Rw7G023910

Belongs to the glycosyl hydrolase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0005660
Physical Location & Seq
Forward (+)
28927110 .. 28939857
12748 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G023910.1

Sequence Viewer

Length: 3138 bp
ATGGGAGAAGCACCAGTGCTCACTGCCACACTAGTAGGTGAAGCATCCTCCAAATTGACCCGATTTCCAGGTACCACTTCCATTTTTGATACCAACTCTCATCCAACCCCGATTTCGTTGCTGAGGTTGAACAAGAAGCCTGGTTCTCAGTCTGCCTTCTTCAGAAGGAAGTGTACTAAGTTGGTTGCGAAAAGTTTGATATCCAAAATGGCTGGTGATCAAGGGACGCCAGCCACTGCAGATGTCACTTCAGGAGATATGATTTTCGGGCCTATTATTGAGGATGGTGGTCTCTCTTTTGTGAATGGCAAGGATAGGGAGACACCGATTCAGAGTCAAACGATGCCGTCCTATATCCCAATTTTGAACGTCTTCTTGGCCAGCAGATTGTTAAACTTGAGGTCACTTCCTGTTGGTACCTCTTTATACGGCACTGGGGAGGTTAGTGGGCAACTTGAGCGGACAGGAAAAAGAGTTTTTACTTGGAATTCGGATGCATGGGGCTATGGTTCTGGAACTACGTCATTGTACCAGTCACATCCTTGGGTGCTAGCTGTTCTTCCTTCTGGAGAGGCATTAGGAGTTCTTGCTGATACAACAAAGCGTTGTGAGATTGATTTAAGAAAAGAATCTTTGATACGGTTCATCGCTCCATCCTCTTATCCTGTCATTACTTTTGGTCCATTTGCTACACCCAATGCTGTTTTGAGAGCTTTATCACGTGCAATTGGTACTGTATTTATGCCCCCAAAGTGGTCCTTGGGTTATCAACAATGTCGCTGGAGCTATGACTCTGATAAGAGAGTTCAAGAGGTTACAAGAACTTTTCGGGAGAAAAAGATTCCTTGTGATGTTGTATGGATGGATATTGATTATATGGATGGTTTTCGTTGTTTCACTTTTGACAAGGACCGTTTTCAAGATCCAAAATCCTTGGTGAAGGATCTCCACCAAAATGGTTTCAAGGCAATATGGATGCTTGACCCAGGGATAAAAGTGGAAGATGGTTATTTTGTGTATGATAGTGGTTCTAAAACTGATGCCTGGATTTCGAAAGCAGATGGAAAACCTTTTGTTGGGGAGGTGTGGCCTGGGCCTTGTGTTTTCCCAGACTTTACACAGGCAAAAGTTCGATCGTGGTGGTCCAATTTAGTCAAAGATTTCATTTGTAATGGTGTTGATGGTATATGGAATGACATGAATGAACCTGCTGTTTTTAAGGTTGTCACAAAAACAATGCCTGAGAGCAATATCCATAAGGGGGATGATGAACTGGGAGGCTGCCAGAATCACTCACACTACCACAATGTCTATGGGTTGCTGATGGCAAGATCAACTTATGAAGGGATGAAATTGGGTAATGCAAAGAAACGTCCTTTTGTCCTCACGAGAGCTGGATTTATTGGTAGTCAGCGGTATGCTGCAACATGGACCGGAGACAATCTTTCAACTTGGGAACACCTGCATATGAGTATTCCCATGGTACTTCAATTGGGACTTAGTGGTCAGCCACTGTCGGGGCCTGATATTGGTGGCTTTGCTGGAAATGCAACACCTGAGCTCTTTGGAAGATGGGTGGGCATCGGTTCTCTGTTTCCCTTTTGCCGTGGGCACTCTGAAAAGGACACCGCTGACCATGAGCCGTGGTCTTTTGGGGAAGAGTGTGAAGAAGTATGCCGCTTGGCATTGAGGAGGCGCTACCGTCTTATACCTCATTTATACACTCTCTTCTATATGGCTCATACGACGGGTACTCCAGTGGCAAGTCCTACATTTTTTGCTGATCCCAAAGATACCAGCTTAAGGAAACTGGAGACTTCTTTTTTGTTGGGTCCAATTCTAGTGTATGCAAGCACTGCGGTTGGTCGGGGGATGGATGCTTTGCAGTGCACATTGCCCAAAGGAATCTGGATGAGTTTCGATTTTGATGATTCACATCCAGATTTACCAGCATTATATTTGCAAGGTGGAGCAATTATTCCTGTGGGTCCTCCTCATCAGCATGTTGGTGAATCTAATATATTAGATGACTTGACACTCCTTGTGGCTTTAAATGAACATGGGAAAGCTGAAGGTGTTTTATATGAAGATGATGGTGATGGATATGAATTCCTGGAAGGAGGATTCTTGTTGACACACTATGTTGCTGAACTTCAATCATCAACACTTACTCTCAAAATTTCAAAAACTGAAGGATCTTGGAAGAGGCCAAACCGTCGCTTGCATGTGCAATTATTGCTTGGTGGAGGTGCCATGGTTGATATATGGGGTAAGGATGGAGAGATTCTTCAACTTTCAATGCCTTCAGAACAGGAGGTCTCACAGCTGGTTTCTACCAGTGAGAAACAGTACAGAACTCGTTTGGAAAATGCCAAGCGTATTCCAGCAGTAGAAGTGAGTTCTGCGCAGAAAGGAATAGAGCTTTCAAGGACGCCTATTGAATTGAAAGGTGGTGATTGGGTTATTAAAGTAGTGCCCTGGATTGGTGGTCGAATCATTTCCATGACTCACCTTCCTTCAGGGACACAGTGGCTTCACAGTAGGGTTGATATTAATGGTTATGAAGAATATAGTGGTACCGAGTACCGCTCTGCTGGATGTTCTGAGGAATACAATGTTATTGAACGAAATCTCGAGCATGCCGGGGGGGAGGAATCTCTCATGTTAGAAGGTGATATAGGGGGTGGATTGGTTCTCCAACGACAGTTATATATTCCAAAGAATGATCCCAAGGTTTTCCGGATCGACTCTAGCATTATAGCACGCAGAGTTGGTGCTGGTTCTGGTGGATATTCAAGACTGGTCTGCTTGAGAGTACACCCGATGTTCACCCTGTTGCACCCCTCAGAATCTCATGTTTCATTTACGGCTATTGACGGGTCAAAGCATGAAATTGGGCCCGAATCTAACGAGCAGTTCTATGAAGGGAATTTAATGCCTAATGGTGAATGGATGCTCATTGATAAATGCCTTGGCTTGGGGTTATTGAATCGGTTTGATGTCAGTCAGGTTTTCAAGTGCCTAATCCACTGGGGAACTGGCACTGTTAATTTGGAGCTGTGGTCCGAGGAGAGGCCTGTTTCAAACCAATCACCTCTTAGAATATCCCATGAGTATGAGGTGATAGATCTCTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00052 ko00500 ko01100 map00052 map00500 map01100
Pfam Domains
Protein Families
DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

1045

Amino Acids

116.06

Weight (kDa)

6.0

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 135 - 206 4.2e-15 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 247 - 576 1.4e-125 Glycosyl hydrolases family 31 TIM-barrel domain
DUF5110 PF17137 678 - 746 3.8e-13 Domain of unknown function (DUF5110)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1470
AasI GACNNNNNNGTC 1 cut(s) 1503
Acc16I TGCGCA 1 cut(s) 2406
Acc36I ACCTGC 2 cut(s) 1216, 1470
Acc65I GGTACC 3 cut(s) 71, 416, 2576
AccB1I GGYRCC 4 cut(s) 71, 416, 2249, 2576
AccBSI CCGCTC 2 cut(s) 460, 2589
AccIII TCCGGA 1 cut(s) 2739
AciI CCGC 6 cut(s) 460, 1414, 1629, 1678, 1859, 2587
AclWI GGATC 6 cut(s) 917, 951, 1778, 2203, 2720, 2750
AcoI YGGCCR 1 cut(s) 378
AcsI RAATTY 4 cut(s) 487, 2108, 2178, 2929
AcuI CTGAAG 6 cut(s) 145, 234, 2091, 2211, 2289, 2502
AcvI CACGTG 1 cut(s) 722
