Exopolygalacturonase-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g41700 |
| malus_domestica | MD16G1223700.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0074791 |
| rosa_laevigata | RLG00000036505 |
| rosa_multiflora | Rmu_sc0000909.1_g000008 Rmu_sc0001066.1_g000014 Rmu_sc0005365.1_g000003 Rmu_sc0005365.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00006780 Rroxscaffold_1G00006790 |
| rosa_rugosa | Rorug05G0433800 |
| rosa_samantha | Rh5AG491700 Rh5BG513100 Rh5CG536800 Rh5DG525200 Rh6BG029400 Rh6CG029700 |
| rosa_wichuraiana | Rw5G045540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 161 |
| AclI | AACGTT | 2 cut(s) | 360, 390 |
| AcsI | RAATTY | 1 cut(s) | 21 |
| AcuI | CTGAAG | 1 cut(s) | 203 |
| AgsI | TTSAA | 4 cut(s) | 26, 215, 358, 388 |
| AjiI | CACGTC | 1 cut(s) | 46 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 207, 239 |
| AluBI | AGCT | 1 cut(s) | 78 |
| AluI | AGCT | 1 cut(s) | 78 |
| ApoI | RAATTY | 1 cut(s) | 21 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuC2I | CCSGG | 1 cut(s) | 441 |
| AsuHPI | GGTGA | 2 cut(s) | 120, 261 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BanI | GGYRCC | 1 cut(s) | 161 |
| BccI | CCATC | 1 cut(s) | 437 |
| BciVI | GTATCC | 1 cut(s) | 268 |
| BcnI | CCSGG | 1 cut(s) | 441 |
| BfmI | CTRYAG | 1 cut(s) | 166 |
| BfuI | GTATCC | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 1 cut(s) | 441 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmgBI | CACGTC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmiI | GGNNCC | 2 cut(s) | 163, 207 |
| BmrFI | CCNGG | 1 cut(s) | 441 |
| BmsI | GCATC | 2 cut(s) | 106, 134 |
| BpuMI | CCSGG | 1 cut(s) | 441 |
| BsaJI | CCNNGG | 2 cut(s) | 131, 226 |
| BsaWI | WCCGGW | 1 cut(s) | 271 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 435 |
| Bse3DI | GCAATG | 2 cut(s) | 196, 233 |
| BseDI | CCNNGG | 2 cut(s) | 131, 226 |
| BseMI | GCAATG | 2 cut(s) | 196, 233 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BshNI | GGYRCC | 1 cut(s) | 161 |
| BsiSI | CCGG | 2 cut(s) | 272, 441 |
| BsmI | GAATGC | 1 cut(s) | 109 |
| BspCNI | CTCAG | 1 cut(s) | 92 |
| BspLI | GGNNCC | 2 cut(s) | 163, 207 |
| BspT107I | GGYRCC | 1 cut(s) | 161 |
| BsrDI | GCAATG | 2 cut(s) | 196, 233 |
| BssECI | CCNNGG | 2 cut(s) | 131, 226 |
| BstC8I | GCNNGC | 3 cut(s) | 240, 370, 400 |
| BstDEI | CTNAG | 1 cut(s) | 79 |
| BstNSI | RCATGY | 2 cut(s) | 123, 425 |
| BstSCI | CCNGG | 1 cut(s) | 439 |
| BstSFI | CTRYAG | 1 cut(s) | 166 |
| BsuI | GTATCC | 1 cut(s) | 268 |
| BtrI | CACGTC | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 3 cut(s) | 240, 370, 400 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| CviAII | CATG | 2 cut(s) | 120, 422 |
| CviJI | RGCY | 6 cut(s) | 73, 78, 95, 206, 242, 258 |
| CviKI_1 | RGCY | 6 cut(s) | 73, 78, 95, 206, 242, 258 |
