Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000328.1

Orthogroup ID

OG0005660

Physical Location & Seq

Genomic Coordinates Reverse (-)

76759 .. 89769

Gene Structure 13011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000328.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3198 bp

atgggagaagcaccagtgctaactgccacattagtaggtgaagcatcctccaaattcacccgacgatttccaagtaccacttccatttttgataccaacgcttacagtgccgctcatccaaccccgatttcgttgctgaagttgaacaagaagcctggttctcagtctgccttcatcagaaagaagtgtactaagttggttacgaaaagtttgatatccaaaatggctggtgatcaagggacgccagccactgcagatgtcacttcaggagatatgattttcgggcctattattgaggatggtgtgttccgatttgattgttctgcaaatgatagagaagcagcacatcctagtctctcttttgtgaatggcaaggatagggagacaccgattcagagtcaaacgatgccgtcctatatcccaatttttgaacgtcttcttggccagcagattgttaaacttgagcttcctgttggtacctctttatacggcactggggaggttagtgggcaacttgagcggacaggaaaaagagtttttacttggaattcggatgcatggggctatggttctggaactacgtcattgtaccagtcacatccttgggtgctagctgttcttccttctggagaggcattaggagttcttgctgatacaacaaagcgttgtgagattgatttaagaaaagaatctttgatacggttcatcgctccatcctcttatcctgtcattacttttggtccatttgctacacccaatgctgttttgagagctttatcacgtgcaattggtactgtatttatgcccccaaagtggtccttgggttatcaacaatgtcgctggagctatgactctgataagagagttcaagaggttacaagaacttttcgggagaaaaagattccttgtgatgtcgtatggatggatattgattatatggatggttttcgttgtttcacttttgacaaggaccattttcaagatccaaaatccttggtgaaggatctccaccaaaatggtttcaaggcaatatggatgcttgacccagggataaaagtggaagatggttattttgtgtatgatagtggttctaaaactgatgcctggatttcgaaagcagatggaaaaccttttgttggggaggtgtggcctgggccttgtgttttcccagactttacacaggcaaaagttcgatcgtggtggtccaatttagtcaaagatttcatttgtaatggtgttgatggtatatggaatgacatgaatgaacctgctgtttttaaggttgtcacaaaaacaatgcctgagagcaatatccataagggggatgatgaactgggaggctgccagaatcactcacactaccacaatgtctatgggttgctgatggcaagatcaacttatgaagggatgaaattgggtaatgcaaagaaacgtccttttgtcctcacgagagctggatttattggtagccagcggtatgctgcaacatggactggagacaatctttcaacttgggaacacctgcatatgagtattcccatggtacttcaattgggacttagtggtcagccactgtcggggcctgatattggtggctttgctggaaatgcaacacctgagctctttggaagatgggtgggtataggttctctgtttcccttttgccgtgggcactctgaaaaggacaccgctgaccatgagccgtggtcttttggggaagagtgtgaagaagtatgccgcttggcattgaggaggcgctaccgtcttatacctcatttatacactctcttctatatggctcatacgacgggtactccagtggcaagtcctacattttttgctgatcccaaagataccagcttaaggaaactggagacttcttttttgttgggtccaattctagtgtatgcaagcactgcggttggtcgggggttggatgctttgcagtgcacattgcccaaaggaatctggatatgtttcgattttgatgattcacatccagatttaccagcattatatttgcaaggtggagcaattattcctgtgggtcctcctcatcagcatgttggtgaatctaatatattagatgacttgacactccttgtggctttaaatgaacatgggaaagctgaaggtgttttatatgaagatgatggtgatggatatgaattcctggaaggaggattcttgttgacacactatgttgctgaacttcaatcatcaacacttactctcaaaatttcaaaaactgaaggatcttggaagaggccaaaccgtcgcttgcatgtgcaattattgcttggtggaggtgccatggttgatatatggggtaaggatggagagattcttcaactttcaatgccttcagaacaggaggtctcacagctggtttctaccagtgagaaacagtacagaactcgtttggaaaatgccaagcgtattccagcagtagaagtgagttctgcgcagaaaggaatagagctttcaaggacgcctattgaattgaaaggtggtgattgggttattaaagtagtgccctggattggtggtcgaatcatttccatgactcaccttccttcagggacacagtggcttcacagtagggttgatattaatggttatgaagaatatagtggtaccgagtaccgctctgctggatgttctgaggaatacaatgttattgaacgaaatctcgagcatgccgggggggaggaatctctcatgttagaaggtgatatagggggtggattggttctccaacgacagttatatattccaaagaatgatcccaaggttttccggatcgactctagcattatagcacgcaaagttggtgctggttctggtggatattcaagactggtatgcttgagagtacacccgatgttcaccctgttgcacccctcagaatctcatgtttcatttacggctattgacgggtcaaagcatgaaattgggcccgaatctaacgagcagttctatgaagggaatttaatgcctaatggtgaatggatgctcattgataaatgccttggcttggggttattgaatcggtttgatgtcagtcaggttttcaagtgcctaatccactggggaactggtactgttaatttggagctgtggtccgaggagaggcctgtttcaaaccaatcacctcttagaatatcccatgagtatgaggtgatagatctcttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

1065

Amino Acids

118.34

Weight (kDa)

5.92

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005660)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23640 AT3G23640 AT3G23640
fragaria_vesca	FvH4_5g24150 FvH4_5g24150 FvH4_5g24150 FvH4_5g24150
malus_domestica	MD00G1148100.v1.1
prunus_persica	Prupe.5G018900_v2.0.a1 Prupe.5G018900_v2.0.a1 Prupe.5G018900_v2.0.a1 Prupe.5G018900_v2.0.a1
pyrus_communis	pycom16g25540
rosa_chinensis	RchiOBHm_Chr7g0213851 RchiOBHm_Chr7g0213911
rosa_laevigata	RLG00000002776
rosa_multiflora	Rmu_sc0000328.1_g000012
rosa_roxburghii	Rroxscaffold_3G00245680
rosa_rugosa	Rorug07G0144700 Rorug07G0312200
rosa_samantha	Rh7AG277000 Rh7AG277600 Rh7BG271100 Rh7CG296000 Rh7CG296700 Rh7DG283400
rosa_wichuraiana	Rw7G023910 Rw7G038710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1530
AasI	GACNNNNNNGTC	1 cut(s)	1563
Acc16I	TGCGCA	1 cut(s)	2466
Acc36I	ACCTGC	2 cut(s)	1276, 1530
