Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000500.1

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Forward (+)

27150 .. 30138

Gene Structure 2989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

atgagtctgacttcacttctgggtcatggttgccggagtttagttgcgccggtggcccttgcgcgcacgttggcactgacccatgttgctctgggtgaacattcgaagagctaccagcatgtgaaggtggcttggttttctaagaggtcaaagaagaagaaaagggttgcatgtgagtctttgaaacaagaggttacttacccaactgctgctgctgctgctgcttctgtttatggctacccatatactcgtttacttccatgtccctcacagaatggaccaccaagagttgagcacttggttgtttccgaagggggccctgttctagaatatatatgcaaaaatctggatcttcctgctcagtttgttgcagatcttatccattttggagctgtgtattatgcccttgtatgtccaaagcctcctccaaccgcgacgcccgaggaaatgaaggtatataaagaagctacagcaccatcagtactgaaaaagagagcttctataaaaggaaaaactgtaagagaagcacagaagactttcaggatcacacatgtagaccaatttgttgaagatggaacgtacttacgtgtgcatgtacacccaaagcgtttccctaggtgctatgaaattgactggaaatcaagagttatagcagtaaatgaagactttgtggtgttggacaaacctgctggtacaacagttggaggaaccacagacaacattgaagaaagttgtgcaacctttacctcccgtgccttaggactaacaacccccctgatgaccacacatcagattgataattgtacagaaggatgtgttgtcttagctagaaccaaggagtattgctcagtttttcatggaaaaatccgagaaaaacaagtgaagaaactttatcttgctcttgctgctgctcctgtgccacttggaacaattactcactacatgcgtccaattaatgtggctccacgactcatttcagaagattccattgaaaggtggagtttgtgtcagcttgaggtgatggaatgcaagaaagttccctggccaaattctgtcatcgaagagaaatacggtgttgaagactgtgggtggccttcaaaagattatgcatatgagtgtaaaatcaaccttttgactgggaagactcatcagattcgagcacagttagctgctcatggtgcacctctagtgggtgattccatgtacatgccagctgcaattgcagagattgcaagtcctgagctgaacccgtttggcaaacataagaaacattatattggcgaagatgagaaagaaatagctgttactgagtggatggcacggcatggaaaggaacctaatgttgctattggtcttcaagcttgtcagatatcatgggatgatggcgagcacagttttgaggctagagctccttggtggaggtgtgaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

476

Amino Acids

53.01

Weight (kDa)

8.55

Isoelectric Point (pI)

