Rmu_sc0004889.1_g000024

Phospholipase A1-Igamma1

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004889.1
Physical Location & Seq
Forward (+)
96822 .. 98384
1563 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004889.1_g000024.1.cds

Sequence Viewer

Length: 1563 bp
atgatgtatgctcatattccggccactcaagcggcctccgcagcagcccggtttcccttgatccgatctcaacagcaccaagaagctgttcttgatcatcacccacaaacaaagacatcaaacaggaccaaccgtccagctgaatcgctagcccacctcctccatcttcacatagaaacccctcctaaaaccgacagtcctcgcttttccaattggaatatgtttactgaagagaagcattcaactcccacaacttctcccaaggaaataatatccgaaaagtggcgtgaaatccacggctcaaaagattgggagggtctaatggatccactccacccttggctaagaagagagatagtcaagtacggtgaatttgcacaggcaacatatgatgctttcgactttgactcattctctgagttctgcgggagctgcaggtacaacaagaacaagctctttgatgttttgggactgagcaaaaatggatatgcagttagcaaatacatttacgccatgtcccatatagacatgcctaattggctggagaggtcacatttggttgagacttggagcaaagattcaaactggatgggatttgttgcagtgagtgatgacgaggagacgagaaggatcggaaggagagatattgctgtggcttggcgtgggacggtggcgccatccgaatggtatgaggatctgcagaggaagttggaacctattggagatttggatgccaaagttgaacatgggtttcttgggatttacaagtccaagagtgagaaaaccaggtacaacaaatctagtgcctcagagcaagtcatgaaggaagtgactaggcttgttgggttttataaatccaagggtgaagaagtgagtcttacaattacagggcatagcttgggtggtgctttggctttgctcaatgcttacgaagctgcaaaatcaattcctgggctacccattagtgtcatttcatttggggcacctagagtgggaaacaatgctttcagagatgagctaaaccaaatgggggtcaagacactgagggttgtggtcaagcaagacgtggttccgaaaatgccgggacttgttttgaatgaaggtttgcagaagtttgaagaaattaccggcacattggaatgggtttatacacatgttggagctgaactgaaagttgatgtcggctcgtcgccttatctcaagaaacatggtttcaattttctagggtttcatagccttgagacttatcttcaccttgtggatgggtatttgaataaagaaactagctttaggtcaaatgccaggagggattttgccttggtgaacaaggcatgtgacatgttggtggaggatcttagaatcccacactgttggtaccaattggaacacaagggacttgtttgtaatcatcatgggagatgggttaaacccataagagagcctgaagacattccttcacctactagagaagcagaagaacaagctcatgctcttcaagtagagatacaatcagattatgtacttcaatctttatgtaccgctaatatgaaaggtgaattttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

520

Amino Acids

59.22

Weight (kDa)

