Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00346

Orthogroup ID

OG0012043

Physical Location & Seq

Genomic Coordinates Forward (+)

85748 .. 87502

Gene Structure 1755 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G008960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGCGTCGTCGAAGCAGTTCAAGGAGGAGAGAGCTGAGGCAGAAGCGAGGAAAACCGCGCTTGATCTGAAAGATGGGAACAGAGAAAGAGAGTACGAAACAGCTGGGGTGAAGATGGACAGGGACATGTACGGCCAGCCAAGAGAGCCATCCCATGTGCAACAAGAAGCGAAGCCTGGTGTTATTGGGTCTGTTTTTAGGGCTGTGACCGGCACATTGGAGCATGCAAAGGACGCTGTTGTGGGCAAAAGCCATGACACTTCTGATGCAGCAAGAGAGCGTTCGGAATACACCACACTCAAGGCGAAGGAAACGACTGATGCGGCTGGAGAGAAGCTGGAGGAGTATAAGGAGGCCGCGGCTCGGCCGGCGAAGGAGGCTGGGGAGAAGACGAAGGAGGTGAAGGACACTGCTGCGGAGAAGGCCAAAGAGACCAAGGAGTCTGCCAAGGGGAAGGGGAGTGAGTATGCGGATTACACTTCGCAGAAGGCGAAGGAGGCCAAGTACTATGTTGCCGAGACCGGAAGTGAGGCTACGGAGAAGGCGAAAGAGACAAAGGATGCTGCGATGAGGAAGGCTGAGGAGTACACGGATTACACTGCTCAGAAGGCCAAGGAGGCCAAGGATACCACAGTAGGGAAGGCTAAAGAGTACACCAATTATGGGGCCGAGAAGGCAGAGGAGGCCAAGGACACTACAGTGGGGAAGGCCGGTGAGTACACGAACTATGCTGCCGAGAAGGCAAAGGGGGCCAAGGACACTACGGTGGGGAAGGCGGAGGAGTACAAGAATTACACCGCAGAAAAGGCAAAGGAGACTGCGGAGGCAACCAAAGAAAAGGCAAAAGAGACTGCGGAGGCAGCCAAAGACAAGACTAAAGAGACAGCGGAGTATACAGCTGAGAAAGCAAAAGAAGGGAAGGACACTACTGTGAGCAAGTTGGGTGGGCTCATGAATTACTTGACTGGTAAGAAAGAAGAAACCAAACAGAAGGCTTCAGAGACGGCTGAGACTGTCAAAGAGAACACTAAACAGGTGGCTGAGGCGGCGAGGGAGAAGACTGAAGAGACTGCCGAGGCAACCAAACAGAAGACCAAAGAGGCAACTGAAAAAACCAAGGAGACGTTGGGTGAGACCAAGGAGGAAGCTAGGAGAAAGATGGAGGAGCTGAGGCTAAGGGAGAAAGGTTATGAAGCGAGAGCAGGAGACATGGACCGTGATGACGACCGCGAGATTGAGGCAGCTAAGGGTACTGCAGCTAAGGGCACTGCAGCAAAGAGCAACATTTTTAGCTCACTTGGGAGTGTGAGTGATGCCATCAAGAGCAAGCTGACTCATCCAACCAATGTGGTGGAGGAGTCACGTGCTGCACGTGAGGAGGGGAGTACGGGGAGGACCAAGACTCCTGCTATGGTAGATGTACCTGTGGAGAAGGTGGGGATTGGCATCAGGGACACGCGCCCGGGGGCTGTGGCCGCGGCACTTAAGAAGTCTGACCAGATGTTTAGTCAAACTTTCAACGATCCTGGTAGTATGGGAGATGAGGGCAAGGTGGTTATGGAGCGGCGCGTGGTAGACGAAGCCGGAAATGTGCGTGTGGACCGCAGTGGCAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0009791 GO:0009838 GO:0009908 GO:0010227 GO:0022414 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048367 GO:0048437 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LEA_4

Protein Analysis

539

Amino Acids

58.83

Weight (kDa)

6.19

Isoelectric Point (pI)

