Rmu_sc0001663.1_g000003

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001663.1
OG0011520
Physical Location & Seq
Forward (+)
19132 .. 24705
5574 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3189 bp
atgctcctatcactcatcgttgtcgtcgcagatcttctctgtctcattaaaagcaccgagaattgggctatggaattgggcctggagcaccgaatcatcgtcttgtcccccaaatcaaggggtgttgtggcgaatcatggcagcaactcaataagtttcatctggtgggatttgcctctcgctttcattgcctcttatactatggatcctggaaccgcagctaccatcttgagctgtttatgtcccataaacgttttacaagaaacaacagcgcagcgttgcagctatcttaacaagaatccaaaagagaagatagaagagttgagatcaaaaatcgaagaattaagggcactctttgaagatgtgaatagaaaactaaagcatgcatgtattcaagaaaggaaagctcccacagctcaagtgaaactgtggttggaaaatgttcaaaagtttgacaataacgagcggcgcgatctactttcccaggaagagaagagatgcttatgtagatatcttccaaattatgcctctcgcagaaagttggggaaacttgttgaaaagactattaagatggttgatgagcttcttaggaagggacagttaattaaagatgattcattgacttatttgctggtagagaacgtaaaggcgcttccaacgacagtaatagtgagcaatgaatcaactaaaagaacgataggagaaatctggcgccatctgacagcagaccatgaagtgaaaaagattggtgtttacggcattggtggcgttggaaaaacaacaattatgaaagaaataaataaccaactcaaaagagagatggaggaaaagaagatcacttgttttgacaatgtgatctggatcacaatgcctaagagttcaaattccgaaaaattgcagaagaccattgcaaaatctgtgagcttgcatctccttgatcattgggatacaatggaaaacgcagcagccttactggaagccttaacacggaggaagaaacttttgctgatttttgatgatgtttggactggattttctttagaaaatgttggaattcctgaaccaaccagagaaaatggctgcaagttcatattaactactagatcgttaagggtgtgccgagccatggagacagacaaagaagtggaggtaaagatgctttctgaggatgaaacatggagccttttcactgaaaaagttggttctactgttcttcagaaaacagaaatttatgttcttgcaaggaaagtagcgaaagaatttggtggtcttccactagccattgtcacagtcggaagagccttgagaaaagtagagaacgaaatggggtggcagaatgcattgactgcattaagagagtctgcagctaatgtggaaggcatggaagagatggtgttttcatgtttgagattcagttatgaaagattagatgatgacattgtccgatcatgtttcctatattgtgccttgtatcctgaaggtcatcatattgaagcaaaagagttaattgaaaattggttgtgggagggtttgctcggtgatgtaggaagactacaagctaatatatggaagggacaaatgattttggctaatcttaaggattcttgtctgctagatcatgttaacgcagagagtggcattgaatgtgtcaaaatgcacgacttaattagggacatggcaattgatattacaagaaaaagtagtcatgtttgccttatcagagctgggattgcagtagaaaggatccaaattcaaagtgaggagattgaagacgtgaagaggatatccatgatgtataatgatttgatatgtcttcctaagaatctatcttgtcccaagttatcctctttgctgctgcagtattgctccgcggacaaagtaactgatctttgttttaccggaatgcagaatcttaaagtacttgacttgtctttcactggaatttcctgtctgtctgagtccattgccaacttgaggaatttgcgtgccttgctattgcgtagttgttggaacctaacaaggctgccttctctagaattgctcgaggctctgtgggatttggatctgtcttatactcccatcagaagcttgccatttggaatggaaatgttacgtcaccttaagcgcctgaatctttcttatacagaattggactcgtttccagaaggactactaaccactctcaattttctagaagaattgcttttgtttggttctcaatgtgcgtttggattagaacttgtcaatgaactcatcgcctgcataaacatcgttgttcttgaagtgcaattccagggctcagaagtgtttaatatttatacaagatccgggcattggaataatctacagagtttcagatttgacatatgctcattcttttaccacaatattggagcaataaggaagcacgttgaaaggagcaagagtataacctgcataggaagtttctttgtgaatggtactcgtcttttgctccctgattgcacttctgagctgcaactcaggcgctgcaatgatgttgatatattgtcaagatgcttatcagattccatccagttgaaaaaatgtgctgtcagatactgtaatcaaatggagagtatagtaacgactgcggagaacaacttgagcagtctaaattcgttaaagctgtattctctaacaaatctgaagatgctctgcaggggtgttgtccctctaggaactttcggtgaccttatgatcttgcaaatcagttgttgtcattctattgagactctattcactgtaacgctgattgaacagctcggaaaccttgaagaactcactatcagatattgtttaagattgaaggtgctgatacaggaagaagggtcaatccagagagctgaagtcagccttccaagacttaagaatctggaattgtatacgttgttggaactgaagagcatttatagtgaagacttgatttgcaattctttgagcacaattactgttcagaaatgtccaggtctaaagaagctacctatcaccatatcgacagatcaaggagatccacagcgacaaccatcaaccactccaccaatcaaagaaatcatagcagagagatggtggtgggattcagtagaattggctaatcccgatgcaaaaaccatcctctggcctagactggtagagcctacaatgatgtacttggaactggatgaactctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_4 LRR_8 NB-ARC

Protein Analysis

1062

Amino Acids

121.06

Weight (kDa)

6.13

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 231 - 402 5.8e-40 NB-ARC domain
WHD_DRP PF23559 490 - 560 1.1e-07 Disease resistance protein Winged helix domain
LRR_8 PF13855 612 - 669 2.4e-08 Leucine rich repeat
LRR_14 PF23598 632 - 767 1.8e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 831 - 939 1.3e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 880 - 1000 8e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2441
AccB1I GGYRCC 1 cut(s) 711
AccB7I CCANNNNNTGG 1 cut(s) 3135
AccBSI CCGCTC 1 cut(s) 466
AccI GTMKAC 1 cut(s) 2903
AccII CGCG 2 cut(s) 471, 1871
AciI CCGC 5 cut(s) 216, 466, 1869, 1871, 2612
AclI AACGTT 1 cut(s) 252
AclWI GGATC 8 cut(s) 200, 213, 869, 1738, 1751, 2070, 2319, 3023
AcsI RAATTY 8 cut(s) 883, 1053, 1227, 1259, 1749, 1941, 1978, 2635
AcuI CTGAAG 5 cut(s) 1199, 1497, 2687, 2886, 2939
AcyI GRCGYC 1 cut(s) 712
AfaI GTAC 3 cut(s) 1920, 2461, 3167
AfiI CCNNNNNNNGG 7 cut(s) 63, 117, 987, 1126, 1974, 2334, 3135
AflII CTTAAG 3 cut(s) 1595, 2120, 2885
AjiI CACGTC 1 cut(s) 1774
AjnI CCWGG 5 cut(s) 81, 208, 483, 2292, 2983
AjuI GAANNNNNNNTTGG 2 cut(s) 416, 448
Alw21I GWGCWC 2 cut(s) 90, 2963
Alw26I GTCTC 3 cut(s) 47, 1124, 2744
AlwI GGATC 8 cut(s) 200, 213, 869, 1738, 1751, 2070, 2319, 3023