48.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	222 - 391	7.9e-27	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	694
AccI	GTMKAC	1 cut(s)	555
AccII	CGCG	2 cut(s)	64, 434
AciI	CCGC	1 cut(s)	432
AclWI	GGATC	2 cut(s)	357, 551
AcoI	YGGCCR	1 cut(s)	1043
AcsI	RAATTY	1 cut(s)	1048
AcyI	GRCGYC	1 cut(s)	437
AfaI	GTAC	6 cut(s)	483, 581, 597, 694, 805, 1205
AfiI	CCNNNNNNNGG	2 cut(s)	993, 1190
AflIII	ACRYGT	2 cut(s)	550, 586
AgsI	TTSAA	7 cut(s)	184, 569, 725, 992, 1079, 1098, 1358
AjnI	CCWGG	1 cut(s)	1040
Alw21I	GWGCWC	5 cut(s)	297, 1162, 1183, 1392, 1411
Alw44I	GTGCAC	1 cut(s)	1179
AlwI	GGATC	2 cut(s)	357, 551
Ama87I	CYCGRG	1 cut(s)	440
AoxI	GGCC	4 cut(s)	54, 316, 1043, 1091
ApaI	GGGCCC	1 cut(s)	320
ApaLI	GTGCAC	1 cut(s)	1179
ApeKI	GCWGC	9 cut(s)	209, 212, 215, 218, 221, 905, 908, 1169, 1214
ApoI	RAATTY	1 cut(s)	1048
AseI	ATTAAT	1 cut(s)	954
Asp700I	GAANNNNTTC	1 cut(s)	536
AspA2I	CCTAGG	1 cut(s)	614
AspLEI	GCGC	3 cut(s)	49, 64, 66
AspS9I	GGNCC	4 cut(s)	55, 278, 316, 317
AsuHPI	GGTGA	3 cut(s)	107, 1030, 1205
AsuII	TTCGAA	1 cut(s)	104
AvaI	CYCGRG	1 cut(s)	440
AvaII	GGWCC	1 cut(s)	278
AvrII	CCTAGG	1 cut(s)	614
AxyI	CCTNAGG	1 cut(s)	757
BaeGI	GKGCMC	2 cut(s)	320, 1183
BaeI	ACNNNNGTAYC	2 cut(s)	684, 717
BalI	TGGCCA	1 cut(s)	1045
BanII	GRGCYC	2 cut(s)	320, 1411
BbsI	GAAGAC	5 cut(s)	539, 669, 1086, 1148, 1346
Bbv12I	GWGCWC	5 cut(s)	297, 1162, 1183, 1392, 1411
BbvI	GCAGC	9 cut(s)	196, 199, 202, 205, 208, 892, 895, 1156, 1201
BccI	CCATC	5 cut(s)	484, 566, 1015, 1309, 1376
BceAI	ACGGC	1 cut(s)	1337
BciT130I	CCWGG	1 cut(s)	1042
BfaI	CTAG	5 cut(s)	326, 615, 828, 1187, 1404
BfmI	CTRYAG	1 cut(s)	468
BfuAI	ACCTGC	1 cut(s)	694
BglII	AGATCT	1 cut(s)	373
BisI	GCNGC	9 cut(s)	210, 213, 216, 219, 222, 906, 909, 1170, 1215
BlnI	CCTAGG	1 cut(s)	614
BlsI	GCNGC	9 cut(s)	211, 214, 217, 220, 223, 907, 910, 1171, 1216
BmcAI	AGTACT	1 cut(s)	483
Bme1390I	CCNGG	1 cut(s)	1042
Bme18I	GGWCC	1 cut(s)	278
BmeT110I	CYCGRG	1 cut(s)	440
BmgT120I	GGNCC	4 cut(s)	55, 278, 316, 317
BmiI	GGNNCC	5 cut(s)	317, 318, 709, 963, 1335
BmrFI	CCNGG	1 cut(s)	1042
BmrI	ACTGGG	1 cut(s)	1146
BmuI	ACTGGG	1 cut(s)	1146
BpiI	GAAGAC	5 cut(s)	539, 669, 1086, 1148, 1346
BplI	GAGNNNNNCTC	2 cut(s)	830, 862
Bpu10I	CCTNAGC	1 cut(s)	1239
Bpu14I	TTCGAA	1 cut(s)	104
BpuEI	CTTGAG	1 cut(s)	1034
