Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000283.1

Orthogroup ID

OG0013120

Physical Location & Seq

Genomic Coordinates Reverse (-)

41997 .. 44316

Gene Structure 2320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

atgcaaagtgggttgtgccactccacattattggccgccaataatatgagttgctcaaccacggtggctatagggaactcagtattcccgccaaattcaaacacaaaatccagaaattcccaaaatcggagagaagtcatctccctgttgcagaaatgcaaacactatcagatcccacaaatacatgctaaaataataagaaatggccaggaccaagacccattcgtcgtcttcgagcttcttcgtctctgctccaacctcaactccattgactatgcctccaaggttttccgacgcacccaatccccaaacgtgtatctctacactgctctcattgacgggtttgtgtcgtctggctattaccttgatgggattcgtctttactgtcagatggtcaatgagtttatatttccggacaaatatgccatcacttctgtgttgaaagcttgtggctttgggttggctttggaggagggcagagaagtccatgcccaggctttgaagcttgggttgtcctcgaatagatcaataaggatgaagctgatgggtctttatgggaagtgtggtgaatttgaaagtgcacgccaggtgtttgatgaaatgcctgaaggggatgcagttgcggcaaccgtcatgataacttgttatgctgagtatggactagttgaggaggcgagtggtgtttttaaccggctcagggaaaaggatacggtttgctggactgcgatgattgatgggttggttaagaatggggagatgaatagggctttggaggtgtttagggatatgcagaggaagaatgtgaggcctaatgaagttacattggtttgtgttctgtctgcttgttcgcatttgggagctttggagctcggacgatgggtttgctcgtatatagataagaataacattgaatgcaattacattgtgggtggtgctctgattaatatgtattcaaggtgtggtgatattgatggggcagtagaggtgtttagcaggatgaaaaagagagatgtcagtacgtataattccatgattgaggggcttgctatgcatgggaagagcaccatggctattgaaatgttccgggaaatgatgaaacgaggacttaagccaaatagcattacttttgttaaagtattaaatgcatgtagactgataattaagtgcttctcggatcctcaatactacttccaagtgaatgcgcactatgtcaggaacaaactgaagataattctatttccatttcttcacaggggacactggaccaggataacagagccaattggaggcaggctttcctataatcctccaattaatgatataaatgctccagatttatacattccattcatgacatttgcgacatacttggttcttgctggcatctctctcggcctttctgggaaatttagtccagaagccttaaattggcagtttgtgaaaggaatggcaagctggttattccaagcaatgttgttgaaggcatcattgacttcgctaggcggtggagaggcaccattgttggacatgatagcatatgctgggtatacattcacggggctgtgtgtggctgttgtagggagaattacattaagctatgcgtactacttgatagtcatatggacatccatgtgctcaggcatcttcttggctaagacgattaagctaactttgtatgccgaggctaggagttacgatgtcaccatccacaactatctcttgcttggtattgcattttctccattcccattcatcttctgcctgagcaaccctaccgggaattggatttcctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

597

Amino Acids

66.9

Weight (kDa)

