Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000145.1

Orthogroup ID

OG0004485

Physical Location & Seq

Genomic Coordinates Forward (+)

7557 .. 15232

Gene Structure 7676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

atggctctccttccaccaccagcttcgccttcctcccttgcttctttcattcctcgtcctccatctctcgccctaaaatccacaaccaacctcacatttcccaaacgtcgtcgttccgtatgcacagcttcatggcaagagcttgtcggagttgtggtattctcggcgattccattcaccgccgtgaaagccatagccaatagcgctctcggagagtcgctgcagcggcgattggaagaaaggaagaaagttgcggttgagaattcttccaggttcagggccttggcccaaaatgctcgaaatcggagcttgtggtatggagaagagcgtccccgctggcttggtcctatcccatatgattatccggcatatcttactggagaactacctggggattatggttttgatgttgtaggtctgagcaaggatccagtggctttccaaagatattttaactttgaaatactccatgcgcgttgggccatgctagctgcctttggtgctttggttccagaaattttagacctgttaggagcctttcactttgttgagcctgtatggtggcgagttggctattcaaagcttaagggagatacactggattaccttggcatcccaggactccacgtagctggaagccaaggagtaattgtcatagccatatgccaagtcctcctgatggttggaccagaatatgcaagatattgtggcattgaagcattagagccgctgggaatctacttgccaggtgatattaattacccaggaggagagcttttcgatcccttgaacctctcgaaagaccctgtagcttttgaagagctgaaggtgaaagagataaagaatgggcgcctagctatggttgcctggttgggcttttactgtcaagcagccttgacaggtaaaggtcctgtgcgtggactaccgccggattttcatacggatcgctgtcttaggaggatagggagtgccataggtcggtttgtgcagaaggacaccacagaatttgctgcaggacgaatccggattagggttgagatggacctgctgcagcctatcatctttcggcgtagcttcacggtagatgatggtattgtagtggatttggaattcttcttcgaaaatttgtatgggcggtgcaaggattgtggacttgtcactcatgttggcttaccgtgttcggaaactcctttgtcggcagagctgcaaactgatactcttttagcacgtcgaaatctggagcgggctttgaaccaagtcggagtgatacagccggctgggccaatgttggtttttggggcacagaataccccccaggttgggttagagaggtttatgccgactgttaaacctaaagtgaggaaagacatacgtcggaggccttctgttggcagtggagatggtagctctggggtgcagacagactcaaatgcgactgagcttgctggtggtagtgagcctaattctgatggctcaggtaaggggacagttggagcaagcaattcgacagatcatgcactgaatcctgcaatgcattctcctggtcgtggactgcgtcgtaagcgtgtggatgaggatgggatttctccaaagaaaatgagattgagcttggcagttggaagaacgaatctggatgctatgaccatgggtttgtgtaatgtgaaaccggctgagaaggtatacaagaagagaggtaggccgaaaggtacaaaaaacaaaacaaaggagttcaaggtggttcaagcttctcctatgaaaaagtctccatcaaagaagagtaagtctccacgaaaagtggaaaagttggtgaatggtttgccagaatttactttagttgaggttgtcaatggttctaacccgtctaatgggaaggaacctctagttgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009765 GO:0009768 GO:0009941 GO:0009987 GO:0010218 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019684 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0050896 GO:0055035 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00196 map00196

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

629

Amino Acids

68.87

Weight (kDa)