BsaAI	YACGTR	1 cut(s)	587
BsaHI	GRCGYC	1 cut(s)	437
BsaJI	CCNNGG	5 cut(s)	441, 614, 834, 1040, 1412
BsaXI	ACNNNNNCTCC	2 cut(s)	991, 1021
Bsc4I	CCNNNNNNNGG	2 cut(s)	993, 1190
Bse118I	RCCGGY	1 cut(s)	49
Bse1I	ACTGG	2 cut(s)	638, 1141
Bse21I	CCTNAGG	1 cut(s)	757
BseBI	CCWGG	1 cut(s)	1042
BseDI	CCNNGG	5 cut(s)	441, 614, 834, 1040, 1412
BseGI	GGATG	3 cut(s)	818, 1320, 1384
BseLI	CCNNNNNNNGG	2 cut(s)	993, 1190
BseMII	CTCAG	4 cut(s)	374, 861, 1230, 1299
BseNI	ACTGG	2 cut(s)	638, 1141
BsePI	GCGCGC	1 cut(s)	62
BseRI	GAGGAG	1 cut(s)	414
BseSI	GKGCMC	2 cut(s)	320, 1183
BseXI	GCAGC	9 cut(s)	196, 199, 202, 205, 208, 892, 895, 1156, 1201
Bsh1236I	CGCG	2 cut(s)	64, 434
BshFI	GGCC	4 cut(s)	56, 318, 1045, 1093
BsiHKAI	GWGCWC	5 cut(s)	297, 1162, 1183, 1392, 1411
BsiHKCI	CYCGRG	1 cut(s)	440
BsiSI	CCGG	2 cut(s)	34, 50
BslFI	GGGAC	1 cut(s)	249
BslI	CCNNNNNNNGG	2 cut(s)	993, 1190
BsmFI	GGGAC	1 cut(s)	249
BsmI	GAATGC	1 cut(s)	1031
BsnI	GGCC	4 cut(s)	56, 318, 1045, 1093
BsoBI	CYCGRG	1 cut(s)	440
Bsp119I	TTCGAA	1 cut(s)	104
Bsp120I	GGGCCC	1 cut(s)	316
Bsp1286I	GDGCHC	6 cut(s)	297, 320, 1162, 1183, 1392, 1411
Bsp1407I	TGTACA	3 cut(s)	595, 803, 1203
Bsp143I	GATC	3 cut(s)	349, 373, 543
BspACI	CCGC	1 cut(s)	432
BspANI	GGCC	4 cut(s)	56, 318, 1045, 1093
BspCNI	CTCAG	4 cut(s)	373, 860, 1231, 1300
BspFNI	CGCG	2 cut(s)	64, 434
BspLI	GGNNCC	5 cut(s)	317, 318, 709, 963, 1335
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	2 cut(s)	357, 551
BspQI	GCTCTTC	1 cut(s)	101
BspT104I	TTCGAA	1 cut(s)	104
BsrFI	RCCGGY	1 cut(s)	49
BsrGI	TGTACA	3 cut(s)	595, 803, 1203
BsrI	ACTGG	2 cut(s)	638, 1141
BssAI	RCCGGY	1 cut(s)	49
BssECI	CCNNGG	5 cut(s)	441, 614, 834, 1040, 1412
BssHII	GCGCGC	1 cut(s)	62
BssMI	GATC	3 cut(s)	349, 373, 543
BssNI	GRCGYC	1 cut(s)	437
BssT1I	CCWWGG	3 cut(s)	614, 834, 1412
Bst2UI	CCWGG	1 cut(s)	1042
Bst4CI	ACNGT	6 cut(s)	517, 700, 1073, 1085, 1164, 1394
Bst6I	CTCTTC	2 cut(s)	101, 1056
BstACI	GRCGYC	1 cut(s)	437
BstAPI	GCANNNNNTGC	1 cut(s)	1229
BstAUI	TGTACA	3 cut(s)	595, 803, 1203
BstBAI	YACGTR	1 cut(s)	587
BstBI	TTCGAA	1 cut(s)	104
BstC8I	GCNNGC	3 cut(s)	64, 1212, 1388
BstDEI	CTNAG	7 cut(s)	141, 360, 757, 823, 847, 1239, 1308
BstF5I	GGATG	3 cut(s)	818, 1320, 1384
BstFNI	CGCG	2 cut(s)	64, 434
BstHHI	GCGC	3 cut(s)	49, 64, 66
BstKTI	GATC	3 cut(s)	352, 376, 546
