Translation initiation factor eIF3 subunit 135
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G28080 |
| fragaria_vesca | FvH4_3g24640 FvH4_3g24640 FvH4_3g24640 |
| malus_domestica | MD16G1258600.v1.1 |
| prunus_persica | Prupe.1G101800_v2.0.a1 |
| pyrus_communis | pycom16g22600 |
| rosa_chinensis | RchiOBHm_Chr4g0405441 |
| rosa_laevigata | RLG00000008842 |
| rosa_multiflora | Rmu_co8255623.1_g000001 Rmu_sc0000575.1_g000017 Rmu_sc0000575.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00349900 |
| rosa_rugosa | Rorug04G0060200 |
| rosa_samantha | Rh4AG131900 Rh4BG126800 Rh4CG139300 Rh4DG125900 |
| rosa_wichuraiana | Rw4G010680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 368, 1122 |
| Acc36I | ACCTGC | 1 cut(s) | 4042 |
| Acc65I | GGTACC | 1 cut(s) | 3234 |
| AccB1I | GGYRCC | 1 cut(s) | 3234 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2162, 2278, 4829, 4925 |
| AccI | GTMKAC | 3 cut(s) | 383, 1116, 3778 |
| AccII | CGCG | 2 cut(s) | 2026, 2223 |
| AciI | CCGC | 9 cut(s) | 479, 531, 554, 935, 1944, 2026, 3428, 4280, 4890 |
| AclI | AACGTT | 1 cut(s) | 5511 |
| AclWI | GGATC | 2 cut(s) | 158, 3417 |
| AcoI | YGGCCR | 3 cut(s) | 565, 800, 5200 |
| AcsI | RAATTY | 7 cut(s) | 854, 1618, 1933, 3381, 3676, 3706, 4308 |
| AcuI | CTGAAG | 9 cut(s) | 1527, 1556, 1743, 3753, 4060, 4487, 4563, 5424, 5547 |
| AcvI | CACGTG | 1 cut(s) | 4787 |
| AcyI | GRCGYC | 2 cut(s) | 365, 1119 |
| AdeI | CACNNNGTG | 2 cut(s) | 226, 1397 |
| AflII | CTTAAG | 1 cut(s) | 2057 |
| AflIII | ACRYGT | 3 cut(s) | 191, 2221, 3017 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2590 |
| AjnI | CCWGG | 8 cut(s) | 2214, 3628, 4255, 4323, 4700, 4948, 5197, 5557 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 5196, 5228 |
| AleI | CACNNNNGTG | 1 cut(s) | 5136 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4741, 4773 |
| Alw21I | GWGCWC | 4 cut(s) | 474, 849, 1607, 5145 |
| AlwI | GGATC | 2 cut(s) | 158, 3417 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 2045, 3572, 3653, 4166, 4658, 5558 |
| Ama87I | CYCGRG | 1 cut(s) | 3398 |
| ApoI | RAATTY | 7 cut(s) | 854, 1618, 1933, 3381, 3676, 3706, 4308 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 481, 513, 3386, 3418, 4127, 4159 |
| AseI | ATTAAT | 1 cut(s) | 2880 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 836 |
| Asp718I | GGTACC | 1 cut(s) | 3234 |
