Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000554.1

Orthogroup ID

OG0011483

Physical Location & Seq

Genomic Coordinates Forward (+)

195703 .. 202313

Gene Structure 6611 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

atgatcaaagcgctcgcttttgttctgctcctagtcgccttcgtctccacgctttcacaagccaaattaagcatcctgcgaccccaacctgccacagggttcaacgtcagccatgtacagagtgccgggagttgttcttatacggttgatataaccaccagctgctcctcaacgaggtacacaagggatcaaatcagtatctcattcggggatggttatggcaaccagatttatgctccgcgactagacgatccatcctcgagaacgtttgagagttgttctacggacacatttgagatatatggaccctggctgtttcgttctactacaataccttcattcccagtgacatttggtatggattcaacttgtgccagaatgcttcctcttcacaccggcaatctgcttatggatgacgtttccgattatgtgctggaggctccgaagaaggagaagaagatgaaaaagtcgaaaaaggagtccataaccgactctccgattagtgagaagaagagcagtagcaagaaagagtcaaagctgaagaagcggaaagcgctggatatggaggccgacgacgaagacaggagcgagaccagctccgagctcggcgagcctgtcaatttgaagcccaacggcgattcttcggtggagaagagcaagaggaaatcgaagaaggccaaggtggaggaggaggaggagaaggttgaggtgaagaaggatgatcctaatgccgtaaccaagtttcggatttcgccgccgttgagggctaagctgaaggagaaggggatcgaggccttgtttacgattcaggccatgacgttcgacaccattttggacggggcggacttggtgggccgggctcgcaccggtcagggtaaaactctggcttttgtgttgcctatattggagtcgttaacaaatggttctgctaaagaatttcgaaagactggatacggcagagcaccgactgttattgttcttttacccaccagggagttggccaagcaggtgtttgcggactttgaattttatggtggtgctgtggggttagcatcgtgttgtgtatatggtggatctccttacgcagctcaagaatataagttgaagagaggggttgatgtcattgtgggaacacctggtcgtatcaaggatcatattgagagggggaatatagacttgagcactttgaagtttcgggtccttgatgaagctgatgaaatgctgaggatgggttttgttgatgacgttgaacaaattctaggcaaggtcaaagatgtaactaaagttcaaacgcttctcttcagtgcaactttaccctcttgggtgcaaaatatttccaaaaggtttcttaaatcagataagaaaactgcagatctggttggtaatgaaaagatgaaggccagcgtcaatgttaggcatattgttcttccttgctctagttcagctagagtagacgttattcctgatatcattcgttgttatagcagtggaggtcgcactattattttcactgagacaaaggattgtgcttctgagctttctgagaggttgcatggagcaagacctttgcacggggacatacagcaaggtcagcgggaggtcacacttgcaggtttcaggtctggcaaattttcgacattagtagccacaaatgtggcagctcgtggactggatatcaatgatgttcaattaattattcagtgtgaacctccacgtgatgtagaagactatatccatcgatccggacgcacagggagagccggcaattctggagttgctgtaatgctttatgaccctagaaagtcaaacatatcaaagatcgaaagagaatctggggtaaaatttgagcatgtttctgctcctcagccaattgacgttgccaaagctgcaggtcttagtgcagcagaaatgattactaatgtctctgatagcgtaattcctgcattcaagagtgttgctgaggagcttctaaacacctcaggcctatctgcagtagatctactgtcaaaggctcttgctaaggctgctggctacaccgatgtaaagaagaggtcacttctgagttctatggagaaccatgtcaccatactgcttgaagctggaaagcccatttacacagcatcttttgcttattcggccttgaggaggttcttgccggaggagaaggtcgagtcagtgaagggtatggcgctaacaactgatggaaagggtgcagtgtttgatgtagctgctgaagatttggatatgtttcttactggttcgcaaaatgcagctggtatcagcatacaggtcttggactctttgccgagtttacaagaaaaagaagcaaggggaggaagatttggcggtggtggccgtggtggtagtaggtttggtggaagaggaggtggcaggggtttctctaatggaagaaatgataggtttggtggcggcggtggcagaggccgcggcaactacaacaggtggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