8.82

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	103 - 150	4.6e-07	PPR repeat family
PPR_2	PF13041	235 - 283	3.1e-14	PPR repeat family
PPR_1	PF12854	236 - 264	1e-05	PPR repeat
PPR	PF01535	238 - 268	1.7e-08	PPR repeat
PPR_2	PF13041	336 - 383	3e-13	PPR repeat family
PPR_3	PF13812	336 - 383	1.7e-07	Pentatricopeptide repeat domain
PPR	PF01535	339 - 369	9.9e-08	PPR repeat
YIF1	PF03878	390 - 566	8.7e-46	YIF1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59200
fragaria_vesca	FvH4_2g17580
malus_domestica	MD10G1149200.v1.1 MD10G1149700.v1.1
prunus_persica	Prupe.8G188000_v2.0.a1
pyrus_communis	pycom10g12880 pycom10g12910
rosa_chinensis	RchiOBHm_Chr6g0282521
rosa_laevigata	RLG00000012888
rosa_multiflora	Rmu_sc0000283.1_g000009 Rmu_sc0000283.1_g000011 Rmu_sc0000283.1_g000012 Rmu_sc0005697.1_g000029
rosa_rugosa	Rorug06G0147100 Rorug06G0147200
rosa_samantha	Rh6CG262700 Rh6DG254600
rosa_wichuraiana	Rw6G022520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	224
Acc16I	TGCGCA	1 cut(s)	1203
AccB1I	GGYRCC	1 cut(s)	1513
AccI	GTMKAC	2 cut(s)	1150, 1547
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	4 cut(s)	36, 89, 623, 1503
AclWI	GGATC	3 cut(s)	166, 1169, 1182
AcoI	YGGCCR	2 cut(s)	33, 205
AcsI	RAATTY	4 cut(s)	94, 115, 569, 1406
AcuI	CTGAAG	2 cut(s)	627, 1244
AfaI	GTAC	2 cut(s)	1018, 1604
AfiI	CCNNNNNNNGG	7 cut(s)	126, 493, 697, 1286, 1428, 1686, 1782
AflII	CTTAAG	1 cut(s)	1106
AflIII	ACRYGT	1 cut(s)	312
AgsI	TTSAA	8 cut(s)	99, 442, 502, 575, 911, 954, 1076, 1480
AhlI	ACTAGT	1 cut(s)	661
AjnI	CCWGG	4 cut(s)	207, 492, 585, 1265
AjuI	GAANNNNNNNTTGG	2 cut(s)	752, 784
AleI	CACNNNNGTG	1 cut(s)	434
AluBI	AGCT	9 cut(s)	238, 446, 505, 541, 860, 868, 1455, 1596, 1666
AluI	AGCT	9 cut(s)	238, 446, 505, 541, 860, 868, 1455, 1596, 1666
Alw21I	GWGCWC	5 cut(s)	583, 870, 937, 1064, 1637
Alw26I	GTCTC	1 cut(s)	251
Alw44I	GTGCAC	1 cut(s)	579
AlwI	GGATC	3 cut(s)	166, 1169, 1182
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	4 cut(s)	33, 205, 806, 1393
ApaLI	GTGCAC	1 cut(s)	579
ApoI	RAATTY	4 cut(s)	94, 115, 569, 1406
ArsI	GACNNNNNNTTYG	2 cut(s)	864, 896
AseI	ATTAAT	2 cut(s)	942, 1314
AspLEI	GCGC	1 cut(s)	1204
AspS9I	GGNCC	2 cut(s)	211, 1263
AsuC2I	CCSGG	2 cut(s)	1085, 1777
AsuHPI	GGTGA	3 cut(s)	578, 974, 1693
AvaII	GGWCC	2 cut(s)	211, 1263
BaeGI	GKGCMC	1 cut(s)	583
BalI	TGGCCA	1 cut(s)	207
BamHI	GGATCC	1 cut(s)	1174
BanI	GGYRCC	1 cut(s)	1513