AlwNI CAGNNNCTG 2 cut(s) 2508, 2580
Ama87I CYCGRG 1 cut(s) 2042
AoxI GGCC 2 cut(s) 79, 3137
ApoI RAATTY 8 cut(s) 883, 1053, 1227, 1259, 1749, 1941, 1978, 2635
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 6 cut(s) 274, 471, 652, 714, 2127, 2508
AspS9I GGNCC 1 cut(s) 79
AsuC2I CCSGG 1 cut(s) 2329
AsuHPI GGTGA 4 cut(s) 1550, 2108, 2720, 2998
AvaI CYCGRG 1 cut(s) 2042
BaeGI GKGCMC 1 cut(s) 352
BamHI GGATCC 2 cut(s) 205, 1743
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 1 cut(s) 2300
BarI GAAGNNNNNNTAC 2 cut(s) 636, 668
BbsI GAAGAC 6 cut(s) 908, 1262, 1555, 1776, 1805, 2943
Bbv12I GWGCWC 2 cut(s) 90, 2963
BceAI ACGGC 1 cut(s) 772
BcgI CGANNNNNNTGC 2 cut(s) 2251, 2285
BciT130I CCWGG 5 cut(s) 83, 210, 485, 2294, 2985
BciVI GTATCC 2 cut(s) 940, 1482
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 1 cut(s) 2329
BcoDI GTCTC 3 cut(s) 47, 1124, 2744
BfaI CTAG 7 cut(s) 1101, 1277, 1613, 2033, 2192, 2696, 3141
BfmI CTRYAG 4 cut(s) 1362, 1856, 2345, 2677
BfoI RGCGCY 4 cut(s) 653, 715, 2128, 2509
BfrI CTTAAG 3 cut(s) 1595, 2120, 2885
BfuAI ACCTGC 1 cut(s) 2441
BfuI GTATCC 2 cut(s) 940, 1482
BglII AGATCT 1 cut(s) 31
BmcAI AGTACT 1 cut(s) 1920
Bme1390I CCNGG 6 cut(s) 83, 210, 485, 2294, 2329, 2985
BmeT110I CYCGRG 1 cut(s) 2042
BmgBI CACGTC 1 cut(s) 1774
BmgT120I GGNCC 1 cut(s) 79
BmiI GGNNCC 6 cut(s) 207, 214, 713, 1181, 1745, 2012
BmrFI CCNGG 6 cut(s) 83, 210, 485, 2294, 2329, 2985
BmsI GCATC 6 cut(s) 488, 937, 1146, 2525, 2661, 3109
BpiI GAAGAC 6 cut(s) 908, 1262, 1555, 1776, 1805, 2943
BpmI CTGGAG 1 cut(s) 104
BpuEI CTTGAG 5 cut(s) 250, 402, 1324, 1993, 2644
BpuMI CCSGG 1 cut(s) 2329
BsaBI GATNNNNATC 3 cut(s) 860, 2061, 2539
BsaHI GRCGYC 1 cut(s) 712
BsaJI CCNNGG 4 cut(s) 483, 1125, 1869, 2293
BsaWI WCCGGW 1 cut(s) 1898
BsaXI ACNNNNNCTCC 2 cut(s) 2410, 2440
Bsc4I CCNNNNNNNGG 7 cut(s) 63, 117, 987, 1126, 1974, 2334, 3135
Bse1I ACTGG 6 cut(s) 978, 1033, 1942, 2554, 3150, 3180
Bse3DI GCAATG 5 cut(s) 186, 682, 906, 1962, 2518
Bse8I GATNNNNATC 3 cut(s) 860, 2061, 2539
BseBI CCWGG 5 cut(s) 83, 210, 485, 2294, 2985
BseDI CCNNGG 4 cut(s) 483, 1125, 1869, 2293
BseGI GGATG 4 cut(s) 1174, 2550, 3129, 3184
BseJI GATNNNNATC 3 cut(s) 860, 2061, 2539
BseLI CCNNNNNNNGG 7 cut(s) 63, 117, 987, 1126, 1974, 2334, 3135
BseMI GCAATG 5 cut(s) 186, 682, 906, 1962, 2518
BseMII CTCAG 5 cut(s) 1155, 1947, 2313, 2481, 2515
