Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000530.1

Orthogroup ID

OG0004829

Physical Location & Seq

Genomic Coordinates Forward (+)

133242 .. 141327

Gene Structure 8086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000530.1_g000039.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

atggtatgcccattgtatcaatgtaggcatagtgatcctaaagctgcagttaaggatggtaggagttttttggctgcagaagatggcaagaccgatgtctatcccctacaactgaggctttctgttccacgagaaacaaattcattgggagtaagaattaccaaaaaggataatgcagttgagtccttcaaaagagcctgcaaaatcttcagtttggagtctgacttgttacgcatctgggacttttccggccagactaacttattttttacaaatgacaaaaccaagtttccaagagacttgcaacggcattcagatgagatcctactggagttgcaagtttatggattgtcagattccatcaagtgtagggaagggaaaaaagatgagatggccatgcaacattctaccattggaagttcttgttctggttcttcagttgtgatgaatggttctgctggcaatatgcattccaatttcattcgttcattctggggaagttcttgtgaagctggttctttagggttgacaggattgcaaaaccttggaaatacttgtttcatgaatagctccatccagtgcttagcccatacaccaaagcttgttgactattttcttggagattatgcaagagaaataaatcaggaaaacccattgggcatggatggggagattgctttagcatttggagatctgttaaggaagttatgggctcctggagcaactcctgtgcctccaaggacctttaaatcaaaacttgctcgttttgctcctcagtttaatggctttaatcaacatgattcacaagaactcctggcctttttgttggatggacttcatgaagatcttaatcgtgtgaaatgcaagccttatgtagaagtcaaggatggtgatgatcgaccggatgaagaggtagctgatgaatattggcgaaatcatttagcccgcaatgactcgatcattgttgatgtgtgccaaggtcaatataaatcaacattagtttgtcctgtttgcaaaaaggtctctgttacatttgatccgtttatgtacctgtcactaccattaccttcaacaatgatgcggacaatgactttaacagttgtcaacactgatggaagttcgaagccatctgaatataccattaatgtgcccaagcatggaaagtttgatgatctcatccgcagtttgagtgttgcatgctcacttggagttgatgaaacctttttagtggccgagatatacaacaatcgcattatacgttatctcgaggagcctgctgattcgttatccttaattagagatggtgacctgttggttgcttatcggtttatgaaagatgttgaggaagtacctctggttgttttcatgcatcaacaaatggagcaggacatgcatgggaagttgagttcaagctggaaaccgtttggaattcctcttgtatcaagactttgtacttcggcaactggatctgatatctgctatcagtacttaaacttagttaagccatttcaaatacctggaaaagattcccaagcacttgttgataattcacagggcacctctcccatagaggccactggagcagagggtaccgcacctcctgtttcaggtggggatgtgaacctctgttatgaaaatggggctgactcaccgttggattgtgaatttcagttttatataacagatgaaaagggtattcaaaaggagaaaaagatagtaatgaatgagatggtcgagaggaaaatgtcagagcatttatatgttgcagtatgttggccagaaaaatatgttgagcagtatgatactcgcgttctgagctcattgccgtcggttttcaagcctggccttttttcgaaaaagcctcaggagactgtttctctatataagtgccttgaagcattcttgaaggaggagcctcttgggccagaagacatgtggtattgtcctggctgcaaaaagcattgccaagccagtaagaagttggatctctggagactgcctgagatcttggtcattcatttaaagcggttctcatatagtcgattcttcaagaacaagctagagacatatgttgacttccctgttgataatctggatttgtcaacatacattgcttacaggactggtgaattaagcaatctttacatgctttatgcagttagtaatcactatggaagcatgggtggcggtcattatactgcatttgtccatcatgggggcgatcggtggtatgactttgatgatagccatgttagccctgtgagccaggacaagataaagtctgctgctgcgtatgttcttttctataggagagtagtagaagtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

UCH

Protein Analysis

775

Amino Acids

87.43

Weight (kDa)

5.76

Isoelectric Point (pI)