22.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LEA_4	PF02987	135 - 173	2.1e-07	Late embryogenesis abundant protein
LEA_4	PF02987	178 - 218	2.7e-14	Late embryogenesis abundant protein
LEA_4	PF02987	219 - 262	5.3e-16	Late embryogenesis abundant protein
LEA_4	PF02987	241 - 284	1e-10	Late embryogenesis abundant protein
LEA_4	PF02987	276 - 315	5.7e-07	Late embryogenesis abundant protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012043)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36640 AT2G36640 AT3G53040
fragaria_vesca	FvH4_6g17400
malus_domestica	MD09G1267600.v1.1
prunus_persica	Prupe.7G121500_v2.0.a1 Prupe.7G121500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0471651
rosa_laevigata	RLG00000024148
rosa_multiflora	Rmu_co8483845.1_g000001 Rmu_sc0005631.1_g000008
rosa_roxburghii	Rroxscaffold_6G00409690
rosa_rugosa	Rorug03G0118600
rosa_samantha	Rh3AG169800 Rh3BG195500 Rh3CG186200 Rh3CG195500 Rh3DG179500
rosa_wichuraiana	Rw0G008960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	439
AccBSI	CCGCTC	1 cut(s)	1564
AccI	GTMKAC	2 cut(s)	893, 1575
AccII	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
AclWI	GGATC	1 cut(s)	1517
AcoI	YGGCCR	3 cut(s)	133, 365, 1473
AcuI	CTGAAG	2 cut(s)	981, 1083
AcvI	CACGTG	2 cut(s)	1364, 1373
AcyI	GRCGYC	1 cut(s)	5
AfiI	CCNNNNNNNGG	3 cut(s)	363, 636, 663
AflII	CTTAAG	1 cut(s)	1484
AflIII	ACRYGT	1 cut(s)	126
AgsI	TTSAA	2 cut(s)	22, 1519
AjnI	CCWGG	2 cut(s)	175, 1525
AleI	CACNNNNGTG	3 cut(s)	698, 764, 929
AlwI	GGATC	1 cut(s)	1517
Ama87I	CYCGRG	1 cut(s)	1462
ApeKI	GCWGC	9 cut(s)	269, 413, 563, 731, 860, 1241, 1256, 1271, 1367
Asp700I	GAANNNNTTC	1 cut(s)	17
AspLEI	GCGC	3 cut(s)	61, 1461, 1569
AspS9I	GGNCC	5 cut(s)	666, 750, 1213, 1395, 1600
AsuC2I	CCSGG	2 cut(s)	1463, 1464
AsuHPI	GGTGA	4 cut(s)	121, 412, 725, 1142
AvaI	CYCGRG	1 cut(s)	1462
AvaII	GGWCC	3 cut(s)	1213, 1395, 1600
BaeGI	GKGCMC	1 cut(s)	1268
BaeI	ACNNNNGTAYC	2 cut(s)	618, 651
BanII	GRGCYC	1 cut(s)	951
BarI	GAAGNNNNNNTAC	2 cut(s)	517, 549
BbrPI	CACGTG	2 cut(s)	1364, 1373
BbsI	GAAGAC	3 cut(s)	395, 1064, 1097
BbvCI	CCTCAGC	4 cut(s)	36, 579, 1041, 1169
BbvI	GCAGC	9 cut(s)	281, 400, 550, 718, 872, 1253, 1268, 1283, 1354
BccI	CCATC	5 cut(s)	68, 109, 157, 1153, 1325
BceAI	ACGGC	2 cut(s)	148, 1020
BciT130I	CCWGG	2 cut(s)	177, 1527
BciVI	GTATCC	1 cut(s)	619
BcnI	CCSGG	2 cut(s)	1463, 1464
BfaI	CTAG	1 cut(s)	1149
BfmI	CTRYAG	3 cut(s)	696, 1254, 1269
BfrI	CTTAAG	1 cut(s)	1484
BfuI	GTATCC	1 cut(s)	619
BglI	GCCNNNNNGGC	3 cut(s)	617, 674, 740