BseNI ACTGG 6 cut(s) 978, 1033, 1942, 2554, 3150, 3180
BseRI GAGGAG 1 cut(s) 1775
BseSI GKGCMC 1 cut(s) 352
BseYI CCCAGC 1 cut(s) 1724
Bsh1236I CGCG 2 cut(s) 471, 1871
BshFI GGCC 2 cut(s) 81, 3139
BshNI GGYRCC 1 cut(s) 711
BsiHKAI GWGCWC 2 cut(s) 90, 2963
BsiHKCI CYCGRG 1 cut(s) 2042
BsiSI CCGG 2 cut(s) 1899, 2328
BslFI GGGAC 7 cut(s) 91, 228, 609, 1587, 1685, 1818, 2675
BslI CCNNNNNNNGG 7 cut(s) 63, 117, 987, 1126, 1974, 2334, 3135
BsmAI GTCTC 3 cut(s) 47, 1124, 2744
BsmFI GGGAC 7 cut(s) 91, 228, 609, 1587, 1685, 1818, 2675
BsmI GAATGC 2 cut(s) 1342, 1908
BsnI GGCC 2 cut(s) 81, 3139
BsoBI CYCGRG 1 cut(s) 2042
Bsp1286I GDGCHC 4 cut(s) 90, 352, 2300, 2963
Bsp19I CCATGG 1 cut(s) 1125
BspACI CCGC 5 cut(s) 216, 466, 1869, 1871, 2612
BspANI GGCC 2 cut(s) 81, 3139
BspCNI CTCAG 5 cut(s) 1156, 1948, 2312, 2482, 2514
BspFNI CGCG 2 cut(s) 471, 1871
BspLI GGNNCC 6 cut(s) 207, 214, 713, 1181, 1745, 2012
BspMAI CTGCAG 3 cut(s) 1366, 1860, 2681
BspMI ACCTGC 1 cut(s) 2441
BspPI GGATC 8 cut(s) 200, 213, 869, 1738, 1751, 2070, 2319, 3023
BspQI GCTCTTC 2 cut(s) 1291, 2915
BspT107I GGYRCC 1 cut(s) 711
BspTI CTTAAG 3 cut(s) 1595, 2120, 2885
BsrBI CCGCTC 1 cut(s) 466
BsrDI GCAATG 5 cut(s) 186, 682, 906, 1962, 2518
BsrI ACTGG 6 cut(s) 978, 1033, 1942, 2554, 3150, 3180
BssECI CCNNGG 4 cut(s) 483, 1125, 1869, 2293
BssNAI GTATAC 1 cut(s) 2904
BssNI GRCGYC 1 cut(s) 712
BssT1I CCWWGG 1 cut(s) 1125
Bst1107I GTATAC 1 cut(s) 2904
Bst2UI CCWGG 5 cut(s) 83, 210, 485, 2294, 2985
Bst4CI ACNGT 8 cut(s) 429, 600, 664, 1210, 1291, 2582, 2764, 2971
Bst6I CTCTTC 7 cut(s) 312, 483, 488, 1291, 1380, 1772, 2915
BstACI GRCGYC 1 cut(s) 712
BstAFI CTTAAG 3 cut(s) 1595, 2120, 2885
BstAPI GCANNNNNTGC 1 cut(s) 1346
BstC8I GCNNGC 5 cut(s) 384, 926, 1986, 2090, 2260
BstDEI CTNAG 8 cut(s) 587, 873, 1164, 1818, 1956, 2299, 2490, 2501
BstDSI CCRYGG 2 cut(s) 1125, 1869
BstEII GGTNACC 1 cut(s) 2708
BstF5I GGATG 4 cut(s) 1174, 2550, 3129, 3184
BstFNI CGCG 2 cut(s) 471, 1871
BstH2I RGCGCY 4 cut(s) 653, 715, 2128, 2509
BstHHI GCGC 6 cut(s) 274, 471, 652, 714, 2127, 2508
BstMAI GTCTC 3 cut(s) 47, 1124, 2744
BstMWI GCNNNNNNNGC 7 cut(s) 188, 413, 765, 1346, 1730, 1990, 2503
BstNI CCWGG 5 cut(s) 83, 210, 485, 2294, 2985
BstNSI RCATGY 2 cut(s) 386, 390
BstPI GGTNACC 1 cut(s) 2708
BstSCI CCNGG 6 cut(s) 81, 208, 483, 2292, 2327, 2983
BstSFI CTRYAG 4 cut(s) 1362, 1856, 2345, 2677
BstSLI GKGCMC 1 cut(s) 352
