Rh3CG331800

CRM domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
36884618 .. 36891016
6399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG331800.1

Sequence Viewer

Length: 1377 bp
ATGGCCAAAACCAGGGTCACCCATCTGCCCAAAGAGAAAAAAAAAAAAAAAAATTTATCTGCAACCAAGCTTGCTTTGTTTTCTGATTTGCTCCAAACGGGAGATTTGGGACACAGCAGGACAAGAAAGGTTTCAAAGTCTCAGGGCAGCATTTTATGTGGAGCAGATTGTTGTGTTCTTGTTTATGATGTGAATGTTCTAAGATCATTTGAAACACTTCAGAACTGGCATGAAGAGTTTCTCAAACAGCAGGTAGGTCCAGCTGACACTGAGGCATTTCCATTTATACTACTCGGCAACAAAATTGATATAGATGGCGGAAACAGCAGAGCGACTCTGGCTGTGGCTGGATTTTCAAGGATGGGCATCGCAGGAGGAACAAGGAATTCGTTGCTCCGCTTCTGTTGTTTGGCCAAAAATGTGTTAGGCCTCTCTCTGCCAACCATAGGCTCTCTTCCTTGTCACATGTGTATACAAAGGCAAAGCTACCGGGTTATGGCATCTTTCATACTCCCAGTAGATTCTGCATTGCTGGGTCGATCAAATATGTATAAGTATCAAACTCTTCTCAGAAATTTGCCACCCACCAGATGCATGAGTAGGACTTCGTTTGAGCTCAACACAGACAATGGTGTTGTGCGGTTTTCAATTGGTAAGCCACTTGATGAAACTAGTTCCTTGACACAAGGGAAGAAGGTGGCCAAACAAGTTAAAATGTCCAAGAAGGCCAAACTGAATGAACTACGATTTTATCGTCTAAAGGCCAAAAAGAAGATCAATTCTCCAAATCCGGAAGTTAGGATTAGATACAAACTGGAAAAGGCAAAACGAAAGGAAGCATGGTTGATTGAGAAGTTGAGAAAATTCCAGGTTCACAAAGCTTCTGCTGAAACACATGATCCTGAAATTTTAACTGAAGAAGAAAAGCATTATCTTAAGCGAACTGGTGAGAAAAAGAAGCACTATGTGCCAGTTGGAAGGCGGGGAGTATTTGGAGGGGTTGTTTTAAATATGCATCTGCATTGGAAGAAGCACGAGACAGTAAAGGTTATATGCAAACCTTGTAAGCCAGGACAGGTTCATGAATATGCTGATGAGCTAGCTCGGCTGAGCAAAGGCATAGTGATTGACATCAAACCTAATAATACTGTAATTTTCTATCGGGGGAAGAACTATGTGCAGCCGGAAGTAATGTCACCACCAGATACACTGTCCAAAAATAAGGCGCTCGAAAAATATAGGTATGAGCAGTCCCTCGAACATACAGGTCAGTTTATTGAAAAATTGGAGAAAGAACTAGAGGAATATCACCAGCATCTTGCTCGGTTTAAGAAAGTAAAAGAGGATACGACACAAGATTGTTTGATCTATAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

458

Amino Acids

52.34

Weight (kDa)