BmcAI	AGTACT	1 cut(s)	506
Bme1390I	CCNGG	4 cut(s)	177, 1463, 1464, 1527
Bme18I	GGWCC	3 cut(s)	1213, 1395, 1600
BmeT110I	CYCGRG	1 cut(s)	1462
BmgT120I	GGNCC	5 cut(s)	666, 750, 1213, 1395, 1600
BmiI	GGNNCC	2 cut(s)	667, 751
BmrFI	CCNGG	4 cut(s)	177, 1463, 1464, 1527
BmsI	GCATC	5 cut(s)	256, 310, 550, 1303, 1455
BpiI	GAAGAC	3 cut(s)	395, 1064, 1097
BpmI	CTGGAG	2 cut(s)	348, 359
Bpu10I	CCTNAGC	7 cut(s)	36, 579, 1041, 1169, 1175, 1245, 1260
BpuEI	CTTGAG	1 cut(s)	284
BpuMI	CCSGG	2 cut(s)	1463, 1464
BsaAI	YACGTR	2 cut(s)	1364, 1373
BsaBI	GATNNNNATC	1 cut(s)	1445
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	3 cut(s)	425, 512, 1127
BsaWI	WCCGGW	1 cut(s)	521
BsaXI	ACNNNNNCTCC	6 cut(s)	488, 518, 1294, 1324, 1387, 1417
Bsc4I	CCNNNNNNNGG	3 cut(s)	363, 636, 663
Bse118I	RCCGGY	3 cut(s)	209, 367, 710
Bse1I	ACTGG	1 cut(s)	970
Bse8I	GATNNNNATC	1 cut(s)	1445
BseBI	CCWGG	2 cut(s)	177, 1527
BseGI	GGATG	3 cut(s)	149, 565, 1336
BseJI	GATNNNNATC	1 cut(s)	1445
BseLI	CCNNNNNNNGG	3 cut(s)	363, 636, 663
BseMII	CTCAG	7 cut(s)	27, 570, 617, 891, 999, 1032, 1160
BseNI	ACTGG	1 cut(s)	970
BseRI	GAGGAG	8 cut(s)	41, 356, 596, 695, 794, 1178, 1370, 1391
BseSI	GKGCMC	1 cut(s)	1268
BseX3I	CGGCCG	1 cut(s)	365
BseXI	GCAGC	9 cut(s)	281, 400, 550, 718, 872, 1253, 1268, 1283, 1354
BseYI	CCCAGC	2 cut(s)	104, 380
BsgI	GTGCAG	1 cut(s)	1353
Bsh1236I	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
Bsh1285I	CGRYCG	2 cut(s)	368, 1228
BsiEI	CGRYCG	2 cut(s)	368, 1228
BsiHKCI	CYCGRG	1 cut(s)	1462
BsiSI	CCGG	6 cut(s)	210, 368, 522, 711, 1463, 1584
BslFI	GGGAC	2 cut(s)	137, 1466
BslI	CCNNNNNNNGG	3 cut(s)	363, 636, 663
BsmBI	CGTCTC	2 cut(s)	995, 1115
BsmFI	GGGAC	2 cut(s)	137, 1466
Bso31I	GGTCTC	3 cut(s)	425, 512, 1127
BsoBI	CYCGRG	1 cut(s)	1462
Bsp1286I	GDGCHC	2 cut(s)	951, 1268
Bsp143I	GATC	2 cut(s)	64, 1522
BspCNI	CTCAG	7 cut(s)	28, 571, 616, 892, 1000, 1033, 1161
BspFNI	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
BspHI	TCATGA	1 cut(s)	951
BspLI	GGNNCC	2 cut(s)	667, 751
BspMAI	CTGCAG	2 cut(s)	1258, 1273
BspPI	GGATC	1 cut(s)	1517
BspTI	CTTAAG	1 cut(s)	1484
BspTNI	GGTCTC	3 cut(s)	425, 512, 1127
BsrBI	CCGCTC	1 cut(s)	1564
BsrFI	RCCGGY	3 cut(s)	209, 367, 710
BsrI	ACTGG	1 cut(s)	970
BssAI	RCCGGY	3 cut(s)	209, 367, 710
BssMI	GATC	2 cut(s)	64, 1522
BssNAI	GTATAC	1 cut(s)	894
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	8 cut(s)	435, 447, 612, 621, 687, 753, 1116, 1137
Bst1107I	GTATAC	1 cut(s)	894
Bst2UI	CCWGG	2 cut(s)	177, 1527
