Rmu_sc0000837.1_g000081

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000837.1
OG0004522
Physical Location & Seq
Reverse (-)
398163 .. 400854
2692 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1146 bp
atgatattttctaatgattttgctaagttcaacaaaggatatgtgaaatcaatggcagattgtattggagataaaagcttgctctgtgtaccacatgagaaccataaaagaataaggcgcttattatcagatcctttctccatgaattctttatcttcgttcattgagaaattcgatagaatgctgtgtcagaagctgaagaaactagaacaaggtgggaaaagcttttcggtgcttgacttcagtatgaggatgacatttgaagcgatgtgctgcatgctaatgagtgtcatggatgagcccttgctaaggcagcttgagaaagactgcactgcagtctcggatggaatcttatctgttcctgtcatgattccaggcactagatattacaaaggcatcaaggcacgcagacgtctcatggaaacctttaaagacatgattgccagaagaaggagtgggaaggagttgccagaaccagaagatttcctacagtccatgttgcgaagagactcataccctcccaatgaaaagctgcaagactcagaaatcatggacaacctaatgacacttataattgcagggcagacgaccacttcagctgcaatgatgtggagtgtcaagtttctggatgagaaccaacaagtccaaaacattcttagggaggaacaattgtctatagccacatccaagcccgaaggagcatcaattaccctcgaagatattaataatatgtcctactgttggaaggttgttaaagaaacagtaaggatgtcaactgtggttatgtggtatcctcgagttgcactcagtgactgtactatagaaggttttgagataaagaaagggtggcatgtgaacattgacgcgacatgcatacacaacgacccagatttgtacccagacccttccaaattcaacccttctagatttgatgaaatacaaaagccatatagtttcataccttttgggtcaggacccaggacatgcttgggaatcaatatggccaagatgaccatgatggtctttcttcaccgtctcactactgcatataggtggacagtcgataatcttgataccagtctagaaaagaaggcccatattcctagactaagaagtggttgtcccattaccttgacggccttgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

381

Amino Acids

43.77

Weight (kDa)

8.54

Isoelectric Point (pI)

