Rmu_sc0001267.1_g000015

CRM domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001267.1
Physical Location & Seq
Reverse (-)
61462 .. 64847
3386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001267.1_g000015.1.cds

Sequence Viewer

Length: 1347 bp
atgtgcatcccacttgacttaaacttaccgacttgcaccgcacgtgcctcattagagtccgtgacgttgctttatcgatggccaaaaccagggacaagaaaggtttcaaagtctcagggcagcattttatgtggagcagattgttgtgttcttgtttatgatgtgaatgttctaagatcatttgaaacacttcagaactggcatgaagagtttctcaaacaggtaggtccagctgacactgaggcatttccatttatactactcggcaacaaaattgatatagatggcggaaacagcagagcgactctggctgtggctggattttcaaggatgggcatcgcaggaggaacaaggaattcgttgctccgcttctgttgtttggccaaaaatgtgttaggcctctctctgccaaccataggctctcttccttgtcacatgtgtatacaaaggcaaagctaccgggttatggcatctttcatactcccagtagattctgcattgctgggccgatcaaatatgtataagtatcaaactcttctcagaaatttgccacccaccagatgcatgagtaggacttcgtttgagctcaacacagacaatggtgttgtgcggttttcaattggtaagccacttgatgaaactagttccttgacacaagggaagaaggtggccaaacaagttaaaatgtccaagaaggccaaactgaatgaactacgattttatcgtctaaaggccaaaaagaagatcaattctccaaatccggaagttaggattagatacaaactggaaaaggcaaaacgaaaggaagcatggttgattgagaagttgagaaaattccaggttcacaaagcttctgctgaaacacatgatcctgaaattttaactgaagaagaaaagcattatcttaagcgaactggtgagaaaaagaagcactatgtgccagttggaaggcggggagtatttggaggggttgttttaaatatgcatctgcattggaagaagcacgagacagtaaaggttatatgcaaaccttgtaagccaggacaggttcatgaatatgctgatgagctagctcggctgagcaaaggcatagtgattgacatcaaacctaataatactgtaattttctatcgggggaagaactatgtgcagccggaagtaatgtcaccaccagatacactgtccaaaaataaggcgctcgaaaaatataggtatgagcagtccctcgaacatacaggtcagtttattgaaaaattggagaaagaactagaggaatatcaccagcatcttgctcggtttaagaaagtaaaagaggatacgacacaagattgtttgatctatagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

448

Amino Acids

51.19

Weight (kDa)