AcyI GRCGYC 2 cut(s) 227, 2432
AfiI CCNNNNNNNGG 9 cut(s) 753, 1076, 1261, 1517, 1529, 1803, 2483, 2977, 3072
AflII CTTAAG 1 cut(s) 1801
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 7 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477
AjuI GAANNNNNNNTTGG 4 cut(s) 97, 129, 359, 391
Alw21I GWGCWC 3 cut(s) 21, 1563, 1892
Alw26I GTCTC 5 cut(s) 296, 314, 1431, 1808, 2323
Alw44I GTGCAC 1 cut(s) 1888
AlwI GGATC 6 cut(s) 917, 951, 1778, 2203, 2720, 2750
AlwNI CAGNNNCTG 2 cut(s) 236, 1513
Ama87I CYCGRG 1 cut(s) 2633
Aor13HI TCCGGA 1 cut(s) 2739
AoxI GGCC 8 cut(s) 269, 378, 1088, 1094, 1520, 2207, 2897, 3074
ApaI GGGCCC 1 cut(s) 2901
ApaLI GTGCAC 1 cut(s) 1888
ApeKI GCWGC 2 cut(s) 1281, 1421
ApoI RAATTY 4 cut(s) 487, 2108, 2178, 2929
ArsI GACNNNNNNTTYG 2 cut(s) 1807, 1839
AseI ATTAAT 1 cut(s) 2553
Asp700I GAANNNNTTC 2 cut(s) 371, 2497
Asp718I GGTACC 3 cut(s) 71, 416, 2576
AspLEI GCGC 2 cut(s) 1698, 2407
AsuC2I CCSGG 1 cut(s) 2644
AsuII TTCGAA 1 cut(s) 1052
AsuNHI GCTAGC 1 cut(s) 550
AvaI CYCGRG 1 cut(s) 2633
AvaII GGWCC 8 cut(s) 680, 756, 910, 1143, 1431, 1832, 1988, 3063
BaeGI GKGCMC 4 cut(s) 1614, 1892, 2478, 2901
BaeI ACNNNNGTAYC 2 cut(s) 1743, 1776
BalI TGGCCA 1 cut(s) 380
BanI GGYRCC 4 cut(s) 71, 416, 2249, 2576
BanII GRGCYC 2 cut(s) 1563, 2901
BarI GAAGNNNNNNTAC 2 cut(s) 157, 189
BauI CACGAG 1 cut(s) 1387
BbrPI CACGTG 1 cut(s) 722
BbsI GAAGAC 1 cut(s) 364
Bbv12I GWGCWC 3 cut(s) 21, 1563, 1892
BbvCI CCTCAGC 1 cut(s) 122
BbvI GCAGC 2 cut(s) 1268, 1408
BceAI ACGGC 5 cut(s) 331, 445, 1590, 1627, 2883
BcgI CGANNNNNNTGC 2 cut(s) 100, 134
BciT130I CCWGG 7 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479
BclI TGATCA 1 cut(s) 217
BcnI CCSGG 1 cut(s) 2644
BcoDI GTCTC 5 cut(s) 296, 314, 1431, 1808, 2323
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 4 cut(s) 32, 551, 1841, 2751
BfmI CTRYAG 1 cut(s) 237
BfoI RGCGCY 1 cut(s) 1699
BfrI CTTAAG 1 cut(s) 1801
BfuAI ACCTGC 2 cut(s) 1216, 1470
BglII AGATCT 1 cut(s) 3127
BisI GCNGC 3 cut(s) 1282, 1422, 1678
BlsI GCNGC 3 cut(s) 1283, 1423, 1679
Bme1390I CCNGG 8 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479, 2644
Bme18I GGWCC 8 cut(s) 680, 756, 910, 1143, 1431, 1832, 1988, 3063
BmeT110I CYCGRG 1 cut(s) 2633