Acc65I	GGTACC	2 cut(s)	476, 2636
AccB1I	GGYRCC	3 cut(s)	476, 2309, 2636
AccBSI	CCGCTC	3 cut(s)	113, 520, 2649
AccIII	TCCGGA	1 cut(s)	2799
AciI	CCGC	7 cut(s)	111, 520, 1474, 1689, 1738, 1919, 2647
AclWI	GGATC	6 cut(s)	977, 1011, 1838, 2263, 2780, 2810
AcoI	YGGCCR	1 cut(s)	442
AcsI	RAATTY	5 cut(s)	53, 547, 2168, 2238, 2989
AcuI	CTGAAG	6 cut(s)	158, 249, 2151, 2271, 2349, 2562
AcvI	CACGTG	1 cut(s)	782
AcyI	GRCGYC	2 cut(s)	242, 2492
AfiI	CCNNNNNNNGG	9 cut(s)	813, 1136, 1321, 1577, 1589, 1863, 2543, 3037, 3132
AflII	CTTAAG	1 cut(s)	1861
AjnI	CCWGG	6 cut(s)	154, 1045, 1103, 1150, 2172, 2537
AjuI	GAANNNNNNNTTGG	6 cut(s)	64, 96, 112, 144, 423, 455
AloI	GAACNNNNNNTCC	2 cut(s)	290, 322
Alw21I	GWGCWC	2 cut(s)	1623, 1952
Alw26I	GTCTC	5 cut(s)	359, 377, 1491, 1868, 2383
Alw44I	GTGCAC	1 cut(s)	1948
AlwI	GGATC	6 cut(s)	977, 1011, 1838, 2263, 2780, 2810
AlwNI	CAGNNNCTG	2 cut(s)	251, 1573
Ama87I	CYCGRG	1 cut(s)	2693
Aor13HI	TCCGGA	1 cut(s)	2799
AoxI	GGCC	8 cut(s)	284, 442, 1148, 1154, 1580, 2267, 2957, 3134
ApaI	GGGCCC	1 cut(s)	2961
ApaLI	GTGCAC	1 cut(s)	1948
ApeKI	GCWGC	3 cut(s)	341, 1341, 1481
ApoI	RAATTY	5 cut(s)	53, 547, 2168, 2238, 2989
ArsI	GACNNNNNNTTYG	2 cut(s)	1867, 1899
AseI	ATTAAT	1 cut(s)	2613
Asp700I	GAANNNNTTC	2 cut(s)	435, 2557
Asp718I	GGTACC	2 cut(s)	476, 2636
AspLEI	GCGC	2 cut(s)	1758, 2467
AsuC2I	CCSGG	1 cut(s)	2704
AsuII	TTCGAA	1 cut(s)	1112
AsuNHI	GCTAGC	1 cut(s)	610
AvaI	CYCGRG	1 cut(s)	2693
AvaII	GGWCC	7 cut(s)	740, 816, 970, 1203, 1892, 2048, 3123
BaeGI	GKGCMC	4 cut(s)	1674, 1952, 2538, 2961
BaeI	ACNNNNGTAYC	2 cut(s)	1803, 1836
BalI	TGGCCA	1 cut(s)	444
BanI	GGYRCC	3 cut(s)	476, 2309, 2636
BanII	GRGCYC	2 cut(s)	1623, 2961
BauI	CACGAG	1 cut(s)	1447
BbrPI	CACGTG	1 cut(s)	782
BbsI	GAAGAC	1 cut(s)	428
Bbv12I	GWGCWC	2 cut(s)	1623, 1952
BbvI	GCAGC	3 cut(s)	353, 1328, 1468
BceAI	ACGGC	5 cut(s)	394, 505, 1650, 1687, 2943
BcgI	CGANNNNNNTGC	2 cut(s)	115, 149
BciT130I	CCWGG	6 cut(s)	156, 1047, 1105, 1152, 2174, 2539
BclI	TGATCA	1 cut(s)	232
BcnI	CCSGG	1 cut(s)	2704
BcoDI	GTCTC	5 cut(s)	359, 377, 1491, 1868, 2383
BfaI	CTAG	4 cut(s)	351, 611, 1901, 2811
BfmI	CTRYAG	1 cut(s)	252
BfoI	RGCGCY	1 cut(s)	1759
BfrI	CTTAAG	1 cut(s)	1861
BfuAI	ACCTGC	2 cut(s)	1276, 1530
BglII	AGATCT	1 cut(s)	3187