BanII	GRGCYC	1 cut(s)	870
BbsI	GAAGAC	1 cut(s)	223
Bbv12I	GWGCWC	5 cut(s)	583, 870, 937, 1064, 1637
BccI	CCATC	8 cut(s)	362, 385, 434, 538, 728, 870, 965, 1712
BcgI	CGANNNNNNTGC	4 cut(s)	864, 898, 1372, 1406
BciT130I	CCWGG	4 cut(s)	209, 494, 587, 1267
BciVI	GTATCC	1 cut(s)	700
BcnI	CCSGG	2 cut(s)	1085, 1777
BcoDI	GTCTC	1 cut(s)	251
BcuI	ACTAGT	1 cut(s)	661
BfaI	CTAG	3 cut(s)	662, 1499, 1686
BfmI	CTRYAG	1 cut(s)	69
BfrI	CTTAAG	1 cut(s)	1106
BfuI	GTATCC	1 cut(s)	700
BisI	GCNGC	2 cut(s)	36, 624
BlsI	GCNGC	2 cut(s)	37, 625
Bme1390I	CCNGG	6 cut(s)	209, 494, 587, 1085, 1267, 1777
Bme18I	GGWCC	2 cut(s)	211, 1263
BmgT120I	GGNCC	2 cut(s)	211, 1263
BmiI	GGNNCC	2 cut(s)	1176, 1515
BmrFI	CCNGG	6 cut(s)	209, 494, 587, 1085, 1267, 1777
BmsI	GCATC	4 cut(s)	604, 1392, 1493, 1650
BpiI	GAAGAC	1 cut(s)	223
BpmI	CTGGAG	1 cut(s)	1314
Bpu10I	CCTNAGC	3 cut(s)	695, 1636, 1763
BpuMI	CCSGG	2 cut(s)	1085, 1777
BsaAI	YACGTR	1 cut(s)	1020
BsaJI	CCNNGG	5 cut(s)	60, 282, 492, 1065, 1680
BsaWI	WCCGGW	1 cut(s)	412
BsaXI	ACNNNNNCTCC	4 cut(s)	248, 263, 278, 293
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 493, 697, 1286, 1428, 1686, 1782
Bse118I	RCCGGY	1 cut(s)	690
Bse1I	ACTGG	1 cut(s)	1265
Bse3DI	GCAATG	1 cut(s)	1476
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	4 cut(s)	209, 494, 587, 1267
BseDI	CCNNGG	5 cut(s)	60, 282, 492, 1065, 1680
BseGI	GGATG	5 cut(s)	540, 619, 1002, 1625, 1704
BseLI	CCNNNNNNNGG	7 cut(s)	126, 493, 697, 1286, 1428, 1686, 1782
BseMI	GCAATG	1 cut(s)	1476
BseMII	CTCAG	5 cut(s)	93, 642, 709, 1650, 1754
BseNI	ACTGG	1 cut(s)	1265
BseRI	GAGGAG	2 cut(s)	485, 683
BseSI	GKGCMC	1 cut(s)	583
BseYI	CCCAGC	1 cut(s)	1541
BshFI	GGCC	4 cut(s)	35, 207, 808, 1395
BshNI	GGYRCC	1 cut(s)	1513
BsiHKAI	GWGCWC	5 cut(s)	583, 870, 937, 1064, 1637
BsiSI	CCGG	4 cut(s)	413, 691, 1084, 1776
BslFI	GGGAC	1 cut(s)	1269
BslI	CCNNNNNNNGG	7 cut(s)	126, 493, 697, 1286, 1428, 1686, 1782
BsmAI	GTCTC	1 cut(s)	251
BsmBI	CGTCTC	1 cut(s)	251
BsmFI	GGGAC	1 cut(s)	1269
BsmI	GAATGC	2 cut(s)	917, 1204
BsnI	GGCC	4 cut(s)	35, 207, 808, 1395
Bsp1286I	GDGCHC	5 cut(s)	583, 870, 937, 1064, 1637
Bsp13I	TCCGGA	1 cut(s)	412
Bsp143I	GATC	3 cut(s)	171, 524, 1174
Bsp19I	CCATGG	1 cut(s)	1065
BspACI	CCGC	4 cut(s)	36, 89, 623, 1503
BspANI	GGCC	4 cut(s)	35, 207, 808, 1395
BspCNI	CTCAG	5 cut(s)	92, 643, 708, 1649, 1755
BspEI	TCCGGA	1 cut(s)	412
BspHI	TCATGA	2 cut(s)	633, 1350
BspLI	GGNNCC	2 cut(s)	1176, 1515
