22, 1528
AjnI CCWGG 2 cut(s) 175, 1534
AleI CACNNNNGTG 2 cut(s) 731, 797
AlwI GGATC 1 cut(s) 1526
Ama87I CYCGRG 1 cut(s) 1471
ArsI GACNNNNNNTTYG 2 cut(s) 1496, 1528
Asp700I GAANNNNTTC 1 cut(s) 17
AspLEI GCGC 3 cut(s) 61, 1470, 1578
AspS9I GGNCC 5 cut(s) 699, 783, 1222, 1404, 1609
AsuC2I CCSGG 2 cut(s) 1472, 1473
AsuHPI GGTGA 4 cut(s) 121, 412, 758, 1151
AvaI CYCGRG 1 cut(s) 1471
AvaII GGWCC 3 cut(s) 1222, 1404, 1609
BaeGI GKGCMC 1 cut(s) 1277
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BanII GRGCYC 1 cut(s) 984
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbrPI CACGTG 2 cut(s) 1373, 1382
BbsI GAAGAC 3 cut(s) 119, 395, 1097
BbvCI CCTCAGC 4 cut(s) 36, 612, 1074, 1178
BccI CCATC 4 cut(s) 68, 157, 1162, 1334
BceAI ACGGC 2 cut(s) 148, 1053
BciT130I CCWGG 2 cut(s) 177, 1536
BciVI GTATCC 1 cut(s) 652
BcnI CCSGG 2 cut(s) 1472, 1473
BfaI CTAG 1 cut(s) 1158
BfmI CTRYAG 3 cut(s) 729, 1263, 1278
BfrI CTTAAG 2 cut(s) 299, 1493
BfuI GTATCC 1 cut(s) 652
BglI GCCNNNNNGGC 4 cut(s) 497, 650, 707, 773
BlpI GCTNAGC 1 cut(s) 525
Bme1390I CCNGG 4 cut(s) 177, 1472, 1473, 1536
Bme18I GGWCC 3 cut(s) 1222, 1404, 1609
BmeT110I CYCGRG 1 cut(s) 1471
BmgT120I GGNCC 5 cut(s) 699, 783, 1222, 1404, 1609
BmiI GGNNCC 2 cut(s) 700, 784
BmrFI CCNGG 4 cut(s) 177, 1472, 1473, 1536
BmsI GCATC 6 cut(s) 256, 310, 496, 583, 1312, 1464
BpiI GAAGAC 3 cut(s) 119, 395, 1097
BpmI CTGGAG 2 cut(s) 348, 359
Bpu10I CCTNAGC 7 cut(s) 36, 612, 1074, 1178, 1184, 1254, 1269
Bpu1102I GCTNAGC 1 cut(s) 525
BpuMI CCSGG 2 cut(s) 1472, 1473
BsaAI YACGTR 2 cut(s) 1373, 1382
BsaBI GATNNNNATC 1 cut(s) 1454
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 3 cut(s) 425, 545, 1136
BsaWI WCCGGW 1 cut(s) 554
BsaXI ACNNNNNCTCC 4 cut(s) 1303, 1333, 1396, 1426
Bsc4I CCNNNNNNNGG 3 cut(s) 363, 669, 696
Bse118I RCCGGY 3 cut(s) 209, 367, 743
Bse1I ACTGG 1 cut(s) 1003
Bse8I GATNNNNATC 1 cut(s) 1454
BseBI CCWGG 2 cut(s) 177, 1536
BseGI GGATG 4 cut(s) 149, 511, 598, 1345
BseJI GATNNNNATC 1 cut(s) 1454
BseLI CCNNNNNNNGG 3 cut(s) 363, 669, 696
BseMII CTCAG 7 cut(s) 27, 603, 650, 924, 1032, 1065, 1169
BseNI ACTGG 1 cut(s) 1003
BseRI GAGGAG 8 cut(s) 41, 356, 629, 728, 827, 1187, 1379, 1400
BseSI GKGCMC 1 cut(s) 1277
BseX3I CGGCCG 1 cut(s) 365
BseYI CCCAGC 2 cut(s) 104, 380
BsgI GTGCAG 1 cut(s) 1362
Bsh1236I CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
Bsh1285I CGRYCG 2 cut(s) 368, 1237
BsiEI CGRYCG 2 cut(s) 368, 1237
BsiHKCI CYCGRG 1 cut(s) 1471
BsiSI CCGG 6 cut(s) 210, 368, 555, 744, 1472, 1593
BslFI GGGAC 2 cut(s) 137, 1475
BslI CCNNNNNNNGG 3 cut(s) 363, 669, 696
BsmBI CGTCTC 2 cut(s) 1028, 1124
BsmFI GGGAC 2 cut(s) 137, 1475