BisI	GCNGC	5 cut(s)	111, 342, 1342, 1482, 1738
BlsI	GCNGC	5 cut(s)	112, 343, 1343, 1483, 1739
Bme1390I	CCNGG	7 cut(s)	156, 1047, 1105, 1152, 2174, 2539, 2704
Bme18I	GGWCC	7 cut(s)	740, 816, 970, 1203, 1892, 2048, 3123
BmeT110I	CYCGRG	1 cut(s)	2693
BmiI	GGNNCC	7 cut(s)	478, 1581, 1893, 2049, 2311, 2638, 2959
BmrFI	CCNGG	7 cut(s)	156, 1047, 1105, 1152, 2174, 2539, 2704
BmrI	ACTGGG	3 cut(s)	504, 1343, 3100
BmsI	GCATC	7 cut(s)	53, 396, 544, 1026, 1090, 1927, 3003
BmtI	GCTAGC	1 cut(s)	614
BmuI	ACTGGG	3 cut(s)	504, 1343, 3100
BpiI	GAAGAC	1 cut(s)	428
BplI	GAGNNNNNCTC	2 cut(s)	2633, 2665
BpmI	CTGGAG	5 cut(s)	648, 862, 1515, 1800, 1892
Bpu10I	CCTNAGC	1 cut(s)	1617
Bpu14I	TTCGAA	1 cut(s)	1112
BpuEI	CTTGAG	3 cut(s)	482, 536, 2890
BpuMI	CCSGG	1 cut(s)	2704
BsaAI	YACGTR	1 cut(s)	782
BsaBI	GATNNNNATC	1 cut(s)	1995
BsaHI	GRCGYC	2 cut(s)	242, 2492
BsaI	GGTCTC	1 cut(s)	2383
BsaWI	WCCGGW	1 cut(s)	2799
BsaXI	ACNNNNNCTCC	4 cut(s)	1798, 1828, 3107, 3137
Bsc4I	CCNNNNNNNGG	9 cut(s)	813, 1136, 1321, 1577, 1589, 1863, 2543, 3037, 3132
Bse3DI	GCAATG	1 cut(s)	1952
Bse8I	GATNNNNATC	1 cut(s)	1995
BseAI	TCCGGA	1 cut(s)	2799
BseBI	CCWGG	6 cut(s)	156, 1047, 1105, 1152, 2174, 2539
BseJI	GATNNNNATC	1 cut(s)	1995
BseLI	CCNNNNNNNGG	9 cut(s)	813, 1136, 1321, 1577, 1589, 1863, 2543, 3037, 3132
BseMI	GCAATG	1 cut(s)	1952
BseMII	CTCAG	5 cut(s)	176, 1293, 1608, 2655, 2919
BseRI	GAGGAG	3 cut(s)	1765, 2043, 3143
BseSI	GKGCMC	4 cut(s)	1674, 1952, 2538, 2961
BseXI	GCAGC	3 cut(s)	353, 1328, 1468
Bsh1285I	CGRYCG	1 cut(s)	1196
BshFI	GGCC	8 cut(s)	286, 444, 1150, 1156, 1582, 2269, 2959, 3136
BshNI	GGYRCC	3 cut(s)	476, 2309, 2636
BsiEI	CGRYCG	1 cut(s)	1196
BsiHKAI	GWGCWC	2 cut(s)	1623, 1952
BsiHKCI	CYCGRG	1 cut(s)	2693
BsiSI	CCGG	2 cut(s)	2703, 2800
BslFI	GGGAC	3 cut(s)	253, 1569, 2596
BslI	CCNNNNNNNGG	9 cut(s)	813, 1136, 1321, 1577, 1589, 1863, 2543, 3037, 3132
BsmAI	GTCTC	5 cut(s)	359, 377, 1491, 1868, 2383
BsmFI	GGGAC	3 cut(s)	253, 1569, 2596
BsnI	GGCC	8 cut(s)	286, 444, 1150, 1156, 1582, 2269, 2959, 3136
Bso31I	GGTCTC	1 cut(s)	2383
BsoBI	CYCGRG	1 cut(s)	2693
Bsp119I	TTCGAA	1 cut(s)	1112
Bsp120I	GGGCCC	1 cut(s)	2957
Bsp1286I	GDGCHC	5 cut(s)	1623, 1674, 1952, 2538, 2961
Bsp13I	TCCGGA	1 cut(s)	2799
Bsp19I	CCATGG	2 cut(s)	1539, 2313