BspPI	GGATC	3 cut(s)	166, 1169, 1182
BspQI	GCTCTTC	1 cut(s)	1052
BspT107I	GGYRCC	1 cut(s)	1513
BspTI	CTTAAG	1 cut(s)	1106
BsrDI	GCAATG	1 cut(s)	1476
BsrFI	RCCGGY	1 cut(s)	690
BsrI	ACTGG	1 cut(s)	1265
BssAI	RCCGGY	1 cut(s)	690
BssECI	CCNNGG	5 cut(s)	60, 282, 492, 1065, 1680
BssMI	GATC	3 cut(s)	171, 524, 1174
BssNAI	GTATAC	1 cut(s)	1548
BssT1I	CCWWGG	2 cut(s)	282, 1065
Bst1107I	GTATAC	1 cut(s)	1548
Bst2UI	CCWGG	4 cut(s)	209, 494, 587, 1267
Bst4CI	ACNGT	4 cut(s)	64, 386, 631, 712
Bst6I	CTCTTC	1 cut(s)	1052
BstAFI	CTTAAG	1 cut(s)	1106
BstBAI	YACGTR	1 cut(s)	1020
BstC8I	GCNNGC	5 cut(s)	583, 1044, 1292, 1381, 1453
BstDEI	CTNAG	6 cut(s)	79, 651, 695, 1636, 1653, 1763
BstDSI	CCRYGG	2 cut(s)	60, 1065
BstF5I	GGATG	5 cut(s)	540, 619, 1002, 1625, 1704
BstHHI	GCGC	1 cut(s)	1204
BstKTI	GATC	3 cut(s)	174, 527, 1177
BstMAI	GTCTC	1 cut(s)	251
BstMBI	GATC	3 cut(s)	171, 524, 1174
BstMWI	GCNNNNNNNGC	2 cut(s)	623, 1048
BstNI	CCWGG	4 cut(s)	209, 494, 587, 1267
BstNSI	RCATGY	2 cut(s)	188, 1149
BstSCI	CCNGG	6 cut(s)	207, 492, 585, 1083, 1265, 1775
BstSFI	CTRYAG	1 cut(s)	69
BstSLI	GKGCMC	1 cut(s)	583
BstSNI	TACGTA	1 cut(s)	1020
BstV2I	GAAGAC	1 cut(s)	223
BstX2I	RGATCY	2 cut(s)	171, 1174
BstXI	CCANNNNNNTGG	1 cut(s)	31
BstYI	RGATCY	2 cut(s)	171, 1174
BstZ17I	GTATAC	1 cut(s)	1548
BsuI	GTATCC	1 cut(s)	700
BsuRI	GGCC	4 cut(s)	35, 207, 808, 1395
BtgI	CCRYGG	2 cut(s)	60, 1065
BtgZI	GCGATG	1 cut(s)	740
BtsCI	GGATG	5 cut(s)	540, 619, 1002, 1625, 1704
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	2 cut(s)	324, 1258
Cac8I	GCNNGC	5 cut(s)	583, 1044, 1292, 1381, 1453
CciI	TCATGA	2 cut(s)	633, 1350
CfoI	GCGC	1 cut(s)	1204
Cfr10I	RCCGGY	1 cut(s)	690
Cfr13I	GGNCC	2 cut(s)	211, 1263
CseI	GACGC	1 cut(s)	303
Csp6I	GTAC	2 cut(s)	1017, 1603
CspCI	CAANNNNNGTGG	2 cut(s)	45, 80
CviQI	GTAC	2 cut(s)	1017, 1603
DdeI	CTNAG	6 cut(s)	79, 651, 695, 1636, 1653, 1763
DpnI	GATC	3 cut(s)	173, 526, 1176
DpnII	GATC	3 cut(s)	171, 524, 1174
DrdI	GACNNNNNNGTC	1 cut(s)	224
DseDI	GACNNNNNNGTC	1 cut(s)	224
EaeI	YGGCCR	2 cut(s)	33, 205
Eam1104I	CTCTTC	1 cut(s)	1052
EarI	CTCTTC	1 cut(s)	1052
Ecl136II	GAGCTC	1 cut(s)	868
Eco105I	TACGTA	1 cut(s)	1020
Eco130I	CCWWGG	2 cut(s)	282, 1065
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	1 cut(s)	870
Eco47I	GGWCC	2 cut(s)	211, 1263
Eco53kI	GAGCTC	1 cut(s)	868
Eco57I	CTGAAG	2 cut(s)	627, 1244
EcoICRI	GAGCTC	1 cut(s)	868
EcoRII	CCWGG	4 cut(s)	207, 492, 585, 1265