9.77

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ras PF00071 50 - 105 1.2e-07 Ras family
CRS1_YhbY PF01985 304 - 388 1.8e-18 CRS1 / YhbY (CRM) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 241
AccI GTMKAC 1 cut(s) 472
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 4 cut(s) 318, 397, 640, 982
AclWI GGATC 1 cut(s) 893
AcoI YGGCCR 3 cut(s) 3, 411, 699
AcsI RAATTY 5 cut(s) 52, 385, 574, 863, 906
AcuI CTGAAG 2 cut(s) 203, 936
AdeI CACNNNGTG 1 cut(s) 967
AfiI CCNNNNNNNGG 3 cut(s) 12, 446, 496
AflII CTTAAG 1 cut(s) 935
AflIII ACRYGT 1 cut(s) 465
AgsI TTSAA 5 cut(s) 135, 212, 357, 648, 1280
AhlI ACTAGT 1 cut(s) 671
AjnI CCWGG 3 cut(s) 11, 867, 1069
AluBI AGCT 7 cut(s) 70, 263, 486, 616, 881, 1099, 1103
AluI AGCT 7 cut(s) 70, 263, 486, 616, 881, 1099, 1103
Alw21I GWGCWC 1 cut(s) 618
Alw26I GTCTC 2 cut(s) 144, 1031
AlwI GGATC 1 cut(s) 893
Aor13HI TCCGGA 1 cut(s) 790
AoxI GGCC 6 cut(s) 3, 411, 427, 699, 726, 762
ApeKI GCWGC 2 cut(s) 147, 1180
ApoI RAATTY 5 cut(s) 52, 385, 574, 863, 906
ArsI GACNNNNNNTTYG 1 cut(s) 32
Asp700I GAANNNNTTC 3 cut(s) 130, 216, 237
AspLEI GCGC 1 cut(s) 1228
AspS9I GGNCC 1 cut(s) 257
AsuC2I CCSGG 1 cut(s) 491
AsuHPI GGTGA 4 cut(s) 10, 959, 1188, 1301
AsuNHI GCTAGC 1 cut(s) 1099
AvaII GGWCC 1 cut(s) 257
BalI TGGCCA 3 cut(s) 5, 413, 701
BanII GRGCYC 1 cut(s) 618
BauI CACGAG 1 cut(s) 1034
Bbv12I GWGCWC 1 cut(s) 618
BbvI GCAGC 2 cut(s) 159, 1192
BccI CCATC 3 cut(s) 30, 308, 355
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 3 cut(s) 13, 869, 1071
BciVI GTATCC 1 cut(s) 1339
BcnI CCSGG 1 cut(s) 491
BcoDI GTCTC 2 cut(s) 144, 1031
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 3 cut(s) 672, 1100, 1298
BfmI CTRYAG 1 cut(s) 1369
BfoI RGCGCY 1 cut(s) 1229
BfrI CTTAAG 1 cut(s) 935
BfuAI ACCTGC 1 cut(s) 241
BfuI GTATCC 1 cut(s) 1339
BisI GCNGC 2 cut(s) 148, 1181
BlpI GCTNAGC 1 cut(s) 1109
BlsI GCNGC 2 cut(s) 149, 1182
Bme1390I CCNGG 4 cut(s) 13, 491, 869, 1071
Bme18I GGWCC 1 cut(s) 257
BmgT120I GGNCC 1 cut(s) 257
BmrFI CCNGG 4 cut(s) 13, 491, 869, 1071
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 5 cut(s) 375, 509, 581, 1024, 1324
BmtI GCTAGC 1 cut(s) 1103
BmuI ACTGGG 1 cut(s) 509
Bpu1102I GCTNAGC 1 cut(s) 1109
BpuMI CCSGG 1 cut(s) 491
BsaBI GATNNNNATC 2 cut(s) 365, 1130
BsaJI CCNNGG 1 cut(s) 12
BsaWI WCCGGW 1 cut(s) 790
BsaXI ACNNNNNCTCC 2 cut(s) 987, 1017
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 446, 496
Bse1I ACTGG 5 cut(s) 230, 515, 819, 949, 971
Bse3DI GCAATG 1 cut(s) 527
Bse8I GATNNNNATC 2 cut(s) 365, 1130