BspACI	CCGC	7 cut(s)	111, 520, 1474, 1689, 1738, 1919, 2647
BspANI	GGCC	8 cut(s)	286, 444, 1150, 1156, 1582, 2269, 2959, 3136
BspCNI	CTCAG	5 cut(s)	175, 1294, 1609, 2656, 2918
BspEI	TCCGGA	1 cut(s)	2799
BspLI	GGNNCC	7 cut(s)	478, 1581, 1893, 2049, 2311, 2638, 2959
BspMAI	CTGCAG	1 cut(s)	256
BspMI	ACCTGC	2 cut(s)	1276, 1530
BspOI	GCTAGC	1 cut(s)	614
BspPI	GGATC	6 cut(s)	977, 1011, 1838, 2263, 2780, 2810
BspT104I	TTCGAA	1 cut(s)	1112
BspT107I	GGYRCC	3 cut(s)	476, 2309, 2636
BspTI	CTTAAG	1 cut(s)	1861
BspTNI	GGTCTC	1 cut(s)	2383
BsrBI	CCGCTC	3 cut(s)	113, 520, 2649
BsrDI	GCAATG	1 cut(s)	1952
BssNI	GRCGYC	2 cut(s)	242, 2492
BssSI	CACGAG	1 cut(s)	1447
BssT1I	CCWWGG	7 cut(s)	602, 819, 993, 1539, 2313, 2790, 3031
Bst2BI	CACGAG	1 cut(s)	1447
Bst2UI	CCWGG	6 cut(s)	156, 1047, 1105, 1152, 2174, 2539
Bst6I	CTCTTC	3 cut(s)	1713, 1793, 2258
BstACI	GRCGYC	2 cut(s)	242, 2492
BstAFI	CTTAAG	1 cut(s)	1861
BstAPI	GCANNNNNTGC	2 cut(s)	1916, 2296
BstBAI	YACGTR	1 cut(s)	782
BstBI	TTCGAA	1 cut(s)	1112
BstC8I	GCNNGC	8 cut(s)	246, 446, 612, 1472, 1912, 2282, 2700, 2824
BstDEI	CTNAG	8 cut(s)	162, 192, 1302, 1559, 1617, 2664, 2905, 3158
BstDSI	CCRYGG	4 cut(s)	1539, 1666, 1703, 2313
BstH2I	RGCGCY	1 cut(s)	1759
BstHHI	GCGC	2 cut(s)	1758, 2467
BstMAI	GTCTC	5 cut(s)	359, 377, 1491, 1868, 2383
BstMCI	CGRYCG	1 cut(s)	1196
BstMWI	GCNNNNNNNGC	5 cut(s)	107, 517, 1607, 1916, 2296
BstNI	CCWGG	6 cut(s)	156, 1047, 1105, 1152, 2174, 2539
BstNSI	RCATGY	3 cut(s)	2066, 2288, 2702
BstSCI	CCNGG	7 cut(s)	154, 1045, 1103, 1150, 2172, 2537, 2702
BstSFI	CTRYAG	1 cut(s)	252
BstSLI	GKGCMC	4 cut(s)	1674, 1952, 2538, 2961
BstV1I	GCAGC	3 cut(s)	353, 1328, 1468
BstV2I	GAAGAC	1 cut(s)	428
BstX2I	RGATCY	4 cut(s)	982, 1003, 2255, 3187
BstXI	CCANNNNNNTGG	1 cut(s)	1016
BstYI	RGATCY	4 cut(s)	982, 1003, 2255, 3187
BsuRI	GGCC	8 cut(s)	286, 444, 1150, 1156, 1582, 2269, 2959, 3136
BtgI	CCRYGG	4 cut(s)	1539, 1666, 1703, 2313
BtgZI	GCGATG	1 cut(s)	691
BtsI	GCAGTG	3 cut(s)	249, 1914, 1952
BveI	ACCTGC	2 cut(s)	1276, 1530
Cac8I	GCNNGC	8 cut(s)	246, 446, 612, 1472, 1912, 2282, 2700, 2824
CaiI	CAGNNNCTG	2 cut(s)	251, 1573
CfoI	GCGC	2 cut(s)	1758, 2467
CseI	GACGC	2 cut(s)	250, 2500
DdeI	CTNAG	8 cut(s)	162, 192, 1302, 1559, 1617, 2664, 2905, 3158