40.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22030 AT5G22030
fragaria_vesca	FvH4_3g26140 FvH4_3g26140 FvH4_3g26140 FvH4_3g26140 FvH4_3g26140 FvH4_3g26140 FvH4_3g26140
malus_domestica	MD03G1159600.v1.1 MD11G1174900.v1.1
prunus_persica	Prupe.6G147300_v2.0.a1 Prupe.6G147300_v2.0.a1 Prupe.6G147300_v2.0.a1 Prupe.6G147300_v2.0.a1
pyrus_communis	pycom03g11220 pycom03g11230 pycom11g14960 pycom11g14970
rosa_chinensis	RchiOBHm_Chr5g0049121
rosa_laevigata	RLG00000034590
rosa_multiflora	Rmu_sc0000530.1_g000038 Rmu_sc0000530.1_g000039
rosa_roxburghii	Rroxscaffold_1G00032700
rosa_rugosa	Rorug05G0243300 Rorug05G0243300
rosa_samantha	Rh5AG322700 Rh5BG333300 Rh5CG358200 Rh5DG344700
rosa_wichuraiana	Rw5G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1589
AccB1I	GGYRCC	2 cut(s)	1556, 1589
AccII	CGCG	1 cut(s)	1809
AciI	CCGC	6 cut(s)	946, 1081, 1180, 1593, 2026, 2187
AclWI	GGATC	5 cut(s)	29, 316, 1031, 1474, 1992
AcoI	YGGCCR	4 cut(s)	250, 393, 1230, 1775
AcsI	RAATTY	3 cut(s)	139, 1428, 1664
AcuI	CTGAAG	2 cut(s)	193, 420
AfaI	GTAC	5 cut(s)	1049, 1350, 1453, 1487, 1591
AfiI	CCNNNNNNNGG	3 cut(s)	1157, 1607, 2215
AflIII	ACRYGT	1 cut(s)	1932
AgsI	TTSAA	9 cut(s)	190, 1071, 1410, 1511, 1700, 1837, 1895, 1906, 2050
AjnI	CCWGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
AloI	GAACNNNNNNTCC	2 cut(s)	1390, 1422
AluBI	AGCT	8 cut(s)	44, 512, 570, 601, 917, 1413, 1818, 2059
AluI	AGCT	8 cut(s)	44, 512, 570, 601, 917, 1413, 1818, 2059
Alw21I	GWGCWC	1 cut(s)	1820
Alw26I	GTCTC	5 cut(s)	291, 1027, 1862, 1987, 2057
AlwI	GGATC	5 cut(s)	29, 316, 1031, 1474, 1992
Ama87I	CYCGRG	1 cut(s)	1265
AoxI	GGCC	8 cut(s)	250, 393, 816, 1230, 1572, 1775, 1843, 1922
ApeKI	GCWGC	5 cut(s)	44, 74, 1950, 2285, 2288
ApoI	RAATTY	3 cut(s)	139, 1428, 1664
AseI	ATTAAT	1 cut(s)	1143
Asp700I	GAANNNNTTC	1 cut(s)	1525
Asp718I	GGTACC	1 cut(s)	1589
AspS9I	GGNCC	2 cut(s)	741, 1922
AsuHPI	GGTGA	4 cut(s)	902, 1316, 1641, 2138
AsuII	TTCGAA	2 cut(s)	1121, 1853
AvaI	CYCGRG	1 cut(s)	1265
AvaII	GGWCC	1 cut(s)	741
AxyI	CCTNAGG	1 cut(s)	1863
BaeGI	GKGCMC	2 cut(s)	1152, 1559
BaeI	ACNNNNGTAYC	2 cut(s)	1794, 1827
BalI	TGGCCA	2 cut(s)	395, 1777
BanI	GGYRCC	2 cut(s)	1556, 1589
BanII	GRGCYC	2 cut(s)	715, 1820
BauI	CACGAG	1 cut(s)	129
BbsI	GAAGAC	1 cut(s)	1935