DEAD GUCT Helicase_C

Protein Analysis

822

Amino Acids

89.29

Weight (kDa)

9.06

Isoelectric Point (pI)

37.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATS3	PF06232	40 - 103	3.3e-23	Embryo-specific protein 3, (ATS3)
DEAD	PF00270	268 - 444	2.7e-44	DEAD/DEAH box helicase
Helicase_C	PF00271	484 - 588	2.5e-27	Helicase conserved C-terminal domain
DD_DDX21-DDX50	PF26142	622 - 674	1.7e-18	DDX21/DDX50 dimerisation domain
GUCT	PF08152	677 - 772	2.6e-28	GUCT (NUC152) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011483)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62190
fragaria_vesca	FvH4_7g28410
malus_domestica	MD01G1187800.v1.1 MD07G1259900.v1.1 MD07G1260300.v1.1
prunus_persica	Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1 Prupe.2G284200_v2.0.a1
pyrus_communis	pycom07g23330
rosa_chinensis	RchiOBHm_Chr1g0375371
rosa_laevigata	RLG00000026667
rosa_multiflora	Rmu_sc0000554.1_g000041 Rmu_ssc0000106.1_g000003
rosa_roxburghii	Rroxscaffold_4G00282810
rosa_rugosa	Rorug01G0390800
rosa_samantha	Rh1AG401100 Rh1BG363200 Rh1CG376500 Rh1DG394000
rosa_wichuraiana	Rw1G035610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	997
Acc36I	ACCTGC	4 cut(s)	97, 997, 1601, 1880
AccI	GTMKAC	1 cut(s)	1452
AccII	CGCG	2 cut(s)	241, 2448
AccIII	TCCGGA	1 cut(s)	1742
AclI	AACGTT	1 cut(s)	266
AclWI	GGATC	7 cut(s)	195, 245, 716, 794, 1081, 1158, 1734
AcoI	YGGCCR	2 cut(s)	999, 2353
AcsI	RAATTY	5 cut(s)	935, 1025, 1254, 1628, 1841
AcuI	CTGAAG	4 cut(s)	560, 794, 1285, 2253
AcvI	CACGTG	1 cut(s)	1715
AfaI	GTAC	2 cut(s)	117, 179
AfeI	AGCGCT	2 cut(s)	12, 555
AfiI	CCNNNNNNNGG	5 cut(s)	95, 174, 744, 1571, 2145
AgeI	ACCGGT	1 cut(s)	866
AjnI	CCWGG	3 cut(s)	308, 989, 1135
AleI	CACNNNNGTG	1 cut(s)	1652
Alw21I	GWGCWC	3 cut(s)	606, 964, 1184
Alw26I	GTCTC	4 cut(s)	49, 584, 1508, 1927
AlwI	GGATC	7 cut(s)	195, 245, 716, 794, 1081, 1158, 1734
Ama87I	CYCGRG	1 cut(s)	259
Aor13HI	TCCGGA	1 cut(s)	1742
Aor51HI	AGCGCT	2 cut(s)	12, 555
ApeKI	GCWGC	8 cut(s)	162, 1085, 1658, 1886, 1901, 2024, 2228, 2270
ApoI	RAATTY	5 cut(s)	935, 1025, 1254, 1628, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	464, 496