DraI	TTTAAA	1 cut(s)	2112
DrdI	GACNNNNNNGTC	1 cut(s)	1563
DseDI	GACNNNNNNGTC	1 cut(s)	1563
EaeI	YGGCCR	1 cut(s)	442
Eam1104I	CTCTTC	3 cut(s)	1713, 1793, 2258
EarI	CTCTTC	3 cut(s)	1713, 1793, 2258
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	7 cut(s)	602, 819, 993, 1539, 2313, 2790, 3031
Eco147I	AGGCCT	1 cut(s)	3136
Eco24I	GRGCYC	2 cut(s)	1623, 2961
Eco31I	GGTCTC	1 cut(s)	2383
Eco32I	GATATC	1 cut(s)	216
Eco47I	GGWCC	7 cut(s)	740, 816, 970, 1203, 1892, 2048, 3123
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	6 cut(s)	158, 249, 2151, 2271, 2349, 2562
Eco72I	CACGTG	1 cut(s)	782
Eco88I	CYCGRG	1 cut(s)	2693
EcoICRI	GAGCTC	1 cut(s)	1621
EcoO109I	RGGNCCY	2 cut(s)	1580, 2048
EcoRI	GAATTC	2 cut(s)	547, 2168
EcoRII	CCWGG	6 cut(s)	154, 1045, 1103, 1150, 2172, 2537
EcoRV	GATATC	1 cut(s)	216
EcoT14I	CCWWGG	7 cut(s)	602, 819, 993, 1539, 2313, 2790, 3031
EcoT22I	ATGCAT	1 cut(s)	559
EcoT38I	GRGCYC	2 cut(s)	1623, 2961
ErhI	CCWWGG	7 cut(s)	602, 819, 993, 1539, 2313, 2790, 3031
FalI	AAGNNNNNCTT	6 cut(s)	64, 96, 803, 835, 1381, 1413
FaqI	GGGAC	3 cut(s)	253, 1569, 2596
FauNDI	CATATG	1 cut(s)	1527
FbaI	TGATCA	1 cut(s)	232
Fnu4HI	GCNGC	5 cut(s)	111, 342, 1342, 1482, 1738
FriOI	GRGCYC	2 cut(s)	1623, 2961
Fsp4HI	GCNGC	5 cut(s)	111, 342, 1342, 1482, 1738
FspBI	CTAG	4 cut(s)	351, 611, 1901, 2811
FspI	TGCGCA	1 cut(s)	2466
GlaI	GCGC	2 cut(s)	1757, 2466
GluI	GCNGC	5 cut(s)	111, 342, 1342, 1482, 1738
GsuI	CTGGAG	5 cut(s)	648, 862, 1515, 1800, 1892
HaeII	RGCGCY	1 cut(s)	1759
HaeIII	GGCC	8 cut(s)	286, 444, 1150, 1156, 1582, 2269, 2959, 3136
HapII	CCGG	2 cut(s)	2703, 2800
HgaI	GACGC	2 cut(s)	250, 2500
HhaI	GCGC	2 cut(s)	1758, 2467
Hin1I	GRCGYC	2 cut(s)	242, 2492
Hin6I	GCGC	2 cut(s)	1756, 2465
HinP1I	GCGC	2 cut(s)	1756, 2465
HincII	GTYRAC	1 cut(s)	2193
HindII	GTYRAC	1 cut(s)	2193
HpaII	CCGG	2 cut(s)	2703, 2800
Hpy166II	GTNNAC	5 cut(s)	189, 1950, 2193, 2878, 2889
Hpy8I	GTNNAC	5 cut(s)	189, 1950, 2193, 2878, 2889
Hpy99I	CGWCG	3 cut(s)	66, 1810, 2280
HpyCH4IV	ACGT	4 cut(s)	433, 581, 781, 1432
HpyF10VI	GCNNNNNNNGC	5 cut(s)	107, 517, 1607, 1916, 2296
HpyF3I	CTNAG	8 cut(s)	162, 192, 1302, 1559, 1617, 2664, 2905, 3158
HpySE526I	ACGT	4 cut(s)	433, 581, 781, 1432
Hsp92I	GRCGYC	2 cut(s)	242, 2492
HspAI	GCGC	2 cut(s)	1756, 2465