BstMBI	GATC	3 cut(s)	349, 373, 543
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 215, 218, 221, 905, 1166, 1178, 1220, 1229
BstNI	CCWGG	1 cut(s)	1042
BstNSI	RCATGY	6 cut(s)	122, 174, 554, 596, 946, 1210
BstSCI	CCNGG	1 cut(s)	1040
BstSFI	CTRYAG	1 cut(s)	468
BstSLI	GKGCMC	2 cut(s)	320, 1183
BstUI	CGCG	2 cut(s)	64, 434
BstV1I	GCAGC	9 cut(s)	196, 199, 202, 205, 208, 892, 895, 1156, 1201
BstV2I	GAAGAC	5 cut(s)	539, 669, 1086, 1148, 1346
BstX2I	RGATCY	2 cut(s)	349, 373
BstYI	RGATCY	2 cut(s)	349, 373
Bsu36I	CCTNAGG	1 cut(s)	757
BsuRI	GGCC	4 cut(s)	56, 318, 1045, 1093
BtsCI	GGATG	3 cut(s)	818, 1320, 1384
BtsIMutI	CAGTG	1 cut(s)	74
BveI	ACCTGC	1 cut(s)	694
Cac8I	GCNNGC	3 cut(s)	64, 1212, 1388
CfoI	GCGC	3 cut(s)	49, 64, 66
Cfr10I	RCCGGY	1 cut(s)	49
Cfr13I	GGNCC	4 cut(s)	55, 278, 316, 317
CseI	GACGC	2 cut(s)	445, 935
Csp6I	GTAC	6 cut(s)	482, 580, 596, 693, 804, 1204
CspCI	CAANNNNNGTGG	2 cut(s)	939, 974
CviQI	GTAC	6 cut(s)	482, 580, 596, 693, 804, 1204
DdeI	CTNAG	7 cut(s)	141, 360, 757, 823, 847, 1239, 1308
DpnI	GATC	3 cut(s)	351, 375, 545
DpnII	GATC	3 cut(s)	349, 373, 543
EaeI	YGGCCR	1 cut(s)	1043
Eam1104I	CTCTTC	2 cut(s)	101, 1056
EarI	CTCTTC	2 cut(s)	101, 1056
Ecl136II	GAGCTC	1 cut(s)	1409
Eco130I	CCWWGG	3 cut(s)	614, 834, 1412
Eco24I	GRGCYC	2 cut(s)	320, 1411
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	1 cut(s)	278
Eco53kI	GAGCTC	1 cut(s)	1409
Eco81I	CCTNAGG	1 cut(s)	757
Eco88I	CYCGRG	1 cut(s)	440
EcoICRI	GAGCTC	1 cut(s)	1409
EcoO109I	RGGNCCY	2 cut(s)	316, 317
EcoRII	CCWGG	1 cut(s)	1040
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	3 cut(s)	614, 834, 1412
EcoT22I	ATGCAT	1 cut(s)	1111
EcoT38I	GRGCYC	2 cut(s)	320, 1411
ErhI	CCWWGG	3 cut(s)	614, 834, 1412
FaqI	GGGAC	1 cut(s)	249
FauNDI	CATATG	1 cut(s)	1111
FblI	GTMKAC	1 cut(s)	555
Fnu4HI	GCNGC	9 cut(s)	210, 213, 216, 219, 222, 906, 909, 1170, 1215
FokI	GGATG	3 cut(s)	825, 1327, 1391
FriOI	GRGCYC	2 cut(s)	320, 1411
Fsp4HI	GCNGC	9 cut(s)	210, 213, 216, 219, 222, 906, 909, 1170, 1215
FspBI	CTAG	5 cut(s)	326, 615, 828, 1187, 1404
GlaI	GCGC	3 cut(s)	48, 63, 65
GluI	GCNGC	9 cut(s)	210, 213, 216, 219, 222, 906, 909, 1170, 1215
HaeIII	GGCC	4 cut(s)	56, 318, 1045, 1093
HapII	CCGG	2 cut(s)	34, 50
HgaI	GACGC	2 cut(s)	445, 935
HhaI	GCGC	3 cut(s)	49, 64, 66
Hin1I	GRCGYC	1 cut(s)	437
Hin6I	GCGC	3 cut(s)	47, 62, 64
