Exopolygalacturonase-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g41700 |
| malus_domestica | MD16G1223700.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0074791 |
| rosa_laevigata | RLG00000036505 |
| rosa_multiflora | Rmu_sc0000909.1_g000008 Rmu_sc0001066.1_g000014 Rmu_sc0005365.1_g000003 Rmu_sc0005365.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00006780 Rroxscaffold_1G00006790 |
| rosa_rugosa | Rorug05G0433800 |
| rosa_samantha | Rh5AG491700 Rh5BG513100 Rh5CG536800 Rh5DG525200 Rh6BG029400 Rh6CG029700 |
| rosa_wichuraiana | Rw5G045540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 206 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 1 cut(s) | 66 |
| AcuI | CTGAAG | 1 cut(s) | 248 |
| AfaI | GTAC | 1 cut(s) | 341 |
| AgsI | TTSAA | 2 cut(s) | 71, 260 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 252, 284 |
| AluBI | AGCT | 1 cut(s) | 123 |
| AluI | AGCT | 1 cut(s) | 123 |
| AlwI | GGATC | 1 cut(s) | 12 |
| ApoI | RAATTY | 1 cut(s) | 66 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 19, 51 |
| AseI | ATTAAT | 1 cut(s) | 14 |
| AspS9I | GGNCC | 1 cut(s) | 268 |
| AsuHPI | GGTGA | 2 cut(s) | 165, 306 |
| AvaII | GGWCC | 1 cut(s) | 268 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 312, 345 |
| BanI | GGYRCC | 1 cut(s) | 206 |
| BciVI | GTATCC | 1 cut(s) | 313 |
| BfmI | CTRYAG | 1 cut(s) | 211 |
| BfuI | GTATCC | 1 cut(s) | 313 |
| Bme18I | GGWCC | 1 cut(s) | 268 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 1 cut(s) | 268 |
| BmiI | GGNNCC | 3 cut(s) | 208, 252, 288 |
| BmsI | GCATC | 2 cut(s) | 151, 179 |
| BsaJI | CCNNGG | 2 cut(s) | 176, 271 |
| BsaWI | WCCGGW | 1 cut(s) | 316 |
| Bse3DI | GCAATG | 2 cut(s) | 241, 278 |
| BseDI | CCNNGG | 2 cut(s) | 176, 271 |
| BseMI | GCAATG | 2 cut(s) | 241, 278 |
| BseMII | CTCAG | 1 cut(s) | 138 |
| BshNI | GGYRCC | 1 cut(s) | 206 |
| BsiSI | CCGG | 1 cut(s) | 317 |
| BsmI | GAATGC | 1 cut(s) | 154 |
| Bsp143I | GATC | 1 cut(s) | 4 |
| BspCNI | CTCAG | 1 cut(s) | 137 |
| BspLI | GGNNCC | 3 cut(s) | 208, 252, 288 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 1 cut(s) | 206 |
| BsrDI | GCAATG | 2 cut(s) | 241, 278 |
| BssECI | CCNNGG | 2 cut(s) | 176, 271 |
| BssMI | GATC | 1 cut(s) | 4 |
| BstC8I | GCNNGC | 1 cut(s) | 285 |
| BstDEI | CTNAG | 1 cut(s) | 124 |
| BstKTI | GATC | 1 cut(s) | 7 |
| BstMBI | GATC | 1 cut(s) | 4 |
| BstNSI | RCATGY | 1 cut(s) | 168 |
| BstSFI | CTRYAG | 1 cut(s) | 211 |
| BsuI | GTATCC | 1 cut(s) | 313 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 1 cut(s) | 268 |
| Csp6I | GTAC | 1 cut(s) | 340 |
| CviAII | CATG | 1 cut(s) | 165 |
| CviJI | RGCY | 6 cut(s) | 118, 123, 140, 251, 287, 303 |
| CviKI_1 | RGCY | 6 cut(s) | 118, 123, 140, 251, 287, 303 |
| CviQI | GTAC | 1 cut(s) | 340 |