9.62

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 442
AccIII TCCGGA 1 cut(s) 760
AciI CCGC 5 cut(s) 39, 288, 367, 610, 952
AclWI GGATC 1 cut(s) 863
AcoI YGGCCR 3 cut(s) 80, 381, 669
AcsI RAATTY 4 cut(s) 355, 544, 833, 876
AcuI CTGAAG 2 cut(s) 176, 906
AcvI CACGTG 1 cut(s) 44
AdeI CACNNNGTG 1 cut(s) 937
AfiI CCNNNNNNNGG 3 cut(s) 89, 416, 466
AflII CTTAAG 1 cut(s) 905
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 5 cut(s) 108, 185, 327, 618, 1250
AhlI ACTAGT 1 cut(s) 641
AjnI CCWGG 3 cut(s) 88, 837, 1039
AluBI AGCT 6 cut(s) 233, 456, 586, 851, 1069, 1073
AluI AGCT 6 cut(s) 233, 456, 586, 851, 1069, 1073
Alw21I GWGCWC 1 cut(s) 588
Alw26I GTCTC 2 cut(s) 117, 1001
AlwI GGATC 1 cut(s) 863
Aor13HI TCCGGA 1 cut(s) 760
AoxI GGCC 7 cut(s) 80, 381, 397, 505, 669, 696, 732
ApeKI GCWGC 2 cut(s) 120, 1150
ApoI RAATTY 4 cut(s) 355, 544, 833, 876
Asp700I GAANNNNTTC 3 cut(s) 103, 189, 210
AspLEI GCGC 1 cut(s) 1198
AspS9I GGNCC 2 cut(s) 227, 505
AsuC2I CCSGG 1 cut(s) 461
AsuHPI GGTGA 3 cut(s) 929, 1158, 1271
AsuNHI GCTAGC 1 cut(s) 1069
AvaII GGWCC 1 cut(s) 227
BalI TGGCCA 3 cut(s) 82, 383, 671
BanII GRGCYC 1 cut(s) 588
BauI CACGAG 1 cut(s) 1004
BbrPI CACGTG 1 cut(s) 44
Bbv12I GWGCWC 1 cut(s) 588
BbvI GCAGC 2 cut(s) 132, 1162
BccI CCATC 3 cut(s) 72, 278, 325
BcgI CGANNNNNNTGC 2 cut(s) 1274, 1308
BciT130I CCWGG 3 cut(s) 90, 839, 1041
BciVI GTATCC 1 cut(s) 1309
BcnI CCSGG 1 cut(s) 461
BcoDI GTCTC 2 cut(s) 117, 1001
BcuI ACTAGT 1 cut(s) 641
BfaI CTAG 3 cut(s) 642, 1070, 1268
BfmI CTRYAG 1 cut(s) 1339
BfoI RGCGCY 1 cut(s) 1199
BfrI CTTAAG 1 cut(s) 905
BfuI GTATCC 1 cut(s) 1309
BisI GCNGC 2 cut(s) 121, 1151
BlpI GCTNAGC 1 cut(s) 1079
BlsI GCNGC 2 cut(s) 122, 1152
Bme1390I CCNGG 4 cut(s) 90, 461, 839, 1041
Bme18I GGWCC 1 cut(s) 227
BmgT120I GGNCC 2 cut(s) 227, 505
BmrFI CCNGG 4 cut(s) 90, 461, 839, 1041
BmrI ACTGGG 1 cut(s) 479
BmsI GCATC 6 cut(s) 15, 345, 479, 551, 994, 1294
BmtI GCTAGC 1 cut(s) 1073
BmuI ACTGGG 1 cut(s) 479
Bpu1102I GCTNAGC 1 cut(s) 1079
BpuMI CCSGG 1 cut(s) 461
Bsa29I ATCGAT 1 cut(s) 76
BsaAI YACGTR 1 cut(s) 44
BsaBI GATNNNNATC 2 cut(s) 335, 1100
BsaJI CCNNGG 1 cut(s) 89
BsaWI WCCGGW 1 cut(s) 760
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 416, 466
Bse1I ACTGG 5 cut(s) 203, 485, 789, 919, 941
Bse3DI GCAATG 1 cut(s) 497
Bse8I GATNNNNATC 2 cut(s) 335, 1100
BseAI TCCGGA 1 cut(s) 760
BseBI CCWGG 3 cut(s) 90, 839, 1041
BseCI ATCGAT 1 cut(s) 76
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 2 cut(s) 6, 336
BseJI GATNNNNATC 2 cut(s) 335, 1100
BseLI CCNNNNNNNGG 3 cut(s) 89, 416, 466
BseMI GCAATG 1 cut(s) 497
BseMII CTCAG 4 cut(s) 128, 231, 553, 1070
BseNI ACTGG 5 cut(s) 203, 485, 789, 919, 941