| AspA2I | CCTAGG | 2 cut(s) | 3752, 4681 |
| AspLEI | GCGC | 2 cut(s) | 2998, 3124 |
| AsuC2I | CCSGG | 2 cut(s) | 402, 5149 |
| AsuII | TTCGAA | 1 cut(s) | 334 |
| AsuNHI | GCTAGC | 1 cut(s) | 3299 |
| AvaI | CYCGRG | 1 cut(s) | 3398 |
| AvrII | CCTAGG | 2 cut(s) | 3752, 4681 |
| AxyI | CCTNAGG | 1 cut(s) | 1479 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 5298, 5331, 5556, 5589 |
| BalI | TGGCCA | 1 cut(s) | 5202 |
| BanI | GGYRCC | 1 cut(s) | 3234 |
| BauI | CACGAG | 1 cut(s) | 221 |
| BbrPI | CACGTG | 1 cut(s) | 4787 |
| BbsI | GAAGAC | 4 cut(s) | 343, 494, 2798, 5244 |
| Bbv12I | GWGCWC | 4 cut(s) | 474, 849, 1607, 5145 |
| BbvCI | CCTCAGC | 2 cut(s) | 1449, 5649 |
| BceAI | ACGGC | 8 cut(s) | 305, 618, 787, 3010, 3057, 3136, 3183, 4380 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 458, 492, 2004, 2038 |
| BciT130I | CCWGG | 8 cut(s) | 2216, 3630, 4257, 4325, 4702, 4950, 5199, 5559 |
| BciVI | GTATCC | 3 cut(s) | 558, 2279, 2422 |
| BclI | TGATCA | 3 cut(s) | 2902, 3280, 4171 |
| BcnI | CCSGG | 2 cut(s) | 402, 5149 |
| BfmI | CTRYAG | 7 cut(s) | 711, 2814, 3386, 4119, 4446, 4884, 5480 |
| BfrI | CTTAAG | 1 cut(s) | 2057 |
| BfuAI | ACCTGC | 1 cut(s) | 4042 |
| BfuI | GTATCC | 3 cut(s) | 558, 2279, 2422 |
| BglII | AGATCT | 4 cut(s) | 626, 1609, 3544, 5093 |
| BlnI | CCTAGG | 2 cut(s) | 3752, 4681 |
| BmcAI | AGTACT | 2 cut(s) | 1653, 2820 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2590 |
| BmeT110I | CYCGRG | 1 cut(s) | 3398 |
| BmrI | ACTGGG | 3 cut(s) | 2841, 3906, 3946 |
| BmtI | GCTAGC | 1 cut(s) | 3303 |
| BmuI | ACTGGG | 3 cut(s) | 2841, 3906, 3946 |
| BpiI | GAAGAC | 4 cut(s) | 343, 494, 2798, 5244 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3329, 3361, 3635, 3667 |
| BpmI | CTGGAG | 5 cut(s) | 2735, 2814, 3502, 4026, 5325 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1449, 4083, 5649 |
| Bpu14I | TTCGAA | 1 cut(s) | 334 |
| BpuEI | CTTGAG | 5 cut(s) | 665, 2576, 3236, 3461, 3803 |
| BpuMI | CCSGG | 2 cut(s) | 402, 5149 |
| BsaAI | YACGTR | 3 cut(s) | 184, 4787, 5114 |
| BsaBI | GATNNNNATC | 2 cut(s) | 512, 2841 |
| BsaHI | GRCGYC | 2 cut(s) | 365, 1119 |
| BsaI | GGTCTC | 3 cut(s) | 2054, 4958, 5334 |
| BsaWI | WCCGGW | 7 cut(s) | 424, 449, 904, 4112, 4936, 5290, 5311 |
| Bse118I | RCCGGY | 4 cut(s) | 518, 798, 1804, 3870 |
| Bse21I | CCTNAGG | 1 cut(s) | 1479 |