BmiI GGNNCC 8 cut(s) 73, 418, 1521, 1833, 1989, 2251, 2578, 2899
BmrFI CCNGG 8 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479, 2644
BmrI ACTGGG 3 cut(s) 444, 1283, 3040
BmsI GCATC 8 cut(s) 53, 333, 484, 966, 1030, 1590, 1867, 2943
BmtI GCTAGC 1 cut(s) 554
BmuI ACTGGG 3 cut(s) 444, 1283, 3040
BpiI GAAGAC 1 cut(s) 364
BplI GAGNNNNNCTC 2 cut(s) 2573, 2605
BpmI CTGGAG 4 cut(s) 588, 802, 1740, 1832
Bpu10I CCTNAGC 2 cut(s) 122, 1557
Bpu14I TTCGAA 1 cut(s) 1052
BpuEI CTTGAG 3 cut(s) 418, 476, 2830
BpuMI CCSGG 1 cut(s) 2644
BsaAI YACGTR 1 cut(s) 722
BsaBI GATNNNNATC 1 cut(s) 1935
BsaHI GRCGYC 2 cut(s) 227, 2432
BsaI GGTCTC 2 cut(s) 296, 2323
BsaWI WCCGGW 2 cut(s) 1433, 2739
BsaXI ACNNNNNCTCC 4 cut(s) 1738, 1768, 3047, 3077
Bsc4I CCNNNNNNNGG 9 cut(s) 753, 1076, 1261, 1517, 1529, 1803, 2483, 2977, 3072
Bse3DI GCAATG 1 cut(s) 1892
Bse8I GATNNNNATC 1 cut(s) 1935
BseAI TCCGGA 1 cut(s) 2739
BseBI CCWGG 7 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479
BseJI GATNNNNATC 1 cut(s) 1935
BseLI CCNNNNNNNGG 9 cut(s) 753, 1076, 1261, 1517, 1529, 1803, 2483, 2977, 3072
BseMI GCAATG 1 cut(s) 1892
BseMII CTCAG 6 cut(s) 113, 161, 1233, 1548, 2595, 2859
BseRI GAGGAG 3 cut(s) 1705, 1983, 3083
BseSI GKGCMC 4 cut(s) 1614, 1892, 2478, 2901
BseXI GCAGC 2 cut(s) 1268, 1408
Bsh1285I CGRYCG 1 cut(s) 1136
BshFI GGCC 8 cut(s) 271, 380, 1090, 1096, 1522, 2209, 2899, 3076
BshNI GGYRCC 4 cut(s) 71, 416, 2249, 2576
BsiEI CGRYCG 1 cut(s) 1136
BsiHKAI GWGCWC 3 cut(s) 21, 1563, 1892
BsiHKCI CYCGRG 1 cut(s) 2633
BsiSI CCGG 3 cut(s) 1434, 2643, 2740
BslFI GGGAC 3 cut(s) 238, 1509, 2536
BslI CCNNNNNNNGG 9 cut(s) 753, 1076, 1261, 1517, 1529, 1803, 2483, 2977, 3072
BsmAI GTCTC 5 cut(s) 296, 314, 1431, 1808, 2323
BsmFI GGGAC 3 cut(s) 238, 1509, 2536
BsnI GGCC 8 cut(s) 271, 380, 1090, 1096, 1522, 2209, 2899, 3076
Bso31I GGTCTC 2 cut(s) 296, 2323
BsoBI CYCGRG 1 cut(s) 2633
Bsp119I TTCGAA 1 cut(s) 1052
Bsp120I GGGCCC 1 cut(s) 2897
Bsp1286I GDGCHC 6 cut(s) 21, 1563, 1614, 1892, 2478, 2901
Bsp13I TCCGGA 1 cut(s) 2739
Bsp19I CCATGG 2 cut(s) 1479, 2253
BspACI CCGC 6 cut(s) 460, 1414, 1629, 1678, 1859, 2587
BspANI GGCC 8 cut(s) 271, 380, 1090, 1096, 1522, 2209, 2899, 3076
BspCNI CTCAG 6 cut(s) 114, 160, 1234, 1549, 2596, 2858