HinP1I	GCGC	3 cut(s)	47, 62, 64
HindIII	AAGCTT	1 cut(s)	1359
HinfI	GANTC	7 cut(s)	4, 176, 969, 983, 1144, 1153, 1196
HpaII	CCGG	2 cut(s)	34, 50
HphI	GGTGA	3 cut(s)	107, 1030, 1205
Hpy166II	GTNNAC	5 cut(s)	98, 254, 556, 598, 1181
Hpy188I	TCNGA	7 cut(s)	9, 310, 792, 869, 979, 1152, 1368
Hpy188III	TCNNGA	5 cut(s)	326, 347, 541, 642, 1238
Hpy8I	GTNNAC	5 cut(s)	98, 254, 556, 598, 1181
Hpy99I	CGWCG	1 cut(s)	439
HpyAV	CCTTC	5 cut(s)	118, 305, 445, 803, 1104
HpyCH4III	ACNGT	6 cut(s)	517, 700, 1073, 1085, 1164, 1394
HpyCH4IV	ACGT	3 cut(s)	68, 578, 586
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 215, 218, 221, 905, 1166, 1178, 1220, 1229
HpyF3I	CTNAG	7 cut(s)	141, 360, 757, 823, 847, 1239, 1308
HpySE526I	ACGT	3 cut(s)	68, 578, 586
Hsp92I	GRCGYC	1 cut(s)	437
HspAI	GCGC	3 cut(s)	47, 62, 64
Kzo9I	GATC	3 cut(s)	349, 373, 543
LguI	GCTCTTC	1 cut(s)	101
LmnI	GCTCC	4 cut(s)	389, 916, 967, 1414
Lsp1109I	GCAGC	9 cut(s)	196, 199, 202, 205, 208, 892, 895, 1156, 1201
MaeI	CTAG	5 cut(s)	326, 615, 828, 1187, 1404
MaeII	ACGT	3 cut(s)	68, 578, 586
MaeIII	GTNAC	2 cut(s)	193, 1303
MalI	GATC	3 cut(s)	351, 375, 545
MboI	GATC	3 cut(s)	349, 373, 543
MfeI	CAATTG	1 cut(s)	1218
MflI	RGATCY	2 cut(s)	349, 373
MhlI	GDGCHC	6 cut(s)	297, 320, 1162, 1183, 1392, 1411
MlsI	TGGCCA	1 cut(s)	1045
MluCI	AATT	7 cut(s)	560, 627, 799, 930, 951, 1048, 1218
MluNI	TGGCCA	1 cut(s)	1045
MlyI	GAGTC	4 cut(s)	13, 185, 963, 1138
MmeI	TCCRAC	3 cut(s)	452, 657, 682
Mox20I	TGGCCA	1 cut(s)	1045
Mph1103I	ATGCAT	1 cut(s)	1111
MroXI	GAANNNNTTC	1 cut(s)	536
MscI	TGGCCA	1 cut(s)	1045
MseI	TTAA	1 cut(s)	954
MslI	CAYNNNNRTG	2 cut(s)	1114, 1205
Msp20I	TGGCCA	1 cut(s)	1045
MspA1I	CMGCKG	1 cut(s)	1214
MspI	CCGG	2 cut(s)	34, 50
MspR9I	CCNGG	1 cut(s)	1042
MunI	CAATTG	1 cut(s)	1218
Mva1269I	GAATGC	1 cut(s)	1031
MvaI	CCWGG	1 cut(s)	1042
MvnI	CGCG	2 cut(s)	64, 434
MwoI	GCNNNNNNNGC	9 cut(s)	53, 215, 218, 221, 905, 1166, 1178, 1220, 1229
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	3 cut(s)	349, 373, 543
NlaIV	GGNNCC	5 cut(s)	317, 318, 709, 963, 1335
NsiI	ATGCAT	1 cut(s)	1111
NspI	RCATGY	6 cut(s)	122, 174, 554, 596, 946, 1210
NspV	TTCGAA	1 cut(s)	104
PauI	GCGCGC	1 cut(s)	62
PciI	ACATGT	1 cut(s)	550
PciSI	GCTCTTC	1 cut(s)	101
PctI	GAATGC	1 cut(s)	1031
PdmI	GAANNNNTTC	1 cut(s)	536
