Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0012043

Physical Location & Seq

Genomic Coordinates Reverse (-)

32193829 .. 32195603

Gene Structure 1775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00409690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCGTCATCGAAGCAGTTCAAGGAGGAGAGAGCTGAGGCAGAAGCGAGGAAAGCCGCGCTTGATCTGAAAGATGGGAACAGAGAAAGAGAGTACGAAACAGCTGGGGTGAAGATGGACAGGGACATGTACGGCCAGCCAAGAGAGCCATCCCATGTGCAACAAGAAGCGAAGCCTGGTGTTATTGGGACGCTGTTGTGGGCAAAAGCCACGACACTTATGATGCAGCAAGGGAGCGTTCGGAATACACCACACTTAAGGCGAAGGAAACGACTGATGCGGCTGGAGAGAAGCTGGAGGAGTATAAGGAGGCCGCGGCTCGGCCGGCCGGCGAAGGAGGCTGCGGAGAAGACGAAGGAGGTGAAGGACACTGCTGCGGAGAAGGCCAAAGAGACCAAGGAGTCTTCCAAGGGGAAGGGGAGTGAGTATGAAGATTACACTTCGCAGAAGGCGAAAAAGGCCAAGGATGCCGCGGGGGATAAGGCTAAGCAGACGAAAGACTATGTTGCCGAGACCGCAAGTGAGGCTACGGAGAAGACGAAAGAGACAAAGGATGCTGCGATGAGGAAGGCTGAGGAGTACACGGATTACACTGCTCAGAAGGCCAAGGAGGCCAAGGATACGACAGTAGGGAAGGCTAAAGAGTACACCAATTATGCGGCCGAGAAGGCAAAGGGGGCCAAGGACACTACAGTGGGGAAGGCCAGTGAGTACACGAACTATGCTGCCGAGAAGGCAAAGGGGGCCAAGGACACTACGGTGGGGAAGGCGGAGGAGTACAAGAATTACACGGCAGAAAAGGCAAAGGAGACTGCGGAGGCAACCAAAGAAAAGGCAAAGGAGACTGCGGAGGCAACCAAAGAAAAGCCAAAGGAGACTGCGGAGGCAGCCAAAGATAAGACTAAAGAGACAGGGGAGTATACAGCTGAGAAAGCAAAAGAAGGGAAGGACACTACTGTGAGCAAGTTAGGTGGGCTCATGAATTACTTGACTGGTAAGAAAGAAGAAACCAAACAGAAGGCTGCAGAGAGGGCTGAGACTGTCAAAGAGAACACTAAACAGCCGGCTGAGGCGGCAAAGGAGAAGACTGAAGAGACTGCCGAGGCAACCAAGCAGAAGATCAAAGAGGCAGCTGAAAAAACCAAGGATACGTTGGGTGAGACCGAGGAGGAAGCTAGGAGAAAGATGGAGAAGCTGAGGCTAAGGGAGAAAGGTTATGAAGCGAGAGCAGGAAACATGGACCGTGATGAGGACCGCGAAATTGAGGCAGCAAAGGGCACTGCAGCAAAGAGCAACATTTTCAGCTCACTTGGGAGTGTGAGTGATGCCATCAAGAGCAAGCTGACTCATCCAACCGATGTGGTGAAGGAGTCACGTGCTGCACGTGAGGAGGGGAGTACGGGGAGGACCAAGACTCCTGCTATGGTAGAGGTACCTGTGGAGAAGGTGGAGATTGACATCAGGGACACGCGCCCGGGGGCTGTGGCCGGGGCACTTAAGAAGTCTGACCAGATGTTTGGTCAAACTTTCAACGATCCTGGTAGTATGGGAGATGAGGGCAAGGTGGTTATGGAGCGGCGCGTGGTAGACGAAGCCGGAAATGTGCGTGTGGACCGCAGTGGCAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0009791 GO:0009838 GO:0009908 GO:0010227 GO:0022414 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LEA_4

Protein Analysis

543

Amino Acids

60.1

Weight (kDa)

9.24

Isoelectric Point (pI)

