Rmu_co8489703.1_g000001

Phospholipase A1-Igamma1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8489703.1
Physical Location & Seq
Forward (+)
12 .. 1571
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8489703.1_g000001.1.cds

Sequence Viewer

Length: 1560 bp
atgtatgctcatattccggccactcaagcggcctccgcagcagcccggtttcccttgatccgatctcaacagcaccaagaagctgttcttgatcatctcccacaaacaaagacatcaaacaggaccaaccgtctagctgaatcactatcccacctcctccatcttcacatagaaacccctcctaaaaccgacagtcctcgcttttccaattggaatatgtttactgaagagaagcattcaactcccacaacttctcccaaggaaataatatccgaaaagtggcgtgaaatccacggctcaaaagattgggagggtctaatggatccactccacccttggctaagaagagagatagtcaagtacggtgaatttgcacaggcaacatatgatgctttcgactttgactcattctctgagttctgcgggagctgcaggtacaacaagaacaagctctttgatgttttgggactgagcaaaaatggatatgcagttagcaaatacatttacgccatgtcccatatagacatgcctaattggctggagaggtcacatttggttgagacttggagcaaagattcaaactggatgggatttgttgcagtgagtgatgacgaggagacgagaaggatcggaaggagagatattgctgtggcttggcgtgggacggtggcgccatccgaatggtatgaggatctgcagaggaagttggaacctattggagatttggatgccaaagttgaacatgggtttcttgggatttacaagtccaagagtgagaaaaccaggtacaacaaatctagtgcctcagagcaagtcatgaaggaagtgactaggcttgttgggttttataaatccaagggtgaagaagtgagtcttacaattacagggcatagcttgggtggtgctttggctttgctcaatgcttacgaagctgcaaaatcaattcctgggctacccattagtgtcatttcatttggggcacctagagtgggaaacaatgctttcagagatgagctaaaccaaatgggggtcaagacactgagggttgtggtcaagcaagacgtggttccgaaaatgccgggacttgttttgaatgaaggtttgcagaagtttgaagaaattaccggcacattggaatgggtttatacacatgttggagctgaactgaaagttgatgtcggctcgtcgccttatctcaagaaacatggtttcaattttctagggtttcatagccttgagacttatcttcaccttgtggatgggtatttgaataaagaaactagctttaggtcaaatgccaggagggattttgccttggtgaacaaggcatgtgacatgttggtggaggatcttagaatcccacactgttggtaccaattggaacacaagggacttgtttgtaatcatcatgggagatgggttaaacccataagagagcctgaagacattccttcacctactagagaagcagaagaacaagctcatgctcttcaagtagagatacaatcagattatgtacttcaatctttatgtaccgctaatatgaaaggtgaattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

519

Amino Acids

59.1

Weight (kDa)

6.44

Isoelectric Point (pI)