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 3 cut(s) 13, 869, 1071
BseDI CCNNGG 1 cut(s) 12
BseGI GGATG 1 cut(s) 366
BseJI GATNNNNATC 2 cut(s) 365, 1130
BseLI CCNNNNNNNGG 3 cut(s) 12, 446, 496
BseMI GCAATG 1 cut(s) 527
BseMII CTCAG 4 cut(s) 155, 261, 583, 1100
BseNI ACTGG 5 cut(s) 230, 515, 819, 949, 971
BseXI GCAGC 2 cut(s) 159, 1192
BseYI CCCAGC 1 cut(s) 532
BsgI GTGCAG 1 cut(s) 1199
BshFI GGCC 6 cut(s) 5, 413, 429, 701, 728, 764
BsiHKAI GWGCWC 1 cut(s) 618
BsiSI CCGG 3 cut(s) 490, 791, 1184
BslFI GGGAC 2 cut(s) 123, 1237
BslI CCNNNNNNNGG 3 cut(s) 12, 446, 496
BsmAI GTCTC 2 cut(s) 144, 1031
BsmFI GGGAC 2 cut(s) 123, 1237
BsnI GGCC 6 cut(s) 5, 413, 429, 701, 728, 764
Bsp1286I GDGCHC 1 cut(s) 618
Bsp13I TCCGGA 1 cut(s) 790
Bsp143I GATC 5 cut(s) 203, 539, 774, 898, 1365
Bsp1720I GCTNAGC 1 cut(s) 1109
BspACI CCGC 4 cut(s) 318, 397, 640, 982
BspANI GGCC 6 cut(s) 5, 413, 429, 701, 728, 764
BspCNI CTCAG 4 cut(s) 154, 262, 582, 1101
BspEI TCCGGA 1 cut(s) 790
BspHI TCATGA 1 cut(s) 1081
BspMI ACCTGC 1 cut(s) 241
BspOI GCTAGC 1 cut(s) 1103
BspPI GGATC 1 cut(s) 893
BspTI CTTAAG 1 cut(s) 935
BsrDI GCAATG 1 cut(s) 527
BsrI ACTGG 5 cut(s) 230, 515, 819, 949, 971
BssECI CCNNGG 1 cut(s) 12
BssMI GATC 5 cut(s) 203, 539, 774, 898, 1365
BssNAI GTATAC 1 cut(s) 473
BssSI CACGAG 1 cut(s) 1034
Bst1107I GTATAC 1 cut(s) 473
Bst2BI CACGAG 1 cut(s) 1034
Bst2UI CCWGG 3 cut(s) 13, 869, 1071
Bst4CI ACNGT 3 cut(s) 1042, 1150, 1212
Bst6I CTCTTC 3 cut(s) 228, 459, 570
BstAFI CTTAAG 1 cut(s) 935
BstAPI GCANNNNNTGC 1 cut(s) 967
BstC8I GCNNGC 2 cut(s) 72, 1101
BstDEI CTNAG 5 cut(s) 141, 200, 270, 569, 1109
BstEII GGTNACC 1 cut(s) 16
BstF5I GGATG 1 cut(s) 366
BstH2I RGCGCY 1 cut(s) 1229
BstHHI GCGC 1 cut(s) 1228
BstKTI GATC 5 cut(s) 206, 542, 777, 901, 1368
BstMAI GTCTC 2 cut(s) 144, 1031
BstMBI GATC 5 cut(s) 203, 539, 774, 898, 1365
BstMWI GCNNNNNNNGC 4 cut(s) 324, 338, 967, 1105
BstNI CCWGG 3 cut(s) 13, 869, 1071
BstNSI RCATGY 1 cut(s) 469
BstPI GGTNACC 1 cut(s) 16
BstSCI CCNGG 4 cut(s) 11, 489, 867, 1069
BstSFI CTRYAG 1 cut(s) 1369
BstV1I GCAGC 2 cut(s) 159, 1192
BstZ17I GTATAC 1 cut(s) 473
BsuI GTATCC 1 cut(s) 1339
BsuRI GGCC 6 cut(s) 5, 413, 429, 701, 728, 764
BtgZI GCGATG 1 cut(s) 352
BtsCI GGATG 1 cut(s) 366
BtsIMutI CAGTG 2 cut(s) 267, 1208
BveI ACCTGC 1 cut(s) 241
Cac8I GCNNGC 2 cut(s) 72, 1101
CciI TCATGA 1 cut(s) 1081
CfoI GCGC 1 cut(s) 1228
Cfr13I GGNCC 1 cut(s) 257
CviAII CATG 6 cut(s) 230, 466, 595, 840, 896, 1082
DdeI CTNAG 5 cut(s) 141, 200, 270, 569, 1109
DpnI GATC 5 cut(s) 205, 541, 776, 900, 1367
DpnII GATC 5 cut(s) 203, 539, 774, 898, 1365