54.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 17 - 359 9e-64 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 572
AatII GACGTC 1 cut(s) 415
AccII CGCG 1 cut(s) 866
AclWI GGATC 1 cut(s) 125
AcoI YGGCCR 1 cut(s) 1002
AcsI RAATTY 3 cut(s) 145, 170, 911
AcuI CTGAAG 3 cut(s) 218, 226, 579
AcyI GRCGYC 1 cut(s) 412
AdeI CACNNNGTG 1 cut(s) 809
AfaI GTAC 3 cut(s) 90, 817, 896
AfiI CCNNNNNNNGG 3 cut(s) 309, 450, 741
AgsI TTSAA 3 cut(s) 31, 263, 916
AjnI CCWGG 2 cut(s) 373, 977
AluBI AGCT 6 cut(s) 78, 196, 225, 316, 532, 599
AluI AGCT 6 cut(s) 78, 196, 225, 316, 532, 599
Alw26I GTCTC 4 cut(s) 343, 419, 501, 1040
AlwI GGATC 1 cut(s) 125
AlwNI CAGNNNCTG 2 cut(s) 196, 813
Ama87I CYCGRG 1 cut(s) 795
AoxI GGCC 3 cut(s) 1002, 1092, 1137
ApeKI GCWGC 4 cut(s) 273, 313, 532, 599
ApoI RAATTY 3 cut(s) 145, 170, 911
AseI ATTAAT 1 cut(s) 723
AspLEI GCGC 1 cut(s) 120
AspS9I GGNCC 2 cut(s) 974, 1093
AsuHPI GGTGA 1 cut(s) 1022
AvaI CYCGRG 1 cut(s) 795
AvaII GGWCC 1 cut(s) 974
BalI TGGCCA 1 cut(s) 1004
BanII GRGCYC 1 cut(s) 303
BarI GAAGNNNNNNTAC 2 cut(s) 471, 503
BbvI GCAGC 4 cut(s) 260, 325, 519, 586
BccI CCATC 2 cut(s) 338, 1012
BciT130I CCWGG 2 cut(s) 375, 979
BciVI GTATCC 1 cut(s) 801
BcoDI GTCTC 4 cut(s) 343, 419, 501, 1040
BfaI CTAG 5 cut(s) 206, 381, 924, 1082, 1104
BfmI CTRYAG 4 cut(s) 333, 488, 675, 819
BfoI RGCGCY 1 cut(s) 121
BfuI GTATCC 1 cut(s) 801
BisI GCNGC 4 cut(s) 274, 314, 533, 600
BlsI GCNGC 4 cut(s) 275, 315, 534, 601
Bme1390I CCNGG 2 cut(s) 375, 979
Bme18I GGWCC 1 cut(s) 974
BmeT110I CYCGRG 1 cut(s) 795
BmgT120I GGNCC 2 cut(s) 974, 1093
BmiI GGNNCC 1 cut(s) 976
BmrFI CCNGG 2 cut(s) 375, 979
BmsI GCATC 2 cut(s) 405, 710
BplI GAGNNNNNCTC 2 cut(s) 789, 821
Bpu10I CCTNAGC 1 cut(s) 308
BpuEI CTTGAG 1 cut(s) 338
BsaHI GRCGYC 1 cut(s) 412
BsaJI CCNNGG 1 cut(s) 977
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 450, 741
Bse1I ACTGG 1 cut(s) 1077
Bse3DI GCAATG 1 cut(s) 609
BseBI CCWGG 2 cut(s) 375, 979
BseDI CCNNGG 1 cut(s) 977
BseGI GGATG 6 cut(s) 258, 301, 349, 634, 683, 774
BseLI CCNNNNNNNGG 3 cut(s) 309, 450, 741
BseMI GCAATG 1 cut(s) 609
BseMII CTCAG 2 cut(s) 555, 820
BseNI ACTGG 1 cut(s) 1077
BseXI GCAGC 4 cut(s) 260, 325, 519, 586
BsgI GTGCAG 1 cut(s) 313
Bsh1236I CGCG 1 cut(s) 866
BshFI GGCC 3 cut(s) 1004, 1094, 1139
BsiHKCI CYCGRG 1 cut(s) 795
BslFI GGGAC 1 cut(s) 1107
BslI CCNNNNNNNGG 3 cut(s) 309, 450, 741
BsmAI GTCTC 4 cut(s) 343, 419, 501, 1040
BsmBI CGTCTC 2 cut(s) 419, 1040
BsmFI GGGAC 1 cut(s) 1107
BsmI GAATGC 1 cut(s) 186
BsnI GGCC 3 cut(s) 1004, 1094, 1139
BsoBI CYCGRG 1 cut(s) 795
Bsp1286I GDGCHC 1 cut(s) 303
Bsp143I GATC 1 cut(s) 130
BspANI GGCC 3 cut(s) 1004, 1094, 1139
BspCNI CTCAG 2 cut(s) 554, 819
BspFNI CGCG 1 cut(s) 866
BspHI TCATGA 1 cut(s) 366
BspLI GGNNCC 1 cut(s) 976
BspMAI CTGCAG 1 cut(s) 337
BspPI GGATC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 609
BsrI ACTGG 1 cut(s) 1077
BssECI CCNNGG 1 cut(s) 977
BssMI GATC 1 cut(s) 130
BssNI GRCGYC 1 cut(s) 412
Bst2UI CCWGG 2 cut(s) 375, 979
Bst4CI ACNGT 7 cut(s) 492, 740, 763, 778, 815, 1034, 1060
Bst6I CTCTTC 1 cut(s) 499
BstACI GRCGYC 1 cut(s) 412
BstC8I GCNNGC 3 cut(s) 80, 278, 406