9.57

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chloroa_b-bind	PF00504	122 - 297	2.8e-42	Chlorophyll A-B binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004485)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76570
fragaria_vesca	FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480 FvH4_5g26480
malus_domestica	MD06G1001700.v1.1
prunus_persica	Prupe.5G002700_v2.0.a1 Prupe.5G002700_v2.0.a1
pyrus_communis	pycom06g00180
rosa_chinensis	RchiOBHm_Chr7g0217391
rosa_laevigata	RLG00000002481
rosa_multiflora	Rmu_co8208352.1_g000001 Rmu_sc0000145.1_g000001
rosa_roxburghii	Rroxscaffold_3G00242130 Rroxscaffold_3G00242220
rosa_rugosa	Rorug07G0168700 Rorug07G0168800
rosa_samantha	Rh7AG308400 Rh7BG299100 Rh7CG327700 Rh7DG307700
rosa_wichuraiana	Rw7G026150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1053
AccB1I	GGYRCC	1 cut(s)	849
AccBSI	CCGCTC	1 cut(s)	1243
AccI	GTMKAC	1 cut(s)	1680
AccII	CGCG	1 cut(s)	475
AccIII	TCCGGA	1 cut(s)	1023
AciI	CCGC	8 cut(s)	180, 226, 254, 334, 728, 926, 1135, 1243
AclWI	GGATC	4 cut(s)	422, 435, 776, 951
AcsI	RAATTY	6 cut(s)	262, 516, 1004, 1109, 1123, 1823
AcuI	CTGAAG	1 cut(s)	845
AcyI	GRCGYC	1 cut(s)	850
AfaI	GTAC	1 cut(s)	1708
AfeI	AGCGCT	1 cut(s)	205
AflII	CTTAAG	1 cut(s)	584
AgsI	TTSAA	8 cut(s)	461, 579, 716, 790, 818, 1252, 1732, 1742
AjiI	CACGTC	1 cut(s)	1229
AjnI	CCWGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
AleI	CACNNNNGTG	1 cut(s)	182
Alw26I	GTCTC	2 cut(s)	1767, 1788
AlwI	GGATC	4 cut(s)	422, 435, 776, 951
Aor13HI	TCCGGA	1 cut(s)	1023
Aor51HI	AGCGCT	1 cut(s)	205
AoxI	GGCC	6 cut(s)	279, 285, 480, 1280, 1379, 1697
ApeKI	GCWGC	8 cut(s)	220, 223, 491, 890, 1010, 1048, 1051, 1204
ApoI	RAATTY	6 cut(s)	262, 516, 1004, 1109, 1123, 1823
ArsI	GACNNNNNNTTYG	2 cut(s)	1633, 1665
AseI	ATTAAT	1 cut(s)	756
AspLEI	GCGC	3 cut(s)	206, 475, 852
AspS9I	GGNCC	8 cut(s)	279, 286, 344, 480, 686, 908, 1042, 1280
AsuHPI	GGTGA	4 cut(s)	169, 761, 841, 1819
AsuII	TTCGAA	1 cut(s)	1119
AsuNHI	GCTAGC	1 cut(s)	487
AvaII	GGWCC	4 cut(s)	344, 686, 908, 1042
BaeGI	GKGCMC	1 cut(s)	1303
BamHI	GGATCC	1 cut(s)	427
BanI	GGYRCC	1 cut(s)	849
BbvI	GCAGC	8 cut(s)	207, 235, 478, 902, 997, 1035, 1063, 1191
BccI	CCATC	8 cut(s)	70, 673, 1033, 1082, 1394, 1463, 1571, 1774