Bst4CI	ACNGT	6 cut(s)	634, 700, 766, 931, 1015, 1217
Bst6I	CTCTTC	1 cut(s)	1059
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	1484
BstBAI	YACGTR	2 cut(s)	1364, 1373
BstC8I	GCNNGC	4 cut(s)	137, 225, 369, 1328
BstDSI	CCRYGG	2 cut(s)	357, 1476
BstF5I	GGATG	3 cut(s)	149, 565, 1336
BstFNI	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
BstHHI	GCGC	3 cut(s)	61, 1461, 1569
BstKTI	GATC	2 cut(s)	67, 1525
BstMBI	GATC	2 cut(s)	64, 1522
BstMCI	CGRYCG	2 cut(s)	368, 1228
BstNI	CCWGG	2 cut(s)	177, 1527
BstNSI	RCATGY	2 cut(s)	130, 227
BstSCI	CCNGG	4 cut(s)	175, 1461, 1462, 1525
BstSFI	CTRYAG	3 cut(s)	696, 1254, 1269
BstSLI	GKGCMC	1 cut(s)	1268
BstUI	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
BstV1I	GCAGC	9 cut(s)	281, 400, 550, 718, 872, 1253, 1268, 1283, 1354
BstV2I	GAAGAC	3 cut(s)	395, 1064, 1097
BstXI	CCANNNNNNTGG	1 cut(s)	1351
BstZ17I	GTATAC	1 cut(s)	894
BstZI	CGGCCG	1 cut(s)	365
BsuI	GTATCC	1 cut(s)	619
BtgI	CCRYGG	2 cut(s)	357, 1476
BtgZI	GCGATG	1 cut(s)	581
BtsCI	GGATG	3 cut(s)	149, 565, 1336
BtsI	GCAGTG	4 cut(s)	408, 597, 1266, 1612
BtsIMutI	CAGTG	5 cut(s)	408, 597, 705, 1266, 1612
Cac8I	GCNNGC	4 cut(s)	137, 225, 369, 1328
CciI	TCATGA	1 cut(s)	951
CfoI	GCGC	3 cut(s)	61, 1461, 1569
Cfr10I	RCCGGY	3 cut(s)	209, 367, 710
Cfr13I	GGNCC	5 cut(s)	666, 750, 1213, 1395, 1600
Cfr42I	CCGCGG	2 cut(s)	360, 1479
Cfr9I	CCCGGG	1 cut(s)	1462
CseI	GACGC	1 cut(s)	242
CspCI	CAANNNNNGTGG	4 cut(s)	925, 960, 1329, 1364
CviAII	CATG	6 cut(s)	127, 155, 224, 254, 952, 1210
DpnI	GATC	2 cut(s)	66, 1524
DpnII	GATC	2 cut(s)	64, 1522
DrdI	GACNNNNNNGTC	1 cut(s)	439
DseDI	GACNNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	3 cut(s)	133, 365, 1473
EagI	CGGCCG	1 cut(s)	365
Eam1104I	CTCTTC	1 cut(s)	1059
EarI	CTCTTC	1 cut(s)	1059
EciI	GGCGGA	1 cut(s)	791
EclXI	CGGCCG	1 cut(s)	365
Eco130I	CCWWGG	8 cut(s)	435, 447, 612, 621, 687, 753, 1116, 1137
Eco24I	GRGCYC	1 cut(s)	951
Eco31I	GGTCTC	3 cut(s)	425, 512, 1127
Eco47I	GGWCC	3 cut(s)	1213, 1395, 1600
Eco52I	CGGCCG	1 cut(s)	365
Eco57I	CTGAAG	2 cut(s)	981, 1083
Eco72I	CACGTG	2 cut(s)	1364, 1373
Eco88I	CYCGRG	1 cut(s)	1462
EcoRII	CCWGG	2 cut(s)	175, 1525
EcoT14I	CCWWGG	8 cut(s)	435, 447, 612, 621, 687, 753, 1116, 1137
EcoT38I	GRGCYC	1 cut(s)	951
ErhI	CCWWGG	8 cut(s)	435, 447, 612, 621, 687, 753, 1116, 1137
Esp3I	CGTCTC	2 cut(s)	995, 1115
FaeI	CATG	6 cut(s)	130, 158, 227, 257, 955, 1213
FaqI	GGGAC	2 cut(s)	137, 1466
FatI	CATG	6 cut(s)	126, 154, 223, 253, 951, 1209
FblI	GTMKAC	2 cut(s)	893, 1575
FokI	GGATG	3 cut(s)	136, 572, 1323