BstDEI CTNAG 6 cut(s) 24, 308, 541, 656, 806, 1109
BstENI CCTNNNNNAGG 1 cut(s) 307
BstF5I GGATG 6 cut(s) 258, 301, 349, 634, 683, 774
BstFNI CGCG 1 cut(s) 866
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 1 cut(s) 120
BstKTI GATC 1 cut(s) 133
BstMAI GTCTC 4 cut(s) 343, 419, 501, 1040
BstMBI GATC 1 cut(s) 130
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNI CCWGG 2 cut(s) 375, 979
BstNSI RCATGY 4 cut(s) 280, 854, 873, 987
BstSCI CCNGG 2 cut(s) 373, 977
BstSFI CTRYAG 4 cut(s) 333, 488, 675, 819
BstUI CGCG 1 cut(s) 866
BstV1I GCAGC 4 cut(s) 260, 325, 519, 586
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
BsuI GTATCC 1 cut(s) 801
BsuRI GGCC 3 cut(s) 1004, 1094, 1139
BtgZI GCGATG 1 cut(s) 281
BtsCI GGATG 6 cut(s) 258, 301, 349, 634, 683, 774
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 2 cut(s) 330, 814
Cac8I GCNNGC 3 cut(s) 80, 278, 406
CaiI CAGNNNCTG 2 cut(s) 196, 813
CciI TCATGA 1 cut(s) 366
CfoI GCGC 1 cut(s) 120
Cfr13I GGNCC 2 cut(s) 974, 1093
CseI GACGC 1 cut(s) 872
Csp6I GTAC 3 cut(s) 89, 816, 895
CviQI GTAC 3 cut(s) 89, 816, 895
DdeI CTNAG 6 cut(s) 24, 308, 541, 656, 806, 1109
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
DraI TTTAAA 1 cut(s) 430
DraIII CACNNNGTG 1 cut(s) 809
EaeI YGGCCR 1 cut(s) 1002
Eam1104I CTCTTC 1 cut(s) 499
EarI CTCTTC 1 cut(s) 499
Eco24I GRGCYC 1 cut(s) 303
Eco47I GGWCC 1 cut(s) 974
Eco57I CTGAAG 3 cut(s) 218, 226, 579
Eco88I CYCGRG 1 cut(s) 795
EcoNI CCTNNNNNAGG 1 cut(s) 307
EcoO109I RGGNCCY 1 cut(s) 974
EcoRI GAATTC 1 cut(s) 145
EcoRII CCWGG 2 cut(s) 373, 977
EcoT22I ATGCAT 1 cut(s) 875
EcoT38I GRGCYC 1 cut(s) 303
Esp3I CGTCTC 2 cut(s) 419, 1040
FaqI GGGAC 1 cut(s) 1107
Fnu4HI GCNGC 4 cut(s) 274, 314, 533, 600
FokI GGATG 6 cut(s) 265, 308, 356, 641, 670, 781
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 4 cut(s) 274, 314, 533, 600
FspBI CTAG 5 cut(s) 206, 381, 924, 1082, 1104
GlaI GCGC 1 cut(s) 119
GluI GCNGC 4 cut(s) 274, 314, 533, 600
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 3 cut(s) 1004, 1094, 1139
HgaI GACGC 1 cut(s) 872
HhaI GCGC 1 cut(s) 120
Hin1I GRCGYC 1 cut(s) 412
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HincII GTYRAC 1 cut(s) 774
HindII GTYRAC 1 cut(s) 774
HindIII AAGCTT 2 cut(s) 76, 223
HinfI GANTC 5 cut(s) 348, 370, 509, 539, 993
HphI GGTGA 1 cut(s) 1022
Hpy166II GTNNAC 4 cut(s) 89, 774, 856, 1056
Hpy188I TCNGA 4 cut(s) 130, 192, 343, 544
Hpy188III TCNNGA 6 cut(s) 367, 626, 924, 972, 1070, 1082
Hpy8I GTNNAC 4 cut(s) 89, 774, 856, 1056
HpyAV CCTTC 8 cut(s) 444, 454, 689, 739, 818, 915, 930, 1084
HpyCH4III ACNGT 7 cut(s) 492, 740, 763, 778, 815, 1034, 1060
HpyCH4IV ACGT 1 cut(s) 412
HpyCH4V TGCA 9 cut(s) 276, 330, 335, 535, 578, 602, 803, 873, 1046
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 6 cut(s) 24, 308, 541, 656, 806, 1109
HpySE526I ACGT 1 cut(s) 412
Hsp92I GRCGYC 1 cut(s) 412
HspAI GCGC 1 cut(s) 118
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 698
Lsp1109I GCAGC 4 cut(s) 260, 325, 519, 586
LweI GCATC 2 cut(s) 405, 710
MaeI CTAG 5 cut(s) 206, 381, 924, 1082, 1104
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 1 cut(s) 809