Bbv12I	GWGCWC	1 cut(s)	1820
BbvI	GCAGC	5 cut(s)	31, 61, 1937, 2272, 2275
BceAI	ACGGC	2 cut(s)	323, 1810
BcgI	CGANNNNNNTGC	2 cut(s)	1256, 1290
BciT130I	CCWGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
BcoDI	GTCTC	5 cut(s)	291, 1027, 1862, 1987, 2057
BfaI	CTAG	1 cut(s)	2060
BfmI	CTRYAG	3 cut(s)	45, 75, 2305
BglI	GCCNNNNNGGC	1 cut(s)	1921
BglII	AGATCT	3 cut(s)	691, 844, 2004
BisI	GCNGC	5 cut(s)	45, 75, 1951, 2286, 2289
BlpI	GCTNAGC	1 cut(s)	583
BlsI	GCNGC	5 cut(s)	46, 76, 1952, 2287, 2290
BmcAI	AGTACT	1 cut(s)	1487
Bme1390I	CCNGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
Bme18I	GGWCC	1 cut(s)	741
BmeT110I	CYCGRG	1 cut(s)	1265
BmgT120I	GGNCC	2 cut(s)	741, 1922
BmiI	GGNNCC	5 cut(s)	714, 1272, 1558, 1591, 1914
BmrFI	CCNGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
BmsI	GCATC	3 cut(s)	243, 1068, 1378
BoxI	GACNNNNGTC	1 cut(s)	95
BpiI	GAAGAC	1 cut(s)	1935
BpmI	CTGGAG	4 cut(s)	350, 738, 1599, 2011
Bpu1102I	GCTNAGC	1 cut(s)	583
Bpu14I	TTCGAA	2 cut(s)	1121, 1853
BsaBI	GATNNNNATC	2 cut(s)	99, 849
BsaI	GGTCTC	1 cut(s)	1027
BsaJI	CCNNGG	3 cut(s)	544, 737, 976
BsaWI	WCCGGW	1 cut(s)	901
BsaXI	ACNNNNNCTCC	4 cut(s)	795, 825, 1582, 1612
Bsc4I	CCNNNNNNNGG	3 cut(s)	1157, 1607, 2215
Bse1I	ACTGG	6 cut(s)	333, 577, 1468, 1582, 1971, 2128
Bse21I	CCTNAGG	1 cut(s)	1863
Bse3DI	GCAATG	4 cut(s)	955, 1820, 1960, 2109
Bse8I	GATNNNNATC	2 cut(s)	99, 849
BseBI	CCWGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
BseDI	CCNNGG	3 cut(s)	544, 737, 976
BseGI	GGATG	8 cut(s)	61, 573, 670, 835, 892, 910, 1176, 1621
BseJI	GATNNNNATC	2 cut(s)	99, 849
BseLI	CCNNNNNNNGG	3 cut(s)	1157, 1607, 2215
BseMI	GCAATG	4 cut(s)	955, 1820, 1960, 2109
BseMII	CTCAG	5 cut(s)	104, 788, 1805, 1877, 1992
BseNI	ACTGG	6 cut(s)	333, 577, 1468, 1582, 1971, 2128
BseRI	GAGGAG	3 cut(s)	762, 1283, 1925
BseSI	GKGCMC	2 cut(s)	1152, 1559
BseXI	GCAGC	5 cut(s)	31, 61, 1937, 2272, 2275
Bsh1236I	CGCG	1 cut(s)	1809
Bsh1285I	CGRYCG	2 cut(s)	902, 2224
BshFI	GGCC	8 cut(s)	252, 395, 818, 1232, 1574, 1777, 1845, 1924
BshNI	GGYRCC	2 cut(s)	1556, 1589
BsiEI	CGRYCG	2 cut(s)	902, 2224
BsiHKAI	GWGCWC	1 cut(s)	1820
BsiHKCI	CYCGRG	1 cut(s)	1265
BsiSI	CCGG	2 cut(s)	249, 902
BslFI	GGGAC	1 cut(s)	254
BslI	CCNNNNNNNGG	3 cut(s)	1157, 1607, 2215