Kpn2I	TCCGGA	1 cut(s)	2799
KpnI	GGTACC	2 cut(s)	480, 2640
Ksp22I	TGATCA	1 cut(s)	232
LmnI	GCTCC	4 cut(s)	715, 843, 2030, 3115
Lsp1109I	GCAGC	3 cut(s)	353, 1328, 1468
LweI	GCATC	7 cut(s)	53, 396, 544, 1026, 1090, 1927, 3003
MaeI	CTAG	4 cut(s)	351, 611, 1901, 2811
MaeII	ACGT	4 cut(s)	433, 581, 781, 1432
MaeIII	GTNAC	5 cut(s)	199, 259, 594, 874, 1285
MbiI	CCGCTC	3 cut(s)	113, 520, 2649
MfeI	CAATTG	2 cut(s)	786, 1550
MflI	RGATCY	4 cut(s)	982, 1003, 2255, 3187
MhlI	GDGCHC	5 cut(s)	1623, 1674, 1952, 2538, 2961
MlsI	TGGCCA	1 cut(s)	444
MluNI	TGGCCA	1 cut(s)	444
MlyI	GAGTC	4 cut(s)	406, 845, 2560, 2801
MmeI	TCCRAC	3 cut(s)	143, 1914, 2782
Mox20I	TGGCCA	1 cut(s)	444
Mph1103I	ATGCAT	1 cut(s)	559
MroI	TCCGGA	1 cut(s)	2799
MroXI	GAANNNNTTC	2 cut(s)	435, 2557
MscI	TGGCCA	1 cut(s)	444
MseI	TTAA	9 cut(s)	456, 680, 1278, 1862, 2111, 2526, 2613, 2993, 3108
MslI	CAYNNNNRTG	5 cut(s)	1014, 2061, 2067, 2561, 3174
Msp20I	TGGCCA	1 cut(s)	444
MspA1I	CMGCKG	3 cut(s)	1474, 1691, 2386
MspCI	CTTAAG	1 cut(s)	1861
MspI	CCGG	2 cut(s)	2703, 2800
MspR9I	CCNGG	7 cut(s)	156, 1047, 1105, 1152, 2174, 2539, 2704
MunI	CAATTG	2 cut(s)	786, 1550
MvaI	CCWGG	6 cut(s)	156, 1047, 1105, 1152, 2174, 2539
MwoI	GCNNNNNNNGC	5 cut(s)	107, 517, 1607, 1916, 2296
NciI	CCSGG	1 cut(s)	2704
NcoI	CCATGG	2 cut(s)	1539, 2313
NdeI	CATATG	1 cut(s)	1527
NheI	GCTAGC	1 cut(s)	610
NlaIV	GGNNCC	7 cut(s)	478, 1581, 1893, 2049, 2311, 2638, 2959
NmuCI	GTSAC	3 cut(s)	259, 594, 1285
NsbI	TGCGCA	1 cut(s)	2466
NsiI	ATGCAT	1 cut(s)	559
NspI	RCATGY	3 cut(s)	2066, 2288, 2702
NspV	TTCGAA	1 cut(s)	1112
PaeI	GCATGC	1 cut(s)	2702
PaeR7I	CTCGAG	1 cut(s)	2693
PaqCI	CACCTGC	1 cut(s)	1530
PasI	CCCWGGG	1 cut(s)	1046
PceI	AGGCCT	1 cut(s)	3136
PdmI	GAANNNNTTC	2 cut(s)	435, 2557
PfoI	TCCNGGA	1 cut(s)	2172
PkrI	GCNGC	5 cut(s)	112, 343, 1343, 1483, 1739
Ple19I	CGATCG	1 cut(s)	1196
PleI	GAGTC	4 cut(s)	405, 845, 2560, 2801
PmaCI	CACGTG	1 cut(s)	782
PmlI	CACGTG	1 cut(s)	782
PpsI	GAGTC	4 cut(s)	405, 845, 2560, 2801
Ppu21I	YACGTR	1 cut(s)	782
PpuMI	RGGWCCY	1 cut(s)	2048
PshBI	ATTAAT	1 cut(s)	2613
Psp124BI	GAGCTC	1 cut(s)	1623
Psp5II	RGGWCCY	1 cut(s)	2048
Psp6I	CCWGG	6 cut(s)	154, 1045, 1103, 1150, 2172, 2537
PspCI	CACGTG	1 cut(s)	782
PspGI	CCWGG	6 cut(s)	154, 1045, 1103, 1150, 2172, 2537