BceAI	ACGGC	1 cut(s)	167
BcgI	CGANNNNNNTGC	2 cut(s)	1485, 1519
BciT130I	CCWGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
BcoDI	GTCTC	2 cut(s)	1767, 1788
BfaI	CTAG	3 cut(s)	488, 854, 1880
BfmI	CTRYAG	4 cut(s)	221, 807, 1011, 1049
BfoI	RGCGCY	2 cut(s)	207, 853
BfrI	CTTAAG	1 cut(s)	584
BfuAI	ACCTGC	1 cut(s)	1053
BglI	GCCNNNNNGGC	1 cut(s)	1279
Bme1390I	CCNGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
Bme18I	GGWCC	4 cut(s)	344, 686, 908, 1042
BmgBI	CACGTC	1 cut(s)	1229
BmgT120I	GGNCC	8 cut(s)	279, 286, 344, 480, 686, 908, 1042, 1280
BmiI	GGNNCC	5 cut(s)	429, 510, 535, 851, 1875
BmrFI	CCNGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
BmsI	GCATC	2 cut(s)	621, 1624
BmtI	GCTAGC	1 cut(s)	491
BoxI	GACNNNNGTC	1 cut(s)	1371
BplI	GAGNNNNNCTC	2 cut(s)	1768, 1800
BpmI	CTGGAG	2 cut(s)	399, 1259
Bpu10I	CCTNAGC	1 cut(s)	1474
Bpu14I	TTCGAA	1 cut(s)	1119
BsaAI	YACGTR	1 cut(s)	628
BsaHI	GRCGYC	1 cut(s)	850
BsaJI	CCNNGG	8 cut(s)	282, 389, 607, 616, 640, 763, 1314, 1644
BsaWI	WCCGGW	1 cut(s)	1023
BsaXI	ACNNNNNCTCC	4 cut(s)	141, 171, 636, 666
Bse118I	RCCGGY	2 cut(s)	1273, 1666
Bse1I	ACTGG	3 cut(s)	382, 431, 603
Bse3DI	GCAATG	1 cut(s)	1536
BseAI	TCCGGA	1 cut(s)	1023
BseBI	CCWGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
BseDI	CCNNGG	8 cut(s)	282, 389, 607, 616, 640, 763, 1314, 1644
BseGI	GGATG	4 cut(s)	612, 1576, 1582, 1639
BseMI	GCAATG	1 cut(s)	1536
BseMII	CTCAG	4 cut(s)	410, 1428, 1488, 1662
BseNI	ACTGG	3 cut(s)	382, 431, 603
BseRI	GAGGAG	1 cut(s)	783
BseSI	GKGCMC	1 cut(s)	1303
BseXI	GCAGC	8 cut(s)	207, 235, 478, 902, 997, 1035, 1063, 1191
BseYI	CCCAGC	2 cut(s)	730, 1277
BsgI	GTGCAG	2 cut(s)	1007, 1436
Bsh1236I	CGCG	1 cut(s)	475
BshFI	GGCC	6 cut(s)	281, 287, 482, 1282, 1381, 1699
BshNI	GGYRCC	1 cut(s)	849
BsiSI	CCGG	5 cut(s)	365, 929, 1024, 1274, 1667
BslFI	GGGAC	2 cut(s)	315, 1498
BsmAI	GTCTC	2 cut(s)	1767, 1788
BsmFI	GGGAC	2 cut(s)	315, 1498
BsmI	GAATGC	1 cut(s)	1534
BsnI	GGCC	6 cut(s)	281, 287, 482, 1282, 1381, 1699
Bsp119I	TTCGAA	1 cut(s)	1119
Bsp1286I	GDGCHC	1 cut(s)	1303
Bsp13I	TCCGGA	1 cut(s)	1023
Bsp143I	GATC	4 cut(s)	427, 781, 943, 1510
Bsp19I	CCATGG	1 cut(s)	1644
BspACI	CCGC	8 cut(s)	180, 226, 254, 334, 728, 926, 1135, 1243
BspANI	GGCC	6 cut(s)	281, 287, 482, 1282, 1381, 1699
