Rmu_sc0000014.1_g000014

Glucan endo-1,3-beta-glucosidase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000014.1
Physical Location & Seq
Reverse (-)
77866 .. 83939
6074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000014.1_g000014.1.cds

Sequence Viewer

Length: 1320 bp
atgggtgttctagcttttgcagctttggttttcttggccatggctggccagtcaagtgccaattggtgtgtgtgcaagagtgggagtgatgcagtattgcagaagacattggactatgcctgtggagctggggctgactgtaaccccatacatccaaatggggcttgctacaaccctaacactgttaaagctcactgcgactatgctgtcaacagctatttccagaagaagggccaagctcaaggcacctgtgactttgccggcaccgcaacccctgttacatccgatcccagcgttactggttgtgttttcccatctagcgccagttcttccggcagtacgactccaagtaccggcacaaccaccccaagtaccggcaccaccaccccaaccaccggcaccaccaccccaaccaccggcacaacacccacaagtaccaacacaacaccaacaaccaccggaacaaccacaggaacaaccactgggacaaccaccggtgccactccatacactgcaactcccggagtatttggagtagggccatctggagctggcatcacggatgacagtgctgggattagactcattgacactactagggaagcggtggctaatcctgcagggattgaggcggctgtggtgaatctgattggggatggcgaagcggtccatgatcctttcttttatctctgtggacgtctgctatcttcgaagcgcgtgggtggcggtttgacggggcttcgtattgctatgcgtaatgaacgagtcctaaccctacttggaaaggatttggggcagtttgtatggttttatcaagcggcaatggtgaggaaggatcagattcagaggattcgggtgatccatgatgtacaacttcaaatatgggctcagcgcatgtacaacttttcgccggtggtggcagtggctctagagttcaggtacgaaaagtgccatggcatctgcaagaggtgcgggttcttcgcatctgtggcggcggcggcggggccagagatgctccttatagggctggcgaagctgggcttgatgtcaaagatggctgaagatatggtggtggtggatggaccagcgccggatgttgcagcaagtgttgctgtgaatgctccagaaaaacctgcggggaaccctaatttagaattagggttgaccgcaggttttactgggctgcacagaattgggccaggtgacatctctaatgtgggtgtgggctctgctggatcttcttctaggcttagggctaaaagaggcccaatggtggattttggtgttaagaagaagatctttgttaacgttagagattga

Protein Analysis

439

Amino Acids

45.27

Weight (kDa)

8.55

Isoelectric Point (pI)