50.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 849
Acc36I ACCTGC 1 cut(s) 423
Acc65I GGTACC 1 cut(s) 1371
AccB1I GGYRCC 3 cut(s) 670, 979, 1371
AciI CCGC 4 cut(s) 29, 36, 423, 1536
AclWI GGATC 6 cut(s) 52, 317, 330, 635, 699, 1356
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 2 cut(s) 368, 1553
AcuI CTGAAG 2 cut(s) 246, 1461
AcyI GRCGYC 1 cut(s) 671
AdeI CACNNNGTG 1 cut(s) 1255
AfaI GTAC 6 cut(s) 362, 437, 788, 1373, 1518, 1534
AfiI CCNNNNNNNGG 3 cut(s) 279, 989, 1027
AflIII ACRYGT 2 cut(s) 1150, 1335
AgsI TTSAA 9 cut(s) 240, 579, 740, 1093, 1115, 1213, 1270, 1493, 1523
AhdI GACNNNNNGTC 1 cut(s) 129
AjiI CACGTC 1 cut(s) 1063
AjnI CCWGG 3 cut(s) 782, 946, 1298
AjuI GAANNNNNNNTTGG 2 cut(s) 69, 101
Alw26I GTCTC 3 cut(s) 554, 611, 1232
AlwI GGATC 6 cut(s) 52, 317, 330, 635, 699, 1356
AoxI GGCC 2 cut(s) 18, 30
ApeKI GCWGC 4 cut(s) 38, 41, 429, 932
ApoI RAATTY 2 cut(s) 368, 1553
Asp700I GAANNNNTTC 2 cut(s) 84, 1446
Asp718I GGTACC 1 cut(s) 1371
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 1 cut(s) 123
AsuC2I CCSGG 2 cut(s) 46, 1080
AsuHPI GGTGA 5 cut(s) 377, 872, 1241, 1330, 1446
AvaII GGWCC 1 cut(s) 123
BaeGI GKGCMC 1 cut(s) 982
BamHI GGATCC 1 cut(s) 322
BanI GGYRCC 3 cut(s) 670, 979, 1371
BbsI GAAGAC 1 cut(s) 1449
BbvI GCAGC 4 cut(s) 50, 53, 416, 919
BccI CCATC 5 cut(s) 168, 580, 682, 1253, 1410
BceAI ACGGC 1 cut(s) 310
BciT130I CCWGG 3 cut(s) 784, 948, 1300
BclI TGATCA 1 cut(s) 91
BcnI CCSGG 2 cut(s) 46, 1080
BcoDI GTCTC 3 cut(s) 554, 611, 1232
BfaI CTAG 7 cut(s) 134, 798, 831, 984, 1220, 1281, 1461
BfmI CTRYAG 2 cut(s) 430, 695
BfoI RGCGCY 1 cut(s) 674
BfuAI ACCTGC 1 cut(s) 423
BglI GCCNNNNNGGC 1 cut(s) 535
BisI GCNGC 5 cut(s) 30, 39, 42, 430, 933
BlsI GCNGC 5 cut(s) 31, 40, 43, 431, 934
Bme1390I CCNGG 5 cut(s) 46, 784, 948, 1080, 1300
Bme18I GGWCC 1 cut(s) 123
BmeRI GACNNNNNGTC 1 cut(s) 129
BmgBI CACGTC 1 cut(s) 1063
BmgT120I GGNCC 1 cut(s) 123
BmiI GGNNCC 6 cut(s) 324, 672, 711, 981, 1068, 1373
BmrFI CCNGG 5 cut(s) 46, 784, 948, 1080, 1300
BmsI GCATC 2 cut(s) 379, 718
BpiI GAAGAC 1 cut(s) 1449
BpmI CTGGAG 1 cut(s) 560
BpuEI CTTGAG 3 cut(s) 9, 1181, 1256
BpuMI CCSGG 2 cut(s) 46, 1080
BsaHI GRCGYC 1 cut(s) 671
BsaJI CCNNGG 6 cut(s) 258, 292, 335, 855, 947, 1314
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bsc4I CCNNNNNNNGG 3 cut(s) 279, 989, 1027
Bse118I RCCGGY 1 cut(s) 1124
Bse1I ACTGG 1 cut(s) 587
BseBI CCWGG 3 cut(s) 784, 948, 1300
BseDI CCNNGG 6 cut(s) 258, 292, 335, 855, 947, 1314
BseGI GGATG 4 cut(s) 591, 674, 733, 1264
BseLI CCNNNNNNNGG 3 cut(s) 279, 989, 1027
BseMII CTCAG 4 cut(s) 405, 461, 819, 1031
BseNI ACTGG 1 cut(s) 587
BseRI GAGGAG 2 cut(s) 146, 629
BseSI GKGCMC 1 cut(s) 982
BseXI GCAGC 4 cut(s) 50, 53, 416, 919
BshFI GGCC 2 cut(s) 20, 32