FriOI	GRGCYC	1 cut(s)	951
FspBI	CTAG	1 cut(s)	1149
GlaI	GCGC	3 cut(s)	60, 1460, 1568
GsaI	CCCAGC	2 cut(s)	108, 384
GsuI	CTGGAG	2 cut(s)	348, 359
HapII	CCGG	6 cut(s)	210, 368, 522, 711, 1463, 1584
HgaI	GACGC	1 cut(s)	242
HhaI	GCGC	3 cut(s)	61, 1461, 1569
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	6 cut(s)	130, 158, 227, 257, 955, 1213
Hin6I	GCGC	3 cut(s)	59, 1459, 1567
HinP1I	GCGC	3 cut(s)	59, 1459, 1567
HinfI	GANTC	4 cut(s)	440, 1333, 1358, 1402
HpaII	CCGG	6 cut(s)	210, 368, 522, 711, 1463, 1584
HphI	GGTGA	4 cut(s)	121, 412, 725, 1142
Hpy166II	GTNNAC	6 cut(s)	588, 654, 720, 894, 1576, 1600
Hpy188I	TCNGA	6 cut(s)	69, 265, 286, 606, 1000, 1495
Hpy188III	TCNNGA	2 cut(s)	952, 1321
Hpy8I	GTNNAC	6 cut(s)	588, 654, 720, 894, 1576, 1600
Hpy99I	CGWCG	2 cut(s)	10, 13
HpyCH4III	ACNGT	6 cut(s)	634, 700, 766, 931, 1015, 1217
HpyCH4IV	ACGT	3 cut(s)	1124, 1363, 1372
HpyCH4V	TGCA	6 cut(s)	160, 227, 269, 1256, 1271, 1370
HpySE526I	ACGT	3 cut(s)	1124, 1363, 1372
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	6 cut(s)	130, 158, 227, 257, 955, 1213
HspAI	GCGC	3 cut(s)	59, 1459, 1567
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
KspI	CCGCGG	2 cut(s)	360, 1479
Kzo9I	GATC	2 cut(s)	64, 1522
LmnI	GCTCC	3 cut(s)	220, 1165, 1561
Lsp1109I	GCAGC	9 cut(s)	281, 400, 550, 718, 872, 1253, 1268, 1283, 1354
LweI	GCATC	5 cut(s)	256, 310, 550, 1303, 1455
MaeI	CTAG	1 cut(s)	1149
MaeII	ACGT	3 cut(s)	1124, 1363, 1372
MaeIII	GTNAC	2 cut(s)	205, 1359
MalI	GATC	2 cut(s)	66, 1524
MbiI	CCGCTC	1 cut(s)	1564
MboI	GATC	2 cut(s)	64, 1522
MboII	GAAGA	6 cut(s)	124, 400, 989, 1069, 1076, 1102
MhlI	GDGCHC	2 cut(s)	951, 1268
MluCI	AATT	3 cut(s)	658, 790, 955
MlyI	GAGTC	4 cut(s)	449, 1327, 1367, 1396
MmeI	TCCRAC	1 cut(s)	1364
MroNI	GCCGGC	1 cut(s)	367
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	1 cut(s)	1485
MslI	CAYNNNNRTG	3 cut(s)	698, 764, 929
MspA1I	CMGCKG	5 cut(s)	104, 359, 887, 899, 1478
MspCI	CTTAAG	1 cut(s)	1484
MspI	CCGG	6 cut(s)	210, 368, 522, 711, 1463, 1584
MspR9I	CCNGG	4 cut(s)	177, 1463, 1464, 1527
MvaI	CCWGG	2 cut(s)	177, 1527
MvnI	CGCG	6 cut(s)	59, 359, 1230, 1459, 1478, 1569
NaeI	GCCGGC	1 cut(s)	369
NciI	CCSGG	2 cut(s)	1463, 1464
NdeII	GATC	2 cut(s)	64, 1522
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	6 cut(s)	130, 158, 227, 257, 955, 1213
NlaIV	GGNNCC	2 cut(s)	667, 751
NmeAIII	GCCGAG	5 cut(s)	343, 541, 694, 760, 1099
NmuCI	GTSAC	2 cut(s)	205, 1359
NspI	RCATGY	2 cut(s)	130, 227
OliI	CACNNNNGTG	3 cut(s)	698, 764, 929