BspEI TCCGGA 1 cut(s) 2739
BspLI GGNNCC 8 cut(s) 73, 418, 1521, 1833, 1989, 2251, 2578, 2899
BspMAI CTGCAG 1 cut(s) 241
BspMI ACCTGC 2 cut(s) 1216, 1470
BspOI GCTAGC 1 cut(s) 554
BspPI GGATC 6 cut(s) 917, 951, 1778, 2203, 2720, 2750
BspT104I TTCGAA 1 cut(s) 1052
BspT107I GGYRCC 4 cut(s) 71, 416, 2249, 2576
BspTI CTTAAG 1 cut(s) 1801
BspTNI GGTCTC 2 cut(s) 296, 2323
BsrBI CCGCTC 2 cut(s) 460, 2589
BsrDI GCAATG 1 cut(s) 1892
BssNI GRCGYC 2 cut(s) 227, 2432
BssSI CACGAG 1 cut(s) 1387
BssT1I CCWWGG 7 cut(s) 542, 759, 933, 1479, 2253, 2730, 2971
Bst2BI CACGAG 1 cut(s) 1387
Bst2UI CCWGG 7 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479
Bst6I CTCTTC 3 cut(s) 1653, 1733, 2198
BstACI GRCGYC 2 cut(s) 227, 2432
BstAFI CTTAAG 1 cut(s) 1801
BstAPI GCANNNNNTGC 2 cut(s) 1856, 2236
BstBAI YACGTR 1 cut(s) 722
BstBI TTCGAA 1 cut(s) 1052
BstC8I GCNNGC 7 cut(s) 231, 382, 552, 1852, 2222, 2640, 2764
BstDEI CTNAG 9 cut(s) 122, 147, 177, 1242, 1499, 1557, 2604, 2845, 3098
BstDSI CCRYGG 4 cut(s) 1479, 1606, 1643, 2253
BstH2I RGCGCY 1 cut(s) 1699
BstHHI GCGC 2 cut(s) 1698, 2407
BstMAI GTCTC 5 cut(s) 296, 314, 1431, 1808, 2323
BstMCI CGRYCG 1 cut(s) 1136
BstMWI GCNNNNNNNGC 4 cut(s) 457, 1547, 1856, 2236
BstNI CCWGG 7 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479
BstNSI RCATGY 3 cut(s) 2006, 2228, 2642
BstSCI CCNGG 8 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477, 2642
BstSFI CTRYAG 1 cut(s) 237
BstSLI GKGCMC 4 cut(s) 1614, 1892, 2478, 2901
BstV1I GCAGC 2 cut(s) 1268, 1408
BstV2I GAAGAC 1 cut(s) 364
BstX2I RGATCY 4 cut(s) 922, 943, 2195, 3127
BstXI CCANNNNNNTGG 1 cut(s) 956
BstYI RGATCY 4 cut(s) 922, 943, 2195, 3127
BsuRI GGCC 8 cut(s) 271, 380, 1090, 1096, 1522, 2209, 2899, 3076
BtgI CCRYGG 4 cut(s) 1479, 1606, 1643, 2253
BtgZI GCGATG 1 cut(s) 631
BtsI GCAGTG 4 cut(s) 21, 234, 1854, 1892
BveI ACCTGC 2 cut(s) 1216, 1470
Cac8I GCNNGC 7 cut(s) 231, 382, 552, 1852, 2222, 2640, 2764
CaiI CAGNNNCTG 2 cut(s) 236, 1513
CfoI GCGC 2 cut(s) 1698, 2407
CseI GACGC 2 cut(s) 235, 2440
DdeI CTNAG 9 cut(s) 122, 147, 177, 1242, 1499, 1557, 2604, 2845, 3098
DraI TTTAAA 1 cut(s) 2052
DrdI GACNNNNNNGTC 1 cut(s) 1503
DseDI GACNNNNNNGTC 1 cut(s) 1503
EaeI YGGCCR 1 cut(s) 378