25.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AatII GACGTC 1 cut(s) 700
Acc36I ACCTGC 2 cut(s) 1141, 1160
AccB1I GGYRCC 5 cut(s) 245, 263, 377, 398, 497
AccII CGCG 1 cut(s) 717
AclI AACGTT 1 cut(s) 1308
AclWI GGATC 5 cut(s) 281, 668, 843, 853, 1243
AcoI YGGCCR 2 cut(s) 36, 46
AcuI CTGAAG 1 cut(s) 1080
AcyI GRCGYC 1 cut(s) 697
AfaI GTAC 7 cut(s) 340, 352, 373, 436, 870, 899, 941
AfiI CCNNNNNNNGG 6 cut(s) 229, 353, 374, 395, 416, 1273
AgeI ACCGGT 1 cut(s) 494
AgsI TTSAA 1 cut(s) 878
AjnI CCWGG 1 cut(s) 1198
AluBI AGCT 8 cut(s) 14, 23, 128, 191, 216, 239, 551, 1036
AluI AGCT 8 cut(s) 14, 23, 128, 191, 216, 239, 551, 1036
AlwI GGATC 5 cut(s) 281, 668, 843, 853, 1243
AoxI GGCC 7 cut(s) 36, 46, 232, 539, 1004, 1196, 1264
ApeKI GCWGC 3 cut(s) 20, 1100, 1183
AsiGI ACCGGT 1 cut(s) 494
AspLEI GCGC 4 cut(s) 323, 717, 894, 1090
AspS9I GGNCC 7 cut(s) 232, 539, 667, 1004, 1082, 1196, 1265
AsuC2I CCSGG 1 cut(s) 522
AsuHPI GGTGA 4 cut(s) 652, 838, 868, 1214
AsuII TTCGAA 1 cut(s) 710
AvaII GGWCC 2 cut(s) 667, 1082
BalI TGGCCA 2 cut(s) 38, 48
BanI GGYRCC 5 cut(s) 245, 263, 377, 398, 497
BanII GRGCYC 2 cut(s) 889, 1229
BbsI GAAGAC 1 cut(s) 110
BbvI GCAGC 3 cut(s) 32, 1112, 1170
BccI CCATC 5 cut(s) 322, 550, 650, 1048, 1073
BciT130I CCWGG 1 cut(s) 1200
BcnI CCSGG 1 cut(s) 522
BfaI CTAG 5 cut(s) 11, 318, 597, 929, 1245
BfmI CTRYAG 1 cut(s) 618
BfoI RGCGCY 2 cut(s) 324, 1091
BfuAI ACCTGC 2 cut(s) 1141, 1160
BglII AGATCT 1 cut(s) 1296
BisI GCNGC 8 cut(s) 21, 633, 819, 993, 996, 999, 1101, 1184
BlpI GCTNAGC 1 cut(s) 888
BlsI GCNGC 8 cut(s) 22, 634, 820, 994, 997, 1000, 1102, 1185
Bme1390I CCNGG 2 cut(s) 522, 1200
Bme18I GGWCC 2 cut(s) 667, 1082
BmgT120I GGNCC 7 cut(s) 232, 539, 667, 1004, 1082, 1196, 1265
BmiI GGNNCC 7 cut(s) 247, 265, 379, 400, 499, 1005, 1142
BmrFI CCNGG 2 cut(s) 522, 1200
BmrI ACTGGG 2 cut(s) 492, 1188
BmsI GCATC 5 cut(s) 79, 564, 966, 992, 1002
BmuI ACTGGG 2 cut(s) 492, 1188
BpiI GAAGAC 1 cut(s) 110
BpmI CTGGAG 2 cut(s) 567, 1107
Bpu10I CCTNAGC 1 cut(s) 1250
Bpu1102I GCTNAGC 1 cut(s) 888
Bpu14I TTCGAA 1 cut(s) 710
BpuEI CTTGAG 1 cut(s) 225
BpuMI CCSGG 1 cut(s) 522
BsaHI GRCGYC 1 cut(s) 697
BsaJI CCNNGG 2 cut(s) 39, 952
BsaWI WCCGGW 2 cut(s) 458, 494
BsaXI ACNNNNNCTCC 2 cut(s) 502, 532
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 353, 374, 395, 416, 1273
Bse118I RCCGGY 7 cut(s) 260, 353, 374, 395, 416, 494, 910
Bse1I ACTGG 5 cut(s) 49, 304, 324, 487, 1183
Bse3DI GCAATG 1 cut(s) 828
BseBI CCWGG 1 cut(s) 1200
BseDI CCNNGG 2 cut(s) 39, 952
BseGI GGATG 6 cut(s) 151, 281, 568, 661, 1084, 1099
BseLI CCNNNNNNNGG 6 cut(s) 229, 353, 374, 395, 416, 1273
BseMI GCAATG 1 cut(s) 828
BseMII CTCAG 1 cut(s) 902
BseNI ACTGG 5 cut(s) 49, 304, 324, 487, 1183
BseXI GCAGC 3 cut(s) 32, 1112, 1170
BseYI CCCAGC 4 cut(s) 128, 290, 572, 1036
BsgI GTGCAG 1 cut(s) 1169