BspCNI	CTCAG	4 cut(s)	411, 1429, 1487, 1663
BspEI	TCCGGA	1 cut(s)	1023
BspFNI	CGCG	1 cut(s)	475
BspLI	GGNNCC	5 cut(s)	429, 510, 535, 851, 1875
BspMAI	CTGCAG	3 cut(s)	225, 1015, 1053
BspMI	ACCTGC	1 cut(s)	1053
BspOI	GCTAGC	1 cut(s)	491
BspPI	GGATC	4 cut(s)	422, 435, 776, 951
BspQI	GCTCTTC	2 cut(s)	318, 813
BspT104I	TTCGAA	1 cut(s)	1119
BspT107I	GGYRCC	1 cut(s)	849
BspTI	CTTAAG	1 cut(s)	584
BsrBI	CCGCTC	1 cut(s)	1243
BsrDI	GCAATG	1 cut(s)	1536
BsrFI	RCCGGY	2 cut(s)	1273, 1666
BsrI	ACTGG	3 cut(s)	382, 431, 603
BssAI	RCCGGY	2 cut(s)	1273, 1666
BssECI	CCNNGG	8 cut(s)	282, 389, 607, 616, 640, 763, 1314, 1644
BssMI	GATC	4 cut(s)	427, 781, 943, 1510
BssNAI	GTATAC	1 cut(s)	1681
BssNI	GRCGYC	1 cut(s)	850
BssT1I	CCWWGG	4 cut(s)	282, 607, 640, 1644
Bst1107I	GTATAC	1 cut(s)	1681
Bst2UI	CCWGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
Bst4CI	ACNGT	5 cut(s)	884, 1081, 1176, 1345, 1489
Bst6I	CTCTTC	4 cut(s)	318, 813, 1682, 1769
BstACI	GRCGYC	1 cut(s)	850
BstAFI	CTTAAG	1 cut(s)	584
BstBAI	YACGTR	1 cut(s)	628
BstBI	TTCGAA	1 cut(s)	1119
BstC8I	GCNNGC	6 cut(s)	338, 489, 1245, 1275, 1443, 1498
BstDEI	CTNAG	6 cut(s)	419, 953, 1437, 1474, 1671, 1887
BstDSI	CCRYGG	1 cut(s)	1644
BstF5I	GGATG	4 cut(s)	612, 1576, 1582, 1639
BstFNI	CGCG	1 cut(s)	475
BstH2I	RGCGCY	2 cut(s)	207, 853
BstHHI	GCGC	3 cut(s)	206, 475, 852
BstKTI	GATC	4 cut(s)	430, 784, 946, 1513
BstMAI	GTCTC	2 cut(s)	1767, 1788
BstMBI	GATC	4 cut(s)	427, 781, 943, 1510
BstNI	CCWGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
BstPAI	GACNNNNGTC	1 cut(s)	1371
BstSCI	CCNGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
BstSFI	CTRYAG	4 cut(s)	221, 807, 1011, 1049
BstSLI	GKGCMC	1 cut(s)	1303
BstUI	CGCG	1 cut(s)	475
BstV1I	GCAGC	8 cut(s)	207, 235, 478, 902, 997, 1035, 1063, 1191
BstX2I	RGATCY	1 cut(s)	427
BstXI	CCANNNNNNTGG	1 cut(s)	632
BstYI	RGATCY	1 cut(s)	427
BstZ17I	GTATAC	1 cut(s)	1681
BsuRI	GGCC	6 cut(s)	281, 287, 482, 1282, 1381, 1699
BtgI	CCRYGG	1 cut(s)	1644
BtrI	CACGTC	1 cut(s)	1229
BtsCI	GGATG	4 cut(s)	612, 1576, 1582, 1639
BtsI	GCAGTG	1 cut(s)	1399
BtsIMutI	CAGTG	4 cut(s)	438, 596, 1399, 1517
BveI	ACCTGC	1 cut(s)	1053
Cac8I	GCNNGC	6 cut(s)	338, 489, 1245, 1275, 1443, 1498
CfoI	GCGC	3 cut(s)	206, 475, 852
Cfr10I	RCCGGY	2 cut(s)	1273, 1666