BsmAI	GTCTC	5 cut(s)	291, 1027, 1862, 1987, 2057
BsmFI	GGGAC	1 cut(s)	254
BsmI	GAATGC	3 cut(s)	310, 469, 1898
BsnI	GGCC	8 cut(s)	252, 395, 818, 1232, 1574, 1777, 1845, 1924
Bso31I	GGTCTC	1 cut(s)	1027
BsoBI	CYCGRG	1 cut(s)	1265
Bsp119I	TTCGAA	2 cut(s)	1121, 1853
Bsp1286I	GDGCHC	4 cut(s)	715, 1152, 1559, 1820
Bsp1720I	GCTNAGC	1 cut(s)	583
BspACI	CCGC	6 cut(s)	946, 1081, 1180, 1593, 2026, 2187
BspANI	GGCC	8 cut(s)	252, 395, 818, 1232, 1574, 1777, 1845, 1924
BspCNI	CTCAG	5 cut(s)	105, 787, 1806, 1876, 1993
BspFNI	CGCG	1 cut(s)	1809
BspHI	TCATGA	2 cut(s)	561, 838
BspLI	GGNNCC	5 cut(s)	714, 1272, 1558, 1591, 1914
BspMAI	CTGCAG	2 cut(s)	49, 79
BspPI	GGATC	5 cut(s)	29, 316, 1031, 1474, 1992
BspT104I	TTCGAA	2 cut(s)	1121, 1853
BspT107I	GGYRCC	2 cut(s)	1556, 1589
BspTNI	GGTCTC	1 cut(s)	1027
BsrDI	GCAATG	4 cut(s)	955, 1820, 1960, 2109
BsrI	ACTGG	6 cut(s)	333, 577, 1468, 1582, 1971, 2128
BssECI	CCNNGG	3 cut(s)	544, 737, 976
BssSI	CACGAG	1 cut(s)	129
BssT1I	CCWWGG	3 cut(s)	544, 737, 976
Bst2BI	CACGAG	1 cut(s)	129
Bst2UI	CCWGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
Bst4CI	ACNGT	4 cut(s)	1099, 1422, 1653, 1873
Bst6I	CTCTTC	1 cut(s)	903
BstAPI	GCANNNNNTGC	1 cut(s)	1390
BstBI	TTCGAA	2 cut(s)	1121, 1853
BstC8I	GCNNGC	6 cut(s)	199, 460, 866, 946, 1198, 1275
BstDEI	CTNAG	7 cut(s)	113, 583, 774, 1495, 1814, 1863, 2001
BstEII	GGTNACC	1 cut(s)	1304
BstENI	CCTNNNNNAGG	1 cut(s)	1605
BstF5I	GGATG	8 cut(s)	61, 573, 670, 835, 892, 910, 1176, 1621
BstFNI	CGCG	1 cut(s)	1809
BstMAI	GTCTC	5 cut(s)	291, 1027, 1862, 1987, 2057
BstMCI	CGRYCG	2 cut(s)	902, 2224
BstMWI	GCNNNNNNNGC	9 cut(s)	719, 767, 1390, 1580, 1815, 1921, 2184, 2253, 2262
BstNI	CCWGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
BstNSI	RCATGY	4 cut(s)	1200, 1393, 1936, 2149
BstPAI	GACNNNNGTC	1 cut(s)	95
BstPI	GGTNACC	1 cut(s)	1304
BstSCI	CCNGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
BstSFI	CTRYAG	3 cut(s)	45, 75, 2305
BstSLI	GKGCMC	2 cut(s)	1152, 1559
BstUI	CGCG	1 cut(s)	1809
BstV1I	GCAGC	5 cut(s)	31, 61, 1937, 2272, 2275
BstV2I	GAAGAC	1 cut(s)	1935
BstX2I	RGATCY	6 cut(s)	321, 691, 844, 1466, 1984, 2004
BstYI	RGATCY	6 cut(s)	321, 691, 844, 1466, 1984, 2004
Bsu36I	CCTNAGG	1 cut(s)	1863
BsuRI	GGCC	8 cut(s)	252, 395, 818, 1232, 1574, 1777, 1845, 1924
