Belongs to the universal ribosomal protein uL1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63490 AT3G63490 |
| fragaria_vesca | FvH4_7g01650 FvH4_7g01650 |
| malus_domestica | MD02G1302000.v1.1 MD02G1302200.v1.1 MD07G1022000.v1.1 |
| prunus_persica | Prupe.2G022100_v2.0.a1 |
| pyrus_communis | pycom02g25420 pycom07g01670 |
| rosa_chinensis | RchiOBHm_Chr1g0317921 |
| rosa_laevigata | RLG00000030576 |
| rosa_multiflora | Rmu_co8493655.1_g000001 Rmu_ssc0000008.1_g000047 |
| rosa_roxburghii | Rroxscaffold_4G00330120 |
| rosa_rugosa | Rorug01G0018600 |
| rosa_samantha | Rh1AG030200 Rh1BG026300 Rh1CG028800 Rh1DG041300 |
| rosa_wichuraiana | Rw1G002280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 224 |
| AciI | CCGC | 1 cut(s) | 224 |
| AfaI | GTAC | 2 cut(s) | 13, 44 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 332, 333 |
| AgsI | TTSAA | 3 cut(s) | 100, 321, 355 |
| AluBI | AGCT | 1 cut(s) | 341 |
| AluI | AGCT | 1 cut(s) | 341 |
| Alw26I | GTCTC | 4 cut(s) | 10, 97, 179, 354 |
| AoxI | GGCC | 1 cut(s) | 152 |
| ApeKI | GCWGC | 2 cut(s) | 227, 341 |
| AsuHPI | GGTGA | 1 cut(s) | 302 |
| BbvI | GCAGC | 2 cut(s) | 214, 328 |
| BccI | CCATC | 1 cut(s) | 287 |
| BcoDI | GTCTC | 4 cut(s) | 10, 97, 179, 354 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BisI | GCNGC | 3 cut(s) | 225, 228, 342 |
| BlsI | GCNGC | 3 cut(s) | 226, 229, 343 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BsaI | GGTCTC | 1 cut(s) | 10 |
| BsaJI | CCNNGG | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 35, 65 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 332, 333 |
| Bse3DI | GCAATG | 1 cut(s) | 344 |
| BseDI | CCNNGG | 1 cut(s) | 240 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 332, 333 |
| BseMI | GCAATG | 1 cut(s) | 344 |
| BseMII | CTCAG | 2 cut(s) | 190, 195 |
| BseRI | GAGGAG | 5 cut(s) | 13, 40, 43, 46, 294 |
| BseXI | GCAGC | 2 cut(s) | 214, 328 |
| Bsh1236I | CGCG | 1 cut(s) | 224 |
| BshFI | GGCC | 1 cut(s) | 154 |
| BsiWI | CGTACG | 1 cut(s) | 42 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 332, 333 |
| BsmAI | GTCTC | 4 cut(s) | 10, 97, 179, 354 |
| BsmBI | CGTCTC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 154 |
| Bso31I | GGTCTC | 1 cut(s) | 10 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspANI | GGCC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 2 cut(s) | 189, 196 |
| BspFNI | CGCG | 1 cut(s) | 224 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspTNI | GGTCTC | 1 cut(s) | 10 |
| BsrDI | GCAATG | 1 cut(s) | 344 |
| BssECI | CCNNGG | 1 cut(s) | 240 |
| Bst6I | CTCTTC | 3 cut(s) | 31, 122, 350 |
| BstDEI | CTNAG | 2 cut(s) | 176, 204 |
| BstFNI | CGCG | 1 cut(s) | 224 |
| BstMAI | GTCTC | 4 cut(s) | 10, 97, 179, 354 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 109 |
| BstUI | CGCG | 1 cut(s) | 224 |
| BstV1I | GCAGC | 2 cut(s) | 214, 328 |
| BsuRI | GGCC | 1 cut(s) | 154 |
| Csp6I | GTAC | 2 cut(s) | 12, 43 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 129, 164 |