Bsh1236I CGCG 1 cut(s) 717
BshFI GGCC 7 cut(s) 38, 48, 234, 541, 1006, 1198, 1266
BshNI GGYRCC 5 cut(s) 245, 263, 377, 398, 497
BshTI ACCGGT 1 cut(s) 494
BslFI GGGAC 1 cut(s) 499
BslI CCNNNNNNNGG 6 cut(s) 229, 353, 374, 395, 416, 1273
BsmFI GGGAC 1 cut(s) 499
BsmI GAATGC 1 cut(s) 1123
BsnI GGCC 7 cut(s) 38, 48, 234, 541, 1006, 1198, 1266
Bsp119I TTCGAA 1 cut(s) 710
Bsp1286I GDGCHC 2 cut(s) 889, 1229
Bsp1407I TGTACA 2 cut(s) 868, 897
Bsp143I GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
Bsp1720I GCTNAGC 1 cut(s) 888
Bsp19I CCATGG 2 cut(s) 39, 952
BspANI GGCC 7 cut(s) 38, 48, 234, 541, 1006, 1198, 1266
BspCNI CTCAG 1 cut(s) 901
BspFNI CGCG 1 cut(s) 717
BspLI GGNNCC 7 cut(s) 247, 265, 379, 400, 499, 1005, 1142
BspMAI CTGCAG 1 cut(s) 622
BspMI ACCTGC 2 cut(s) 1141, 1160
BspPI GGATC 5 cut(s) 281, 668, 843, 853, 1243
BspT104I TTCGAA 1 cut(s) 710
BspT107I GGYRCC 5 cut(s) 245, 263, 377, 398, 497
BsrDI GCAATG 1 cut(s) 828
BsrFI RCCGGY 7 cut(s) 260, 353, 374, 395, 416, 494, 910
BsrGI TGTACA 2 cut(s) 868, 897
BsrI ACTGG 5 cut(s) 49, 304, 324, 487, 1183
BssAI RCCGGY 7 cut(s) 260, 353, 374, 395, 416, 494, 910
BssECI CCNNGG 2 cut(s) 39, 952
BssMI GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
BssNI GRCGYC 1 cut(s) 697
BssT1I CCWWGG 2 cut(s) 39, 952
Bst2UI CCWGG 1 cut(s) 1200
Bst4CI ACNGT 3 cut(s) 140, 184, 569
BstACI GRCGYC 1 cut(s) 697
BstAPI GCANNNNNTGC 2 cut(s) 969, 1109
BstAUI TGTACA 2 cut(s) 868, 897
BstBI TTCGAA 1 cut(s) 710
BstC8I GCNNGC 5 cut(s) 46, 166, 262, 553, 1029
BstDEI CTNAG 2 cut(s) 888, 1250
BstDSI CCRYGG 2 cut(s) 39, 952
BstF5I GGATG 6 cut(s) 151, 281, 568, 661, 1084, 1099
BstFNI CGCG 1 cut(s) 717
BstH2I RGCGCY 2 cut(s) 324, 1091
BstHHI GCGC 4 cut(s) 323, 717, 894, 1090
BstKTI GATC 6 cut(s) 289, 676, 838, 861, 1238, 1299
BstMBI GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
BstNI CCWGG 1 cut(s) 1200
BstNSI RCATGY 1 cut(s) 898
BstSCI CCNGG 2 cut(s) 520, 1198
BstSFI CTRYAG 1 cut(s) 618
BstUI CGCG 1 cut(s) 717
BstV1I GCAGC 3 cut(s) 32, 1112, 1170
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 2 cut(s) 1235, 1296
BstYI RGATCY 2 cut(s) 1235, 1296
BsuRI GGCC 7 cut(s) 38, 48, 234, 541, 1006, 1198, 1266
BtgI CCRYGG 2 cut(s) 39, 952
BtsCI GGATG 6 cut(s) 151, 281, 568, 661, 1084, 1099
BtsI GCAGTG 3 cut(s) 193, 510, 927
BtsIMutI CAGTG 6 cut(s) 180, 193, 480, 510, 574, 927
BveI ACCTGC 2 cut(s) 1141, 1160
Cac8I GCNNGC 5 cut(s) 46, 166, 262, 553, 1029
CfoI GCGC 4 cut(s) 323, 717, 894, 1090
Cfr10I RCCGGY 7 cut(s) 260, 353, 374, 395, 416, 494, 910
Cfr13I GGNCC 7 cut(s) 232, 539, 667, 1004, 1082, 1196, 1265
Csp6I GTAC 7 cut(s) 339, 351, 372, 435, 869, 898, 940
CspAI ACCGGT 1 cut(s) 494
CviAII CATG 5 cut(s) 40, 671, 863, 895, 953
CviQI GTAC 7 cut(s) 339, 351, 372, 435, 869, 898, 940
DdeI CTNAG 2 cut(s) 888, 1250