AseI	ATTAAT	1 cut(s)	1691
AsiGI	ACCGGT	1 cut(s)	866
Asp700I	GAANNNNTTC	1 cut(s)	1254
AspLEI	GCGC	3 cut(s)	13, 556, 2191
AspS9I	GGNCC	3 cut(s)	305, 853, 1198
AsuC2I	CCSGG	2 cut(s)	127, 857
AsuHPI	GGTGA	2 cut(s)	721, 2074
AsuII	TTCGAA	1 cut(s)	940
AvaI	CYCGRG	1 cut(s)	259
AvaII	GGWCC	2 cut(s)	305, 1198
AxyI	CCTNAGG	1 cut(s)	1978
BalI	TGGCCA	1 cut(s)	1001
BanII	GRGCYC	2 cut(s)	606, 862
BauI	CACGAG	1 cut(s)	1662
BbrPI	CACGTG	1 cut(s)	1715
BbsI	GAAGAC	2 cut(s)	585, 1731
Bbv12I	GWGCWC	3 cut(s)	606, 964, 1184
BbvCI	CCTCAGC	3 cut(s)	1223, 1863, 1959
BbvI	GCAGC	8 cut(s)	149, 1097, 1670, 1873, 1913, 2011, 2215, 2282
BccI	CCATC	5 cut(s)	206, 262, 1222, 1743, 2195
BceAI	ACGGC	5 cut(s)	649, 716, 742, 970, 2340
BciT130I	CCWGG	3 cut(s)	310, 991, 1137
BciVI	GTATCC	1 cut(s)	944
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	2 cut(s)	127, 857
BcoDI	GTCTC	4 cut(s)	49, 584, 1508, 1927
BfaI	CTAG	6 cut(s)	32, 245, 1259, 1437, 1446, 1797
BfmI	CTRYAG	3 cut(s)	1368, 1887, 1989
BfoI	RGCGCY	3 cut(s)	14, 557, 2192
BfuAI	ACCTGC	4 cut(s)	97, 997, 1601, 1880
BfuI	GTATCC	1 cut(s)	944
BglII	AGATCT	2 cut(s)	1372, 1996
BlpI	GCTNAGC	1 cut(s)	768
Bme1390I	CCNGG	5 cut(s)	127, 310, 857, 991, 1137
Bme18I	GGWCC	2 cut(s)	305, 1198
BmeT110I	CYCGRG	1 cut(s)	259
BmgT120I	GGNCC	3 cut(s)	305, 853, 1198
BmiI	GGNNCC	3 cut(s)	307, 441, 1199
BmrFI	CCNGG	5 cut(s)	127, 310, 857, 991, 1137
BmrI	ACTGGG	1 cut(s)	338
BmsI	GCATC	3 cut(s)	81, 1061, 2129
BmuI	ACTGGG	1 cut(s)	338
BpiI	GAAGAC	2 cut(s)	585, 1731
BplI	GAGNNNNNCTC	2 cut(s)	581, 613
BpmI	CTGGAG	2 cut(s)	455, 1791
Bpu10I	CCTNAGC	4 cut(s)	1223, 1863, 1959, 2019
Bpu1102I	GCTNAGC	1 cut(s)	768
Bpu14I	TTCGAA	1 cut(s)	940
BpuEI	CTTGAG	3 cut(s)	1074, 1198, 2161
BpuMI	CCSGG	2 cut(s)	127, 857
Bsa29I	ATCGAT	1 cut(s)	1738
BsaAI	YACGTR	1 cut(s)	1715
BsaI	GGTCTC	1 cut(s)	584
BsaJI	CCNNGG	5 cut(s)	308, 678, 990, 2356, 2446
BsaWI	WCCGGW	2 cut(s)	866, 1742
BsaXI	ACNNNNNCTCC	4 cut(s)	478, 508, 1764, 1794
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 174, 744, 1571, 2145
Bse118I	RCCGGY	3 cut(s)	395, 866, 1760
Bse1I	ACTGG	4 cut(s)	344, 952, 1674, 2260
Bse21I	CCTNAGG	1 cut(s)	1978
BseAI	TCCGGA	1 cut(s)	1742
BseBI	CCWGG	3 cut(s)	310, 991, 1137
BseCI	ATCGAT	1 cut(s)	1738
BseDI	CCNNGG	5 cut(s)	308, 678, 990, 2356, 2446
BseGI	GGATG	6 cut(s)	72, 217, 254, 418, 724, 1233
BseLI	CCNNNNNNNGG	5 cut(s)	95, 174, 744, 1571, 2145
BseMII	CTCAG	8 cut(s)	1214, 1503, 1524, 1533, 1877, 1950, 1992, 2051
BseNI	ACTGG	4 cut(s)	344, 952, 1674, 2260
BseXI	GCAGC	8 cut(s)	149, 1097, 1670, 1873, 1913, 2011, 2215, 2282
BsgI	GTGCAG	2 cut(s)	1920, 2232
Bsh1236I	CGCG	2 cut(s)	241, 2448
BshTI	ACCGGT	1 cut(s)	866
BshVI	ATCGAT	1 cut(s)	1738
BsiHKAI	GWGCWC	3 cut(s)	606, 964, 1184
BsiHKCI	CYCGRG	1 cut(s)	259
BsiSI	CCGG	7 cut(s)	126, 396, 856, 867, 1743, 1761, 2156
BslFI	GGGAC	1 cut(s)	1589
BslI	CCNNNNNNNGG	5 cut(s)	95, 174, 744, 1571, 2145
BsmAI	GTCTC	4 cut(s)	49, 584, 1508, 1927
BsmBI	CGTCTC	1 cut(s)	49
BsmFI	GGGAC	1 cut(s)	1589
BsmI	GAATGC	2 cut(s)	384, 1943
Bso31I	GGTCTC	1 cut(s)	584
BsoBI	CYCGRG	1 cut(s)	259
Bsp119I	TTCGAA	1 cut(s)	940
Bsp1286I	GDGCHC	4 cut(s)	606, 862, 964, 1184
Bsp13I	TCCGGA	1 cut(s)	1742
Bsp1407I	TGTACA	1 cut(s)	115
Bsp1720I	GCTNAGC	1 cut(s)	768
BspCNI	CTCAG	8 cut(s)	1215, 1504, 1525, 1534, 1876, 1951, 1991, 2052
BspDI	ATCGAT	1 cut(s)	1738
BspEI	TCCGGA	1 cut(s)	1742
BspFNI	CGCG	2 cut(s)	241, 2448
BspLI	GGNNCC	3 cut(s)	307, 441, 1199
BspMAI	CTGCAG	3 cut(s)	1372, 1891, 1993
BspMI	ACCTGC	4 cut(s)	97, 997, 1601, 1880
BspPI	GGATC	7 cut(s)	195, 245, 716, 794, 1081, 1158, 1734
BspQI	GCTCTTC	2 cut(s)	506, 647
BspT104I	TTCGAA	1 cut(s)	940
BspTNI	GGTCTC	1 cut(s)	584
BsrFI	RCCGGY	3 cut(s)	395, 866, 1760
BsrGI	TGTACA	1 cut(s)	115
BsrI	ACTGG	4 cut(s)	344, 952, 1674, 2260
BssAI	RCCGGY	3 cut(s)	395, 866, 1760
BssECI	CCNNGG	5 cut(s)	308, 678, 990, 2356, 2446
BssSI	CACGAG	1 cut(s)	1662
BssT1I	CCWWGG	1 cut(s)	678
Bst2BI	CACGAG	1 cut(s)	1662
Bst2UI	CCWGG	3 cut(s)	310, 991, 1137
Bst4CI	ACNGT	3 cut(s)	145, 970, 2004
Bst6I	CTCTTC	7 cut(s)	393, 506, 647, 1100, 1304, 2042, 2374
BstAPI	GCANNNNNTGC	1 cut(s)	2126
BstAUI	TGTACA	1 cut(s)	115
BstBAI	YACGTR	1 cut(s)	1715