Bso31I GGTCTC 3 cut(s) 425, 545, 1136
BsoBI CYCGRG 1 cut(s) 1471
Bsp1286I GDGCHC 2 cut(s) 984, 1277
Bsp143I GATC 2 cut(s) 64, 1531
Bsp1720I GCTNAGC 1 cut(s) 525
BspCNI CTCAG 7 cut(s) 28, 604, 649, 925, 1033, 1066, 1170
BspFNI CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
BspHI TCATGA 1 cut(s) 984
BspLI GGNNCC 2 cut(s) 700, 784
BspMAI CTGCAG 2 cut(s) 1267, 1282
BspPI GGATC 1 cut(s) 1526
BspTI CTTAAG 2 cut(s) 299, 1493
BspTNI GGTCTC 3 cut(s) 425, 545, 1136
BsrBI CCGCTC 1 cut(s) 1573
BsrFI RCCGGY 3 cut(s) 209, 367, 743
BsrI ACTGG 1 cut(s) 1003
BssAI RCCGGY 3 cut(s) 209, 367, 743
BssMI GATC 2 cut(s) 64, 1531
BssNAI GTATAC 1 cut(s) 927
BssNI GRCGYC 1 cut(s) 5
Bst1107I GTATAC 1 cut(s) 927
Bst2UI CCWGG 2 cut(s) 177, 1536
Bst4CI ACNGT 5 cut(s) 667, 733, 799, 1048, 1226
Bst6I CTCTTC 1 cut(s) 1092
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 299, 1493
BstBAI YACGTR 2 cut(s) 1373, 1382
BstC8I GCNNGC 5 cut(s) 137, 225, 369, 967, 1337
BstDSI CCRYGG 2 cut(s) 357, 1485
BstF5I GGATG 4 cut(s) 149, 511, 598, 1345
BstFNI CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
BstHHI GCGC 3 cut(s) 61, 1470, 1578
BstKTI GATC 2 cut(s) 67, 1534
BstMBI GATC 2 cut(s) 64, 1531
BstMCI CGRYCG 2 cut(s) 368, 1237
BstNI CCWGG 2 cut(s) 177, 1536
BstNSI RCATGY 2 cut(s) 130, 227
BstSCI CCNGG 4 cut(s) 175, 1470, 1471, 1534
BstSFI CTRYAG 3 cut(s) 729, 1263, 1278
BstSLI GKGCMC 1 cut(s) 1277
BstUI CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
BstV2I GAAGAC 3 cut(s) 119, 395, 1097
BstXI CCANNNNNNTGG 2 cut(s) 1360, 1514
BstZ17I GTATAC 1 cut(s) 927
BstZI CGGCCG 1 cut(s) 365
BsuI GTATCC 1 cut(s) 652
BtgI CCRYGG 2 cut(s) 357, 1485
BtgZI GCGATG 1 cut(s) 614
BtsCI GGATG 4 cut(s) 149, 511, 598, 1345
BtsI GCAGTG 4 cut(s) 408, 630, 1275, 1621
BtsIMutI CAGTG 5 cut(s) 408, 630, 738, 1275, 1621
Cac8I GCNNGC 5 cut(s) 137, 225, 369, 967, 1337
CciI TCATGA 1 cut(s) 984
CfoI GCGC 3 cut(s) 61, 1470, 1578
Cfr10I RCCGGY 3 cut(s) 209, 367, 743
Cfr13I GGNCC 5 cut(s) 699, 783, 1222, 1404, 1609
Cfr42I CCGCGG 2 cut(s) 360, 1488
Cfr9I CCCGGG 1 cut(s) 1471
Csp6I GTAC 9 cut(s) 94, 130, 619, 685, 751, 817, 1260, 1395, 1430
CspCI CAANNNNNGTGG 4 cut(s) 958, 993, 1338, 1373
CviAII CATG 6 cut(s) 127, 155, 224, 254, 985, 1219
CviQI GTAC 9 cut(s) 94, 130, 619, 685, 751, 817, 1260, 1395, 1430
DpnI GATC 2 cut(s) 66, 1533
DpnII GATC 2 cut(s) 64, 1531
DrdI GACNNNNNNGTC 1 cut(s) 439
DseDI GACNNNNNNGTC 1 cut(s) 439
EaeI YGGCCR 3 cut(s) 133, 365, 1482
EagI CGGCCG 1 cut(s) 365
Eam1104I CTCTTC 1 cut(s) 1092
EarI CTCTTC 1 cut(s) 1092
EciI GGCGGA 1 cut(s) 824
EclXI CGGCCG 1 cut(s) 365
Eco24I GRGCYC 1 cut(s) 984