| Bse3DI | GCAATG | 5 cut(s) | 549, 1050, 2489, 3072, 3198 |
| Bse8I | GATNNNNATC | 2 cut(s) | 512, 2841 |
| BseBI | CCWGG | 8 cut(s) | 2216, 3630, 4257, 4325, 4702, 4950, 5199, 5559 |
| BseJI | GATNNNNATC | 2 cut(s) | 512, 2841 |
| BseMI | GCAATG | 5 cut(s) | 549, 1050, 2489, 3072, 3198 |
| BseRI | GAGGAG | 5 cut(s) | 594, 674, 1079, 1970, 4029 |
| BseX3I | CGGCCG | 1 cut(s) | 800 |
| BseYI | CCCAGC | 1 cut(s) | 4159 |
| BsgI | GTGCAG | 5 cut(s) | 343, 2094, 3465, 4599, 5430 |
| Bsh1236I | CGCG | 2 cut(s) | 2026, 2223 |
| Bsh1285I | CGRYCG | 3 cut(s) | 434, 516, 803 |
| BshNI | GGYRCC | 1 cut(s) | 3234 |
| BsiEI | CGRYCG | 3 cut(s) | 434, 516, 803 |
| BsiHKAI | GWGCWC | 4 cut(s) | 474, 849, 1607, 5145 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3398 |
| BslFI | GGGAC | 5 cut(s) | 884, 2232, 2612, 4273, 5260 |
| BsmBI | CGTCTC | 6 cut(s) | 984, 1126, 2598, 3033, 3159, 4859 |
| BsmFI | GGGAC | 5 cut(s) | 884, 2232, 2612, 4273, 5260 |
| BsmI | GAATGC | 2 cut(s) | 1314, 1551 |
| Bso31I | GGTCTC | 3 cut(s) | 2054, 4958, 5334 |
| BsoBI | CYCGRG | 1 cut(s) | 3398 |
| Bsp119I | TTCGAA | 1 cut(s) | 334 |
| Bsp1286I | GDGCHC | 4 cut(s) | 474, 849, 1607, 5145 |
| Bsp1407I | TGTACA | 3 cut(s) | 2254, 2634, 4303 |
| Bsp19I | CCATGG | 1 cut(s) | 1013 |
| BspACI | CCGC | 9 cut(s) | 479, 531, 554, 935, 1944, 2026, 3428, 4280, 4890 |
| BspFNI | CGCG | 2 cut(s) | 2026, 2223 |
| BspHI | TCATGA | 3 cut(s) | 828, 1207, 1378 |
| BspMAI | CTGCAG | 4 cut(s) | 3390, 4123, 4888, 5484 |
| BspMI | ACCTGC | 1 cut(s) | 4042 |
| BspOI | GCTAGC | 1 cut(s) | 3303 |
| BspPI | GGATC | 2 cut(s) | 158, 3417 |
| BspQI | GCTCTTC | 1 cut(s) | 306 |
| BspT104I | TTCGAA | 1 cut(s) | 334 |
| BspT107I | GGYRCC | 1 cut(s) | 3234 |
| BspTI | CTTAAG | 1 cut(s) | 2057 |
| BspTNI | GGTCTC | 3 cut(s) | 2054, 4958, 5334 |
| BsrDI | GCAATG | 5 cut(s) | 549, 1050, 2489, 3072, 3198 |
| BsrFI | RCCGGY | 4 cut(s) | 518, 798, 1804, 3870 |
| BsrGI | TGTACA | 3 cut(s) | 2254, 2634, 4303 |
| BssAI | RCCGGY | 4 cut(s) | 518, 798, 1804, 3870 |
| BssNI | GRCGYC | 2 cut(s) | 365, 1119 |
| BssSI | CACGAG | 1 cut(s) | 221 |
| BssT1I | CCWWGG | 8 cut(s) | 39, 1013, 2567, 2697, 3752, 4491, 4681, 5207 |
| Bst2BI | CACGAG | 1 cut(s) | 221 |
| Bst2UI | CCWGG | 8 cut(s) | 2216, 3630, 4257, 4325, 4702, 4950, 5199, 5559 |
| Bst6I | CTCTTC | 5 cut(s) | 57, 291, 306, 982, 2462 |
| BstACI | GRCGYC | 2 cut(s) | 365, 1119 |