BshNI GGYRCC 3 cut(s) 670, 979, 1371
BsiSI CCGG 4 cut(s) 17, 46, 1079, 1125
BslFI GGGAC 5 cut(s) 480, 499, 676, 1095, 1404
BslI CCNNNNNNNGG 3 cut(s) 279, 989, 1027
BsmAI GTCTC 3 cut(s) 554, 611, 1232
BsmBI CGTCTC 1 cut(s) 611
BsmFI GGGAC 5 cut(s) 480, 499, 676, 1095, 1404
BsmI GAATGC 1 cut(s) 235
BsnI GGCC 2 cut(s) 20, 32
Bsp1286I GDGCHC 1 cut(s) 982
Bsp143I GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
BspACI CCGC 4 cut(s) 29, 36, 423, 1536
BspANI GGCC 2 cut(s) 20, 32
BspCNI CTCAG 4 cut(s) 406, 462, 818, 1032
BspHI TCATGA 1 cut(s) 816
BspLI GGNNCC 6 cut(s) 324, 672, 711, 981, 1068, 1373
BspMAI CTGCAG 2 cut(s) 434, 699
BspMI ACCTGC 1 cut(s) 423
BspPI GGATC 6 cut(s) 52, 317, 330, 635, 699, 1356
BspQI GCTCTTC 1 cut(s) 1494
BspT107I GGYRCC 3 cut(s) 670, 979, 1371
BsrFI RCCGGY 1 cut(s) 1124
BsrI ACTGG 1 cut(s) 587
BssAI RCCGGY 1 cut(s) 1124
BssECI CCNNGG 6 cut(s) 258, 292, 335, 855, 947, 1314
BssMI GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
BssNI GRCGYC 1 cut(s) 671
BssT1I CCWWGG 4 cut(s) 258, 335, 855, 1314
Bst2UI CCWGG 3 cut(s) 784, 948, 1300
Bst4CI ACNGT 5 cut(s) 131, 194, 365, 667, 1367
Bst6I CTCTTC 3 cut(s) 222, 340, 1494
BstACI GRCGYC 1 cut(s) 671
BstDEI CTNAG 6 cut(s) 341, 414, 470, 805, 1040, 1352
BstDSI CCRYGG 1 cut(s) 292
BstF5I GGATG 4 cut(s) 591, 674, 733, 1264
BstH2I RGCGCY 1 cut(s) 674
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
BstMAI GTCTC 3 cut(s) 554, 611, 1232
BstMBI GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
BstMWI GCNNNNNNNGC 6 cut(s) 26, 35, 38, 429, 535, 929
BstNI CCWGG 3 cut(s) 784, 948, 1300
BstNSI RCATGY 4 cut(s) 529, 1154, 1332, 1339
BstSCI CCNGG 5 cut(s) 44, 782, 946, 1078, 1298
BstSFI CTRYAG 2 cut(s) 430, 695
BstSLI GKGCMC 1 cut(s) 982
BstV1I GCAGC 4 cut(s) 50, 53, 416, 919
BstV2I GAAGAC 1 cut(s) 1449
BstX2I RGATCY 3 cut(s) 322, 691, 1348
BstXI CCANNNNNNTGG 2 cut(s) 681, 1368
BstYI RGATCY 3 cut(s) 322, 691, 1348
BsuRI GGCC 2 cut(s) 20, 32
BtgI CCRYGG 1 cut(s) 292
BtrI CACGTC 1 cut(s) 1063
BtsCI GGATG 4 cut(s) 591, 674, 733, 1264
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 3 cut(s) 606, 1037, 1363
BveI ACCTGC 1 cut(s) 423
CciI TCATGA 1 cut(s) 816
CfoI GCGC 1 cut(s) 673
Cfr10I RCCGGY 1 cut(s) 1124
Cfr13I GGNCC 1 cut(s) 123
CsiI ACCWGGT 1 cut(s) 782
Csp6I GTAC 6 cut(s) 361, 436, 787, 1372, 1517, 1533
CviQI GTAC 6 cut(s) 361, 436, 787, 1372, 1517, 1533
DdeI CTNAG 6 cut(s) 341, 414, 470, 805, 1040, 1352
DinI GGCGCC 1 cut(s) 672
DpnI GATC 7 cut(s) 59, 64, 93, 324, 629, 693, 1350
DpnII GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
DraIII CACNNNGTG 1 cut(s) 1255
DriI GACNNNNNGTC 1 cut(s) 129
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 3 cut(s) 222, 340, 1494
Eam1105I GACNNNNNGTC 1 cut(s) 129