Eco31I GGTCTC 3 cut(s) 425, 545, 1136
Eco47I GGWCC 3 cut(s) 1222, 1404, 1609
Eco52I CGGCCG 1 cut(s) 365
Eco57I CTGAAG 2 cut(s) 1014, 1116
Eco72I CACGTG 2 cut(s) 1373, 1382
Eco88I CYCGRG 1 cut(s) 1471
EcoRII CCWGG 2 cut(s) 175, 1534
EcoT38I GRGCYC 1 cut(s) 984
Esp3I CGTCTC 2 cut(s) 1028, 1124
FaeI CATG 6 cut(s) 130, 158, 227, 257, 988, 1222
FaqI GGGAC 2 cut(s) 137, 1475
FatI CATG 6 cut(s) 126, 154, 223, 253, 984, 1218
FblI GTMKAC 2 cut(s) 926, 1584
FokI GGATG 4 cut(s) 136, 518, 605, 1332
FriOI GRGCYC 1 cut(s) 984
FspBI CTAG 1 cut(s) 1158
GlaI GCGC 3 cut(s) 60, 1469, 1577
GsaI CCCAGC 2 cut(s) 108, 384
GsuI CTGGAG 2 cut(s) 348, 359
HapII CCGG 6 cut(s) 210, 368, 555, 744, 1472, 1593
HhaI GCGC 3 cut(s) 61, 1470, 1578
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 130, 158, 227, 257, 988, 1222
Hin6I GCGC 3 cut(s) 59, 1468, 1576
HinP1I GCGC 3 cut(s) 59, 1468, 1576
HinfI GANTC 4 cut(s) 440, 1342, 1367, 1411
HpaII CCGG 6 cut(s) 210, 368, 555, 744, 1472, 1593
HphI GGTGA 4 cut(s) 121, 412, 758, 1151
Hpy166II GTNNAC 6 cut(s) 621, 687, 753, 927, 1585, 1609
Hpy188I TCNGA 6 cut(s) 69, 265, 286, 639, 1033, 1504
Hpy188III TCNNGA 2 cut(s) 985, 1330
Hpy8I GTNNAC 6 cut(s) 621, 687, 753, 927, 1585, 1609
Hpy99I CGWCG 2 cut(s) 10, 13
HpyCH4III ACNGT 5 cut(s) 667, 733, 799, 1048, 1226
HpyCH4IV ACGT 3 cut(s) 1133, 1372, 1381
HpyCH4V TGCA 6 cut(s) 160, 227, 269, 1265, 1280, 1379
HpySE526I ACGT 3 cut(s) 1133, 1372, 1381
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 130, 158, 227, 257, 988, 1222
HspAI GCGC 3 cut(s) 59, 1468, 1576
KroI GCCGGC 1 cut(s) 367
KroNI GCCGGC 1 cut(s) 369
KspI CCGCGG 2 cut(s) 360, 1488
Kzo9I GATC 2 cut(s) 64, 1531
LmnI GCTCC 3 cut(s) 220, 1174, 1570
LweI GCATC 6 cut(s) 256, 310, 496, 583, 1312, 1464
MaeI CTAG 1 cut(s) 1158
MaeII ACGT 3 cut(s) 1133, 1372, 1381
MaeIII GTNAC 2 cut(s) 205, 1368
MalI GATC 2 cut(s) 66, 1533
MbiI CCGCTC 1 cut(s) 1573
MboI GATC 2 cut(s) 64, 1531
MboII GAAGA 5 cut(s) 124, 400, 1022, 1102, 1109
MhlI GDGCHC 2 cut(s) 984, 1277
MluCI AATT 3 cut(s) 691, 823, 988
MlyI GAGTC 4 cut(s) 449, 1336, 1376, 1405
MmeI TCCRAC 1 cut(s) 1373
MroNI GCCGGC 1 cut(s) 367
MroXI GAANNNNTTC 1 cut(s) 17
MseI TTAA 2 cut(s) 300, 1494
MslI CAYNNNNRTG 2 cut(s) 731, 797
MspA1I CMGCKG 6 cut(s) 104, 359, 512, 920, 932, 1487
MspCI CTTAAG 2 cut(s) 299, 1493
MspI CCGG 6 cut(s) 210, 368, 555, 744, 1472, 1593
MspR9I CCNGG 4 cut(s) 177, 1472, 1473, 1536
MvaI CCWGG 2 cut(s) 177, 1536
MvnI CGCG 6 cut(s) 59, 359, 1239, 1468, 1487, 1578
NaeI GCCGGC 1 cut(s) 369
NciI CCSGG 2 cut(s) 1472, 1473
NdeII GATC 2 cut(s) 64, 1531
NgoMIV GCCGGC 1 cut(s) 367