| BstAFI | CTTAAG | 1 cut(s) | 2057 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 821, 1259, 1744, 3385 |
| BstAUI | TGTACA | 3 cut(s) | 2254, 2634, 4303 |
| BstBAI | YACGTR | 3 cut(s) | 184, 4787, 5114 |
| BstBI | TTCGAA | 1 cut(s) | 334 |
| BstDSI | CCRYGG | 2 cut(s) | 321, 1013 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1509, 1642 |
| BstFNI | CGCG | 2 cut(s) | 2026, 2223 |
| BstHHI | GCGC | 2 cut(s) | 2998, 3124 |
| BstMCI | CGRYCG | 3 cut(s) | 434, 516, 803 |
| BstNI | CCWGG | 8 cut(s) | 2216, 3630, 4257, 4325, 4702, 4950, 5199, 5559 |
| BstNSI | RCATGY | 8 cut(s) | 195, 1731, 2367, 2645, 2652, 3021, 4511, 5183 |
| BstSFI | CTRYAG | 7 cut(s) | 711, 2814, 3386, 4119, 4446, 4884, 5480 |
| BstUI | CGCG | 2 cut(s) | 2026, 2223 |
| BstV2I | GAAGAC | 4 cut(s) | 343, 494, 2798, 5244 |
| BstX2I | RGATCY | 6 cut(s) | 150, 626, 1609, 3409, 3544, 5093 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2549, 3463 |
| BstYI | RGATCY | 6 cut(s) | 150, 626, 1609, 3409, 3544, 5093 |
| BstZI | CGGCCG | 1 cut(s) | 800 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1479 |
| BsuI | GTATCC | 3 cut(s) | 558, 2279, 2422 |
| BtgI | CCRYGG | 2 cut(s) | 321, 1013 |
| BtsI | GCAGTG | 3 cut(s) | 4251, 4281, 4563 |
| BveI | ACCTGC | 1 cut(s) | 4042 |
| CaiI | CAGNNNCTG | 6 cut(s) | 2045, 3572, 3653, 4166, 4658, 5558 |
| CciI | TCATGA | 3 cut(s) | 828, 1207, 1378 |
| CfoI | GCGC | 2 cut(s) | 2998, 3124 |
| Cfr10I | RCCGGY | 4 cut(s) | 518, 798, 1804, 3870 |
| CseI | GACGC | 1 cut(s) | 2229 |
| CsiI | ACCWGGT | 1 cut(s) | 3628 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2106, 2141 |
| DraIII | CACNNNGTG | 2 cut(s) | 226, 1397 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2590 |
| EaeI | YGGCCR | 3 cut(s) | 565, 800, 5200 |
| EagI | CGGCCG | 1 cut(s) | 800 |
| Eam1104I | CTCTTC | 5 cut(s) | 57, 291, 306, 982, 2462 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2590 |
| EarI | CTCTTC | 5 cut(s) | 57, 291, 306, 982, 2462 |
| EciI | GGCGGA | 2 cut(s) | 543, 4295 |
| EclXI | CGGCCG | 1 cut(s) | 800 |
| Eco130I | CCWWGG | 8 cut(s) | 39, 1013, 2567, 2697, 3752, 4491, 4681, 5207 |
| Eco147I | AGGCCT | 1 cut(s) | 1091 |
| Eco31I | GGTCTC | 3 cut(s) | 2054, 4958, 5334 |
| Eco32I | GATATC | 3 cut(s) | 1867, 3965, 5288 |
| Eco52I | CGGCCG | 1 cut(s) | 800 |
| Eco57I | CTGAAG | 9 cut(s) | 1527, 1556, 1743, 3753, 4060, 4487, 4563, 5424, 5547 |