29.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LEA_4	PF02987	176 - 216	3e-13	Late embryogenesis abundant protein
LEA_4	PF02987	195 - 238	3.5e-16	Late embryogenesis abundant protein
LEA_4	PF02987	217 - 260	3.9e-15	Late embryogenesis abundant protein
LEA_4	PF02987	239 - 282	1.5e-10	Late embryogenesis abundant protein
LEA_4	PF02987	285 - 324	1.4e-06	Late embryogenesis abundant protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012043)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36640 AT2G36640 AT3G53040
fragaria_vesca	FvH4_6g17400
malus_domestica	MD09G1267600.v1.1
prunus_persica	Prupe.7G121500_v2.0.a1 Prupe.7G121500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0471651
rosa_laevigata	RLG00000024148
rosa_multiflora	Rmu_co8483845.1_g000001 Rmu_sc0005631.1_g000008
rosa_roxburghii	Rroxscaffold_6G00409690
rosa_rugosa	Rorug03G0118600
rosa_samantha	Rh3AG169800 Rh3BG195500 Rh3CG186200 Rh3CG195500 Rh3DG179500
rosa_wichuraiana	Rw0G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	400
Acc65I	GGTACC	1 cut(s)	1432
AccB1I	GGYRCC	1 cut(s)	1432
AccBSI	CCGCTC	1 cut(s)	1576
AccI	GTMKAC	2 cut(s)	920, 1587
AccII	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
AclWI	GGATC	1 cut(s)	1529
AcoI	YGGCCR	5 cut(s)	133, 322, 326, 660, 1485
AcuI	CTGAAG	1 cut(s)	1110
AcvI	CACGTG	2 cut(s)	1376, 1385
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	8 cut(s)	95, 131, 581, 647, 713, 779, 1399, 1434
AfiI	CCNNNNNNNGG	2 cut(s)	320, 1249
AflII	CTTAAG	2 cut(s)	256, 1496
AflIII	ACRYGT	1 cut(s)	126
AgsI	TTSAA	2 cut(s)	22, 1531
AjnI	CCWGG	2 cut(s)	175, 1537
AleI	CACNNNNGTG	3 cut(s)	692, 758, 956
AluBI	AGCT	9 cut(s)	35, 104, 294, 926, 1133, 1175, 1195, 1305, 1342
AluI	AGCT	9 cut(s)	35, 104, 294, 926, 1133, 1175, 1195, 1305, 1342
AlwI	GGATC	1 cut(s)	1529
Ama87I	CYCGRG	1 cut(s)	1474
ArsI	GACNNNNNNTTYG	2 cut(s)	1499, 1531
Asp700I	GAANNNNTTC	1 cut(s)	17
Asp718I	GGTACC	1 cut(s)	1432
AspLEI	GCGC	3 cut(s)	61, 1473, 1581
AspS9I	GGNCC	6 cut(s)	678, 744, 1240, 1252, 1407, 1612
AsuC2I	CCSGG	3 cut(s)	1475, 1476, 1489
AsuHPI	GGTGA	4 cut(s)	121, 373, 1169, 1375
AvaI	CYCGRG	1 cut(s)	1474
AvaII	GGWCC	4 cut(s)	1240, 1252, 1407, 1612
BaeGI	GKGCMC	2 cut(s)	1280, 1495
BaeI	ACNNNNGTAYC	2 cut(s)	612, 645