BseXI GCAGC 2 cut(s) 132, 1162
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 1 cut(s) 1169
BshFI GGCC 7 cut(s) 82, 383, 399, 507, 671, 698, 734
BshVI ATCGAT 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 588
BsiSI CCGG 3 cut(s) 460, 761, 1154
BslFI GGGAC 2 cut(s) 106, 1207
BslI CCNNNNNNNGG 3 cut(s) 89, 416, 466
BsmAI GTCTC 2 cut(s) 117, 1001
BsmFI GGGAC 2 cut(s) 106, 1207
BsnI GGCC 7 cut(s) 82, 383, 399, 507, 671, 698, 734
Bsp1286I GDGCHC 1 cut(s) 588
Bsp13I TCCGGA 1 cut(s) 760
Bsp143I GATC 5 cut(s) 176, 509, 744, 868, 1335
Bsp1720I GCTNAGC 1 cut(s) 1079
BspACI CCGC 5 cut(s) 39, 288, 367, 610, 952
BspANI GGCC 7 cut(s) 82, 383, 399, 507, 671, 698, 734
BspCNI CTCAG 4 cut(s) 127, 232, 552, 1071
BspDI ATCGAT 1 cut(s) 76
BspEI TCCGGA 1 cut(s) 760
BspHI TCATGA 1 cut(s) 1051
BspOI GCTAGC 1 cut(s) 1073
BspPI GGATC 1 cut(s) 863
BspTI CTTAAG 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 497
BsrI ACTGG 5 cut(s) 203, 485, 789, 919, 941
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 5 cut(s) 176, 509, 744, 868, 1335
BssNAI GTATAC 1 cut(s) 443
BssSI CACGAG 1 cut(s) 1004
Bst1107I GTATAC 1 cut(s) 443
Bst2BI CACGAG 1 cut(s) 1004
Bst2UI CCWGG 3 cut(s) 90, 839, 1041
Bst4CI ACNGT 3 cut(s) 1012, 1120, 1182
Bst6I CTCTTC 3 cut(s) 201, 429, 540
BstAFI CTTAAG 1 cut(s) 905
BstAPI GCANNNNNTGC 1 cut(s) 937
BstBAI YACGTR 1 cut(s) 44
BstC8I GCNNGC 1 cut(s) 1071
BstDEI CTNAG 5 cut(s) 114, 173, 240, 539, 1079
BstF5I GGATG 2 cut(s) 6, 336
BstH2I RGCGCY 1 cut(s) 1199
BstHHI GCGC 1 cut(s) 1198
BstKTI GATC 5 cut(s) 179, 512, 747, 871, 1338
BstMAI GTCTC 2 cut(s) 117, 1001
BstMBI GATC 5 cut(s) 176, 509, 744, 868, 1335
BstMWI GCNNNNNNNGC 4 cut(s) 294, 308, 937, 1075
BstNI CCWGG 3 cut(s) 90, 839, 1041
BstNSI RCATGY 1 cut(s) 439
BstSCI CCNGG 4 cut(s) 88, 459, 837, 1039
BstSFI CTRYAG 1 cut(s) 1339
BstV1I GCAGC 2 cut(s) 132, 1162
BstZ17I GTATAC 1 cut(s) 443
Bsu15I ATCGAT 1 cut(s) 76
BsuI GTATCC 1 cut(s) 1309
BsuRI GGCC 7 cut(s) 82, 383, 399, 507, 671, 698, 734
BsuTUI ATCGAT 1 cut(s) 76
BtgZI GCGATG 1 cut(s) 322
BtsCI GGATG 2 cut(s) 6, 336
BtsIMutI CAGTG 2 cut(s) 237, 1178
Cac8I GCNNGC 1 cut(s) 1071
CciI TCATGA 1 cut(s) 1051
CfoI GCGC 1 cut(s) 1198
Cfr13I GGNCC 2 cut(s) 227, 505
ClaI ATCGAT 1 cut(s) 76
CviAII CATG 6 cut(s) 203, 436, 565, 810, 866, 1052
DdeI CTNAG 5 cut(s) 114, 173, 240, 539, 1079
DpnI GATC 5 cut(s) 178, 511, 746, 870, 1337
DpnII GATC 5 cut(s) 176, 509, 744, 868, 1335
DraI TTTAAA 1 cut(s) 978
DraIII CACNNNGTG 1 cut(s) 937
EaeI YGGCCR 3 cut(s) 80, 381, 669
Eam1104I CTCTTC 3 cut(s) 201, 429, 540
EarI CTCTTC 3 cut(s) 201, 429, 540
EciI GGCGGA 1 cut(s) 303
Ecl136II GAGCTC 1 cut(s) 586
Eco147I AGGCCT 1 cut(s) 399