| Eco72I | CACGTG | 1 cut(s) | 4787 |
| Eco81I | CCTNAGG | 1 cut(s) | 1479 |
| Eco88I | CYCGRG | 1 cut(s) | 3398 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1509, 1642 |
| EcoO109I | RGGNCCY | 4 cut(s) | 233, 664, 1635, 1816 |
| EcoRI | GAATTC | 1 cut(s) | 1933 |
| EcoRII | CCWGG | 8 cut(s) | 2214, 3628, 4255, 4323, 4700, 4948, 5197, 5557 |
| EcoRV | GATATC | 3 cut(s) | 1867, 3965, 5288 |
| EcoT14I | CCWWGG | 8 cut(s) | 39, 1013, 2567, 2697, 3752, 4491, 4681, 5207 |
| EcoT22I | ATGCAT | 2 cut(s) | 2017, 2190 |
| ErhI | CCWWGG | 8 cut(s) | 39, 1013, 2567, 2697, 3752, 4491, 4681, 5207 |
| Esp3I | CGTCTC | 6 cut(s) | 984, 1126, 2598, 3033, 3159, 4859 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2681, 2713, 4475, 4507, 5044, 5076 |
| FaqI | GGGAC | 5 cut(s) | 884, 2232, 2612, 4273, 5260 |
| FauI | CCCGC | 1 cut(s) | 942 |
| FbaI | TGATCA | 3 cut(s) | 2902, 3280, 4171 |
| FblI | GTMKAC | 3 cut(s) | 383, 1116, 3778 |
| GlaI | GCGC | 2 cut(s) | 2997, 3123 |
| GsaI | CCCAGC | 1 cut(s) | 4163 |
| GsuI | CTGGAG | 5 cut(s) | 2735, 2814, 3502, 4026, 5325 |
| HgaI | GACGC | 1 cut(s) | 2229 |
| HhaI | GCGC | 2 cut(s) | 2998, 3124 |
| Hin1I | GRCGYC | 2 cut(s) | 365, 1119 |
| Hin6I | GCGC | 2 cut(s) | 2996, 3122 |
| HinP1I | GCGC | 2 cut(s) | 2996, 3122 |
| HincII | GTYRAC | 4 cut(s) | 346, 1117, 1534, 4212 |
| HindII | GTYRAC | 4 cut(s) | 346, 1117, 1534, 4212 |
| HindIII | AAGCTT | 2 cut(s) | 3459, 4072 |
| HpaI | GTTAAC | 1 cut(s) | 1534 |
| Hpy99I | CGWCG | 8 cut(s) | 296, 356, 367, 370, 382, 470, 709, 1121 |
| Hsp92I | GRCGYC | 2 cut(s) | 365, 1119 |
| HspAI | GCGC | 2 cut(s) | 2996, 3122 |
| KpnI | GGTACC | 1 cut(s) | 3238 |
| KroI | GCCGGC | 2 cut(s) | 518, 798 |
| KroNI | GCCGGC | 2 cut(s) | 520, 800 |
| Ksp22I | TGATCA | 3 cut(s) | 2902, 3280, 4171 |
| KspAI | GTTAAC | 1 cut(s) | 1534 |
| LguI | GCTCTTC | 1 cut(s) | 306 |
| MabI | ACCWGGT | 1 cut(s) | 3628 |
| MfeI | CAATTG | 3 cut(s) | 4263, 5367, 5466 |
| MflI | RGATCY | 6 cut(s) | 150, 626, 1609, 3409, 3544, 5093 |
| MhlI | GDGCHC | 4 cut(s) | 474, 849, 1607, 5145 |
| MlsI | TGGCCA | 1 cut(s) | 5202 |
| MluI | ACGCGT | 1 cut(s) | 2221 |
| MluNI | TGGCCA | 1 cut(s) | 5202 |
| MlyI | GAGTC | 7 cut(s) | 107, 455, 511, 545, 3461, 4496, 5366 |
| MmeI | TCCRAC | 3 cut(s) | 4498, 5357, 5371 |
| Mox20I | TGGCCA | 1 cut(s) | 5202 |
| Mph1103I | ATGCAT | 2 cut(s) | 2017, 2190 |