BstUI CGCG 2 cut(s) 471, 1871
BstV2I GAAGAC 6 cut(s) 908, 1262, 1555, 1776, 1805, 2943
BstX2I RGATCY 6 cut(s) 31, 205, 1743, 2062, 2324, 3028
BstXI CCANNNNNNTGG 1 cut(s) 2390
BstYI RGATCY 6 cut(s) 31, 205, 1743, 2062, 2324, 3028
BstZ17I GTATAC 1 cut(s) 2904
BsuI GTATCC 2 cut(s) 940, 1482
BsuRI GGCC 2 cut(s) 81, 3139
BtgI CCRYGG 2 cut(s) 1125, 1869
BtgZI GCGATG 1 cut(s) 2239
BtrI CACGTC 1 cut(s) 1774
BtsCI GGATG 4 cut(s) 1174, 2550, 3129, 3184
BtsIMutI CAGTG 3 cut(s) 1188, 1935, 2760
BveI ACCTGC 1 cut(s) 2441
Cac8I GCNNGC 5 cut(s) 384, 926, 1986, 2090, 2260
CaiI CAGNNNCTG 2 cut(s) 2508, 2580
CfoI GCGC 6 cut(s) 274, 471, 652, 714, 2127, 2508
Cfr13I GGNCC 1 cut(s) 79
Cfr42I CCGCGG 1 cut(s) 1872
Csp6I GTAC 3 cut(s) 1919, 2460, 3166
CviQI GTAC 3 cut(s) 1919, 2460, 3166
DdeI CTNAG 8 cut(s) 587, 873, 1164, 1818, 1956, 2299, 2490, 2501
DinI GGCGCC 1 cut(s) 713
Eam1104I CTCTTC 7 cut(s) 312, 483, 488, 1291, 1380, 1772, 2915
EarI CTCTTC 7 cut(s) 312, 483, 488, 1291, 1380, 1772, 2915
Eco130I CCWWGG 1 cut(s) 1125
Eco24I GRGCYC 1 cut(s) 2300
Eco32I GATATC 2 cut(s) 512, 1785
Eco57I CTGAAG 5 cut(s) 1199, 1497, 2687, 2886, 2939
Eco88I CYCGRG 1 cut(s) 2042
Eco91I GGTNACC 1 cut(s) 2708
EcoO65I GGTNACC 1 cut(s) 2708
EcoRI GAATTC 1 cut(s) 1053
EcoRII CCWGG 5 cut(s) 81, 208, 483, 2292, 2983
EcoRV GATATC 2 cut(s) 512, 1785
EcoT14I CCWWGG 1 cut(s) 1125
EcoT22I ATGCAT 2 cut(s) 388, 1342
EcoT38I GRGCYC 1 cut(s) 2300
EgeI GGCGCC 1 cut(s) 713
EheI GGCGCC 1 cut(s) 713
ErhI CCWWGG 1 cut(s) 1125
FalI AAGNNNNNCTT 8 cut(s) 485, 517, 2011, 2043, 2187, 2219, 2859, 2891
FaqI GGGAC 7 cut(s) 91, 228, 609, 1587, 1685, 1818, 2675
FauNDI CATATG 1 cut(s) 2366
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 1 cut(s) 2903
FokI GGATG 3 cut(s) 1181, 2537, 3116
FriOI GRGCYC 1 cut(s) 2300
FspBI CTAG 7 cut(s) 1101, 1277, 1613, 2033, 2192, 2696, 3141
GlaI GCGC 6 cut(s) 273, 470, 651, 713, 2126, 2507
GsaI CCCAGC 1 cut(s) 1728
GsuI CTGGAG 1 cut(s) 104
HaeII RGCGCY 4 cut(s) 653, 715, 2128, 2509
HaeIII GGCC 2 cut(s) 81, 3139
HapII CCGG 2 cut(s) 1899, 2328
HhaI GCGC 6 cut(s) 274, 471, 652, 714, 2127, 2508
Hin1I GRCGYC 1 cut(s) 712
Hin6I GCGC 6 cut(s) 272, 469, 650, 712, 2125, 2506
HinP1I GCGC 6 cut(s) 272, 469, 650, 712, 2125, 2506
HincII GTYRAC 1 cut(s) 1624
HindII GTYRAC 1 cut(s) 1624
HindIII AAGCTT 1 cut(s) 2086
HpaI GTTAAC 1 cut(s) 1624
HpaII CCGG 2 cut(s) 1899, 2328
HphI GGTGA 4 cut(s) 1550, 2108, 2720, 2998