6.46

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
Acc36I ACCTGC 1 cut(s) 426
Acc65I GGTACC 1 cut(s) 1374
AccB1I GGYRCC 3 cut(s) 673, 982, 1374
AciI CCGC 4 cut(s) 32, 39, 426, 1539
AclWI GGATC 6 cut(s) 55, 320, 333, 638, 702, 1359
AcoI YGGCCR 1 cut(s) 21
AcsI RAATTY 2 cut(s) 371, 1556
AcuI CTGAAG 2 cut(s) 249, 1464
AcyI GRCGYC 1 cut(s) 674
AdeI CACNNNGTG 1 cut(s) 1258
AfaI GTAC 6 cut(s) 365, 440, 791, 1376, 1521, 1537
AfiI CCNNNNNNNGG 3 cut(s) 282, 992, 1030
AflIII ACRYGT 2 cut(s) 1153, 1338
AgsI TTSAA 9 cut(s) 243, 582, 743, 1096, 1118, 1216, 1273, 1496, 1526
AhdI GACNNNNNGTC 1 cut(s) 132
AjiI CACGTC 1 cut(s) 1066
AjnI CCWGG 3 cut(s) 785, 949, 1301
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
Alw26I GTCTC 3 cut(s) 557, 614, 1235
AlwI GGATC 6 cut(s) 55, 320, 333, 638, 702, 1359
AoxI GGCC 2 cut(s) 21, 33
ApeKI GCWGC 4 cut(s) 41, 44, 432, 935
ApoI RAATTY 2 cut(s) 371, 1556
Asp700I GAANNNNTTC 2 cut(s) 87, 1449
Asp718I GGTACC 1 cut(s) 1374
AspLEI GCGC 1 cut(s) 676
AspS9I GGNCC 1 cut(s) 126
AsuC2I CCSGG 2 cut(s) 49, 1083
AsuHPI GGTGA 6 cut(s) 92, 380, 875, 1244, 1333, 1449
AsuNHI GCTAGC 1 cut(s) 148
AvaII GGWCC 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 985
BamHI GGATCC 1 cut(s) 325
BanI GGYRCC 3 cut(s) 673, 982, 1374
BbsI GAAGAC 1 cut(s) 1452
BbvI GCAGC 4 cut(s) 53, 56, 419, 922
BccI CCATC 5 cut(s) 171, 583, 685, 1256, 1413
BceAI ACGGC 1 cut(s) 313
BciT130I CCWGG 3 cut(s) 787, 951, 1303
BclI TGATCA 1 cut(s) 94
BcnI CCSGG 2 cut(s) 49, 1083
BcoDI GTCTC 3 cut(s) 557, 614, 1235
BfaI CTAG 7 cut(s) 149, 801, 834, 987, 1223, 1284, 1464
BfmI CTRYAG 2 cut(s) 433, 698
BfoI RGCGCY 1 cut(s) 677
BfuAI ACCTGC 1 cut(s) 426
BglI GCCNNNNNGGC 1 cut(s) 538
BisI GCNGC 5 cut(s) 33, 42, 45, 433, 936
BlsI GCNGC 5 cut(s) 34, 43, 46, 434, 937
Bme1390I CCNGG 5 cut(s) 49, 787, 951, 1083, 1303
Bme18I GGWCC 1 cut(s) 126
BmeRI GACNNNNNGTC 1 cut(s) 132
BmgBI CACGTC 1 cut(s) 1066
BmgT120I GGNCC 1 cut(s) 126
BmiI GGNNCC 6 cut(s) 327, 675, 714, 984, 1071, 1376
BmrFI CCNGG 5 cut(s) 49, 787, 951, 1083, 1303
BmsI GCATC 2 cut(s) 382, 721
BmtI GCTAGC 1 cut(s) 152
BpiI GAAGAC 1 cut(s) 1452
BpmI CTGGAG 1 cut(s) 563
BpuEI CTTGAG 3 cut(s) 12, 1184, 1259
BpuMI CCSGG 2 cut(s) 49, 1083
BsaHI GRCGYC 1 cut(s) 674
BsaJI CCNNGG 6 cut(s) 261, 295, 338, 858, 950, 1317
BsaXI ACNNNNNCTCC 2 cut(s) 241, 271
Bsc4I CCNNNNNNNGG 3 cut(s) 282, 992, 1030
Bse118I RCCGGY 1 cut(s) 1127
Bse1I ACTGG 1 cut(s) 590
BseBI CCWGG 3 cut(s) 787, 951, 1303
BseDI CCNNGG 6 cut(s) 261, 295, 338, 858, 950, 1317
BseGI GGATG 4 cut(s) 594, 677, 736, 1267
BseLI CCNNNNNNNGG 3 cut(s) 282, 992, 1030
BseMII CTCAG 4 cut(s) 408, 464, 822, 1034
BseNI ACTGG 1 cut(s) 590
BseRI GAGGAG 2 cut(s) 149, 632
BseSI GKGCMC 1 cut(s) 985
BseXI GCAGC 4 cut(s) 53, 56, 419, 922
BshFI GGCC 2 cut(s) 23, 35