DraI TTTAAA 1 cut(s) 1008
DraIII CACNNNGTG 1 cut(s) 967
EaeI YGGCCR 3 cut(s) 3, 411, 699
Eam1104I CTCTTC 3 cut(s) 228, 459, 570
EarI CTCTTC 3 cut(s) 228, 459, 570
EciI GGCGGA 1 cut(s) 333
Ecl136II GAGCTC 1 cut(s) 616
Eco147I AGGCCT 1 cut(s) 429
Eco24I GRGCYC 1 cut(s) 618
Eco47I GGWCC 1 cut(s) 257
Eco53kI GAGCTC 1 cut(s) 616
Eco57I CTGAAG 2 cut(s) 203, 936
Eco91I GGTNACC 1 cut(s) 16
EcoICRI GAGCTC 1 cut(s) 616
EcoO65I GGTNACC 1 cut(s) 16
EcoRI GAATTC 1 cut(s) 385
EcoRII CCWGG 3 cut(s) 11, 867, 1069
EcoT22I ATGCAT 2 cut(s) 596, 1017
EcoT38I GRGCYC 1 cut(s) 618
FaeI CATG 6 cut(s) 233, 469, 598, 843, 899, 1085
FaqI GGGAC 2 cut(s) 123, 1237
FatI CATG 6 cut(s) 229, 465, 594, 839, 895, 1081
FauI CCCGC 1 cut(s) 975
FblI GTMKAC 1 cut(s) 472
Fnu4HI GCNGC 2 cut(s) 148, 1181
FokI GGATG 1 cut(s) 373
FriOI GRGCYC 1 cut(s) 618
Fsp4HI GCNGC 2 cut(s) 148, 1181
FspBI CTAG 3 cut(s) 672, 1100, 1298
GlaI GCGC 1 cut(s) 1227
GluI GCNGC 2 cut(s) 148, 1181
GsaI CCCAGC 1 cut(s) 536
HaeII RGCGCY 1 cut(s) 1229
HaeIII GGCC 6 cut(s) 5, 413, 429, 701, 728, 764
HapII CCGG 3 cut(s) 490, 791, 1184
HhaI GCGC 1 cut(s) 1228
Hin1II CATG 6 cut(s) 233, 469, 598, 843, 899, 1085
Hin6I GCGC 1 cut(s) 1226
HinP1I GCGC 1 cut(s) 1226
HindIII AAGCTT 2 cut(s) 68, 879
HinfI GANTC 2 cut(s) 334, 521
HpaII CCGG 3 cut(s) 490, 791, 1184
HphI GGTGA 4 cut(s) 10, 959, 1188, 1301
Hpy166II GTNNAC 2 cut(s) 473, 874
Hpy188I TCNGA 3 cut(s) 85, 222, 572
Hpy188III TCNNGA 3 cut(s) 791, 902, 1082
Hpy8I GTNNAC 2 cut(s) 473, 874
HpyAV CCTTC 3 cut(s) 688, 718, 972
HpyCH4III ACNGT 3 cut(s) 1042, 1150, 1212
HpyCH4V TGCA 7 cut(s) 62, 527, 594, 1015, 1021, 1056, 1180
HpyF10VI GCNNNNNNNGC 4 cut(s) 324, 338, 967, 1105
HpyF3I CTNAG 5 cut(s) 141, 200, 270, 569, 1109
Hsp92II CATG 6 cut(s) 233, 469, 598, 843, 899, 1085
HspAI GCGC 1 cut(s) 1226
Kpn2I TCCGGA 1 cut(s) 790
Kzo9I GATC 5 cut(s) 203, 539, 774, 898, 1365
LmnI GCTCC 3 cut(s) 96, 161, 399
Lsp1109I GCAGC 2 cut(s) 159, 1192
LweI GCATC 5 cut(s) 375, 509, 581, 1024, 1324
MaeI CTAG 3 cut(s) 672, 1100, 1298
MaeIII GTNAC 3 cut(s) 16, 461, 1194
MalI GATC 5 cut(s) 205, 541, 776, 900, 1367
MboI GATC 5 cut(s) 203, 539, 774, 898, 1365
MboII GAAGA 9 cut(s) 245, 446, 557, 703, 784, 929, 932, 1039, 1180
MfeI CAATTG 1 cut(s) 648
MhlI GDGCHC 1 cut(s) 618
MlsI TGGCCA 3 cut(s) 5, 413, 701
MluNI TGGCCA 3 cut(s) 5, 413, 701
MlyI GAGTC 1 cut(s) 328
MmeI TCCRAC 1 cut(s) 955
MnlI CCTC 7 cut(s) 265, 368, 440, 989, 1265, 1294, 1336
Mox20I TGGCCA 3 cut(s) 5, 413, 701
Mph1103I ATGCAT 2 cut(s) 596, 1017
MroI TCCGGA 1 cut(s) 790