Hpy166II GTNNAC 3 cut(s) 754, 1624, 2904
Hpy8I GTNNAC 3 cut(s) 754, 1624, 2904
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 9 cut(s) 586, 1370, 1472, 1564, 2037, 2159, 2821, 2840, 2885
HpyCH4III ACNGT 8 cut(s) 429, 600, 664, 1210, 1291, 2582, 2764, 2971
HpyCH4IV ACGT 6 cut(s) 252, 642, 1773, 2113, 2409, 2906
HpyF10VI GCNNNNNNNGC 7 cut(s) 188, 413, 765, 1346, 1730, 1990, 2503
HpyF3I CTNAG 8 cut(s) 587, 873, 1164, 1818, 1956, 2299, 2490, 2501
HpySE526I ACGT 6 cut(s) 252, 642, 1773, 2113, 2409, 2906
Hsp92I GRCGYC 1 cut(s) 712
HspAI GCGC 6 cut(s) 272, 469, 650, 712, 2125, 2506
KasI GGCGCC 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 937
KspAI GTTAAC 1 cut(s) 1624
KspI CCGCGG 1 cut(s) 1872
LguI GCTCTTC 2 cut(s) 1291, 2915
LmnI GCTCC 8 cut(s) 9, 85, 412, 1179, 1871, 2393, 2418, 2478
LweI GCATC 6 cut(s) 488, 937, 1146, 2525, 2661, 3109
MaeI CTAG 7 cut(s) 1101, 1277, 1613, 2033, 2192, 2696, 3141
MaeII ACGT 6 cut(s) 252, 642, 1773, 2113, 2409, 2906
MaeIII GTNAC 7 cut(s) 1285, 1879, 2109, 2114, 2602, 2708, 2764
MbiI CCGCTC 1 cut(s) 466
MfeI CAATTG 1 cut(s) 1680
MflI RGATCY 6 cut(s) 31, 205, 1743, 2062, 2324, 3028
MhlI GDGCHC 4 cut(s) 90, 352, 2300, 2963
Mly113I GGCGCC 1 cut(s) 712
MlyI GAGTC 4 cut(s) 1367, 1967, 2147, 2746
MmeI TCCRAC 7 cut(s) 414, 680, 751, 1030, 1273, 1988, 2892
Mph1103I ATGCAT 2 cut(s) 388, 1342
MroXI GAANNNNTTC 1 cut(s) 441
MspA1I CMGCKG 1 cut(s) 1871
MspCI CTTAAG 3 cut(s) 1595, 2120, 2885
MspI CCGG 2 cut(s) 1899, 2328
MspR9I CCNGG 6 cut(s) 83, 210, 485, 2294, 2329, 2985
MunI CAATTG 1 cut(s) 1680
Mva1269I GAATGC 2 cut(s) 1342, 1908
MvaI CCWGG 5 cut(s) 83, 210, 485, 2294, 2985
MvnI CGCG 2 cut(s) 471, 1871
MwoI GCNNNNNNNGC 7 cut(s) 188, 413, 765, 1346, 1730, 1990, 2503
NarI GGCGCC 1 cut(s) 712
NciI CCSGG 1 cut(s) 2329
NcoI CCATGG 1 cut(s) 1125
NdeI CATATG 1 cut(s) 2366
NlaIV GGNNCC 6 cut(s) 207, 214, 713, 1181, 1745, 2012
NmeAIII GCCGAG 1 cut(s) 1145
NmuCI GTSAC 3 cut(s) 1285, 2114, 2708
NsiI ATGCAT 2 cut(s) 388, 1342
NspI RCATGY 2 cut(s) 386, 390
PacI TTAATTAA 1 cut(s) 606
PaeI GCATGC 1 cut(s) 386
PaeR7I CTCGAG 1 cut(s) 2042
PciSI GCTCTTC 2 cut(s) 1291, 2915
PcsI WCGNNNNNNNCGW 1 cut(s) 468
PctI GAATGC 2 cut(s) 1342, 1908
PdmI GAANNNNTTC 1 cut(s) 441
PflFI GACNNNGTC 1 cut(s) 1439
PflMI CCANNNNNTGG 1 cut(s) 3135
PfoI TCCNGGA 1 cut(s) 208
PleI GAGTC 4 cut(s) 1366, 1966, 2147, 2746
PluTI GGCGCC 1 cut(s) 715