BshNI GGYRCC 3 cut(s) 673, 982, 1374
BsiSI CCGG 4 cut(s) 20, 49, 1082, 1128
BslFI GGGAC 5 cut(s) 483, 502, 679, 1098, 1407
BslI CCNNNNNNNGG 3 cut(s) 282, 992, 1030
BsmAI GTCTC 3 cut(s) 557, 614, 1235
BsmBI CGTCTC 1 cut(s) 614
BsmFI GGGAC 5 cut(s) 483, 502, 679, 1098, 1407
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 2 cut(s) 23, 35
Bsp1286I GDGCHC 1 cut(s) 985
Bsp143I GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
BspACI CCGC 4 cut(s) 32, 39, 426, 1539
BspANI GGCC 2 cut(s) 23, 35
BspCNI CTCAG 4 cut(s) 409, 465, 821, 1035
BspHI TCATGA 1 cut(s) 819
BspLI GGNNCC 6 cut(s) 327, 675, 714, 984, 1071, 1376
BspMAI CTGCAG 2 cut(s) 437, 702
BspMI ACCTGC 1 cut(s) 426
BspOI GCTAGC 1 cut(s) 152
BspPI GGATC 6 cut(s) 55, 320, 333, 638, 702, 1359
BspQI GCTCTTC 1 cut(s) 1497
BspT107I GGYRCC 3 cut(s) 673, 982, 1374
BsrFI RCCGGY 1 cut(s) 1127
BsrI ACTGG 1 cut(s) 590
BssAI RCCGGY 1 cut(s) 1127
BssECI CCNNGG 6 cut(s) 261, 295, 338, 858, 950, 1317
BssMI GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
BssNI GRCGYC 1 cut(s) 674
BssT1I CCWWGG 4 cut(s) 261, 338, 858, 1317
Bst2UI CCWGG 3 cut(s) 787, 951, 1303
Bst4CI ACNGT 5 cut(s) 134, 197, 368, 670, 1370
Bst6I CTCTTC 3 cut(s) 225, 343, 1497
BstACI GRCGYC 1 cut(s) 674
BstC8I GCNNGC 1 cut(s) 150
BstDEI CTNAG 6 cut(s) 344, 417, 473, 808, 1043, 1355
BstDSI CCRYGG 1 cut(s) 295
BstF5I GGATG 4 cut(s) 594, 677, 736, 1267
BstH2I RGCGCY 1 cut(s) 677
BstHHI GCGC 1 cut(s) 676
BstKTI GATC 7 cut(s) 63, 68, 97, 328, 633, 697, 1354
BstMAI GTCTC 3 cut(s) 557, 614, 1235
BstMBI GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
BstMWI GCNNNNNNNGC 6 cut(s) 29, 38, 41, 432, 538, 932
BstNI CCWGG 3 cut(s) 787, 951, 1303
BstNSI RCATGY 4 cut(s) 532, 1157, 1335, 1342
BstSCI CCNGG 5 cut(s) 47, 785, 949, 1081, 1301
BstSFI CTRYAG 2 cut(s) 433, 698
BstSLI GKGCMC 1 cut(s) 985
BstV1I GCAGC 4 cut(s) 53, 56, 419, 922
BstV2I GAAGAC 1 cut(s) 1452
BstX2I RGATCY 3 cut(s) 325, 694, 1351
BstXI CCANNNNNNTGG 2 cut(s) 684, 1371
BstYI RGATCY 3 cut(s) 325, 694, 1351
BsuRI GGCC 2 cut(s) 23, 35
BtgI CCRYGG 1 cut(s) 295
BtrI CACGTC 1 cut(s) 1066
BtsCI GGATG 4 cut(s) 594, 677, 736, 1267
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 3 cut(s) 609, 1040, 1366
BveI ACCTGC 1 cut(s) 426
Cac8I GCNNGC 1 cut(s) 150
CciI TCATGA 1 cut(s) 819
CfoI GCGC 1 cut(s) 676
Cfr10I RCCGGY 1 cut(s) 1127
Cfr13I GGNCC 1 cut(s) 126
CsiI ACCWGGT 1 cut(s) 785
Csp6I GTAC 6 cut(s) 364, 439, 790, 1375, 1520, 1536
CviQI GTAC 6 cut(s) 364, 439, 790, 1375, 1520, 1536
DdeI CTNAG 6 cut(s) 344, 417, 473, 808, 1043, 1355
DinI GGCGCC 1 cut(s) 675
DpnI GATC 7 cut(s) 62, 67, 96, 327, 632, 696, 1353
DpnII GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
DraIII CACNNNGTG 1 cut(s) 1258
DriI GACNNNNNGTC 1 cut(s) 132
EaeI YGGCCR 1 cut(s) 21
Eam1104I CTCTTC 3 cut(s) 225, 343, 1497