MroXI GAANNNNTTC 3 cut(s) 130, 216, 237
MscI TGGCCA 3 cut(s) 5, 413, 701
MseI TTAA 5 cut(s) 711, 911, 936, 1007, 1329
MslI CAYNNNNRTG 1 cut(s) 1086
Msp20I TGGCCA 3 cut(s) 5, 413, 701
MspA1I CMGCKG 1 cut(s) 263
MspCI CTTAAG 1 cut(s) 935
MspI CCGG 3 cut(s) 490, 791, 1184
MspR9I CCNGG 4 cut(s) 13, 491, 869, 1071
MunI CAATTG 1 cut(s) 648
MvaI CCWGG 3 cut(s) 13, 869, 1071
MwoI GCNNNNNNNGC 4 cut(s) 324, 338, 967, 1105
NciI CCSGG 1 cut(s) 491
NdeII GATC 5 cut(s) 203, 539, 774, 898, 1365
NheI GCTAGC 1 cut(s) 1099
NlaIII CATG 6 cut(s) 233, 469, 598, 843, 899, 1085
NmeAIII GCCGAG 2 cut(s) 273, 1084
NmuCI GTSAC 3 cut(s) 16, 461, 1194
NsiI ATGCAT 2 cut(s) 596, 1017
NspI RCATGY 1 cut(s) 469
PagI TCATGA 1 cut(s) 1081
PceI AGGCCT 1 cut(s) 429
PciI ACATGT 1 cut(s) 465
PcsI WCGNNNNNNNCGW 1 cut(s) 751
PdmI GAANNNNTTC 3 cut(s) 130, 216, 237
PfeI GAWTC 1 cut(s) 521
PkrI GCNGC 2 cut(s) 149, 1182
PleI GAGTC 1 cut(s) 328
PpsI GAGTC 1 cut(s) 328
PscI ACATGT 1 cut(s) 465
Psp124BI GAGCTC 1 cut(s) 618
Psp6I CCWGG 3 cut(s) 11, 867, 1069
PspEI GGTNACC 1 cut(s) 16
PspFI CCCAGC 1 cut(s) 532
PspGI CCWGG 3 cut(s) 11, 867, 1069
PspPI GGNCC 1 cut(s) 257
PvuII CAGCTG 1 cut(s) 263
RseI CAYNNNNRTG 1 cut(s) 1086
SacI GAGCTC 1 cut(s) 618
SaqAI TTAA 5 cut(s) 711, 911, 936, 1007, 1329
SatI GCNGC 2 cut(s) 148, 1181
Sau3AI GATC 5 cut(s) 203, 539, 774, 898, 1365
Sau96I GGNCC 1 cut(s) 257
SchI GAGTC 1 cut(s) 328
ScrFI CCNGG 4 cut(s) 13, 491, 869, 1071
SduI GDGCHC 1 cut(s) 618
SfaNI GCATC 5 cut(s) 375, 509, 581, 1024, 1324
SfcI CTRYAG 1 cut(s) 1369
SinI GGWCC 1 cut(s) 257
SmiMI CAYNNNNRTG 1 cut(s) 1086
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
SpeI ACTAGT 1 cut(s) 671
SseBI AGGCCT 1 cut(s) 429
SsiI CCGC 4 cut(s) 318, 397, 640, 982
SspMI CTAG 3 cut(s) 672, 1100, 1298
SstI GAGCTC 1 cut(s) 618
StuI AGGCCT 1 cut(s) 429
StyD4I CCNGG 4 cut(s) 11, 489, 867, 1069
TaaI ACNGT 3 cut(s) 1042, 1150, 1212
TaqI TCGA 3 cut(s) 538, 1230, 1257
TfiI GAWTC 1 cut(s) 521
Tru1I TTAA 5 cut(s) 711, 911, 936, 1007, 1329
Tru9I TTAA 5 cut(s) 711, 911, 936, 1007, 1329
TscAI CASTG 2 cut(s) 274, 1215
TseFI GTSAC 3 cut(s) 16, 461, 1194
TseI GCWGC 2 cut(s) 147, 1180
Tsp45I GTSAC 3 cut(s) 16, 461, 1194
TspDTI ATGAA 6 cut(s) 246, 496, 681, 753, 1070, 1098
TspRI CASTG 2 cut(s) 274, 1215
Vha464I CTTAAG 1 cut(s) 935
VpaK11BI GGWCC 1 cut(s) 257
XapI RAATTY 5 cut(s) 52, 385, 574, 863, 906
XceI RCATGY 1 cut(s) 469
XmiI GTMKAC 1 cut(s) 472
XmnI GAANNNNTTC 3 cut(s) 130, 216, 237
XspI CTAG 3 cut(s) 672, 1100, 1298
Zsp2I ATGCAT 2 cut(s) 596, 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.