| CviAII | CATG | 1 cut(s) | 215 |
| CviJI | RGCY | 9 cut(s) | 5, 103, 112, 154, 208, 227, 260, 325, 341 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 103, 112, 154, 208, 227, 260, 325, 341 |
| CviQI | GTAC | 2 cut(s) | 12, 43 |
| DdeI | CTNAG | 2 cut(s) | 176, 204 |
| Eam1104I | CTCTTC | 3 cut(s) | 31, 122, 350 |
| EarI | CTCTTC | 3 cut(s) | 31, 122, 350 |
| Eco147I | AGGCCT | 1 cut(s) | 154 |
| Eco31I | GGTCTC | 1 cut(s) | 10 |
| Esp3I | CGTCTC | 1 cut(s) | 97 |
| FaeI | CATG | 1 cut(s) | 218 |
| FaiI | YATR | 1 cut(s) | 216 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 101, 133 |
| FatI | CATG | 1 cut(s) | 214 |
| Fnu4HI | GCNGC | 3 cut(s) | 225, 228, 342 |
| Fsp4HI | GCNGC | 3 cut(s) | 225, 228, 342 |
| FspBI | CTAG | 1 cut(s) | 156 |
| GluI | GCNGC | 3 cut(s) | 225, 228, 342 |
| HaeIII | GGCC | 1 cut(s) | 154 |
| Hin1II | CATG | 1 cut(s) | 218 |
| HinfI | GANTC | 3 cut(s) | 79, 279, 370 |
| HphI | GGTGA | 1 cut(s) | 302 |
| Hpy166II | GTNNAC | 1 cut(s) | 253 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 205 |
| Hpy8I | GTNNAC | 1 cut(s) | 253 |
| Hpy99I | CGWCG | 1 cut(s) | 224 |
| HpyAV | CCTTC | 3 cut(s) | 106, 159, 281 |
| HpyCH4IV | ACGT | 1 cut(s) | 41 |
| HpyCH4V | TGCA | 1 cut(s) | 344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 2 cut(s) | 176, 204 |
| HpySE526I | ACGT | 1 cut(s) | 41 |
| Hsp92II | CATG | 1 cut(s) | 218 |
| LmnI | GCTCC | 1 cut(s) | 307 |
| LpnPI | CCDG | 4 cut(s) | 89, 261, 321, 327 |
| Lsp1109I | GCAGC | 2 cut(s) | 214, 328 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MaeII | ACGT | 1 cut(s) | 41 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MboII | GAAGA | 5 cut(s) | 18, 109, 278, 281, 367 |
| MlyI | GAGTC | 3 cut(s) | 73, 273, 379 |
| MseI | TTAA | 1 cut(s) | 185 |
| MvnI | CGCG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 109 |
| NlaIII | CATG | 1 cut(s) | 218 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| NmuCI | GTSAC | 1 cut(s) | 232 |
| PceI | AGGCCT | 1 cut(s) | 154 |
| Pfl23II | CGTACG | 1 cut(s) | 42 |
| PkrI | GCNGC | 3 cut(s) | 226, 229, 343 |
| PleI | GAGTC | 3 cut(s) | 73, 273, 378 |
| PpsI | GAGTC | 3 cut(s) | 73, 273, 378 |
| PspLI | CGTACG | 1 cut(s) | 42 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| RsaI | GTAC | 2 cut(s) | 13, 44 |
| RsaNI | GTAC | 2 cut(s) | 12, 43 |
| SaqAI | TTAA | 1 cut(s) | 185 |
| SatI | GCNGC | 3 cut(s) | 225, 228, 342 |
| SchI | GAGTC | 3 cut(s) | 73, 273, 379 |
| SetI | ASST | 5 cut(s) | 44, 78, 252, 292, 343 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SseBI | AGGCCT | 1 cut(s) | 154 |
| SsiI | CCGC | 1 cut(s) | 224 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StuI | AGGCCT | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 44 |
| TauI | GCSGC | 1 cut(s) | 227 |
| Tru1I | TTAA | 1 cut(s) | 185 |
| Tru9I | TTAA | 1 cut(s) | 185 |
| TseFI | GTSAC | 1 cut(s) | 232 |
| TseI | GCWGC | 2 cut(s) | 227, 341 |
| Tsp45I | GTSAC | 1 cut(s) | 232 |
| TspGWI | ACGGA | 1 cut(s) | 49 |
| XspI | CTAG | 1 cut(s) | 156 |