BstBI	TTCGAA	1 cut(s)	940
BstC8I	GCNNGC	6 cut(s)	15, 611, 862, 1402, 1762, 2029
BstDSI	CCRYGG	2 cut(s)	2356, 2446
BstENI	CCTNNNNNAGG	3 cut(s)	93, 172, 2143
BstF5I	GGATG	6 cut(s)	72, 217, 254, 418, 724, 1233
BstFNI	CGCG	2 cut(s)	241, 2448
BstH2I	RGCGCY	3 cut(s)	14, 557, 2192
BstHHI	GCGC	3 cut(s)	13, 556, 2191
BstMAI	GTCTC	4 cut(s)	49, 584, 1508, 1927
BstNI	CCWGG	3 cut(s)	310, 991, 1137
BstNSI	RCATGY	1 cut(s)	1853
BstSCI	CCNGG	5 cut(s)	125, 308, 855, 989, 1135
BstSFI	CTRYAG	3 cut(s)	1368, 1887, 1989
BstUI	CGCG	2 cut(s)	241, 2448
BstV1I	GCAGC	8 cut(s)	149, 1097, 1670, 1873, 1913, 2011, 2215, 2282
BstV2I	GAAGAC	2 cut(s)	585, 1731
BstX2I	RGATCY	3 cut(s)	1073, 1372, 1996
BstXI	CCANNNNNNTGG	2 cut(s)	997, 1654
BstYI	RGATCY	3 cut(s)	1073, 1372, 1996
Bsu15I	ATCGAT	1 cut(s)	1738
Bsu36I	CCTNAGG	1 cut(s)	1978
BsuI	GTATCC	1 cut(s)	944
BsuTUI	ATCGAT	1 cut(s)	1738
BtgI	CCRYGG	2 cut(s)	2356, 2446
BtsCI	GGATG	6 cut(s)	72, 217, 254, 418, 724, 1233
BtsI	GCAGTG	2 cut(s)	1492, 2220
BtsIMutI	CAGTG	7 cut(s)	351, 1309, 1492, 1509, 1706, 2181, 2220
BveI	ACCTGC	4 cut(s)	97, 997, 1601, 1880
Cac8I	GCNNGC	6 cut(s)	15, 611, 862, 1402, 1762, 2029
CfoI	GCGC	3 cut(s)	13, 556, 2191
Cfr10I	RCCGGY	3 cut(s)	395, 866, 1760
Cfr13I	GGNCC	3 cut(s)	305, 853, 1198
Cfr42I	CCGCGG	1 cut(s)	2449
ClaI	ATCGAT	1 cut(s)	1738
CseI	GACGC	2 cut(s)	1393, 1755
CsiI	ACCWGGT	1 cut(s)	1135
Csp6I	GTAC	2 cut(s)	116, 178
CspAI	ACCGGT	1 cut(s)	866
CviAII	CATG	5 cut(s)	113, 814, 1553, 1850, 2078
CviQI	GTAC	2 cut(s)	116, 178
EaeI	YGGCCR	2 cut(s)	999, 2353
Eam1104I	CTCTTC	7 cut(s)	393, 506, 647, 1100, 1304, 2042, 2374
EarI	CTCTTC	7 cut(s)	393, 506, 647, 1100, 1304, 2042, 2374
EciI	GGCGGA	1 cut(s)	857
Ecl136II	GAGCTC	1 cut(s)	604
Eco130I	CCWWGG	1 cut(s)	678
Eco147I	AGGCCT	2 cut(s)	794, 1983
Eco24I	GRGCYC	2 cut(s)	606, 862
Eco31I	GGTCTC	1 cut(s)	584
Eco32I	GATATC	2 cut(s)	1468, 1675
Eco47I	GGWCC	2 cut(s)	305, 1198
Eco47III	AGCGCT	2 cut(s)	12, 555
Eco53kI	GAGCTC	1 cut(s)	604
Eco57I	CTGAAG	4 cut(s)	560, 794, 1285, 2253
Eco72I	CACGTG	1 cut(s)	1715
Eco81I	CCTNAGG	1 cut(s)	1978
Eco88I	CYCGRG	1 cut(s)	259