Eco24I GRGCYC 1 cut(s) 588
Eco47I GGWCC 1 cut(s) 227
Eco53kI GAGCTC 1 cut(s) 586
Eco57I CTGAAG 2 cut(s) 176, 906
Eco72I CACGTG 1 cut(s) 44
EcoICRI GAGCTC 1 cut(s) 586
EcoRI GAATTC 1 cut(s) 355
EcoRII CCWGG 3 cut(s) 88, 837, 1039
EcoT22I ATGCAT 2 cut(s) 566, 987
EcoT38I GRGCYC 1 cut(s) 588
FaeI CATG 6 cut(s) 206, 439, 568, 813, 869, 1055
FaqI GGGAC 2 cut(s) 106, 1207
FatI CATG 6 cut(s) 202, 435, 564, 809, 865, 1051
FauI CCCGC 1 cut(s) 945
FblI GTMKAC 1 cut(s) 442
Fnu4HI GCNGC 2 cut(s) 121, 1151
FokI GGATG 1 cut(s) 343
FriOI GRGCYC 1 cut(s) 588
Fsp4HI GCNGC 2 cut(s) 121, 1151
FspBI CTAG 3 cut(s) 642, 1070, 1268
GlaI GCGC 1 cut(s) 1197
GluI GCNGC 2 cut(s) 121, 1151
GsaI CCCAGC 1 cut(s) 506
HaeII RGCGCY 1 cut(s) 1199
HaeIII GGCC 7 cut(s) 82, 383, 399, 507, 671, 698, 734
HapII CCGG 3 cut(s) 460, 761, 1154
HhaI GCGC 1 cut(s) 1198
Hin1II CATG 6 cut(s) 206, 439, 568, 813, 869, 1055
Hin6I GCGC 1 cut(s) 1196
HinP1I GCGC 1 cut(s) 1196
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 3 cut(s) 56, 304, 491
HpaII CCGG 3 cut(s) 460, 761, 1154
HphI GGTGA 3 cut(s) 929, 1158, 1271
Hpy166II GTNNAC 2 cut(s) 443, 844
Hpy188I TCNGA 2 cut(s) 195, 542
Hpy188III TCNNGA 3 cut(s) 761, 872, 1052
Hpy8I GTNNAC 2 cut(s) 443, 844
HpyAV CCTTC 3 cut(s) 658, 688, 942
HpyCH4III ACNGT 3 cut(s) 1012, 1120, 1182
HpyCH4IV ACGT 2 cut(s) 43, 65
HpyCH4V TGCA 8 cut(s) 6, 36, 497, 564, 985, 991, 1026, 1150
HpyF10VI GCNNNNNNNGC 4 cut(s) 294, 308, 937, 1075
HpyF3I CTNAG 5 cut(s) 114, 173, 240, 539, 1079
HpySE526I ACGT 2 cut(s) 43, 65
Hsp92II CATG 6 cut(s) 206, 439, 568, 813, 869, 1055
HspAI GCGC 1 cut(s) 1196
Kpn2I TCCGGA 1 cut(s) 760
Kzo9I GATC 5 cut(s) 176, 509, 744, 868, 1335
LmnI GCTCC 2 cut(s) 134, 369
Lsp1109I GCAGC 2 cut(s) 132, 1162
LweI GCATC 6 cut(s) 15, 345, 479, 551, 994, 1294
MaeI CTAG 3 cut(s) 642, 1070, 1268
MaeII ACGT 2 cut(s) 43, 65
MaeIII GTNAC 3 cut(s) 61, 431, 1164
MalI GATC 5 cut(s) 178, 511, 746, 870, 1337
MboI GATC 5 cut(s) 176, 509, 744, 868, 1335
MboII GAAGA 9 cut(s) 218, 416, 527, 673, 754, 899, 902, 1009, 1150
MfeI CAATTG 1 cut(s) 618
MhlI GDGCHC 1 cut(s) 588
MlsI TGGCCA 3 cut(s) 82, 383, 671
MluCI AATT 9 cut(s) 273, 355, 544, 618, 748, 833, 876, 1122, 1253
MluNI TGGCCA 3 cut(s) 82, 383, 671
MlyI GAGTC 2 cut(s) 65, 298
MmeI TCCRAC 1 cut(s) 925
MnlI CCTC 8 cut(s) 58, 235, 338, 410, 959, 1235, 1264, 1306
Mox20I TGGCCA 3 cut(s) 82, 383, 671
Mph1103I ATGCAT 2 cut(s) 566, 987
MroI TCCGGA 1 cut(s) 760
MroXI GAANNNNTTC 3 cut(s) 103, 189, 210
MscI TGGCCA 3 cut(s) 82, 383, 671
MseI TTAA 6 cut(s) 20, 681, 881, 906, 977, 1299
MslI CAYNNNNRTG 1 cut(s) 1056
Msp20I TGGCCA 3 cut(s) 82, 383, 671
MspA1I CMGCKG 1 cut(s) 233