Cfr13I	GGNCC	8 cut(s)	279, 286, 344, 480, 686, 908, 1042, 1280
CseI	GACGC	2 cut(s)	317, 1544
Csp6I	GTAC	1 cut(s)	1707
CspCI	CAANNNNNGTGG	4 cut(s)	988, 1023, 1129, 1164
CviAII	CATG	6 cut(s)	132, 470, 484, 1163, 1514, 1645
CviQI	GTAC	1 cut(s)	1707
DdeI	CTNAG	6 cut(s)	419, 953, 1437, 1474, 1671, 1887
DinI	GGCGCC	1 cut(s)	851
DpnI	GATC	4 cut(s)	429, 783, 945, 1512
DpnII	GATC	4 cut(s)	427, 781, 943, 1510
Eam1104I	CTCTTC	4 cut(s)	318, 813, 1682, 1769
EarI	CTCTTC	4 cut(s)	318, 813, 1682, 1769
Eco130I	CCWWGG	4 cut(s)	282, 607, 640, 1644
Eco147I	AGGCCT	1 cut(s)	1381
Eco47I	GGWCC	4 cut(s)	344, 686, 908, 1042
Eco47III	AGCGCT	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	845
EcoO109I	RGGNCCY	2 cut(s)	279, 908
EcoRI	GAATTC	2 cut(s)	262, 1109
EcoRII	CCWGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
EcoT14I	CCWWGG	4 cut(s)	282, 607, 640, 1644
EcoT22I	ATGCAT	1 cut(s)	1536
EgeI	GGCGCC	1 cut(s)	851
EheI	GGCGCC	1 cut(s)	851
ErhI	CCWWGG	4 cut(s)	282, 607, 640, 1644
FaeI	CATG	6 cut(s)	135, 473, 487, 1166, 1517, 1648
FaqI	GGGAC	2 cut(s)	315, 1498
FatI	CATG	6 cut(s)	131, 469, 483, 1162, 1513, 1644
FauI	CCCGC	2 cut(s)	341, 1236
FauNDI	CATATG	2 cut(s)	355, 662
FblI	GTMKAC	1 cut(s)	1680
FokI	GGATG	4 cut(s)	599, 1583, 1589, 1646
FspBI	CTAG	3 cut(s)	488, 854, 1880
GlaI	GCGC	3 cut(s)	205, 474, 851
GsaI	CCCAGC	2 cut(s)	734, 1281
GsuI	CTGGAG	2 cut(s)	399, 1259
HaeII	RGCGCY	2 cut(s)	207, 853
HaeIII	GGCC	6 cut(s)	281, 287, 482, 1282, 1381, 1699
HapII	CCGG	5 cut(s)	365, 929, 1024, 1274, 1667
HgaI	GACGC	2 cut(s)	317, 1544
HhaI	GCGC	3 cut(s)	206, 475, 852
Hin1I	GRCGYC	1 cut(s)	850
Hin1II	CATG	6 cut(s)	135, 473, 487, 1166, 1517, 1648
Hin6I	GCGC	3 cut(s)	204, 473, 850
HinP1I	GCGC	3 cut(s)	204, 473, 850
HindIII	AAGCTT	2 cut(s)	581, 1743
HinfI	GANTC	8 cut(s)	169, 215, 621, 735, 1020, 1424, 1522, 1627
HpaII	CCGG	5 cut(s)	365, 929, 1024, 1274, 1667
HphI	GGTGA	4 cut(s)	169, 761, 841, 1819
Hpy166II	GTNNAC	4 cut(s)	920, 1151, 1550, 1681
Hpy188I	TCNGA	8 cut(s)	149, 212, 306, 420, 1183, 1262, 1377, 1468
Hpy188III	TCNNGA	6 cut(s)	512, 676, 796, 1024, 1238, 1631
Hpy8I	GTNNAC	4 cut(s)	920, 1151, 1550, 1681
Hpy99I	CGWCG	5 cut(s)	111, 114, 1233, 1377, 1560
HpyAV	CCTTC	7 cut(s)	20, 39, 820, 985, 1392, 1669, 1864
HpyCH4III	ACNGT	5 cut(s)	884, 1081, 1176, 1345, 1489