BtsCI	GGATG	8 cut(s)	61, 573, 670, 835, 892, 910, 1176, 1621
BtsIMutI	CAGTG	3 cut(s)	584, 1107, 1575
Cac8I	GCNNGC	6 cut(s)	199, 460, 866, 946, 1198, 1275
CciI	TCATGA	2 cut(s)	561, 838
Cfr13I	GGNCC	2 cut(s)	741, 1922
Csp6I	GTAC	5 cut(s)	1048, 1349, 1452, 1486, 1590
CviQI	GTAC	5 cut(s)	1048, 1349, 1452, 1486, 1590
DdeI	CTNAG	7 cut(s)	113, 583, 774, 1495, 1814, 1863, 2001
DraI	TTTAAA	2 cut(s)	748, 2022
EaeI	YGGCCR	4 cut(s)	250, 393, 1230, 1775
Eam1104I	CTCTTC	1 cut(s)	903
EarI	CTCTTC	1 cut(s)	903
Ecl136II	GAGCTC	1 cut(s)	1818
Eco130I	CCWWGG	3 cut(s)	544, 737, 976
Eco24I	GRGCYC	2 cut(s)	715, 1820
Eco31I	GGTCTC	1 cut(s)	1027
Eco32I	GATATC	1 cut(s)	1474
Eco47I	GGWCC	1 cut(s)	741
Eco53kI	GAGCTC	1 cut(s)	1818
Eco57I	CTGAAG	2 cut(s)	193, 420
Eco81I	CCTNAGG	1 cut(s)	1863
Eco88I	CYCGRG	1 cut(s)	1265
Eco91I	GGTNACC	1 cut(s)	1304
EcoICRI	GAGCTC	1 cut(s)	1818
EcoNI	CCTNNNNNAGG	1 cut(s)	1605
EcoO109I	RGGNCCY	1 cut(s)	741
EcoO65I	GGTNACC	1 cut(s)	1304
EcoRI	GAATTC	1 cut(s)	1428
EcoRII	CCWGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
EcoRV	GATATC	1 cut(s)	1474
EcoT14I	CCWWGG	3 cut(s)	544, 737, 976
EcoT22I	ATGCAT	3 cut(s)	471, 1371, 1395
EcoT38I	GRGCYC	2 cut(s)	715, 1820
ErhI	CCWWGG	3 cut(s)	544, 737, 976
FaqI	GGGAC	1 cut(s)	254
FauI	CCCGC	1 cut(s)	953
FauNDI	CATATG	1 cut(s)	2068
Fnu4HI	GCNGC	5 cut(s)	45, 75, 1951, 2286, 2289
FokI	GGATG	8 cut(s)	68, 560, 677, 842, 899, 917, 1163, 1628
FriOI	GRGCYC	2 cut(s)	715, 1820
Fsp4HI	GCNGC	5 cut(s)	45, 75, 1951, 2286, 2289
FspBI	CTAG	1 cut(s)	2060
GluI	GCNGC	5 cut(s)	45, 75, 1951, 2286, 2289
GsuI	CTGGAG	4 cut(s)	350, 738, 1599, 2011
HaeIII	GGCC	8 cut(s)	252, 395, 818, 1232, 1574, 1777, 1845, 1924
HapII	CCGG	2 cut(s)	249, 902
HincII	GTYRAC	5 cut(s)	528, 607, 1105, 2074, 2103
HindII	GTYRAC	5 cut(s)	528, 607, 1105, 2074, 2103
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	9 cut(s)	182, 218, 356, 800, 953, 1280, 1526, 1646, 2043
HpaII	CCGG	2 cut(s)	249, 902
HphI	GGTGA	4 cut(s)	902, 1316, 1641, 2138
Hpy166II	GTNNAC	6 cut(s)	528, 607, 1105, 1621, 2074, 2103
Hpy188I	TCNGA	7 cut(s)	223, 316, 355, 1132, 1471, 1750, 1815
Hpy8I	GTNNAC	6 cut(s)	528, 607, 1105, 1621, 2074, 2103
Hpy99I	CGWCG	1 cut(s)	1831
HpyAV	CCTTC	4 cut(s)	196, 368, 1077, 1900
HpyCH4III	ACNGT	4 cut(s)	1099, 1422, 1653, 1873