EcoICRI	GAGCTC	1 cut(s)	604
EcoNI	CCTNNNNNAGG	3 cut(s)	93, 172, 2143
EcoO109I	RGGNCCY	1 cut(s)	1198
EcoRII	CCWGG	3 cut(s)	308, 989, 1135
EcoRV	GATATC	2 cut(s)	1468, 1675
EcoT14I	CCWWGG	1 cut(s)	678
EcoT38I	GRGCYC	2 cut(s)	606, 862
ErhI	CCWWGG	1 cut(s)	678
Esp3I	CGTCTC	1 cut(s)	49
FaeI	CATG	5 cut(s)	116, 817, 1556, 1853, 2081
FaqI	GGGAC	1 cut(s)	1589
FatI	CATG	5 cut(s)	112, 813, 1552, 1849, 2077
FauI	CCCGC	1 cut(s)	1587
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	1452
FokI	GGATG	6 cut(s)	59, 224, 241, 425, 731, 1240
FriOI	GRGCYC	2 cut(s)	606, 862
FspBI	CTAG	6 cut(s)	32, 245, 1259, 1437, 1446, 1797
GlaI	GCGC	3 cut(s)	12, 555, 2190
GsuI	CTGGAG	2 cut(s)	455, 1791
HaeII	RGCGCY	3 cut(s)	14, 557, 2192
HapII	CCGG	7 cut(s)	126, 396, 856, 867, 1743, 1761, 2156
HgaI	GACGC	2 cut(s)	1393, 1755
HhaI	GCGC	3 cut(s)	13, 556, 2191
Hin1II	CATG	5 cut(s)	116, 817, 1556, 1853, 2081
Hin6I	GCGC	3 cut(s)	11, 554, 2189
HinP1I	GCGC	3 cut(s)	11, 554, 2189
HincII	GTYRAC	1 cut(s)	915
HindII	GTYRAC	1 cut(s)	915
HpaI	GTTAAC	1 cut(s)	915
HpaII	CCGG	7 cut(s)	126, 396, 856, 867, 1743, 1761, 2156
HphI	GGTGA	2 cut(s)	721, 2074
Hpy166II	GTNNAC	7 cut(s)	180, 801, 915, 1453, 1667, 1706, 2312
Hpy188III	TCNNGA	6 cut(s)	261, 1091, 1463, 1743, 1770, 1948
Hpy8I	GTNNAC	7 cut(s)	180, 801, 915, 1453, 1667, 1706, 2312
Hpy99I	CGWCG	2 cut(s)	575, 578
HpyCH4III	ACNGT	3 cut(s)	145, 970, 2004
HpyCH4IV	ACGT	8 cut(s)	105, 266, 417, 818, 1245, 1455, 1714, 1875
HpySE526I	ACGT	8 cut(s)	105, 266, 417, 818, 1245, 1455, 1714, 1875
Hsp92II	CATG	5 cut(s)	116, 817, 1556, 1853, 2081
HspAI	GCGC	3 cut(s)	11, 554, 2189
Kpn2I	TCCGGA	1 cut(s)	1742
KroI	GCCGGC	1 cut(s)	1760
KroNI	GCCGGC	1 cut(s)	1762
Ksp22I	TGATCA	1 cut(s)	3
KspAI	GTTAAC	1 cut(s)	915
KspI	CCGCGG	1 cut(s)	2449
LguI	GCTCTTC	2 cut(s)	506, 647
LmnI	GCTCC	9 cut(s)	33, 170, 241, 445, 585, 602, 1556, 1864, 1963
Lsp1109I	GCAGC	8 cut(s)	149, 1097, 1670, 1873, 1913, 2011, 2215, 2282
LweI	GCATC	3 cut(s)	81, 1061, 2129
MabI	ACCWGGT	1 cut(s)	1135
MaeI	CTAG	6 cut(s)	32, 245, 1259, 1437, 1446, 1797