DpnI GATC 6 cut(s) 288, 675, 837, 860, 1237, 1298
DpnII GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 2 cut(s) 36, 46
Eco130I CCWWGG 2 cut(s) 39, 952
Eco24I GRGCYC 2 cut(s) 889, 1229
Eco47I GGWCC 2 cut(s) 667, 1082
Eco57I CTGAAG 1 cut(s) 1080
EcoRII CCWGG 1 cut(s) 1198
EcoT14I CCWWGG 2 cut(s) 39, 952
EcoT38I GRGCYC 2 cut(s) 889, 1229
ErhI CCWWGG 2 cut(s) 39, 952
FaeI CATG 5 cut(s) 43, 674, 866, 898, 956
FalI AAGNNNNNCTT 4 cut(s) 1025, 1057, 1283, 1315
FaqI GGGAC 1 cut(s) 499
FatI CATG 5 cut(s) 39, 670, 862, 894, 952
FauI CCCGC 3 cut(s) 965, 994, 1129
Fnu4HI GCNGC 8 cut(s) 21, 633, 819, 993, 996, 999, 1101, 1184
FokI GGATG 6 cut(s) 138, 268, 575, 668, 1091, 1106
FriOI GRGCYC 2 cut(s) 889, 1229
Fsp4HI GCNGC 8 cut(s) 21, 633, 819, 993, 996, 999, 1101, 1184
FspBI CTAG 5 cut(s) 11, 318, 597, 929, 1245
GlaI GCGC 4 cut(s) 322, 716, 893, 1089
GluI GCNGC 8 cut(s) 21, 633, 819, 993, 996, 999, 1101, 1184
GsaI CCCAGC 4 cut(s) 132, 294, 576, 1040
GsuI CTGGAG 2 cut(s) 567, 1107
HaeII RGCGCY 2 cut(s) 324, 1091
HaeIII GGCC 7 cut(s) 38, 48, 234, 541, 1006, 1198, 1266
HhaI GCGC 4 cut(s) 323, 717, 894, 1090
Hin1I GRCGYC 1 cut(s) 697
Hin1II CATG 5 cut(s) 43, 674, 866, 898, 956
Hin6I GCGC 4 cut(s) 321, 715, 892, 1088
HinP1I GCGC 4 cut(s) 321, 715, 892, 1088
HincII GTYRAC 3 cut(s) 211, 1164, 1306
HindII GTYRAC 3 cut(s) 211, 1164, 1306
HinfI GANTC 6 cut(s) 343, 582, 643, 765, 841, 850
HpaI GTTAAC 1 cut(s) 1306
HphI GGTGA 4 cut(s) 652, 838, 868, 1214
Hpy166II GTNNAC 4 cut(s) 211, 695, 1164, 1306
Hpy188I TCNGA 4 cut(s) 286, 648, 840, 846
Hpy188III TCNNGA 4 cut(s) 223, 546, 929, 1124
Hpy8I GTNNAC 4 cut(s) 211, 695, 1164, 1306
HpyAV CCTTC 2 cut(s) 223, 826
HpyCH4III ACNGT 3 cut(s) 140, 184, 569
HpyCH4IV ACGT 2 cut(s) 697, 1308
HpyCH4V TGCA 9 cut(s) 20, 75, 92, 100, 515, 620, 963, 1100, 1186
HpyF3I CTNAG 2 cut(s) 888, 1250
HpySE526I ACGT 2 cut(s) 697, 1308
Hsp92I GRCGYC 1 cut(s) 697
Hsp92II CATG 5 cut(s) 43, 674, 866, 898, 956
HspAI GCGC 4 cut(s) 321, 715, 892, 1088
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
KspAI GTTAAC 1 cut(s) 1306
Kzo9I GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
LmnI GCTCC 4 cut(s) 125, 548, 1020, 1126
Lsp1109I GCAGC 3 cut(s) 32, 1112, 1170
LweI GCATC 5 cut(s) 79, 564, 966, 992, 1002
MaeI CTAG 5 cut(s) 11, 318, 597, 929, 1245
MaeII ACGT 2 cut(s) 697, 1308
MaeIII GTNAC 5 cut(s) 140, 251, 277, 295, 1202
MalI GATC 6 cut(s) 288, 675, 837, 860, 1237, 1298
MboI GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
MfeI CAATTG 1 cut(s) 61
MflI RGATCY 2 cut(s) 1235, 1296
MhlI GDGCHC 2 cut(s) 889, 1229
MlsI TGGCCA 2 cut(s) 38, 48
MluCI AATT 4 cut(s) 61, 1147, 1154, 1191
MluNI TGGCCA 2 cut(s) 38, 48
MlyI GAGTC 3 cut(s) 337, 576, 774
MnlI CCTC 5 cut(s) 622, 822, 840, 960, 1256
Mox20I TGGCCA 2 cut(s) 38, 48
MroNI GCCGGC 1 cut(s) 260