HpyCH4IV	ACGT	4 cut(s)	106, 627, 1228, 1372
HpyF3I	CTNAG	6 cut(s)	419, 953, 1437, 1474, 1671, 1887
HpySE526I	ACGT	4 cut(s)	106, 627, 1228, 1372
Hsp92I	GRCGYC	1 cut(s)	850
Hsp92II	CATG	6 cut(s)	135, 473, 487, 1166, 1517, 1648
HspAI	GCGC	3 cut(s)	204, 473, 850
KasI	GGCGCC	1 cut(s)	849
Kpn2I	TCCGGA	1 cut(s)	1023
KroI	GCCGGC	1 cut(s)	1273
KroNI	GCCGGC	1 cut(s)	1275
Kzo9I	GATC	4 cut(s)	427, 781, 943, 1510
LguI	GCTCTTC	2 cut(s)	318, 813
LmnI	GCTCC	4 cut(s)	306, 533, 1240, 1493
Lsp1109I	GCAGC	8 cut(s)	207, 235, 478, 902, 997, 1035, 1063, 1191
LweI	GCATC	2 cut(s)	621, 1624
MaeI	CTAG	3 cut(s)	488, 854, 1880
MaeII	ACGT	4 cut(s)	106, 627, 1228, 1372
MaeIII	GTNAC	1 cut(s)	1156
MalI	GATC	4 cut(s)	429, 783, 945, 1512
MbiI	CCGCTC	1 cut(s)	1243
MboI	GATC	4 cut(s)	427, 781, 943, 1510
MflI	RGATCY	1 cut(s)	427
MhlI	GDGCHC	1 cut(s)	1303
Mly113I	GGCGCC	1 cut(s)	850
MlyI	GAGTC	3 cut(s)	224, 615, 1418
MmeI	TCCRAC	6 cut(s)	127, 664, 1240, 1355, 1471, 1597
Mph1103I	ATGCAT	1 cut(s)	1536
MroI	TCCGGA	1 cut(s)	1023
MroNI	GCCGGC	1 cut(s)	1273
MseI	TTAA	4 cut(s)	453, 585, 756, 1347
MslI	CAYNNNNRTG	1 cut(s)	182
MspA1I	CMGCKG	3 cut(s)	226, 336, 730
MspCI	CTTAAG	1 cut(s)	584
MspI	CCGG	5 cut(s)	365, 929, 1024, 1274, 1667
MspR9I	CCNGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
Mva1269I	GAATGC	1 cut(s)	1534
MvaI	CCWGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
MvnI	CGCG	1 cut(s)	475
NaeI	GCCGGC	1 cut(s)	1275
NarI	GGCGCC	1 cut(s)	850
NcoI	CCATGG	1 cut(s)	1644
NdeI	CATATG	2 cut(s)	355, 662
NdeII	GATC	4 cut(s)	427, 781, 943, 1510
NgoMIV	GCCGGC	1 cut(s)	1273
NheI	GCTAGC	1 cut(s)	487
NlaIII	CATG	6 cut(s)	135, 473, 487, 1166, 1517, 1648
NlaIV	GGNNCC	5 cut(s)	429, 510, 535, 851, 1875
NmeAIII	GCCGAG	1 cut(s)	143
NmuCI	GTSAC	1 cut(s)	1156
NsiI	ATGCAT	1 cut(s)	1536
NspV	TTCGAA	1 cut(s)	1119
OliI	CACNNNNGTG	1 cut(s)	182
PceI	AGGCCT	1 cut(s)	1381
PciSI	GCTCTTC	2 cut(s)	318, 813
PcsI	WCGNNNNNNNCGW	1 cut(s)	1552
PctI	GAATGC	1 cut(s)	1534
PdiI	GCCGGC	1 cut(s)	1275
PfeI	GAWTC	5 cut(s)	169, 735, 1020, 1522, 1627
PflFI	GACNNNGTC	1 cut(s)	1554
PleI	GAGTC	3 cut(s)	223, 615, 1418
PluTI	GGCGCC	1 cut(s)	853
PpsI	GAGTC	3 cut(s)	223, 615, 1418
Ppu21I	YACGTR	1 cut(s)	628
PpuMI	RGGWCCY	1 cut(s)	908
PshAI	GACNNNNGTC	1 cut(s)	1371