PfeI	GAWTC	3 cut(s)	983, 1153, 1196
PkrI	GCNGC	9 cut(s)	211, 214, 217, 220, 223, 907, 910, 1171, 1216
PleI	GAGTC	4 cut(s)	12, 184, 963, 1138
PpsI	GAGTC	4 cut(s)	12, 184, 963, 1138
Ppu21I	YACGTR	1 cut(s)	587
PscI	ACATGT	1 cut(s)	550
PshBI	ATTAAT	1 cut(s)	954
Psp124BI	GAGCTC	1 cut(s)	1411
Psp6I	CCWGG	1 cut(s)	1040
PspGI	CCWGG	1 cut(s)	1040
PspN4I	GGNNCC	5 cut(s)	317, 318, 709, 963, 1335
PspOMI	GGGCCC	1 cut(s)	316
PspPI	GGNCC	4 cut(s)	55, 278, 316, 317
PsuI	RGATCY	2 cut(s)	349, 373
PteI	GCGCGC	1 cut(s)	62
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	6 cut(s)	483, 581, 597, 694, 805, 1205
RsaNI	GTAC	6 cut(s)	482, 580, 596, 693, 804, 1204
RseI	CAYNNNNRTG	2 cut(s)	1114, 1205
SacI	GAGCTC	1 cut(s)	1411
SapI	GCTCTTC	1 cut(s)	101
SaqAI	TTAA	1 cut(s)	954
SatI	GCNGC	9 cut(s)	210, 213, 216, 219, 222, 906, 909, 1170, 1215
Sau3AI	GATC	3 cut(s)	349, 373, 543
Sau96I	GGNCC	4 cut(s)	55, 278, 316, 317
ScaI	AGTACT	1 cut(s)	483
SchI	GAGTC	4 cut(s)	13, 185, 963, 1138
ScrFI	CCNGG	1 cut(s)	1042
SduI	GDGCHC	6 cut(s)	297, 320, 1162, 1183, 1392, 1411
SfcI	CTRYAG	1 cut(s)	468
SfuI	TTCGAA	1 cut(s)	104
SgrAI	CRCCGGYG	1 cut(s)	49
SinI	GGWCC	1 cut(s)	278
SmiMI	CAYNNNNRTG	2 cut(s)	1114, 1205
SmlI	CTYRAG	1 cut(s)	1013
SmoI	CTYRAG	1 cut(s)	1013
Sse9I	AATT	7 cut(s)	560, 627, 799, 930, 951, 1048, 1218
SsiI	CCGC	1 cut(s)	432
SspMI	CTAG	5 cut(s)	326, 615, 828, 1187, 1404
SstI	GAGCTC	1 cut(s)	1411
StyD4I	CCNGG	1 cut(s)	1040
StyI	CCWWGG	3 cut(s)	614, 834, 1412
TaaI	ACNGT	6 cut(s)	517, 700, 1073, 1085, 1164, 1394
TaiI	ACGT	3 cut(s)	71, 581, 589
TaqI	TCGA	3 cut(s)	104, 1059, 1156
TasI	AATT	7 cut(s)	560, 627, 799, 930, 951, 1048, 1218
TatI	WGTACW	4 cut(s)	481, 595, 803, 1203
TfiI	GAWTC	3 cut(s)	983, 1153, 1196
Tru1I	TTAA	1 cut(s)	954
Tru9I	TTAA	1 cut(s)	954
TscAI	CASTG	1 cut(s)	81
TseI	GCWGC	9 cut(s)	209, 212, 215, 218, 221, 905, 908, 1169, 1214
TspDTI	ATGAA	4 cut(s)	464, 639, 675, 845
TspRI	CASTG	1 cut(s)	81
VneI	GTGCAC	1 cut(s)	1179
VpaK11BI	GGWCC	1 cut(s)	278
VspI	ATTAAT	1 cut(s)	954
XapI	RAATTY	1 cut(s)	1048
XbaI	TCTAGA	1 cut(s)	325
XceI	RCATGY	6 cut(s)	122, 174, 554, 596, 946, 1210
XmaJI	CCTAGG	1 cut(s)	614
XmiI	GTMKAC	1 cut(s)	555
XmnI	GAANNNNTTC	1 cut(s)	536
XspI	CTAG	5 cut(s)	326, 615, 828, 1187, 1404
ZrmI	AGTACT	1 cut(s)	483
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.