BanI	GGYRCC	1 cut(s)	1432
BanII	GRGCYC	1 cut(s)	978
BbrPI	CACGTG	2 cut(s)	1376, 1385
BbsI	GAAGAC	4 cut(s)	356, 396, 542, 1091
BbvCI	CCTCAGC	4 cut(s)	36, 573, 1068, 1196
BccI	CCATC	5 cut(s)	68, 109, 157, 1180, 1337
BceAI	ACGGC	2 cut(s)	148, 807
BciT130I	CCWGG	2 cut(s)	177, 1539
BciVI	GTATCC	2 cut(s)	613, 1141
BcnI	CCSGG	3 cut(s)	1475, 1476, 1489
BfaI	CTAG	1 cut(s)	1176
BfmI	CTRYAG	3 cut(s)	690, 1023, 1281
BfrI	CTTAAG	2 cut(s)	256, 1496
BfuI	GTATCC	2 cut(s)	613, 1141
BglI	GCCNNNNNGGC	3 cut(s)	611, 668, 734
BlpI	GCTNAGC	1 cut(s)	486
Bme1390I	CCNGG	5 cut(s)	177, 1475, 1476, 1489, 1539
Bme18I	GGWCC	4 cut(s)	1240, 1252, 1407, 1612
BmeT110I	CYCGRG	1 cut(s)	1474
BmgT120I	GGNCC	6 cut(s)	678, 744, 1240, 1252, 1407, 1612
BmiI	GGNNCC	3 cut(s)	679, 745, 1434
BmrFI	CCNGG	5 cut(s)	177, 1475, 1476, 1489, 1539
BmsI	GCATC	5 cut(s)	213, 267, 457, 544, 1315
BpiI	GAAGAC	4 cut(s)	356, 396, 542, 1091
BpmI	CTGGAG	2 cut(s)	305, 316
Bpu10I	CCTNAGC	5 cut(s)	36, 573, 1068, 1196, 1202
Bpu1102I	GCTNAGC	1 cut(s)	486
BpuMI	CCSGG	3 cut(s)	1475, 1476, 1489
BsaAI	YACGTR	2 cut(s)	1376, 1385
BsaBI	GATNNNNATC	1 cut(s)	1457
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	3 cut(s)	386, 506, 1154
BsaXI	ACNNNNNCTCC	4 cut(s)	1306, 1336, 1399, 1429
Bsc4I	CCNNNNNNNGG	2 cut(s)	320, 1249
Bse118I	RCCGGY	3 cut(s)	324, 328, 1063
Bse1I	ACTGG	2 cut(s)	705, 997
Bse8I	GATNNNNATC	1 cut(s)	1457
BseBI	CCWGG	2 cut(s)	177, 1539
BseGI	GGATG	4 cut(s)	149, 472, 559, 1348
BseJI	GATNNNNATC	1 cut(s)	1457
BseLI	CCNNNNNNNGG	2 cut(s)	320, 1249
BseMII	CTCAG	7 cut(s)	27, 564, 611, 918, 1026, 1059, 1187
BseNI	ACTGG	2 cut(s)	705, 997
BseRI	GAGGAG	6 cut(s)	41, 313, 590, 788, 1181, 1403
BseSI	GKGCMC	2 cut(s)	1280, 1495
BseX3I	CGGCCG	3 cut(s)	322, 326, 660
BseYI	CCCAGC	1 cut(s)	104
BsgI	GTGCAG	1 cut(s)	1365
Bsh1236I	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
Bsh1285I	CGRYCG	3 cut(s)	325, 329, 663
BshNI	GGYRCC	1 cut(s)	1432
BsiEI	CGRYCG	3 cut(s)	325, 329, 663
BsiHKCI	CYCGRG	1 cut(s)	1474
BsiSI	CCGG	6 cut(s)	325, 329, 1064, 1475, 1488, 1596
BslFI	GGGAC	3 cut(s)	137, 202, 1478
BslI	CCNNNNNNNGG	2 cut(s)	320, 1249
BsmFI	GGGAC	3 cut(s)	137, 202, 1478
Bso31I	GGTCTC	3 cut(s)	386, 506, 1154
BsoBI	CYCGRG	1 cut(s)	1474