HpyCH4IV	ACGT	1 cut(s)	1258
HpyF10VI	GCNNNNNNNGC	9 cut(s)	719, 767, 1390, 1580, 1815, 1921, 2184, 2253, 2262
HpyF3I	CTNAG	7 cut(s)	113, 583, 774, 1495, 1814, 1863, 2001
HpySE526I	ACGT	1 cut(s)	1258
KpnI	GGTACC	1 cut(s)	1593
LmnI	GCTCC	8 cut(s)	575, 718, 719, 775, 1270, 1381, 1580, 1912
Lsp1109I	GCAGC	5 cut(s)	31, 61, 1937, 2272, 2275
LweI	GCATC	3 cut(s)	243, 1068, 1378
MaeI	CTAG	1 cut(s)	2060
MaeII	ACGT	1 cut(s)	1258
MaeIII	GTNAC	4 cut(s)	228, 1027, 1053, 1304
MboII	GAAGA	7 cut(s)	92, 199, 426, 854, 920, 1940, 2038
MflI	RGATCY	6 cut(s)	321, 691, 844, 1466, 1984, 2004
MhlI	GDGCHC	4 cut(s)	715, 1152, 1559, 1820
MlsI	TGGCCA	2 cut(s)	395, 1777
MluCI	AATT	8 cut(s)	139, 156, 475, 1293, 1428, 1546, 1664, 2129
MluNI	TGGCCA	2 cut(s)	395, 1777
MlyI	GAGTC	4 cut(s)	191, 227, 947, 1640
MmeI	TCCRAC	3 cut(s)	807, 1635, 1962
Mox20I	TGGCCA	2 cut(s)	395, 1777
Mph1103I	ATGCAT	3 cut(s)	471, 1371, 1395
MroXI	GAANNNNTTC	1 cut(s)	1525
MscI	TGGCCA	2 cut(s)	395, 1777
MslI	CAYNNNNRTG	3 cut(s)	315, 1145, 1758
Msp20I	TGGCCA	2 cut(s)	395, 1777
MspI	CCGG	2 cut(s)	249, 902
MspR9I	CCNGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
Mva1269I	GAATGC	3 cut(s)	310, 469, 1898
MvaI	CCWGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
MvnI	CGCG	1 cut(s)	1809
MwoI	GCNNNNNNNGC	9 cut(s)	719, 767, 1390, 1580, 1815, 1921, 2184, 2253, 2262
NdeI	CATATG	1 cut(s)	2068
NlaIV	GGNNCC	5 cut(s)	714, 1272, 1558, 1591, 1914
NmeAIII	GCCGAG	1 cut(s)	1258
NmuCI	GTSAC	2 cut(s)	1053, 1304
NsiI	ATGCAT	3 cut(s)	471, 1371, 1395
NspI	RCATGY	4 cut(s)	1200, 1393, 1936, 2149
NspV	TTCGAA	2 cut(s)	1121, 1853
PaeI	GCATGC	1 cut(s)	1200
PaeR7I	CTCGAG	1 cut(s)	1265
PagI	TCATGA	2 cut(s)	561, 838
PciI	ACATGT	1 cut(s)	1932
PcsI	WCGNNNNNNNCGW	1 cut(s)	1255
PctI	GAATGC	3 cut(s)	310, 469, 1898
PdmI	GAANNNNTTC	1 cut(s)	1525
PfeI	GAWTC	5 cut(s)	356, 800, 1280, 1526, 2043
PfoI	TCCNGGA	1 cut(s)	715
PkrI	GCNGC	5 cut(s)	46, 76, 1952, 2287, 2290
Ple19I	CGATCG	1 cut(s)	2224
PleI	GAGTC	4 cut(s)	190, 226, 947, 1640
PpsI	GAGTC	4 cut(s)	190, 226, 947, 1640
PpuMI	RGGWCCY	1 cut(s)	741
PscI	ACATGT	1 cut(s)	1932
PshAI	GACNNNNGTC	1 cut(s)	95
PshBI	ATTAAT	1 cut(s)	1143
Psp124BI	GAGCTC	1 cut(s)	1820
Psp5II	RGGWCCY	1 cut(s)	741
Psp6I	CCWGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