EarI CTCTTC 3 cut(s) 222, 340, 1494
Eco130I CCWWGG 4 cut(s) 258, 335, 855, 1314
Eco47I GGWCC 1 cut(s) 123
Eco57I CTGAAG 2 cut(s) 246, 1461
EcoRII CCWGG 3 cut(s) 782, 946, 1298
EcoT14I CCWWGG 4 cut(s) 258, 335, 855, 1314
EgeI GGCGCC 1 cut(s) 672
EheI GGCGCC 1 cut(s) 672
ErhI CCWWGG 4 cut(s) 258, 335, 855, 1314
Esp3I CGTCTC 1 cut(s) 611
FalI AAGNNNNNCTT 4 cut(s) 72, 104, 858, 890
FaqI GGGAC 5 cut(s) 480, 499, 676, 1095, 1404
FauI CCCGC 1 cut(s) 416
FauNDI CATATG 1 cut(s) 385
FbaI TGATCA 1 cut(s) 91
Fnu4HI GCNGC 5 cut(s) 30, 39, 42, 430, 933
FokI GGATG 4 cut(s) 598, 661, 740, 1271
Fsp4HI GCNGC 5 cut(s) 30, 39, 42, 430, 933
FspBI CTAG 7 cut(s) 134, 798, 831, 984, 1220, 1281, 1461
GlaI GCGC 1 cut(s) 672
GluI GCNGC 5 cut(s) 30, 39, 42, 430, 933
GsuI CTGGAG 1 cut(s) 560
HaeII RGCGCY 1 cut(s) 674
HaeIII GGCC 2 cut(s) 20, 32
HapII CCGG 4 cut(s) 17, 46, 1079, 1125
HhaI GCGC 1 cut(s) 673
Hin1I GRCGYC 1 cut(s) 671
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HinfI GANTC 5 cut(s) 140, 404, 575, 871, 1356
HpaII CCGG 4 cut(s) 17, 46, 1079, 1125
HphI GGTGA 5 cut(s) 377, 872, 1241, 1330, 1446
Hpy166II GTNNAC 2 cut(s) 222, 1321
Hpy188I TCNGA 9 cut(s) 62, 274, 415, 632, 679, 808, 1007, 1071, 1510
Hpy188III TCNNGA 4 cut(s) 89, 817, 1033, 1198
Hpy8I GTNNAC 2 cut(s) 222, 1321
Hpy99I CGWCG 1 cut(s) 1189
HpyAV CCTTC 5 cut(s) 618, 627, 814, 1091, 1461
HpyCH4III ACNGT 5 cut(s) 131, 194, 365, 667, 1367
HpyCH4IV ACGT 1 cut(s) 1062
HpyCH4V TGCA 7 cut(s) 374, 432, 488, 599, 697, 935, 1105
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 35, 38, 429, 535, 929
HpyF3I CTNAG 6 cut(s) 341, 414, 470, 805, 1040, 1352
HpySE526I ACGT 1 cut(s) 1062
Hsp92I GRCGYC 1 cut(s) 671
HspAI GCGC 1 cut(s) 671
KasI GGCGCC 1 cut(s) 670
KpnI GGTACC 1 cut(s) 1375
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
LguI GCTCTTC 1 cut(s) 1494
LmnI GCTCC 3 cut(s) 426, 567, 1157
Lsp1109I GCAGC 4 cut(s) 50, 53, 416, 919
LweI GCATC 2 cut(s) 379, 718
MabI ACCWGGT 1 cut(s) 782
MaeI CTAG 7 cut(s) 134, 798, 831, 984, 1220, 1281, 1461
MaeII ACGT 1 cut(s) 1062
MaeIII GTNAC 3 cut(s) 546, 826, 1331
MalI GATC 7 cut(s) 59, 64, 93, 324, 629, 693, 1350
MboI GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
MboII GAAGA 9 cut(s) 155, 239, 357, 875, 1127, 1238, 1454, 1481, 1484
MfeI CAATTG 2 cut(s) 208, 1376
MflI RGATCY 3 cut(s) 322, 691, 1348
MhlI GDGCHC 1 cut(s) 982
MluCI AATT 9 cut(s) 208, 368, 532, 879, 942, 1119, 1213, 1376, 1553
Mly113I GGCGCC 1 cut(s) 671
MlyI GAGTC 2 cut(s) 398, 880
MmeI TCCRAC 2 cut(s) 687, 1135
MroXI GAANNNNTTC 2 cut(s) 84, 1446
MseI TTAA 1 cut(s) 1422
MslI CAYNNNNRTG 3 cut(s) 679, 1135, 1340
MspI CCGG 4 cut(s) 17, 46, 1079, 1125
MspR9I CCNGG 5 cut(s) 46, 784, 948, 1080, 1300
MunI CAATTG 2 cut(s) 208, 1376