EcoT14I	CCWWGG	2 cut(s)	282, 1065
EcoT22I	ATGCAT	2 cut(s)	1053, 1147
EcoT38I	GRGCYC	1 cut(s)	870
ErhI	CCWWGG	2 cut(s)	282, 1065
Esp3I	CGTCTC	1 cut(s)	251
FaqI	GGGAC	1 cut(s)	1269
FauI	CCCGC	1 cut(s)	96
FauNDI	CATATG	2 cut(s)	1537, 1619
FblI	GTMKAC	2 cut(s)	1150, 1547
Fnu4HI	GCNGC	2 cut(s)	36, 624
FokI	GGATG	5 cut(s)	547, 626, 1009, 1612, 1691
FriOI	GRGCYC	1 cut(s)	870
Fsp4HI	GCNGC	2 cut(s)	36, 624
FspAI	RTGCGCAY	1 cut(s)	1203
FspBI	CTAG	3 cut(s)	662, 1499, 1686
FspI	TGCGCA	1 cut(s)	1203
GlaI	GCGC	1 cut(s)	1203
GluI	GCNGC	2 cut(s)	36, 624
GsaI	CCCAGC	1 cut(s)	1545
GsuI	CTGGAG	1 cut(s)	1314
HaeIII	GGCC	4 cut(s)	35, 207, 808, 1395
HapII	CCGG	4 cut(s)	413, 691, 1084, 1776
HgaI	GACGC	1 cut(s)	303
HhaI	GCGC	1 cut(s)	1204
Hin6I	GCGC	1 cut(s)	1202
HinP1I	GCGC	1 cut(s)	1202
HindIII	AAGCTT	2 cut(s)	444, 503
HinfI	GANTC	1 cut(s)	373
HpaII	CCGG	4 cut(s)	413, 691, 1084, 1776
HphI	GGTGA	3 cut(s)	578, 974, 1693
Hpy166II	GTNNAC	3 cut(s)	581, 1151, 1548
Hpy188I	TCNGA	7 cut(s)	129, 171, 293, 390, 872, 939, 1174
Hpy188III	TCNNGA	8 cut(s)	111, 413, 634, 1213, 1331, 1351, 1415, 1791
Hpy8I	GTNNAC	3 cut(s)	581, 1151, 1548
Hpy99I	CGWCG	2 cut(s)	230, 297
HpyAV	CCTTC	2 cut(s)	602, 1474
HpyCH4III	ACNGT	4 cut(s)	64, 386, 631, 712
HpyCH4IV	ACGT	2 cut(s)	312, 1019
HpyF10VI	GCNNNNNNNGC	2 cut(s)	623, 1048
HpyF3I	CTNAG	6 cut(s)	79, 651, 695, 1636, 1653, 1763
HpySE526I	ACGT	2 cut(s)	312, 1019
HspAI	GCGC	1 cut(s)	1202
Kpn2I	TCCGGA	1 cut(s)	412
Kzo9I	GATC	3 cut(s)	171, 524, 1174
LguI	GCTCTTC	1 cut(s)	1052
LmnI	GCTCC	4 cut(s)	257, 857, 865, 1333
LweI	GCATC	4 cut(s)	604, 1392, 1493, 1650
MaeI	CTAG	3 cut(s)	662, 1499, 1686
MaeII	ACGT	2 cut(s)	312, 1019
MaeIII	GTNAC	3 cut(s)	817, 1691, 1699
MalI	GATC	3 cut(s)	173, 526, 1176
MboI	GATC	3 cut(s)	171, 524, 1174
MboII	GAAGA	8 cut(s)	223, 233, 808, 1069, 1237, 1238, 1636, 1747
MfeI	CAATTG	1 cut(s)	1281
MflI	RGATCY	2 cut(s)	171, 1174
MhlI	GDGCHC	5 cut(s)	583, 870, 937, 1064, 1637
MlsI	TGGCCA	1 cut(s)	207
MluNI	TGGCCA	1 cut(s)	207
MmeI	TCCRAC	3 cut(s)	279, 316, 1503
Mox20I	TGGCCA	1 cut(s)	207
Mph1103I	ATGCAT	2 cut(s)	1053, 1147
MroI	TCCGGA	1 cut(s)	412
MscI	TGGCCA	1 cut(s)	207
MslI	CAYNNNNRTG	2 cut(s)	434, 1630
Msp20I	TGGCCA	1 cut(s)	207
MspCI	CTTAAG	1 cut(s)	1106
MspI	CCGG	4 cut(s)	413, 691, 1084, 1776
MspR9I	CCNGG	6 cut(s)	209, 494, 587, 1085, 1267, 1777
MunI	CAATTG	1 cut(s)	1281
Mva1269I	GAATGC	2 cut(s)	917, 1204
MvaI	CCWGG	4 cut(s)	209, 494, 587, 1267