Eam1104I CTCTTC 3 cut(s) 1653, 1733, 2198
EarI CTCTTC 3 cut(s) 1653, 1733, 2198
Ecl136II GAGCTC 1 cut(s) 1561
Eco130I CCWWGG 7 cut(s) 542, 759, 933, 1479, 2253, 2730, 2971
Eco147I AGGCCT 1 cut(s) 3076
Eco24I GRGCYC 2 cut(s) 1563, 2901
Eco31I GGTCTC 2 cut(s) 296, 2323
Eco32I GATATC 1 cut(s) 201
Eco47I GGWCC 8 cut(s) 680, 756, 910, 1143, 1431, 1832, 1988, 3063
Eco53kI GAGCTC 1 cut(s) 1561
Eco57I CTGAAG 6 cut(s) 145, 234, 2091, 2211, 2289, 2502
Eco72I CACGTG 1 cut(s) 722
Eco88I CYCGRG 1 cut(s) 2633
EcoICRI GAGCTC 1 cut(s) 1561
EcoO109I RGGNCCY 2 cut(s) 1520, 1988
EcoRI GAATTC 2 cut(s) 487, 2108
EcoRII CCWGG 7 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477
EcoRV GATATC 1 cut(s) 201
EcoT14I CCWWGG 7 cut(s) 542, 759, 933, 1479, 2253, 2730, 2971
EcoT22I ATGCAT 1 cut(s) 499
EcoT38I GRGCYC 2 cut(s) 1563, 2901
ErhI CCWWGG 7 cut(s) 542, 759, 933, 1479, 2253, 2730, 2971
FalI AAGNNNNNCTT 4 cut(s) 743, 775, 1321, 1353
FaqI GGGAC 3 cut(s) 238, 1509, 2536
FauNDI CATATG 1 cut(s) 1467
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 3 cut(s) 1282, 1422, 1678
FriOI GRGCYC 2 cut(s) 1563, 2901
Fsp4HI GCNGC 3 cut(s) 1282, 1422, 1678
FspBI CTAG 4 cut(s) 32, 551, 1841, 2751
FspI TGCGCA 1 cut(s) 2406
GlaI GCGC 2 cut(s) 1697, 2406
GluI GCNGC 3 cut(s) 1282, 1422, 1678
GsuI CTGGAG 4 cut(s) 588, 802, 1740, 1832
HaeII RGCGCY 1 cut(s) 1699
HaeIII GGCC 8 cut(s) 271, 380, 1090, 1096, 1522, 2209, 2899, 3076
HapII CCGG 3 cut(s) 1434, 2643, 2740
HgaI GACGC 2 cut(s) 235, 2440
HhaI GCGC 2 cut(s) 1698, 2407
Hin1I GRCGYC 2 cut(s) 227, 2432
Hin6I GCGC 2 cut(s) 1696, 2405
HinP1I GCGC 2 cut(s) 1696, 2405
HincII GTYRAC 1 cut(s) 2133
HindII GTYRAC 1 cut(s) 2133
HpaII CCGG 3 cut(s) 1434, 2643, 2740
Hpy166II GTNNAC 5 cut(s) 174, 1890, 2133, 2818, 2829
Hpy188I TCNGA 9 cut(s) 164, 333, 493, 796, 1618, 2308, 2605, 2848, 3067
Hpy8I GTNNAC 5 cut(s) 174, 1890, 2133, 2818, 2829
Hpy99I CGWCG 2 cut(s) 1750, 2220
HpyCH4IV ACGT 4 cut(s) 369, 521, 721, 1372
HpyF10VI GCNNNNNNNGC 4 cut(s) 457, 1547, 1856, 2236
HpyF3I CTNAG 9 cut(s) 122, 147, 177, 1242, 1499, 1557, 2604, 2845, 3098
HpySE526I ACGT 4 cut(s) 369, 521, 721, 1372
Hsp92I GRCGYC 2 cut(s) 227, 2432
HspAI GCGC 2 cut(s) 1696, 2405
Kpn2I TCCGGA 1 cut(s) 2739
KpnI GGTACC 3 cut(s) 75, 420, 2580