MalI GATC 1 cut(s) 132
MboI GATC 1 cut(s) 130
MboII GAAGA 7 cut(s) 147, 211, 459, 491, 516, 728, 1019
MfeI CAATTG 1 cut(s) 668
MflI RGATCY 1 cut(s) 130
MhlI GDGCHC 1 cut(s) 303
MlsI TGGCCA 1 cut(s) 1004
MluCI AATT 6 cut(s) 145, 170, 573, 668, 705, 911
MluNI TGGCCA 1 cut(s) 1004
MlyI GAGTC 2 cut(s) 503, 533
MmeI TCCRAC 1 cut(s) 722
MnlI CCTC 5 cut(s) 243, 528, 655, 722, 804
Mox20I TGGCCA 1 cut(s) 1004
Mph1103I ATGCAT 1 cut(s) 875
MscI TGGCCA 1 cut(s) 1004
MseI TTAA 3 cut(s) 429, 723, 753
MslI CAYNNNNRTG 2 cut(s) 281, 1051
Msp20I TGGCCA 1 cut(s) 1004
MspA1I CMGCKG 1 cut(s) 599
MspR9I CCNGG 2 cut(s) 375, 979
MunI CAATTG 1 cut(s) 668
Mva1269I GAATGC 1 cut(s) 186
MvaI CCWGG 2 cut(s) 375, 979
MvnI CGCG 1 cut(s) 866
MwoI GCNNNNNNNGC 1 cut(s) 313
NdeII GATC 1 cut(s) 130
NlaIV GGNNCC 1 cut(s) 976
NmuCI GTSAC 1 cut(s) 809
NsiI ATGCAT 1 cut(s) 875
NspI RCATGY 4 cut(s) 280, 854, 873, 987
PaeI GCATGC 1 cut(s) 280
PaeR7I CTCGAG 1 cut(s) 795
PagI TCATGA 1 cut(s) 366
PctI GAATGC 1 cut(s) 186
PfeI GAWTC 3 cut(s) 348, 370, 993
PkrI GCNGC 4 cut(s) 275, 315, 534, 601
PleI GAGTC 2 cut(s) 503, 533
PpsI GAGTC 2 cut(s) 503, 533
PpuMI RGGWCCY 1 cut(s) 974
PshBI ATTAAT 1 cut(s) 723
PsiI TTATAA 1 cut(s) 572
Psp5II RGGWCCY 1 cut(s) 974
Psp6I CCWGG 2 cut(s) 373, 977
PspGI CCWGG 2 cut(s) 373, 977
PspN4I GGNNCC 1 cut(s) 976
PspPI GGNCC 2 cut(s) 974, 1093
PspPPI RGGWCCY 1 cut(s) 974
PspXI VCTCGAGB 1 cut(s) 795
PstI CTGCAG 1 cut(s) 337
PstNI CAGNNNCTG 2 cut(s) 196, 813
PsuI RGATCY 1 cut(s) 130
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 3 cut(s) 90, 817, 896
RsaNI GTAC 3 cut(s) 89, 816, 895
RseI CAYNNNNRTG 2 cut(s) 281, 1051
SaqAI TTAA 3 cut(s) 429, 723, 753
SatI GCNGC 4 cut(s) 274, 314, 533, 600
Sau3AI GATC 1 cut(s) 130
Sau96I GGNCC 2 cut(s) 974, 1093
SchI GAGTC 2 cut(s) 503, 533
ScrFI CCNGG 2 cut(s) 375, 979
SduI GDGCHC 1 cut(s) 303
SfaNI GCATC 2 cut(s) 405, 710
SfcI CTRYAG 4 cut(s) 333, 488, 675, 819
Sfr274I CTCGAG 1 cut(s) 795
SinI GGWCC 1 cut(s) 974
SlaI CTCGAG 1 cut(s) 795
SmiMI CAYNNNNRTG 2 cut(s) 281, 1051
SmlI CTYRAG 2 cut(s) 317, 795
SmoI CTYRAG 2 cut(s) 317, 795
SphI GCATGC 1 cut(s) 280
Sse9I AATT 6 cut(s) 145, 170, 573, 668, 705, 911
SspMI CTAG 5 cut(s) 206, 381, 924, 1082, 1104
StyD4I CCNGG 2 cut(s) 373, 977
TaaI ACNGT 7 cut(s) 492, 740, 763, 778, 815, 1034, 1060
TaiI ACGT 1 cut(s) 415
TaqI TCGA 4 cut(s) 174, 714, 796, 1062
TasI AATT 6 cut(s) 145, 170, 573, 668, 705, 911
TatI WGTACW 1 cut(s) 815
TfiI GAWTC 3 cut(s) 348, 370, 993
Tru1I TTAA 3 cut(s) 429, 723, 753
Tru9I TTAA 3 cut(s) 429, 723, 753
TscAI CASTG 2 cut(s) 337, 814
TseFI GTSAC 1 cut(s) 809
TseI GCWGC 4 cut(s) 273, 313, 532, 599
Tsp45I GTSAC 1 cut(s) 809
TspDTI ATGAA 5 cut(s) 151, 158, 540, 946, 948
TspRI CASTG 2 cut(s) 337, 814
VpaK11BI GGWCC 1 cut(s) 974
VspI ATTAAT 1 cut(s) 723
XagI CCTNNNNNAGG 1 cut(s) 307
XapI RAATTY 3 cut(s) 145, 170, 911
XbaI TCTAGA 2 cut(s) 923, 1081
XceI RCATGY 4 cut(s) 280, 854, 873, 987
XcmI CCANNNNNNNNNTGG 1 cut(s) 985
XhoI CTCGAG 1 cut(s) 795
XspI CTAG 5 cut(s) 206, 381, 924, 1082, 1104
ZraI GACGTC 1 cut(s) 413
Zsp2I ATGCAT 1 cut(s) 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.