| DdeI | CTNAG | 1 cut(s) | 124 |
| DpnI | GATC | 1 cut(s) | 6 |
| DpnII | GATC | 1 cut(s) | 4 |
| Eco47I | GGWCC | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 1 cut(s) | 248 |
| EcoT22I | ATGCAT | 1 cut(s) | 166 |
| FaeI | CATG | 1 cut(s) | 168 |
| FaiI | YATR | 4 cut(s) | 108, 166, 347, 349 |
| FatI | CATG | 1 cut(s) | 164 |
| HapII | CCGG | 1 cut(s) | 317 |
| Hin1II | CATG | 1 cut(s) | 168 |
| HpaII | CCGG | 1 cut(s) | 317 |
| HphI | GGTGA | 2 cut(s) | 165, 306 |
| Hpy166II | GTNNAC | 1 cut(s) | 57 |
| Hpy188I | TCNGA | 4 cut(s) | 9, 127, 236, 272 |
| Hpy188III | TCNNGA | 1 cut(s) | 25 |
| Hpy8I | GTNNAC | 1 cut(s) | 57 |
| HpyCH4IV | ACGT | 2 cut(s) | 21, 90 |
| HpyCH4V | TGCA | 5 cut(s) | 101, 164, 170, 246, 283 |
| HpyF3I | CTNAG | 1 cut(s) | 124 |
| HpySE526I | ACGT | 2 cut(s) | 21, 90 |
| Hsp92II | CATG | 1 cut(s) | 168 |
| Kzo9I | GATC | 1 cut(s) | 4 |
| LmnI | GCTCC | 3 cut(s) | 224, 256, 292 |
| LpnPI | CCDG | 4 cut(s) | 251, 269, 313, 330 |
| LweI | GCATC | 2 cut(s) | 151, 179 |
| MaeII | ACGT | 2 cut(s) | 21, 90 |
| MaeIII | GTNAC | 2 cut(s) | 91, 307 |
| MalI | GATC | 1 cut(s) | 6 |
| MboI | GATC | 1 cut(s) | 4 |
| MluCI | AATT | 3 cut(s) | 11, 66, 228 |
| MnlI | CCTC | 5 cut(s) | 85, 171, 197, 230, 266 |
| Mph1103I | ATGCAT | 1 cut(s) | 166 |
| MseI | TTAA | 3 cut(s) | 14, 44, 218 |
| MspI | CCGG | 1 cut(s) | 317 |
| Mva1269I | GAATGC | 1 cut(s) | 154 |
| NdeII | GATC | 1 cut(s) | 4 |
| NlaIII | CATG | 1 cut(s) | 168 |
| NlaIV | GGNNCC | 3 cut(s) | 208, 252, 288 |
| NmuCI | GTSAC | 2 cut(s) | 91, 307 |
| NsiI | ATGCAT | 1 cut(s) | 166 |
| NspI | RCATGY | 1 cut(s) | 168 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 87 |
| PctI | GAATGC | 1 cut(s) | 154 |
| PshBI | ATTAAT | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 3 cut(s) | 208, 252, 288 |
| PspPI | GGNCC | 1 cut(s) | 268 |
| RsaI | GTAC | 1 cut(s) | 341 |
| RsaNI | GTAC | 1 cut(s) | 340 |
| SaqAI | TTAA | 3 cut(s) | 14, 44, 218 |
| Sau3AI | GATC | 1 cut(s) | 4 |
| Sau96I | GGNCC | 1 cut(s) | 268 |
| SetI | ASST | 7 cut(s) | 24, 93, 125, 212, 241, 270, 345 |
| SfaNI | GCATC | 2 cut(s) | 151, 179 |
| SfcI | CTRYAG | 1 cut(s) | 211 |
| SinI | GGWCC | 1 cut(s) | 268 |
| Sse9I | AATT | 3 cut(s) | 11, 66, 228 |
| SspI | AATATT | 1 cut(s) | 33 |
| TaiI | ACGT | 2 cut(s) | 24, 93 |
| TasI | AATT | 3 cut(s) | 11, 66, 228 |
| Tru1I | TTAA | 3 cut(s) | 14, 44, 218 |
| Tru9I | TTAA | 3 cut(s) | 14, 44, 218 |
| TseFI | GTSAC | 2 cut(s) | 91, 307 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 307 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| VpaK11BI | GGWCC | 1 cut(s) | 268 |
| VspI | ATTAAT | 1 cut(s) | 14 |
| XapI | RAATTY | 1 cut(s) | 66 |
| XceI | RCATGY | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 1 cut(s) | 166 |