| MreI | CGCCGGCG | 1 cut(s) | 518 |
| MroNI | GCCGGC | 2 cut(s) | 518, 798 |
| MroXI | GAANNNNTTC | 1 cut(s) | 836 |
| MscI | TGGCCA | 1 cut(s) | 5202 |
| MslI | CAYNNNNRTG | 3 cut(s) | 3534, 4512, 5136 |
| Msp20I | TGGCCA | 1 cut(s) | 5202 |
| MspA1I | CMGCKG | 3 cut(s) | 1358, 4655, 5186 |
| MspCI | CTTAAG | 1 cut(s) | 2057 |
| MunI | CAATTG | 3 cut(s) | 4263, 5367, 5466 |
| Mva1269I | GAATGC | 2 cut(s) | 1314, 1551 |
| MvaI | CCWGG | 8 cut(s) | 2216, 3630, 4257, 4325, 4702, 4950, 5199, 5559 |
| MvnI | CGCG | 2 cut(s) | 2026, 2223 |
| NaeI | GCCGGC | 2 cut(s) | 520, 800 |
| NciI | CCSGG | 2 cut(s) | 402, 5149 |
| NcoI | CCATGG | 1 cut(s) | 1013 |
| NgoMIV | GCCGGC | 2 cut(s) | 518, 798 |
| NheI | GCTAGC | 1 cut(s) | 3299 |
| NmeAIII | GCCGAG | 2 cut(s) | 543, 582 |
| NsiI | ATGCAT | 2 cut(s) | 2017, 2190 |
| NspI | RCATGY | 8 cut(s) | 195, 1731, 2367, 2645, 2652, 3021, 4511, 5183 |
| NspV | TTCGAA | 1 cut(s) | 334 |
| OliI | CACNNNNGTG | 1 cut(s) | 5136 |
| PaeI | GCATGC | 1 cut(s) | 4511 |
| PagI | TCATGA | 3 cut(s) | 828, 1207, 1378 |
| PasI | CCCWGGG | 1 cut(s) | 2215 |
| PceI | AGGCCT | 1 cut(s) | 1091 |
| PciI | ACATGT | 2 cut(s) | 191, 3017 |
| PciSI | GCTCTTC | 1 cut(s) | 306 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 374, 465, 999, 5110 |
| PctI | GAATGC | 2 cut(s) | 1314, 1551 |
| PdiI | GCCGGC | 2 cut(s) | 520, 800 |
| PdmI | GAANNNNTTC | 1 cut(s) | 836 |
| PfeI | GAWTC | 9 cut(s) | 508, 1187, 2036, 2681, 3770, 4472, 4538, 4715, 5317 |
| PflFI | GACNNNGTC | 1 cut(s) | 350 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2162, 2278, 4829, 4925 |
| Ple19I | CGATCG | 1 cut(s) | 516 |
| PleI | GAGTC | 7 cut(s) | 107, 454, 510, 544, 3460, 4495, 5365 |
| PmaCI | CACGTG | 1 cut(s) | 4787 |
| PmlI | CACGTG | 1 cut(s) | 4787 |
| PpsI | GAGTC | 7 cut(s) | 107, 454, 510, 544, 3460, 4495, 5365 |
| Ppu21I | YACGTR | 3 cut(s) | 184, 4787, 5114 |
| PpuMI | RGGWCCY | 3 cut(s) | 233, 664, 1635 |
| PscI | ACATGT | 2 cut(s) | 191, 3017 |
| PshBI | ATTAAT | 1 cut(s) | 2880 |
| Psp1406I | AACGTT | 1 cut(s) | 5511 |
| Psp5II | RGGWCCY | 3 cut(s) | 233, 664, 1635 |
| Psp6I | CCWGG | 8 cut(s) | 2214, 3628, 4255, 4323, 4700, 4948, 5197, 5557 |
| PspCI | CACGTG | 1 cut(s) | 4787 |
| PspFI | CCCAGC | 1 cut(s) | 4159 |
| PspGI | CCWGG | 8 cut(s) | 2214, 3628, 4255, 4323, 4700, 4948, 5197, 5557 |