Bsp1286I	GDGCHC	3 cut(s)	978, 1280, 1495
Bsp143I	GATC	3 cut(s)	64, 1119, 1534
Bsp1720I	GCTNAGC	1 cut(s)	486
BspCNI	CTCAG	7 cut(s)	28, 565, 610, 919, 1027, 1060, 1188
BspFNI	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
BspHI	TCATGA	1 cut(s)	978
BspLI	GGNNCC	3 cut(s)	679, 745, 1434
BspMAI	CTGCAG	2 cut(s)	1027, 1285
BspPI	GGATC	1 cut(s)	1529
BspT107I	GGYRCC	1 cut(s)	1432
BspTI	CTTAAG	2 cut(s)	256, 1496
BspTNI	GGTCTC	3 cut(s)	386, 506, 1154
BsrBI	CCGCTC	1 cut(s)	1576
BsrFI	RCCGGY	3 cut(s)	324, 328, 1063
BsrI	ACTGG	2 cut(s)	705, 997
BssAI	RCCGGY	3 cut(s)	324, 328, 1063
BssMI	GATC	3 cut(s)	64, 1119, 1534
BssNAI	GTATAC	1 cut(s)	921
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	8 cut(s)	396, 408, 462, 606, 615, 681, 747, 1143
Bst1107I	GTATAC	1 cut(s)	921
Bst2UI	CCWGG	2 cut(s)	177, 1539
Bst4CI	ACNGT	6 cut(s)	628, 694, 760, 958, 1042, 1244
Bst6I	CTCTTC	1 cut(s)	1086
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	2 cut(s)	256, 1496
BstBAI	YACGTR	2 cut(s)	1376, 1385
BstC8I	GCNNGC	5 cut(s)	137, 326, 330, 1065, 1340
BstDEI	CTNAG	9 cut(s)	36, 486, 573, 597, 927, 1035, 1068, 1196, 1202
BstDSI	CCRYGG	2 cut(s)	314, 471
BstF5I	GGATG	4 cut(s)	149, 472, 559, 1348
BstFNI	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
BstHHI	GCGC	3 cut(s)	61, 1473, 1581
BstKTI	GATC	3 cut(s)	67, 1122, 1537
BstMBI	GATC	3 cut(s)	64, 1119, 1534
BstMCI	CGRYCG	3 cut(s)	325, 329, 663
BstNI	CCWGG	2 cut(s)	177, 1539
BstNSI	RCATGY	1 cut(s)	130
BstSCI	CCNGG	5 cut(s)	175, 1473, 1474, 1487, 1537
BstSFI	CTRYAG	3 cut(s)	690, 1023, 1281
BstSLI	GKGCMC	2 cut(s)	1280, 1495
BstUI	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
BstV2I	GAAGAC	4 cut(s)	356, 396, 542, 1091
BstXI	CCANNNNNNTGG	1 cut(s)	1517
BstZ17I	GTATAC	1 cut(s)	921
BstZI	CGGCCG	3 cut(s)	322, 326, 660
BsuI	GTATCC	2 cut(s)	613, 1141
BtgI	CCRYGG	2 cut(s)	314, 471
BtgZI	GCGATG	1 cut(s)	575
BtsCI	GGATG	4 cut(s)	149, 472, 559, 1348
BtsI	GCAGTG	4 cut(s)	369, 591, 1278, 1624
BtsIMutI	CAGTG	6 cut(s)	369, 591, 699, 712, 1278, 1624
Cac8I	GCNNGC	5 cut(s)	137, 326, 330, 1065, 1340
CciI	TCATGA	1 cut(s)	978
CfoI	GCGC	3 cut(s)	61, 1473, 1581
Cfr10I	RCCGGY	3 cut(s)	324, 328, 1063