PaeI	GCATGC	1 cut(s)	227
PagI	TCATGA	1 cut(s)	951
PciI	ACATGT	1 cut(s)	126
PcsI	WCGNNNNNNNCGW	3 cut(s)	488, 542, 1369
PdiI	GCCGGC	1 cut(s)	369
PdmI	GAANNNNTTC	1 cut(s)	17
PleI	GAGTC	4 cut(s)	448, 1327, 1366, 1396
PmaCI	CACGTG	2 cut(s)	1364, 1373
PmlI	CACGTG	2 cut(s)	1364, 1373
PpsI	GAGTC	4 cut(s)	448, 1327, 1366, 1396
Ppu21I	YACGTR	2 cut(s)	1364, 1373
PscI	ACATGT	1 cut(s)	126
Psp6I	CCWGG	2 cut(s)	175, 1525
PspCI	CACGTG	2 cut(s)	1364, 1373
PspFI	CCCAGC	2 cut(s)	104, 380
PspGI	CCWGG	2 cut(s)	175, 1525
PspN4I	GGNNCC	2 cut(s)	667, 751
PspPI	GGNCC	5 cut(s)	666, 750, 1213, 1395, 1600
PstI	CTGCAG	2 cut(s)	1258, 1273
PvuII	CAGCTG	2 cut(s)	104, 899
RseI	CAYNNNNRTG	3 cut(s)	698, 764, 929
SacII	CCGCGG	2 cut(s)	360, 1479
SaqAI	TTAA	1 cut(s)	1485
Sau3AI	GATC	2 cut(s)	64, 1522
Sau96I	GGNCC	5 cut(s)	666, 750, 1213, 1395, 1600
ScaI	AGTACT	1 cut(s)	506
SchI	GAGTC	4 cut(s)	449, 1327, 1367, 1396
ScrFI	CCNGG	4 cut(s)	177, 1463, 1464, 1527
SduI	GDGCHC	2 cut(s)	951, 1268
SfaNI	GCATC	5 cut(s)	256, 310, 550, 1303, 1455
SfcI	CTRYAG	3 cut(s)	696, 1254, 1269
SfiI	GGCCNNNNNGGCC	1 cut(s)	617
Sfr303I	CCGCGG	2 cut(s)	360, 1479
SgrBI	CCGCGG	2 cut(s)	360, 1479
SinI	GGWCC	3 cut(s)	1213, 1395, 1600
SmaI	CCCGGG	1 cut(s)	1464
SmiMI	CAYNNNNRTG	3 cut(s)	698, 764, 929
SmlI	CTYRAG	2 cut(s)	299, 1484
SmoI	CTYRAG	2 cut(s)	299, 1484
SphI	GCATGC	1 cut(s)	227
Sse9I	AATT	3 cut(s)	658, 790, 955
SspMI	CTAG	1 cut(s)	1149
StyD4I	CCNGG	4 cut(s)	175, 1461, 1462, 1525
StyI	CCWWGG	8 cut(s)	435, 447, 612, 621, 687, 753, 1116, 1137
TaaI	ACNGT	6 cut(s)	634, 700, 766, 931, 1015, 1217
TaiI	ACGT	3 cut(s)	1127, 1366, 1375
TaqI	TCGA	1 cut(s)	11
TasI	AATT	3 cut(s)	658, 790, 955
TatI	WGTACW	5 cut(s)	504, 585, 651, 717, 783
TauI	GCSGC	7 cut(s)	326, 359, 362, 1049, 1478, 1481, 1567
Tru1I	TTAA	1 cut(s)	1485
Tru9I	TTAA	1 cut(s)	1485
TscAI	CASTG	5 cut(s)	415, 604, 705, 1273, 1612
TseFI	GTSAC	2 cut(s)	205, 1359
TseI	GCWGC	9 cut(s)	269, 413, 563, 731, 860, 1241, 1256, 1271, 1367
Tsp45I	GTSAC	2 cut(s)	205, 1359
TspDTI	ATGAA	2 cut(s)	968, 1206
TspGWI	ACGGA	2 cut(s)	551, 605
TspMI	CCCGGG	1 cut(s)	1462
TspRI	CASTG	5 cut(s)	415, 604, 705, 1273, 1612
Vha464I	CTTAAG	1 cut(s)	1484
VpaK11BI	GGWCC	3 cut(s)	1213, 1395, 1600
XceI	RCATGY	2 cut(s)	130, 227
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1123
XmaI	CCCGGG	1 cut(s)	1462
XmiI	GTMKAC	2 cut(s)	893, 1575
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	1 cut(s)	1149
ZrmI	AGTACT	1 cut(s)	506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.