Mva1269I GAATGC 1 cut(s) 235
MvaI CCWGG 3 cut(s) 784, 948, 1300
MwoI GCNNNNNNNGC 6 cut(s) 26, 35, 38, 429, 535, 929
NarI GGCGCC 1 cut(s) 671
NciI CCSGG 2 cut(s) 46, 1080
NdeI CATATG 1 cut(s) 385
NdeII GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
NlaIV GGNNCC 6 cut(s) 324, 672, 711, 981, 1068, 1373
NmuCI GTSAC 3 cut(s) 546, 826, 1331
NspI RCATGY 4 cut(s) 529, 1154, 1332, 1339
PagI TCATGA 1 cut(s) 816
PciI ACATGT 2 cut(s) 1150, 1335
PciSI GCTCTTC 1 cut(s) 1494
PctI GAATGC 1 cut(s) 235
PdmI GAANNNNTTC 2 cut(s) 84, 1446
PfeI GAWTC 3 cut(s) 140, 575, 1356
PkrI GCNGC 5 cut(s) 31, 40, 43, 431, 934
PleI GAGTC 2 cut(s) 398, 879
PluTI GGCGCC 1 cut(s) 674
PpsI GAGTC 2 cut(s) 398, 879
PscI ACATGT 2 cut(s) 1150, 1335
PsiI TTATAA 1 cut(s) 849
Psp6I CCWGG 3 cut(s) 782, 946, 1298
PspGI CCWGG 3 cut(s) 782, 946, 1298
PspN4I GGNNCC 6 cut(s) 324, 672, 711, 981, 1068, 1373
PspPI GGNCC 1 cut(s) 123
PstI CTGCAG 2 cut(s) 434, 699
PsuI RGATCY 3 cut(s) 322, 691, 1348
RsaI GTAC 6 cut(s) 362, 437, 788, 1373, 1518, 1534
RsaNI GTAC 6 cut(s) 361, 436, 787, 1372, 1517, 1533
RseI CAYNNNNRTG 3 cut(s) 679, 1135, 1340
SapI GCTCTTC 1 cut(s) 1494
SaqAI TTAA 1 cut(s) 1422
SatI GCNGC 5 cut(s) 30, 39, 42, 430, 933
Sau3AI GATC 7 cut(s) 57, 62, 91, 322, 627, 691, 1348
Sau96I GGNCC 1 cut(s) 123
SchI GAGTC 2 cut(s) 398, 880
ScrFI CCNGG 5 cut(s) 46, 784, 948, 1080, 1300
SduI GDGCHC 1 cut(s) 982
SexAI ACCWGGT 1 cut(s) 782
SfaNI GCATC 2 cut(s) 379, 718
SfcI CTRYAG 2 cut(s) 430, 695
SfoI GGCGCC 1 cut(s) 672
SinI GGWCC 1 cut(s) 123
SmiMI CAYNNNNRTG 3 cut(s) 679, 1135, 1340
SmlI CTYRAG 3 cut(s) 24, 1196, 1235
SmoI CTYRAG 3 cut(s) 24, 1196, 1235
Sse9I AATT 9 cut(s) 208, 368, 532, 879, 942, 1119, 1213, 1376, 1553
SsiI CCGC 4 cut(s) 29, 36, 423, 1536
SspDI GGCGCC 1 cut(s) 670
SspMI CTAG 7 cut(s) 134, 798, 831, 984, 1220, 1281, 1461
StyD4I CCNGG 5 cut(s) 44, 782, 946, 1078, 1298
StyI CCWWGG 4 cut(s) 258, 335, 855, 1314
TaaI ACNGT 5 cut(s) 131, 194, 365, 667, 1367
TaiI ACGT 1 cut(s) 1065
TaqI TCGA 1 cut(s) 396
TasI AATT 9 cut(s) 208, 368, 532, 879, 942, 1119, 1213, 1376, 1553
TatI WGTACW 1 cut(s) 1516
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 3 cut(s) 140, 575, 1356
Tru1I TTAA 1 cut(s) 1422
Tru9I TTAA 1 cut(s) 1422
TscAI CASTG 3 cut(s) 606, 1044, 1370
TseFI GTSAC 3 cut(s) 546, 826, 1331
TseI GCWGC 4 cut(s) 38, 41, 429, 932
Tsp45I GTSAC 3 cut(s) 546, 826, 1331
TspDTI ATGAA 5 cut(s) 833, 960, 1110, 1217, 1559
TspRI CASTG 3 cut(s) 606, 1044, 1370
VpaK11BI GGWCC 1 cut(s) 123
XapI RAATTY 2 cut(s) 368, 1553
XceI RCATGY 4 cut(s) 529, 1154, 1332, 1339
XcmI CCANNNNNNNNNTGG 1 cut(s) 333
XmnI GAANNNNTTC 2 cut(s) 84, 1446
XspI CTAG 7 cut(s) 134, 798, 831, 984, 1220, 1281, 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.