Cfr13I	GGNCC	6 cut(s)	678, 744, 1240, 1252, 1407, 1612
Cfr42I	CCGCGG	2 cut(s)	317, 474
Cfr9I	CCCGGG	1 cut(s)	1474
CseI	GACGC	1 cut(s)	199
Csp6I	GTAC	8 cut(s)	94, 130, 580, 646, 712, 778, 1398, 1433
CspCI	CAANNNNNGTGG	4 cut(s)	952, 987, 1341, 1376
CviAII	CATG	4 cut(s)	127, 155, 979, 1237
CviQI	GTAC	8 cut(s)	94, 130, 580, 646, 712, 778, 1398, 1433
DdeI	CTNAG	9 cut(s)	36, 486, 573, 597, 927, 1035, 1068, 1196, 1202
DpnI	GATC	3 cut(s)	66, 1121, 1536
DpnII	GATC	3 cut(s)	64, 1119, 1534
DrdI	GACNNNNNNGTC	1 cut(s)	400
DseDI	GACNNNNNNGTC	1 cut(s)	400
EaeI	YGGCCR	5 cut(s)	133, 322, 326, 660, 1485
EagI	CGGCCG	3 cut(s)	322, 326, 660
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
EciI	GGCGGA	1 cut(s)	785
EclXI	CGGCCG	3 cut(s)	322, 326, 660
Eco130I	CCWWGG	8 cut(s)	396, 408, 462, 606, 615, 681, 747, 1143
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	3 cut(s)	386, 506, 1154
Eco47I	GGWCC	4 cut(s)	1240, 1252, 1407, 1612
Eco52I	CGGCCG	3 cut(s)	322, 326, 660
Eco57I	CTGAAG	1 cut(s)	1110
Eco72I	CACGTG	2 cut(s)	1376, 1385
Eco88I	CYCGRG	1 cut(s)	1474
EcoRII	CCWGG	2 cut(s)	175, 1537
EcoT14I	CCWWGG	8 cut(s)	396, 408, 462, 606, 615, 681, 747, 1143
EcoT38I	GRGCYC	1 cut(s)	978
ErhI	CCWWGG	8 cut(s)	396, 408, 462, 606, 615, 681, 747, 1143
FaeI	CATG	4 cut(s)	130, 158, 982, 1240
FalI	AAGNNNNNCTT	2 cut(s)	45, 77
FaqI	GGGAC	3 cut(s)	137, 202, 1478
FatI	CATG	4 cut(s)	126, 154, 978, 1236
FauI	CCCGC	1 cut(s)	466
FblI	GTMKAC	2 cut(s)	920, 1587
FokI	GGATG	4 cut(s)	136, 479, 566, 1335
FriOI	GRGCYC	1 cut(s)	978
FseI	GGCCGGCC	1 cut(s)	328
FspBI	CTAG	1 cut(s)	1176
GlaI	GCGC	3 cut(s)	60, 1472, 1580
GsaI	CCCAGC	1 cut(s)	108
GsuI	CTGGAG	2 cut(s)	305, 316
HapII	CCGG	6 cut(s)	325, 329, 1064, 1475, 1488, 1596
HgaI	GACGC	1 cut(s)	199
HhaI	GCGC	3 cut(s)	61, 1473, 1581
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	130, 158, 982, 1240
Hin6I	GCGC	3 cut(s)	59, 1471, 1579
HinP1I	GCGC	3 cut(s)	59, 1471, 1579
HinfI	GANTC	4 cut(s)	401, 1345, 1370, 1414
HpaII	CCGG	6 cut(s)	325, 329, 1064, 1475, 1488, 1596
HphI	GGTGA	4 cut(s)	121, 373, 1169, 1375
Hpy166II	GTNNAC	6 cut(s)	582, 648, 714, 921, 1588, 1612
Hpy188I	TCNGA	4 cut(s)	69, 243, 600, 1507
Hpy188III	TCNNGA	2 cut(s)	979, 1333
Hpy8I	GTNNAC	6 cut(s)	582, 648, 714, 921, 1588, 1612