NlaIII CATG 6 cut(s) 130, 158, 227, 257, 988, 1222
NlaIV GGNNCC 2 cut(s) 700, 784
NmeAIII GCCGAG 5 cut(s) 343, 574, 727, 793, 1132
NmuCI GTSAC 2 cut(s) 205, 1368
NspI RCATGY 2 cut(s) 130, 227
OliI CACNNNNGTG 2 cut(s) 731, 797
PaeI GCATGC 1 cut(s) 227
PagI TCATGA 1 cut(s) 984
PciI ACATGT 1 cut(s) 126
PcsI WCGNNNNNNNCGW 2 cut(s) 575, 1378
PdiI GCCGGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 17
PleI GAGTC 4 cut(s) 448, 1336, 1375, 1405
PmaCI CACGTG 2 cut(s) 1373, 1382
PmlI CACGTG 2 cut(s) 1373, 1382
PpsI GAGTC 4 cut(s) 448, 1336, 1375, 1405
Ppu21I YACGTR 2 cut(s) 1373, 1382
PscI ACATGT 1 cut(s) 126
Psp6I CCWGG 2 cut(s) 175, 1534
PspCI CACGTG 2 cut(s) 1373, 1382
PspFI CCCAGC 2 cut(s) 104, 380
PspGI CCWGG 2 cut(s) 175, 1534
PspN4I GGNNCC 2 cut(s) 700, 784
PspPI GGNCC 5 cut(s) 699, 783, 1222, 1404, 1609
PstI CTGCAG 2 cut(s) 1267, 1282
PvuII CAGCTG 2 cut(s) 104, 932
RsaI GTAC 9 cut(s) 95, 131, 620, 686, 752, 818, 1261, 1396, 1431
RsaNI GTAC 9 cut(s) 94, 130, 619, 685, 751, 817, 1260, 1395, 1430
RseI CAYNNNNRTG 2 cut(s) 731, 797
SacII CCGCGG 2 cut(s) 360, 1488
SaqAI TTAA 2 cut(s) 300, 1494
Sau3AI GATC 2 cut(s) 64, 1531
Sau96I GGNCC 5 cut(s) 699, 783, 1222, 1404, 1609
SchI GAGTC 4 cut(s) 449, 1336, 1376, 1405
ScrFI CCNGG 4 cut(s) 177, 1472, 1473, 1536
SduI GDGCHC 2 cut(s) 984, 1277
SfaNI GCATC 6 cut(s) 256, 310, 496, 583, 1312, 1464
SfcI CTRYAG 3 cut(s) 729, 1263, 1278
SfiI GGCCNNNNNGGCC 2 cut(s) 497, 650
Sfr303I CCGCGG 2 cut(s) 360, 1488
SgrBI CCGCGG 2 cut(s) 360, 1488
SinI GGWCC 3 cut(s) 1222, 1404, 1609
SmaI CCCGGG 1 cut(s) 1473
SmiMI CAYNNNNRTG 2 cut(s) 731, 797
SmlI CTYRAG 2 cut(s) 299, 1493
SmoI CTYRAG 2 cut(s) 299, 1493
SphI GCATGC 1 cut(s) 227
Sse9I AATT 3 cut(s) 691, 823, 988
SspMI CTAG 1 cut(s) 1158
StyD4I CCNGG 4 cut(s) 175, 1470, 1471, 1534
TaaI ACNGT 5 cut(s) 667, 733, 799, 1048, 1226
TaiI ACGT 3 cut(s) 1136, 1375, 1384
TaqI TCGA 1 cut(s) 11
TasI AATT 3 cut(s) 691, 823, 988
TatI WGTACW 4 cut(s) 618, 684, 750, 816
TauI GCSGC 8 cut(s) 326, 359, 362, 512, 1082, 1487, 1490, 1576
Tru1I TTAA 2 cut(s) 300, 1494
Tru9I TTAA 2 cut(s) 300, 1494
TscAI CASTG 5 cut(s) 415, 637, 738, 1282, 1621
TseFI GTSAC 2 cut(s) 205, 1368
Tsp45I GTSAC 2 cut(s) 205, 1368
TspDTI ATGAA 2 cut(s) 1001, 1215
TspGWI ACGGA 3 cut(s) 131, 584, 638
TspMI CCCGGG 1 cut(s) 1471
TspRI CASTG 5 cut(s) 415, 637, 738, 1282, 1621
Vha464I CTTAAG 2 cut(s) 299, 1493
VpaK11BI GGWCC 3 cut(s) 1222, 1404, 1609
XceI RCATGY 2 cut(s) 130, 227
XcmI CCANNNNNNNNNTGG 1 cut(s) 1132
XmaI CCCGGG 1 cut(s) 1471
XmiI GTMKAC 2 cut(s) 926, 1584
XmnI GAANNNNTTC 1 cut(s) 17
XspI CTAG 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.