Ksp22I TGATCA 1 cut(s) 217
LmnI GCTCC 4 cut(s) 655, 783, 1970, 3055
Lsp1109I GCAGC 2 cut(s) 1268, 1408
LweI GCATC 8 cut(s) 53, 333, 484, 966, 1030, 1590, 1867, 2943
MaeI CTAG 4 cut(s) 32, 551, 1841, 2751
MaeII ACGT 4 cut(s) 369, 521, 721, 1372
MaeIII GTNAC 5 cut(s) 244, 402, 534, 814, 1225
MbiI CCGCTC 2 cut(s) 460, 2589
MfeI CAATTG 2 cut(s) 726, 1490
MflI RGATCY 4 cut(s) 922, 943, 2195, 3127
MhlI GDGCHC 6 cut(s) 21, 1563, 1614, 1892, 2478, 2901
MlsI TGGCCA 1 cut(s) 380
MluNI TGGCCA 1 cut(s) 380
MlyI GAGTC 4 cut(s) 343, 785, 2500, 2741
MmeI TCCRAC 2 cut(s) 128, 2722
Mox20I TGGCCA 1 cut(s) 380
Mph1103I ATGCAT 1 cut(s) 499
MroI TCCGGA 1 cut(s) 2739
MroXI GAANNNNTTC 2 cut(s) 371, 2497
MscI TGGCCA 1 cut(s) 380
MseI TTAA 9 cut(s) 392, 620, 1218, 1802, 2051, 2466, 2553, 2933, 3048
MslI CAYNNNNRTG 5 cut(s) 954, 2001, 2007, 2501, 3114
Msp20I TGGCCA 1 cut(s) 380
MspA1I CMGCKG 3 cut(s) 1414, 1631, 2326
MspCI CTTAAG 1 cut(s) 1801
MspI CCGG 3 cut(s) 1434, 2643, 2740
MspR9I CCNGG 8 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479, 2644
MunI CAATTG 2 cut(s) 726, 1490
MvaI CCWGG 7 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479
MwoI GCNNNNNNNGC 4 cut(s) 457, 1547, 1856, 2236
NciI CCSGG 1 cut(s) 2644
NcoI CCATGG 2 cut(s) 1479, 2253
NdeI CATATG 1 cut(s) 1467
NheI GCTAGC 1 cut(s) 550
NlaIV GGNNCC 8 cut(s) 73, 418, 1521, 1833, 1989, 2251, 2578, 2899
NmuCI GTSAC 4 cut(s) 244, 402, 534, 1225
NsbI TGCGCA 1 cut(s) 2406
NsiI ATGCAT 1 cut(s) 499
NspI RCATGY 3 cut(s) 2006, 2228, 2642
NspV TTCGAA 1 cut(s) 1052
PaeI GCATGC 1 cut(s) 2642
PaeR7I CTCGAG 1 cut(s) 2633
PaqCI CACCTGC 1 cut(s) 1470
PasI CCCWGGG 1 cut(s) 986
PceI AGGCCT 1 cut(s) 3076
PdmI GAANNNNTTC 2 cut(s) 371, 2497
PfoI TCCNGGA 1 cut(s) 2112
PkrI GCNGC 3 cut(s) 1283, 1423, 1679
Ple19I CGATCG 1 cut(s) 1136
PleI GAGTC 4 cut(s) 342, 785, 2500, 2741
PmaCI CACGTG 1 cut(s) 722
PmlI CACGTG 1 cut(s) 722
PpsI GAGTC 4 cut(s) 342, 785, 2500, 2741
Ppu21I YACGTR 1 cut(s) 722
PpuMI RGGWCCY 1 cut(s) 1988
PshBI ATTAAT 1 cut(s) 2553
Psp124BI GAGCTC 1 cut(s) 1563
Psp5II RGGWCCY 1 cut(s) 1988
Psp6I CCWGG 7 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477
PspCI CACGTG 1 cut(s) 722
PspGI CCWGG 7 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477