PspN4I	GGNNCC	7 cut(s)	478, 1581, 1893, 2049, 2311, 2638, 2959
PspOMI	GGGCCC	1 cut(s)	2957
PspPPI	RGGWCCY	1 cut(s)	2048
PstI	CTGCAG	1 cut(s)	256
PstNI	CAGNNNCTG	2 cut(s)	251, 1573
PsuI	RGATCY	4 cut(s)	982, 1003, 2255, 3187
PvuI	CGATCG	1 cut(s)	1196
PvuII	CAGCTG	1 cut(s)	2386
RseI	CAYNNNNRTG	5 cut(s)	1014, 2061, 2067, 2561, 3174
SacI	GAGCTC	1 cut(s)	1623
SaqAI	TTAA	9 cut(s)	456, 680, 1278, 1862, 2111, 2526, 2613, 2993, 3108
SatI	GCNGC	5 cut(s)	111, 342, 1342, 1482, 1738
SchI	GAGTC	4 cut(s)	406, 845, 2560, 2801
ScrFI	CCNGG	7 cut(s)	156, 1047, 1105, 1152, 2174, 2539, 2704
SduI	GDGCHC	5 cut(s)	1623, 1674, 1952, 2538, 2961
SfaNI	GCATC	7 cut(s)	53, 396, 544, 1026, 1090, 1927, 3003
SfcI	CTRYAG	1 cut(s)	252
Sfr274I	CTCGAG	1 cut(s)	2693
SfuI	TTCGAA	1 cut(s)	1112
SinI	GGWCC	7 cut(s)	740, 816, 970, 1203, 1892, 2048, 3123
SlaI	CTCGAG	1 cut(s)	2693
SmiMI	CAYNNNNRTG	5 cut(s)	1014, 2061, 2067, 2561, 3174
SmlI	CTYRAG	5 cut(s)	461, 515, 1861, 2693, 2869
SmoI	CTYRAG	5 cut(s)	461, 515, 1861, 2693, 2869
SphI	GCATGC	1 cut(s)	2702
SseBI	AGGCCT	1 cut(s)	3136
SsiI	CCGC	7 cut(s)	111, 520, 1474, 1689, 1738, 1919, 2647
SspMI	CTAG	4 cut(s)	351, 611, 1901, 2811
SstI	GAGCTC	1 cut(s)	1623
StuI	AGGCCT	1 cut(s)	3136
StyD4I	CCNGG	7 cut(s)	154, 1045, 1103, 1150, 2172, 2537, 2702
StyI	CCWWGG	7 cut(s)	602, 819, 993, 1539, 2313, 2790, 3031
TaiI	ACGT	4 cut(s)	436, 584, 784, 1435
TaqI	TCGA	6 cut(s)	1112, 1192, 1980, 2551, 2694, 2805
TatI	WGTACW	3 cut(s)	188, 2409, 2875
TauI	GCSGC	2 cut(s)	113, 1740
Tru1I	TTAA	9 cut(s)	456, 680, 1278, 1862, 2111, 2526, 2613, 2993, 3108
Tru9I	TTAA	9 cut(s)	456, 680, 1278, 1862, 2111, 2526, 2613, 2993, 3108
TseFI	GTSAC	3 cut(s)	259, 594, 1285
TseI	GCWGC	3 cut(s)	341, 1341, 1481
Tsp45I	GTSAC	3 cut(s)	259, 594, 1285
Vha464I	CTTAAG	1 cut(s)	1861
VneI	GTGCAC	1 cut(s)	1948
VpaK11BI	GGWCC	7 cut(s)	740, 816, 970, 1203, 1892, 2048, 3123
VspI	ATTAAT	1 cut(s)	2613
XapI	RAATTY	5 cut(s)	53, 547, 2168, 2238, 2989
XceI	RCATGY	3 cut(s)	2066, 2288, 2702
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1370, 3095
XhoI	CTCGAG	1 cut(s)	2693
XmnI	GAANNNNTTC	2 cut(s)	435, 2557
XspI	CTAG	4 cut(s)	351, 611, 1901, 2811
Zsp2I	ATGCAT	1 cut(s)	559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.