Eam1105I GACNNNNNGTC 1 cut(s) 132
EarI CTCTTC 3 cut(s) 225, 343, 1497
Eco130I CCWWGG 4 cut(s) 261, 338, 858, 1317
Eco47I GGWCC 1 cut(s) 126
Eco57I CTGAAG 2 cut(s) 249, 1464
EcoRII CCWGG 3 cut(s) 785, 949, 1301
EcoT14I CCWWGG 4 cut(s) 261, 338, 858, 1317
EgeI GGCGCC 1 cut(s) 675
EheI GGCGCC 1 cut(s) 675
ErhI CCWWGG 4 cut(s) 261, 338, 858, 1317
Esp3I CGTCTC 1 cut(s) 614
FalI AAGNNNNNCTT 4 cut(s) 75, 107, 861, 893
FaqI GGGAC 5 cut(s) 483, 502, 679, 1098, 1407
FauI CCCGC 1 cut(s) 419
FauNDI CATATG 1 cut(s) 388
FbaI TGATCA 1 cut(s) 94
Fnu4HI GCNGC 5 cut(s) 33, 42, 45, 433, 936
FokI GGATG 4 cut(s) 601, 664, 743, 1274
Fsp4HI GCNGC 5 cut(s) 33, 42, 45, 433, 936
FspBI CTAG 7 cut(s) 149, 801, 834, 987, 1223, 1284, 1464
GlaI GCGC 1 cut(s) 675
GluI GCNGC 5 cut(s) 33, 42, 45, 433, 936
GsuI CTGGAG 1 cut(s) 563
HaeII RGCGCY 1 cut(s) 677
HaeIII GGCC 2 cut(s) 23, 35
HapII CCGG 4 cut(s) 20, 49, 1082, 1128
HhaI GCGC 1 cut(s) 676
Hin1I GRCGYC 1 cut(s) 674
Hin6I GCGC 1 cut(s) 674
HinP1I GCGC 1 cut(s) 674
HinfI GANTC 5 cut(s) 143, 407, 578, 874, 1359
HpaII CCGG 4 cut(s) 20, 49, 1082, 1128
HphI GGTGA 6 cut(s) 92, 380, 875, 1244, 1333, 1449
Hpy166II GTNNAC 2 cut(s) 225, 1324
Hpy188I TCNGA 9 cut(s) 65, 277, 418, 635, 682, 811, 1010, 1074, 1513
Hpy188III TCNNGA 4 cut(s) 92, 820, 1036, 1201
Hpy8I GTNNAC 2 cut(s) 225, 1324
Hpy99I CGWCG 1 cut(s) 1192
HpyAV CCTTC 5 cut(s) 621, 630, 817, 1094, 1464
HpyCH4III ACNGT 5 cut(s) 134, 197, 368, 670, 1370
HpyCH4IV ACGT 1 cut(s) 1065
HpyCH4V TGCA 7 cut(s) 377, 435, 491, 602, 700, 938, 1108
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 38, 41, 432, 538, 932
HpyF3I CTNAG 6 cut(s) 344, 417, 473, 808, 1043, 1355
HpySE526I ACGT 1 cut(s) 1065
Hsp92I GRCGYC 1 cut(s) 674
HspAI GCGC 1 cut(s) 674
KasI GGCGCC 1 cut(s) 673
KpnI GGTACC 1 cut(s) 1378
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
LguI GCTCTTC 1 cut(s) 1497
LmnI GCTCC 3 cut(s) 429, 570, 1160
Lsp1109I GCAGC 4 cut(s) 53, 56, 419, 922
LweI GCATC 2 cut(s) 382, 721
MabI ACCWGGT 1 cut(s) 785
MaeI CTAG 7 cut(s) 149, 801, 834, 987, 1223, 1284, 1464
MaeII ACGT 1 cut(s) 1065
MaeIII GTNAC 3 cut(s) 549, 829, 1334
MalI GATC 7 cut(s) 62, 67, 96, 327, 632, 696, 1353
MboI GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
MboII GAAGA 9 cut(s) 158, 242, 360, 878, 1130, 1241, 1457, 1484, 1487
MfeI CAATTG 2 cut(s) 211, 1379
MflI RGATCY 3 cut(s) 325, 694, 1351
MhlI GDGCHC 1 cut(s) 985
MluCI AATT 9 cut(s) 211, 371, 535, 882, 945, 1122, 1216, 1379, 1556
Mly113I GGCGCC 1 cut(s) 674
MlyI GAGTC 2 cut(s) 401, 883
MmeI TCCRAC 2 cut(s) 690, 1138
MroXI GAANNNNTTC 2 cut(s) 87, 1449
MseI TTAA 1 cut(s) 1425
MslI CAYNNNNRTG 3 cut(s) 682, 1138, 1343
MspA1I CMGCKG 1 cut(s) 140
MspI CCGG 4 cut(s) 20, 49, 1082, 1128
MspR9I CCNGG 5 cut(s) 49, 787, 951, 1083, 1303
MunI CAATTG 2 cut(s) 211, 1379