PspN4I GGNNCC 8 cut(s) 73, 418, 1521, 1833, 1989, 2251, 2578, 2899
PspOMI GGGCCC 1 cut(s) 2897
PspPPI RGGWCCY 1 cut(s) 1988
PstI CTGCAG 1 cut(s) 241
PstNI CAGNNNCTG 2 cut(s) 236, 1513
PsuI RGATCY 4 cut(s) 922, 943, 2195, 3127
PvuI CGATCG 1 cut(s) 1136
PvuII CAGCTG 1 cut(s) 2326
RseI CAYNNNNRTG 5 cut(s) 954, 2001, 2007, 2501, 3114
SacI GAGCTC 1 cut(s) 1563
SaqAI TTAA 9 cut(s) 392, 620, 1218, 1802, 2051, 2466, 2553, 2933, 3048
SatI GCNGC 3 cut(s) 1282, 1422, 1678
SchI GAGTC 4 cut(s) 343, 785, 2500, 2741
ScrFI CCNGG 8 cut(s) 69, 141, 987, 1045, 1092, 2114, 2479, 2644
SduI GDGCHC 6 cut(s) 21, 1563, 1614, 1892, 2478, 2901
SfaNI GCATC 8 cut(s) 53, 333, 484, 966, 1030, 1590, 1867, 2943
SfcI CTRYAG 1 cut(s) 237
Sfr274I CTCGAG 1 cut(s) 2633
SfuI TTCGAA 1 cut(s) 1052
SinI GGWCC 8 cut(s) 680, 756, 910, 1143, 1431, 1832, 1988, 3063
SlaI CTCGAG 1 cut(s) 2633
SmiMI CAYNNNNRTG 5 cut(s) 954, 2001, 2007, 2501, 3114
SmlI CTYRAG 5 cut(s) 397, 455, 1801, 2633, 2809
SmoI CTYRAG 5 cut(s) 397, 455, 1801, 2633, 2809
SpeI ACTAGT 1 cut(s) 31
SphI GCATGC 1 cut(s) 2642
SseBI AGGCCT 1 cut(s) 3076
SsiI CCGC 6 cut(s) 460, 1414, 1629, 1678, 1859, 2587
SspMI CTAG 4 cut(s) 32, 551, 1841, 2751
SstI GAGCTC 1 cut(s) 1563
StuI AGGCCT 1 cut(s) 3076
StyD4I CCNGG 8 cut(s) 67, 139, 985, 1043, 1090, 2112, 2477, 2642
StyI CCWWGG 7 cut(s) 542, 759, 933, 1479, 2253, 2730, 2971
TaiI ACGT 4 cut(s) 372, 524, 724, 1375
TaqI TCGA 6 cut(s) 1052, 1132, 1920, 2491, 2634, 2745
TatI WGTACW 3 cut(s) 173, 2349, 2815
TauI GCSGC 1 cut(s) 1680
Tru1I TTAA 9 cut(s) 392, 620, 1218, 1802, 2051, 2466, 2553, 2933, 3048
Tru9I TTAA 9 cut(s) 392, 620, 1218, 1802, 2051, 2466, 2553, 2933, 3048
TseFI GTSAC 4 cut(s) 244, 402, 534, 1225
TseI GCWGC 2 cut(s) 1281, 1421
Tsp45I GTSAC 4 cut(s) 244, 402, 534, 1225
Vha464I CTTAAG 1 cut(s) 1801
VneI GTGCAC 1 cut(s) 1888
VpaK11BI GGWCC 8 cut(s) 680, 756, 910, 1143, 1431, 1832, 1988, 3063
VspI ATTAAT 1 cut(s) 2553
XapI RAATTY 4 cut(s) 487, 2108, 2178, 2929
XceI RCATGY 3 cut(s) 2006, 2228, 2642
XcmI CCANNNNNNNNNTGG 2 cut(s) 1310, 3035
XhoI CTCGAG 1 cut(s) 2633
XmnI GAANNNNTTC 2 cut(s) 371, 2497
XspI CTAG 4 cut(s) 32, 551, 1841, 2751
Zsp2I ATGCAT 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.