HpyCH4III	ACNGT	6 cut(s)	628, 694, 760, 958, 1042, 1244
HpyCH4IV	ACGT	3 cut(s)	1151, 1375, 1384
HpyCH4V	TGCA	5 cut(s)	160, 226, 1025, 1283, 1382
HpyF3I	CTNAG	9 cut(s)	36, 486, 573, 597, 927, 1035, 1068, 1196, 1202
HpySE526I	ACGT	3 cut(s)	1151, 1375, 1384
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	130, 158, 982, 1240
HspAI	GCGC	3 cut(s)	59, 1471, 1579
KpnI	GGTACC	1 cut(s)	1436
KroI	GCCGGC	3 cut(s)	324, 328, 1063
KroNI	GCCGGC	3 cut(s)	326, 330, 1065
KspI	CCGCGG	2 cut(s)	317, 474
Kzo9I	GATC	3 cut(s)	64, 1119, 1534
LmnI	GCTCC	2 cut(s)	234, 1573
LweI	GCATC	5 cut(s)	213, 267, 457, 544, 1315
MaeI	CTAG	1 cut(s)	1176
MaeII	ACGT	3 cut(s)	1151, 1375, 1384
MaeIII	GTNAC	1 cut(s)	1371
MalI	GATC	3 cut(s)	66, 1121, 1536
MbiI	CCGCTC	1 cut(s)	1576
MboI	GATC	3 cut(s)	64, 1119, 1534
MboII	GAAGA	9 cut(s)	124, 361, 396, 443, 547, 1016, 1096, 1103, 1129
MhlI	GDGCHC	3 cut(s)	978, 1280, 1495
MluCI	AATT	4 cut(s)	652, 784, 982, 1260
MlyI	GAGTC	4 cut(s)	410, 1339, 1379, 1408
MmeI	TCCRAC	1 cut(s)	1376
MroNI	GCCGGC	3 cut(s)	324, 328, 1063
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	2 cut(s)	257, 1497
MslI	CAYNNNNRTG	3 cut(s)	692, 758, 956
MspA1I	CMGCKG	5 cut(s)	104, 316, 473, 926, 1133
MspCI	CTTAAG	2 cut(s)	256, 1496
MspI	CCGG	6 cut(s)	325, 329, 1064, 1475, 1488, 1596
MspR9I	CCNGG	5 cut(s)	177, 1475, 1476, 1489, 1539
MvaI	CCWGG	2 cut(s)	177, 1539
MvnI	CGCG	6 cut(s)	59, 316, 473, 1257, 1471, 1581
NaeI	GCCGGC	3 cut(s)	326, 330, 1065
NciI	CCSGG	3 cut(s)	1475, 1476, 1489
NdeII	GATC	3 cut(s)	64, 1119, 1534
NgoMIV	GCCGGC	3 cut(s)	324, 328, 1063
NlaIII	CATG	4 cut(s)	130, 158, 982, 1240
NlaIV	GGNNCC	3 cut(s)	679, 745, 1434
NmeAIII	GCCGAG	5 cut(s)	300, 535, 688, 754, 1126
NmuCI	GTSAC	1 cut(s)	1371
NspI	RCATGY	1 cut(s)	130
OliI	CACNNNNGTG	3 cut(s)	692, 758, 956
PagI	TCATGA	1 cut(s)	978
PciI	ACATGT	1 cut(s)	126
PcsI	WCGNNNNNNNCGW	3 cut(s)	449, 536, 1381
PdiI	GCCGGC	3 cut(s)	326, 330, 1065
PdmI	GAANNNNTTC	1 cut(s)	17
PleI	GAGTC	4 cut(s)	409, 1339, 1378, 1408
PmaCI	CACGTG	2 cut(s)	1376, 1385
PmlI	CACGTG	2 cut(s)	1376, 1385
PpsI	GAGTC	4 cut(s)	409, 1339, 1378, 1408
Ppu21I	YACGTR	2 cut(s)	1376, 1385
PscI	ACATGT	1 cut(s)	126
Psp6I	CCWGG	2 cut(s)	175, 1537