| PspPPI | RGGWCCY | 3 cut(s) | 233, 664, 1635 |
| PstI | CTGCAG | 4 cut(s) | 3390, 4123, 4888, 5484 |
| PstNI | CAGNNNCTG | 6 cut(s) | 2045, 3572, 3653, 4166, 4658, 5558 |
| PsuI | RGATCY | 6 cut(s) | 150, 626, 1609, 3409, 3544, 5093 |
| PsyI | GACNNNGTC | 1 cut(s) | 350 |
| PvuI | CGATCG | 1 cut(s) | 516 |
| PvuII | CAGCTG | 3 cut(s) | 1358, 4655, 5186 |
| RseI | CAYNNNNRTG | 3 cut(s) | 3534, 4512, 5136 |
| SalI | GTCGAC | 1 cut(s) | 1115 |
| SapI | GCTCTTC | 1 cut(s) | 306 |
| ScaI | AGTACT | 2 cut(s) | 1653, 2820 |
| SchI | GAGTC | 7 cut(s) | 107, 455, 511, 545, 3461, 4496, 5366 |
| SduI | GDGCHC | 4 cut(s) | 474, 849, 1607, 5145 |
| SexAI | ACCWGGT | 1 cut(s) | 3628 |
| SfcI | CTRYAG | 7 cut(s) | 711, 2814, 3386, 4119, 4446, 4884, 5480 |
| SfuI | TTCGAA | 1 cut(s) | 334 |
| SgrAI | CRCCGGYG | 1 cut(s) | 518 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 3534, 4512, 5136 |
| SmlI | CTYRAG | 6 cut(s) | 644, 2057, 2555, 3251, 3440, 3782 |
| SmoI | CTYRAG | 6 cut(s) | 644, 2057, 2555, 3251, 3440, 3782 |
| SphI | GCATGC | 1 cut(s) | 4511 |
| SseBI | AGGCCT | 1 cut(s) | 1091 |
| SsiI | CCGC | 9 cut(s) | 479, 531, 554, 935, 1944, 2026, 3428, 4280, 4890 |
| SspI | AATATT | 3 cut(s) | 2374, 3798, 4993 |
| StuI | AGGCCT | 1 cut(s) | 1091 |
| StyI | CCWWGG | 8 cut(s) | 39, 1013, 2567, 2697, 3752, 4491, 4681, 5207 |
| TaqII | GACCGA | 1 cut(s) | 420 |
| TatI | WGTACW | 7 cut(s) | 1651, 2254, 2634, 2818, 4303, 4522, 5440 |
| TauI | GCSGC | 4 cut(s) | 534, 2029, 3431, 4892 |
| TfiI | GAWTC | 9 cut(s) | 508, 1187, 2036, 2681, 3770, 4472, 4538, 4715, 5317 |
| TspGWI | ACGGA | 5 cut(s) | 158, 323, 627, 3499, 5012 |
| Tth111I | GACNNNGTC | 1 cut(s) | 350 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2162, 2278, 4829, 4925 |
| Vha464I | CTTAAG | 1 cut(s) | 2057 |
| VspI | ATTAAT | 1 cut(s) | 2880 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1509, 1642 |
| XapI | RAATTY | 7 cut(s) | 854, 1618, 1933, 3381, 3676, 3706, 4308 |
| XbaI | TCTAGA | 1 cut(s) | 946 |
| XceI | RCATGY | 8 cut(s) | 195, 1731, 2367, 2645, 2652, 3021, 4511, 5183 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2695, 5619 |
| XmaJI | CCTAGG | 2 cut(s) | 3752, 4681 |
| XmiI | GTMKAC | 3 cut(s) | 383, 1116, 3778 |
| XmnI | GAANNNNTTC | 1 cut(s) | 836 |
| ZraI | GACGTC | 2 cut(s) | 366, 1120 |
| ZrmI | AGTACT | 2 cut(s) | 1653, 2820 |
| Zsp2I | ATGCAT | 2 cut(s) | 2017, 2190 |