MscI TGGCCA 2 cut(s) 38, 48
MseI TTAA 3 cut(s) 186, 1287, 1305
MslI CAYNNNNRTG 1 cut(s) 156
Msp20I TGGCCA 2 cut(s) 38, 48
MspR9I CCNGG 2 cut(s) 522, 1200
MunI CAATTG 1 cut(s) 61
Mva1269I GAATGC 1 cut(s) 1123
MvaI CCWGG 1 cut(s) 1200
MvnI CGCG 1 cut(s) 717
NaeI GCCGGC 1 cut(s) 262
NciI CCSGG 1 cut(s) 522
NcoI CCATGG 2 cut(s) 39, 952
NdeII GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 5 cut(s) 43, 674, 866, 898, 956
NlaIV GGNNCC 7 cut(s) 247, 265, 379, 400, 499, 1005, 1142
NmuCI GTSAC 2 cut(s) 251, 1202
NspI RCATGY 1 cut(s) 898
NspV TTCGAA 1 cut(s) 710
PctI GAATGC 1 cut(s) 1123
PdiI GCCGGC 1 cut(s) 262
PfeI GAWTC 3 cut(s) 643, 841, 850
PfoI TCCNGGA 1 cut(s) 520
PinAI ACCGGT 1 cut(s) 494
PkrI GCNGC 8 cut(s) 22, 634, 820, 994, 997, 1000, 1102, 1185
PleI GAGTC 3 cut(s) 337, 576, 773
PpsI GAGTC 3 cut(s) 337, 576, 773
Psp1406I AACGTT 1 cut(s) 1308
Psp6I CCWGG 1 cut(s) 1198
PspFI CCCAGC 4 cut(s) 128, 290, 572, 1036
PspGI CCWGG 1 cut(s) 1198
PspN4I GGNNCC 7 cut(s) 247, 265, 379, 400, 499, 1005, 1142
PspPI GGNCC 7 cut(s) 232, 539, 667, 1004, 1082, 1196, 1265
PstI CTGCAG 1 cut(s) 622
PsuI RGATCY 2 cut(s) 1235, 1296
RsaI GTAC 7 cut(s) 340, 352, 373, 436, 870, 899, 941
RsaNI GTAC 7 cut(s) 339, 351, 372, 435, 869, 898, 940
RseI CAYNNNNRTG 1 cut(s) 156
SaqAI TTAA 3 cut(s) 186, 1287, 1305
SatI GCNGC 8 cut(s) 21, 633, 819, 993, 996, 999, 1101, 1184
Sau3AI GATC 6 cut(s) 286, 673, 835, 858, 1235, 1296
Sau96I GGNCC 7 cut(s) 232, 539, 667, 1004, 1082, 1196, 1265
SbfI CCTGCAGG 1 cut(s) 622
SchI GAGTC 3 cut(s) 337, 576, 774
ScrFI CCNGG 2 cut(s) 522, 1200
SdaI CCTGCAGG 1 cut(s) 622
SduI GDGCHC 2 cut(s) 889, 1229
SfaNI GCATC 5 cut(s) 79, 564, 966, 992, 1002
SfcI CTRYAG 1 cut(s) 618
SfuI TTCGAA 1 cut(s) 710
SgrAI CRCCGGYG 2 cut(s) 494, 910
SinI GGWCC 2 cut(s) 667, 1082
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 1 cut(s) 240
SmoI CTYRAG 1 cut(s) 240
Sse8387I CCTGCAGG 1 cut(s) 622
Sse9I AATT 4 cut(s) 61, 1147, 1154, 1191
SspMI CTAG 5 cut(s) 11, 318, 597, 929, 1245
StyD4I CCNGG 2 cut(s) 520, 1198
StyI CCWWGG 2 cut(s) 39, 952
TaaI ACNGT 3 cut(s) 140, 184, 569
TaiI ACGT 2 cut(s) 700, 1311
TaqI TCGA 1 cut(s) 710
TasI AATT 4 cut(s) 61, 1147, 1154, 1191
TatI WGTACW 2 cut(s) 868, 897
TauI GCSGC 5 cut(s) 635, 821, 995, 998, 1001
TfiI GAWTC 3 cut(s) 643, 841, 850
Tru1I TTAA 3 cut(s) 186, 1287, 1305
Tru9I TTAA 3 cut(s) 186, 1287, 1305
TscAI CASTG 6 cut(s) 187, 200, 487, 517, 574, 927
TseFI GTSAC 2 cut(s) 251, 1202
TseI GCWGC 3 cut(s) 20, 1100, 1183
Tsp45I GTSAC 2 cut(s) 251, 1202
TspDTI ATGAA 1 cut(s) 774
TspGWI ACGGA 1 cut(s) 575
TspRI CASTG 6 cut(s) 187, 200, 487, 517, 574, 927
VpaK11BI GGWCC 2 cut(s) 667, 1082
XbaI TCTAGA 1 cut(s) 928
XceI RCATGY 1 cut(s) 898
XspI CTAG 5 cut(s) 11, 318, 597, 929, 1245
ZraI GACGTC 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.