PspCI	CACGTG	2 cut(s)	1376, 1385
PspFI	CCCAGC	1 cut(s)	104
PspGI	CCWGG	2 cut(s)	175, 1537
PspN4I	GGNNCC	3 cut(s)	679, 745, 1434
PspPI	GGNCC	6 cut(s)	678, 744, 1240, 1252, 1407, 1612
PstI	CTGCAG	2 cut(s)	1027, 1285
PvuII	CAGCTG	3 cut(s)	104, 926, 1133
RigI	GGCCGGCC	1 cut(s)	328
RsaI	GTAC	8 cut(s)	95, 131, 581, 647, 713, 779, 1399, 1434
RsaNI	GTAC	8 cut(s)	94, 130, 580, 646, 712, 778, 1398, 1433
RseI	CAYNNNNRTG	3 cut(s)	692, 758, 956
SacII	CCGCGG	2 cut(s)	317, 474
SaqAI	TTAA	2 cut(s)	257, 1497
Sau3AI	GATC	3 cut(s)	64, 1119, 1534
Sau96I	GGNCC	6 cut(s)	678, 744, 1240, 1252, 1407, 1612
SchI	GAGTC	4 cut(s)	410, 1339, 1379, 1408
ScrFI	CCNGG	5 cut(s)	177, 1475, 1476, 1489, 1539
SduI	GDGCHC	3 cut(s)	978, 1280, 1495
SfaNI	GCATC	5 cut(s)	213, 267, 457, 544, 1315
SfcI	CTRYAG	3 cut(s)	690, 1023, 1281
SfiI	GGCCNNNNNGGCC	1 cut(s)	611
Sfr303I	CCGCGG	2 cut(s)	317, 474
SgrBI	CCGCGG	2 cut(s)	317, 474
SinI	GGWCC	4 cut(s)	1240, 1252, 1407, 1612
SmaI	CCCGGG	1 cut(s)	1476
SmiMI	CAYNNNNRTG	3 cut(s)	692, 758, 956
SmlI	CTYRAG	2 cut(s)	256, 1496
SmoI	CTYRAG	2 cut(s)	256, 1496
Sse9I	AATT	4 cut(s)	652, 784, 982, 1260
SspMI	CTAG	1 cut(s)	1176
StyD4I	CCNGG	5 cut(s)	175, 1473, 1474, 1487, 1537
StyI	CCWWGG	8 cut(s)	396, 408, 462, 606, 615, 681, 747, 1143
TaaI	ACNGT	6 cut(s)	628, 694, 760, 958, 1042, 1244
TaiI	ACGT	3 cut(s)	1154, 1378, 1387
TaqI	TCGA	1 cut(s)	11
TaqII	GACCGA	1 cut(s)	1178
TasI	AATT	4 cut(s)	652, 784, 982, 1260
TatI	WGTACW	4 cut(s)	579, 645, 711, 777
TauI	GCSGC	8 cut(s)	59, 283, 316, 319, 473, 662, 1076, 1579
Tru1I	TTAA	2 cut(s)	257, 1497
Tru9I	TTAA	2 cut(s)	257, 1497
TscAI	CASTG	6 cut(s)	376, 598, 699, 712, 1285, 1624
TseFI	GTSAC	1 cut(s)	1371
Tsp45I	GTSAC	1 cut(s)	1371
TspDTI	ATGAA	3 cut(s)	444, 995, 1233
TspGWI	ACGGA	2 cut(s)	545, 599
TspMI	CCCGGG	1 cut(s)	1474
TspRI	CASTG	6 cut(s)	376, 598, 699, 712, 1285, 1624
Vha464I	CTTAAG	2 cut(s)	256, 1496
VpaK11BI	GGWCC	4 cut(s)	1240, 1252, 1407, 1612
XceI	RCATGY	1 cut(s)	130
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1150
XmaI	CCCGGG	1 cut(s)	1474
XmiI	GTMKAC	2 cut(s)	920, 1587
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	1 cut(s)	1176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.