| DdeI | CTNAG | 1 cut(s) | 79 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| Eco57I | CTGAAG | 1 cut(s) | 203 |
| EcoT22I | ATGCAT | 1 cut(s) | 121 |
| FaeI | CATG | 2 cut(s) | 123, 425 |
| FaiI | YATR | 5 cut(s) | 63, 121, 287, 326, 423 |
| FatI | CATG | 2 cut(s) | 119, 421 |
| HapII | CCGG | 2 cut(s) | 272, 441 |
| Hin1II | CATG | 2 cut(s) | 123, 425 |
| HincII | GTYRAC | 1 cut(s) | 304 |
| HindII | GTYRAC | 1 cut(s) | 304 |
| HpaII | CCGG | 2 cut(s) | 272, 441 |
| HphI | GGTGA | 2 cut(s) | 120, 261 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 304 |
| Hpy188I | TCNGA | 3 cut(s) | 82, 191, 227 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 304 |
| HpyCH4IV | ACGT | 3 cut(s) | 45, 360, 390 |
| HpyCH4V | TGCA | 6 cut(s) | 56, 119, 125, 201, 238, 425 |
| HpyF3I | CTNAG | 1 cut(s) | 79 |
| HpySE526I | ACGT | 3 cut(s) | 45, 360, 390 |
| Hsp92II | CATG | 2 cut(s) | 123, 425 |
| LmnI | GCTCC | 2 cut(s) | 179, 211 |
| LpnPI | CCDG | 7 cut(s) | 206, 224, 268, 285, 382, 412, 454 |
| LweI | GCATC | 2 cut(s) | 106, 134 |
| MaeII | ACGT | 3 cut(s) | 45, 360, 390 |
| MaeIII | GTNAC | 3 cut(s) | 46, 262, 409 |
| MluCI | AATT | 3 cut(s) | 21, 183, 315 |
| MmeI | TCCRAC | 1 cut(s) | 442 |
| MnlI | CCTC | 5 cut(s) | 40, 126, 152, 185, 221 |
| Mph1103I | ATGCAT | 1 cut(s) | 121 |
| MseI | TTAA | 4 cut(s) | 173, 318, 453, 460 |
| MspI | CCGG | 2 cut(s) | 272, 441 |
| MspR9I | CCNGG | 1 cut(s) | 441 |
| Mva1269I | GAATGC | 1 cut(s) | 109 |
| NciI | CCSGG | 1 cut(s) | 441 |
| NlaIII | CATG | 2 cut(s) | 123, 425 |
| NlaIV | GGNNCC | 2 cut(s) | 163, 207 |
| NmuCI | GTSAC | 2 cut(s) | 46, 262 |
| NsiI | ATGCAT | 1 cut(s) | 121 |
| NspI | RCATGY | 2 cut(s) | 123, 425 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PctI | GAATGC | 1 cut(s) | 109 |
| PflFI | GACNNNGTC | 1 cut(s) | 299 |
| Psp1406I | AACGTT | 2 cut(s) | 360, 390 |
| PspN4I | GGNNCC | 2 cut(s) | 163, 207 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PsyI | GACNNNGTC | 1 cut(s) | 299 |
| SaqAI | TTAA | 4 cut(s) | 173, 318, 453, 460 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| ScrFI | CCNGG | 1 cut(s) | 441 |
| SetI | ASST | 8 cut(s) | 48, 80, 167, 196, 225, 293, 363, 393 |
| SfaNI | GCATC | 2 cut(s) | 106, 134 |
| SfcI | CTRYAG | 1 cut(s) | 166 |
| SinI | GGWCC | 1 cut(s) | 223 |
| Sse9I | AATT | 3 cut(s) | 21, 183, 315 |
| StyD4I | CCNGG | 1 cut(s) | 439 |
| TaiI | ACGT | 3 cut(s) | 48, 363, 393 |
| TaqI | TCGA | 1 cut(s) | 294 |
| TasI | AATT | 3 cut(s) | 21, 183, 315 |
| Tru1I | TTAA | 4 cut(s) | 173, 318, 453, 460 |
| Tru9I | TTAA | 4 cut(s) | 173, 318, 453, 460 |
| TseFI | GTSAC | 2 cut(s) | 46, 262 |
| Tsp45I | GTSAC | 2 cut(s) | 46, 262 |
| Tth111I | GACNNNGTC | 1 cut(s) | 299 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| XapI | RAATTY | 1 cut(s) | 21 |
| XceI | RCATGY | 2 cut(s) | 123, 425 |
| Zsp2I | ATGCAT | 1 cut(s) | 121 |