MwoI	GCNNNNNNNGC	2 cut(s)	623, 1048
NciI	CCSGG	2 cut(s)	1085, 1777
NcoI	CCATGG	1 cut(s)	1065
NdeI	CATATG	2 cut(s)	1537, 1619
NdeII	GATC	3 cut(s)	171, 524, 1174
NlaIV	GGNNCC	2 cut(s)	1176, 1515
NmeAIII	GCCGAG	2 cut(s)	1371, 1705
NmuCI	GTSAC	1 cut(s)	1699
NsbI	TGCGCA	1 cut(s)	1203
NsiI	ATGCAT	2 cut(s)	1053, 1147
NspI	RCATGY	2 cut(s)	188, 1149
OliI	CACNNNNGTG	1 cut(s)	434
PagI	TCATGA	2 cut(s)	633, 1350
PceI	AGGCCT	1 cut(s)	808
PciSI	GCTCTTC	1 cut(s)	1052
PcsI	WCGNNNNNNNCGW	1 cut(s)	231
PctI	GAATGC	2 cut(s)	917, 1204
PfeI	GAWTC	1 cut(s)	373
PfoI	TCCNGGA	1 cut(s)	1083
PkrI	GCNGC	2 cut(s)	37, 625
Ppu21I	YACGTR	1 cut(s)	1020
PshBI	ATTAAT	2 cut(s)	942, 1314
Psp124BI	GAGCTC	1 cut(s)	870
Psp6I	CCWGG	4 cut(s)	207, 492, 585, 1265
PspFI	CCCAGC	1 cut(s)	1541
PspGI	CCWGG	4 cut(s)	207, 492, 585, 1265
PspN4I	GGNNCC	2 cut(s)	1176, 1515
PspPI	GGNCC	2 cut(s)	211, 1263
PsuI	RGATCY	2 cut(s)	171, 1174
RsaI	GTAC	2 cut(s)	1018, 1604
RsaNI	GTAC	2 cut(s)	1017, 1603
RseI	CAYNNNNRTG	2 cut(s)	434, 1630
SacI	GAGCTC	1 cut(s)	870
SapI	GCTCTTC	1 cut(s)	1052
SatI	GCNGC	2 cut(s)	36, 624
Sau3AI	GATC	3 cut(s)	171, 524, 1174
Sau96I	GGNCC	2 cut(s)	211, 1263
ScrFI	CCNGG	6 cut(s)	209, 494, 587, 1085, 1267, 1777
SduI	GDGCHC	5 cut(s)	583, 870, 937, 1064, 1637
SfaNI	GCATC	4 cut(s)	604, 1392, 1493, 1650
SfcI	CTRYAG	1 cut(s)	69
SinI	GGWCC	2 cut(s)	211, 1263
SmiMI	CAYNNNNRTG	2 cut(s)	434, 1630
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SnaBI	TACGTA	1 cut(s)	1020
SpeI	ACTAGT	1 cut(s)	661
SseBI	AGGCCT	1 cut(s)	808
SsiI	CCGC	4 cut(s)	36, 89, 623, 1503
SspMI	CTAG	3 cut(s)	662, 1499, 1686
SstI	GAGCTC	1 cut(s)	870
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	6 cut(s)	207, 492, 585, 1083, 1265, 1775
StyI	CCWWGG	2 cut(s)	282, 1065
TaaI	ACNGT	4 cut(s)	64, 386, 631, 712
TaiI	ACGT	2 cut(s)	315, 1022
TaqI	TCGA	2 cut(s)	234, 518
TauI	GCSGC	2 cut(s)	38, 626
TfiI	GAWTC	1 cut(s)	373
TscAI	CASTG	2 cut(s)	331, 1265
TseFI	GTSAC	1 cut(s)	1699
Tsp45I	GTSAC	1 cut(s)	1699
TspDTI	ATGAA	8 cut(s)	551, 612, 773, 828, 1013, 1109, 1339, 1741
TspRI	CASTG	2 cut(s)	331, 1265
Vha464I	CTTAAG	1 cut(s)	1106
VneI	GTGCAC	1 cut(s)	579
VpaK11BI	GGWCC	2 cut(s)	211, 1263
VspI	ATTAAT	2 cut(s)	942, 1314
XapI	RAATTY	4 cut(s)	94, 115, 569, 1406
XceI	RCATGY	2 cut(s)	188, 1149
XmiI	GTMKAC	2 cut(s)	1150, 1547
XspI	CTAG	3 cut(s)	662, 1499, 1686
Zsp2I	ATGCAT	2 cut(s)	1053, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.