MaeII	ACGT	8 cut(s)	105, 266, 417, 818, 1245, 1455, 1714, 1875
MaeIII	GTNAC	6 cut(s)	346, 733, 1276, 1600, 2052, 2080
MfeI	CAATTG	1 cut(s)	1869
MflI	RGATCY	3 cut(s)	1073, 1372, 1996
MhlI	GDGCHC	4 cut(s)	606, 862, 964, 1184
MlsI	TGGCCA	1 cut(s)	1001
MluNI	TGGCCA	1 cut(s)	1001
MlyI	GAGTC	6 cut(s)	485, 488, 539, 917, 2180, 2291
Mox20I	TGGCCA	1 cut(s)	1001
MroI	TCCGGA	1 cut(s)	1742
MroNI	GCCGGC	1 cut(s)	1760
MroXI	GAANNNNTTC	1 cut(s)	1254
MscI	TGGCCA	1 cut(s)	1001
MseI	TTAA	4 cut(s)	68, 914, 1350, 1691
MslI	CAYNNNNRTG	1 cut(s)	1652
Msp20I	TGGCCA	1 cut(s)	1001
MspA1I	CMGCKG	4 cut(s)	162, 1594, 2273, 2448
MspI	CCGG	7 cut(s)	126, 396, 856, 867, 1743, 1761, 2156
MspR9I	CCNGG	5 cut(s)	127, 310, 857, 991, 1137
MunI	CAATTG	1 cut(s)	1869
Mva1269I	GAATGC	2 cut(s)	384, 1943
MvaI	CCWGG	3 cut(s)	310, 991, 1137
MvnI	CGCG	2 cut(s)	241, 2448
NaeI	GCCGGC	1 cut(s)	1762
NciI	CCSGG	2 cut(s)	127, 857
NgoMIV	GCCGGC	1 cut(s)	1760
NlaIII	CATG	5 cut(s)	116, 817, 1556, 1853, 2081
NlaIV	GGNNCC	3 cut(s)	307, 441, 1199
NmeAIII	GCCGAG	2 cut(s)	585, 2331
NmuCI	GTSAC	4 cut(s)	346, 1600, 2052, 2080
NspI	RCATGY	1 cut(s)	1853
NspV	TTCGAA	1 cut(s)	940
OliI	CACNNNNGTG	1 cut(s)	1652
PaeR7I	CTCGAG	1 cut(s)	259
PaqCI	CACCTGC	1 cut(s)	997
PceI	AGGCCT	2 cut(s)	794, 1983
PciSI	GCTCTTC	2 cut(s)	506, 647
PctI	GAATGC	2 cut(s)	384, 1943
PdiI	GCCGGC	1 cut(s)	1762
PdmI	GAANNNNTTC	1 cut(s)	1254
PfeI	GAWTC	4 cut(s)	362, 638, 805, 1829
PinAI	ACCGGT	1 cut(s)	866
PleI	GAGTC	6 cut(s)	485, 487, 538, 916, 2179, 2291
PmaCI	CACGTG	1 cut(s)	1715
PmlI	CACGTG	1 cut(s)	1715
PpsI	GAGTC	6 cut(s)	485, 487, 538, 916, 2179, 2291
Ppu21I	YACGTR	1 cut(s)	1715
PpuMI	RGGWCCY	1 cut(s)	1198
PshBI	ATTAAT	1 cut(s)	1691
Psp124BI	GAGCTC	1 cut(s)	606
Psp1406I	AACGTT	1 cut(s)	266
Psp5II	RGGWCCY	1 cut(s)	1198
Psp6I	CCWGG	3 cut(s)	308, 989, 1135
PspCI	CACGTG	1 cut(s)	1715
PspGI	CCWGG	3 cut(s)	308, 989, 1135
PspN4I	GGNNCC	3 cut(s)	307, 441, 1199
PspPI	GGNCC	3 cut(s)	305, 853, 1198
PspPPI	RGGWCCY	1 cut(s)	1198
PsrI	GAACNNNNNNTAC	2 cut(s)	1269, 1301
PstI	CTGCAG	3 cut(s)	1372, 1891, 1993
PsuI	RGATCY	3 cut(s)	1073, 1372, 1996
PvuII	CAGCTG	2 cut(s)	162, 2273