PpsI GAGTC 4 cut(s) 1366, 1966, 2147, 2746
Psp1406I AACGTT 1 cut(s) 252
Psp6I CCWGG 5 cut(s) 81, 208, 483, 2292, 2983
PspEI GGTNACC 1 cut(s) 2708
PspFI CCCAGC 1 cut(s) 1724
PspGI CCWGG 5 cut(s) 81, 208, 483, 2292, 2983
PspN4I GGNNCC 6 cut(s) 207, 214, 713, 1181, 1745, 2012
PspPI GGNCC 1 cut(s) 79
PspXI VCTCGAGB 1 cut(s) 2042
PsrI GAACNNNNNNTAC 2 cut(s) 205, 237
PstI CTGCAG 3 cut(s) 1366, 1860, 2681
PstNI CAGNNNCTG 2 cut(s) 2508, 2580
PsuI RGATCY 6 cut(s) 31, 205, 1743, 2062, 2324, 3028
PsyI GACNNNGTC 1 cut(s) 1439
RsaI GTAC 3 cut(s) 1920, 2461, 3167
RsaNI GTAC 3 cut(s) 1919, 2460, 3166
SacII CCGCGG 1 cut(s) 1872
SapI GCTCTTC 2 cut(s) 1291, 2915
Sau96I GGNCC 1 cut(s) 79
ScaI AGTACT 1 cut(s) 1920
SchI GAGTC 4 cut(s) 1367, 1967, 2147, 2746
ScrFI CCNGG 6 cut(s) 83, 210, 485, 2294, 2329, 2985
SduI GDGCHC 4 cut(s) 90, 352, 2300, 2963
SfaNI GCATC 6 cut(s) 488, 937, 1146, 2525, 2661, 3109
SfcI CTRYAG 4 cut(s) 1362, 1856, 2345, 2677
SfoI GGCGCC 1 cut(s) 713
Sfr274I CTCGAG 1 cut(s) 2042
Sfr303I CCGCGG 1 cut(s) 1872
SgrBI CCGCGG 1 cut(s) 1872
SlaI CTCGAG 1 cut(s) 2042
SmlI CTYRAG 9 cut(s) 229, 417, 1303, 1595, 1972, 2042, 2120, 2623, 2885
SmoI CTYRAG 9 cut(s) 229, 417, 1303, 1595, 1972, 2042, 2120, 2623, 2885
SphI GCATGC 1 cut(s) 386
SsiI CCGC 5 cut(s) 216, 466, 1869, 1871, 2612
SspDI GGCGCC 1 cut(s) 711
SspI AATATT 2 cut(s) 2314, 2389
SspMI CTAG 7 cut(s) 1101, 1277, 1613, 2033, 2192, 2696, 3141
StyD4I CCNGG 6 cut(s) 81, 208, 483, 2292, 2327, 2983
StyI CCWWGG 1 cut(s) 1125
TaaI ACNGT 8 cut(s) 429, 600, 664, 1210, 1291, 2582, 2764, 2971
TaiI ACGT 6 cut(s) 255, 645, 1776, 2116, 2412, 2909
TaqI TCGA 3 cut(s) 336, 2043, 3014
TatI WGTACW 2 cut(s) 1918, 3165
TauI GCSGC 1 cut(s) 469
TscAI CASTG 3 cut(s) 1195, 1942, 2767
TseFI GTSAC 3 cut(s) 1285, 2114, 2708
Tsp45I GTSAC 3 cut(s) 1285, 2114, 2708
TspGWI ACGGA 1 cut(s) 1003
TspRI CASTG 3 cut(s) 1195, 1942, 2767
Tth111I GACNNNGTC 1 cut(s) 1439
Van91I CCANNNNNTGG 1 cut(s) 3135
Vha464I CTTAAG 3 cut(s) 1595, 2120, 2885
XapI RAATTY 8 cut(s) 883, 1053, 1227, 1259, 1749, 1941, 1978, 2635
XbaI TCTAGA 2 cut(s) 2032, 2191
XceI RCATGY 2 cut(s) 386, 390
XhoI CTCGAG 1 cut(s) 2042
XmiI GTMKAC 1 cut(s) 2903
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 7 cut(s) 1101, 1277, 1613, 2033, 2192, 2696, 3141
ZrmI AGTACT 1 cut(s) 1920
Zsp2I ATGCAT 2 cut(s) 388, 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.