PshBI	ATTAAT	1 cut(s)	756
Psp5II	RGGWCCY	1 cut(s)	908
Psp6I	CCWGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
PspFI	CCCAGC	2 cut(s)	730, 1277
PspGI	CCWGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
PspN4I	GGNNCC	5 cut(s)	429, 510, 535, 851, 1875
PspPI	GGNCC	8 cut(s)	279, 286, 344, 480, 686, 908, 1042, 1280
PspPPI	RGGWCCY	1 cut(s)	908
PstI	CTGCAG	3 cut(s)	225, 1015, 1053
PsuI	RGATCY	1 cut(s)	427
PsyI	GACNNNGTC	1 cut(s)	1554
RsaI	GTAC	1 cut(s)	1708
RsaNI	GTAC	1 cut(s)	1707
RseI	CAYNNNNRTG	1 cut(s)	182
SapI	GCTCTTC	2 cut(s)	318, 813
SaqAI	TTAA	4 cut(s)	453, 585, 756, 1347
Sau3AI	GATC	4 cut(s)	427, 781, 943, 1510
Sau96I	GGNCC	8 cut(s)	279, 286, 344, 480, 686, 908, 1042, 1280
SchI	GAGTC	3 cut(s)	224, 615, 1418
ScrFI	CCNGG	8 cut(s)	271, 390, 618, 747, 765, 868, 1316, 1542
SduI	GDGCHC	1 cut(s)	1303
SfaNI	GCATC	2 cut(s)	621, 1624
SfcI	CTRYAG	4 cut(s)	221, 807, 1011, 1049
SfoI	GGCGCC	1 cut(s)	851
SfuI	TTCGAA	1 cut(s)	1119
SinI	GGWCC	4 cut(s)	344, 686, 908, 1042
SmiMI	CAYNNNNRTG	1 cut(s)	182
SmlI	CTYRAG	1 cut(s)	584
SmoI	CTYRAG	1 cut(s)	584
SseBI	AGGCCT	1 cut(s)	1381
SsiI	CCGC	8 cut(s)	180, 226, 254, 334, 728, 926, 1135, 1243
SspDI	GGCGCC	1 cut(s)	849
SspMI	CTAG	3 cut(s)	488, 854, 1880
StuI	AGGCCT	1 cut(s)	1381
StyD4I	CCNGG	8 cut(s)	269, 388, 616, 745, 763, 866, 1314, 1540
StyI	CCWWGG	4 cut(s)	282, 607, 640, 1644
TaaI	ACNGT	5 cut(s)	884, 1081, 1176, 1345, 1489
TaiI	ACGT	4 cut(s)	109, 630, 1231, 1375
TaqI	TCGA	6 cut(s)	298, 780, 797, 1119, 1231, 1505
TauI	GCSGC	2 cut(s)	229, 730
TfiI	GAWTC	5 cut(s)	169, 735, 1020, 1522, 1627
Tru1I	TTAA	4 cut(s)	453, 585, 756, 1347
Tru9I	TTAA	4 cut(s)	453, 585, 756, 1347
TscAI	CASTG	4 cut(s)	438, 603, 1399, 1524
TseFI	GTSAC	1 cut(s)	1156
TseI	GCWGC	8 cut(s)	220, 223, 491, 890, 1010, 1048, 1051, 1204
Tsp45I	GTSAC	1 cut(s)	1156
TspDTI	ATGAA	4 cut(s)	37, 120, 926, 1769
TspGWI	ACGGA	2 cut(s)	106, 956
TspRI	CASTG	4 cut(s)	438, 603, 1399, 1524
Tth111I	GACNNNGTC	1 cut(s)	1554
Vha464I	CTTAAG	1 cut(s)	584
VpaK11BI	GGWCC	4 cut(s)	344, 686, 908, 1042
VspI	ATTAAT	1 cut(s)	756
XapI	RAATTY	6 cut(s)	262, 516, 1004, 1109, 1123, 1823
XmiI	GTMKAC	1 cut(s)	1680
XspI	CTAG	3 cut(s)	488, 854, 1880
Zsp2I	ATGCAT	1 cut(s)	1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.