PspEI	GGTNACC	1 cut(s)	1304
PspGI	CCWGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
PspN4I	GGNNCC	5 cut(s)	714, 1272, 1558, 1591, 1914
PspPI	GGNCC	2 cut(s)	741, 1922
PspPPI	RGGWCCY	1 cut(s)	741
PstI	CTGCAG	2 cut(s)	49, 79
PsuI	RGATCY	6 cut(s)	321, 691, 844, 1466, 1984, 2004
PvuI	CGATCG	1 cut(s)	2224
RsaI	GTAC	5 cut(s)	1049, 1350, 1453, 1487, 1591
RsaNI	GTAC	5 cut(s)	1048, 1349, 1452, 1486, 1590
RseI	CAYNNNNRTG	3 cut(s)	315, 1145, 1758
SacI	GAGCTC	1 cut(s)	1820
SatI	GCNGC	5 cut(s)	45, 75, 1951, 2286, 2289
Sau96I	GGNCC	2 cut(s)	741, 1922
ScaI	AGTACT	1 cut(s)	1487
SchI	GAGTC	4 cut(s)	191, 227, 947, 1640
ScrFI	CCNGG	6 cut(s)	717, 815, 1518, 1842, 1947, 2267
SduI	GDGCHC	4 cut(s)	715, 1152, 1559, 1820
SfaNI	GCATC	3 cut(s)	243, 1068, 1378
SfcI	CTRYAG	3 cut(s)	45, 75, 2305
Sfr274I	CTCGAG	1 cut(s)	1265
SfuI	TTCGAA	2 cut(s)	1121, 1853
SinI	GGWCC	1 cut(s)	741
SlaI	CTCGAG	1 cut(s)	1265
SmiMI	CAYNNNNRTG	3 cut(s)	315, 1145, 1758
SmlI	CTYRAG	1 cut(s)	1265
SmoI	CTYRAG	1 cut(s)	1265
SphI	GCATGC	1 cut(s)	1200
Sse9I	AATT	8 cut(s)	139, 156, 475, 1293, 1428, 1546, 1664, 2129
SsiI	CCGC	6 cut(s)	946, 1081, 1180, 1593, 2026, 2187
SspI	AATATT	1 cut(s)	926
SspMI	CTAG	1 cut(s)	2060
SstI	GAGCTC	1 cut(s)	1820
StyD4I	CCNGG	6 cut(s)	715, 813, 1516, 1840, 1945, 2265
StyI	CCWWGG	3 cut(s)	544, 737, 976
TaaI	ACNGT	4 cut(s)	1099, 1422, 1653, 1873
TaiI	ACGT	1 cut(s)	1261
TaqI	TCGA	7 cut(s)	898, 956, 1121, 1266, 1734, 1853, 2041
TaqII	GACCGA	1 cut(s)	107
TasI	AATT	8 cut(s)	139, 156, 475, 1293, 1428, 1546, 1664, 2129
TatI	WGTACW	2 cut(s)	1451, 1485
TfiI	GAWTC	5 cut(s)	356, 800, 1280, 1526, 2043
TscAI	CASTG	3 cut(s)	584, 1114, 1582
TseFI	GTSAC	2 cut(s)	1053, 1304
TseI	GCWGC	5 cut(s)	44, 74, 1950, 2285, 2288
Tsp45I	GTSAC	2 cut(s)	1053, 1304
TspGWI	ACGGA	1 cut(s)	1029
TspRI	CASTG	3 cut(s)	584, 1114, 1582
VpaK11BI	GGWCC	1 cut(s)	741
VspI	ATTAAT	1 cut(s)	1143
XagI	CCTNNNNNAGG	1 cut(s)	1605
XapI	RAATTY	3 cut(s)	139, 1428, 1664
XceI	RCATGY	4 cut(s)	1200, 1393, 1936, 2149
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1932, 1978
XhoI	CTCGAG	1 cut(s)	1265
XmnI	GAANNNNTTC	1 cut(s)	1525
XspI	CTAG	1 cut(s)	2060
ZrmI	AGTACT	1 cut(s)	1487
Zsp2I	ATGCAT	3 cut(s)	471, 1371, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.