RsaI	GTAC	2 cut(s)	117, 179
RsaNI	GTAC	2 cut(s)	116, 178
RseI	CAYNNNNRTG	1 cut(s)	1652
SacI	GAGCTC	1 cut(s)	606
SacII	CCGCGG	1 cut(s)	2449
SapI	GCTCTTC	2 cut(s)	506, 647
SaqAI	TTAA	4 cut(s)	68, 914, 1350, 1691
Sau96I	GGNCC	3 cut(s)	305, 853, 1198
SchI	GAGTC	6 cut(s)	485, 488, 539, 917, 2180, 2291
ScrFI	CCNGG	5 cut(s)	127, 310, 857, 991, 1137
SduI	GDGCHC	4 cut(s)	606, 862, 964, 1184
SexAI	ACCWGGT	1 cut(s)	1135
SfaNI	GCATC	3 cut(s)	81, 1061, 2129
SfcI	CTRYAG	3 cut(s)	1368, 1887, 1989
Sfr274I	CTCGAG	1 cut(s)	259
Sfr303I	CCGCGG	1 cut(s)	2449
SfuI	TTCGAA	1 cut(s)	940
SgrBI	CCGCGG	1 cut(s)	2449
SinI	GGWCC	2 cut(s)	305, 1198
SlaI	CTCGAG	1 cut(s)	259
SmiMI	CAYNNNNRTG	1 cut(s)	1652
SmlI	CTYRAG	4 cut(s)	259, 1089, 1177, 2140
SmoI	CTYRAG	4 cut(s)	259, 1089, 1177, 2140
SseBI	AGGCCT	2 cut(s)	794, 1983
SspI	AATATT	1 cut(s)	1333
SspMI	CTAG	6 cut(s)	32, 245, 1259, 1437, 1446, 1797
SstI	GAGCTC	1 cut(s)	606
StuI	AGGCCT	2 cut(s)	794, 1983
StyD4I	CCNGG	5 cut(s)	125, 308, 855, 989, 1135
StyI	CCWWGG	1 cut(s)	678
TaaI	ACNGT	3 cut(s)	145, 970, 2004
TaiI	ACGT	8 cut(s)	108, 269, 420, 821, 1248, 1458, 1717, 1878
TatI	WGTACW	1 cut(s)	115
TauI	GCSGC	4 cut(s)	757, 2433, 2448, 2451
TfiI	GAWTC	4 cut(s)	362, 638, 805, 1829
Tru1I	TTAA	4 cut(s)	68, 914, 1350, 1691
Tru9I	TTAA	4 cut(s)	68, 914, 1350, 1691
TscAI	CASTG	7 cut(s)	351, 1309, 1492, 1516, 1706, 2181, 2220
TseFI	GTSAC	4 cut(s)	346, 1600, 2052, 2080
TseI	GCWGC	8 cut(s)	162, 1085, 1658, 1886, 1901, 2024, 2228, 2270
Tsp45I	GTSAC	4 cut(s)	346, 1600, 2052, 2080
TspDTI	ATGAA	6 cut(s)	327, 476, 1221, 1230, 1401, 1409
TspGWI	ACGGA	1 cut(s)	299
TspRI	CASTG	7 cut(s)	351, 1309, 1492, 1516, 1706, 2181, 2220
VpaK11BI	GGWCC	2 cut(s)	305, 1198
VspI	ATTAAT	1 cut(s)	1691
XagI	CCTNNNNNAGG	3 cut(s)	93, 172, 2143
XapI	RAATTY	5 cut(s)	935, 1025, 1254, 1628, 1841
XceI	RCATGY	1 cut(s)	1853
XcmI	CCANNNNNNNNNTGG	1 cut(s)	994
XhoI	CTCGAG	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	1452
XmnI	GAANNNNTTC	1 cut(s)	1254
XspI	CTAG	6 cut(s)	32, 245, 1259, 1437, 1446, 1797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.