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 3 cut(s) 787, 951, 1303
MwoI GCNNNNNNNGC 6 cut(s) 29, 38, 41, 432, 538, 932
NarI GGCGCC 1 cut(s) 674
NciI CCSGG 2 cut(s) 49, 1083
NdeI CATATG 1 cut(s) 388
NdeII GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
NheI GCTAGC 1 cut(s) 148
NlaIV GGNNCC 6 cut(s) 327, 675, 714, 984, 1071, 1376
NmuCI GTSAC 3 cut(s) 549, 829, 1334
NspI RCATGY 4 cut(s) 532, 1157, 1335, 1342
PagI TCATGA 1 cut(s) 819
PciI ACATGT 2 cut(s) 1153, 1338
PciSI GCTCTTC 1 cut(s) 1497
PctI GAATGC 1 cut(s) 238
PdmI GAANNNNTTC 2 cut(s) 87, 1449
PfeI GAWTC 3 cut(s) 143, 578, 1359
PkrI GCNGC 5 cut(s) 34, 43, 46, 434, 937
PleI GAGTC 2 cut(s) 401, 882
PluTI GGCGCC 1 cut(s) 677
PpsI GAGTC 2 cut(s) 401, 882
PscI ACATGT 2 cut(s) 1153, 1338
PsiI TTATAA 1 cut(s) 852
Psp6I CCWGG 3 cut(s) 785, 949, 1301
PspGI CCWGG 3 cut(s) 785, 949, 1301
PspN4I GGNNCC 6 cut(s) 327, 675, 714, 984, 1071, 1376
PspPI GGNCC 1 cut(s) 126
PstI CTGCAG 2 cut(s) 437, 702
PsuI RGATCY 3 cut(s) 325, 694, 1351
PvuII CAGCTG 1 cut(s) 140
RsaI GTAC 6 cut(s) 365, 440, 791, 1376, 1521, 1537
RsaNI GTAC 6 cut(s) 364, 439, 790, 1375, 1520, 1536
RseI CAYNNNNRTG 3 cut(s) 682, 1138, 1343
SapI GCTCTTC 1 cut(s) 1497
SaqAI TTAA 1 cut(s) 1425
SatI GCNGC 5 cut(s) 33, 42, 45, 433, 936
Sau3AI GATC 7 cut(s) 60, 65, 94, 325, 630, 694, 1351
Sau96I GGNCC 1 cut(s) 126
SchI GAGTC 2 cut(s) 401, 883
ScrFI CCNGG 5 cut(s) 49, 787, 951, 1083, 1303
SduI GDGCHC 1 cut(s) 985
SexAI ACCWGGT 1 cut(s) 785
SfaNI GCATC 2 cut(s) 382, 721
SfcI CTRYAG 2 cut(s) 433, 698
SfoI GGCGCC 1 cut(s) 675
SinI GGWCC 1 cut(s) 126
SmiMI CAYNNNNRTG 3 cut(s) 682, 1138, 1343
SmlI CTYRAG 3 cut(s) 27, 1199, 1238
SmoI CTYRAG 3 cut(s) 27, 1199, 1238
Sse9I AATT 9 cut(s) 211, 371, 535, 882, 945, 1122, 1216, 1379, 1556
SsiI CCGC 4 cut(s) 32, 39, 426, 1539
SspDI GGCGCC 1 cut(s) 673
SspMI CTAG 7 cut(s) 149, 801, 834, 987, 1223, 1284, 1464
StyD4I CCNGG 5 cut(s) 47, 785, 949, 1081, 1301
StyI CCWWGG 4 cut(s) 261, 338, 858, 1317
TaaI ACNGT 5 cut(s) 134, 197, 368, 670, 1370
TaiI ACGT 1 cut(s) 1068
TaqI TCGA 1 cut(s) 399
TasI AATT 9 cut(s) 211, 371, 535, 882, 945, 1122, 1216, 1379, 1556
TatI WGTACW 1 cut(s) 1519
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 3 cut(s) 143, 578, 1359
Tru1I TTAA 1 cut(s) 1425
Tru9I TTAA 1 cut(s) 1425
TscAI CASTG 3 cut(s) 609, 1047, 1373
TseFI GTSAC 3 cut(s) 549, 829, 1334
TseI GCWGC 4 cut(s) 41, 44, 432, 935
Tsp45I GTSAC 3 cut(s) 549, 829, 1334
TspDTI ATGAA 5 cut(s) 836, 963, 1113, 1220, 1562
TspRI CASTG 3 cut(s) 609, 1047, 1373
VpaK11BI GGWCC 1 cut(s) 126
XapI RAATTY 2 cut(s) 371, 1556
XceI RCATGY 4 cut(s) 532, 1157, 1335, 1342
XcmI CCANNNNNNNNNTGG 1 cut(s) 336
XmnI GAANNNNTTC 2 cut(s) 87, 1449
XspI CTAG 7 cut(s) 149, 801, 834, 987, 1223, 1284, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.