MspCI CTTAAG 1 cut(s) 905
MspI CCGG 3 cut(s) 460, 761, 1154
MspR9I CCNGG 4 cut(s) 90, 461, 839, 1041
MunI CAATTG 1 cut(s) 618
MvaI CCWGG 3 cut(s) 90, 839, 1041
MwoI GCNNNNNNNGC 4 cut(s) 294, 308, 937, 1075
NciI CCSGG 1 cut(s) 461
NdeII GATC 5 cut(s) 176, 509, 744, 868, 1335
NheI GCTAGC 1 cut(s) 1069
NlaIII CATG 6 cut(s) 206, 439, 568, 813, 869, 1055
NmeAIII GCCGAG 2 cut(s) 243, 1054
NmuCI GTSAC 3 cut(s) 61, 431, 1164
NsiI ATGCAT 2 cut(s) 566, 987
NspI RCATGY 1 cut(s) 439
PagI TCATGA 1 cut(s) 1051
PceI AGGCCT 1 cut(s) 399
PciI ACATGT 1 cut(s) 435
PcsI WCGNNNNNNNCGW 1 cut(s) 721
PdmI GAANNNNTTC 3 cut(s) 103, 189, 210
PfeI GAWTC 1 cut(s) 491
PkrI GCNGC 2 cut(s) 122, 1152
PleI GAGTC 2 cut(s) 64, 298
PmaCI CACGTG 1 cut(s) 44
PmlI CACGTG 1 cut(s) 44
PpsI GAGTC 2 cut(s) 64, 298
Ppu21I YACGTR 1 cut(s) 44
PscI ACATGT 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 88, 837, 1039
PspCI CACGTG 1 cut(s) 44
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 3 cut(s) 88, 837, 1039
PspPI GGNCC 2 cut(s) 227, 505
PvuII CAGCTG 1 cut(s) 233
RseI CAYNNNNRTG 1 cut(s) 1056
SacI GAGCTC 1 cut(s) 588
SaqAI TTAA 6 cut(s) 20, 681, 881, 906, 977, 1299
SatI GCNGC 2 cut(s) 121, 1151
Sau3AI GATC 5 cut(s) 176, 509, 744, 868, 1335
Sau96I GGNCC 2 cut(s) 227, 505
SchI GAGTC 2 cut(s) 65, 298
ScrFI CCNGG 4 cut(s) 90, 461, 839, 1041
SduI GDGCHC 1 cut(s) 588
SfaNI GCATC 6 cut(s) 15, 345, 479, 551, 994, 1294
SfcI CTRYAG 1 cut(s) 1339
SinI GGWCC 1 cut(s) 227
SmiMI CAYNNNNRTG 1 cut(s) 1056
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
SpeI ACTAGT 1 cut(s) 641
Sse9I AATT 9 cut(s) 273, 355, 544, 618, 748, 833, 876, 1122, 1253
SseBI AGGCCT 1 cut(s) 399
SsiI CCGC 5 cut(s) 39, 288, 367, 610, 952
SspMI CTAG 3 cut(s) 642, 1070, 1268
SstI GAGCTC 1 cut(s) 588
StuI AGGCCT 1 cut(s) 399
StyD4I CCNGG 4 cut(s) 88, 459, 837, 1039
TaaI ACNGT 3 cut(s) 1012, 1120, 1182
TaiI ACGT 2 cut(s) 46, 68
TaqI TCGA 3 cut(s) 76, 1200, 1227
TasI AATT 9 cut(s) 273, 355, 544, 618, 748, 833, 876, 1122, 1253
TfiI GAWTC 1 cut(s) 491
Tru1I TTAA 6 cut(s) 20, 681, 881, 906, 977, 1299
Tru9I TTAA 6 cut(s) 20, 681, 881, 906, 977, 1299
TscAI CASTG 2 cut(s) 244, 1185
TseFI GTSAC 3 cut(s) 61, 431, 1164
TseI GCWGC 2 cut(s) 120, 1150
Tsp45I GTSAC 3 cut(s) 61, 431, 1164
TspDTI ATGAA 6 cut(s) 219, 466, 651, 723, 1040, 1068
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 2 cut(s) 244, 1185
Vha464I CTTAAG 1 cut(s) 905
VpaK11BI GGWCC 1 cut(s) 227
XapI RAATTY 4 cut(s) 355, 544, 833, 876
XceI RCATGY 1 cut(s) 439
XmiI GTMKAC 1 cut(s) 442
XmnI GAANNNNTTC 3 cut(s) 103, 189, 210
XspI CTAG 3 cut(s) 642, 1070, 1268
Zsp2I ATGCAT 2 cut(s) 566, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.