Rw6G008520

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0011520
Physical Location & Seq
Forward (+)
14388346 .. 14393842
5497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008520.1

Sequence Viewer

Length: 2724 bp
ATGGAATTGGGCCTGGAGCACCGAATCATCATCTTGTCCCCCAAATCAAGGGATGTTGTGGCGAATCATGGCAGCAACTCAATAAGTTTCATATGGTGGGATTTGCCTCTCGCTTTCATTGCCTCTTATACTATGGATCCTGGAACCGCAGCTACCATCTTGAGCTGTTTATGTCCCATAAACGCGCTTCCAACGACAGTAATAGTGAGCAATGAATCAACTAAAAGAACGATAGGAGAAATCTGGCGCCATCTGACAGCAGACCATGAAGTGAAAAAGATTGGTGTTTACGGCATCGGTGGCGTTGGAAAAACAACAATTATGAAAGAAATAAATAACCAACTCAAAAGAGAGATGGAGGAAAAGAAGATCACTTGTTTTGACAATGTGATCTGGATCACAATGCCTAAGAGTTCAAATTCCGAAAAATTGCAGAAGACCATTGCAAAATCTGTGAGCTTGCATCTCCTTGATCATTGGGATACAATGGAAAACGCAGCAGCCTTACTGGAAGCCTTAACACGGAGGAAGAAACTTTTGCTGATTTTTGATGATGTTTGGACTGGATTTTCTTTAGAAAATGTTGGAATTCCTGAACCAACCAGAGAAAATGGCTGCAAGTTCATATTAACTACTAGATCGTTAAGGGTGTGCCGAGCCATGGAGACAGACAAAGAAGTGGAGGTAAAGATGCTTTCTGAGGATGAAACATGGAGCCTTTTCACTGAAAAAGTTGGTTCTACTGTTCTGCAGAAAACAGAAATTTATGTTCTTGCAAGGAAAGTAGCGAAAGAATTTGGTGGTCTTCCACTAGCCATTGTCACAGTCGGAAGAGCCTTGAGAAAAGTAGAAAACGAAATGGGGTGGCAGAATGCATTGACTGCATTAAGAGAGTCTGCAGCTAATGTGGAAGGCATGGAAGAGATGGTGTTTTCATGTTTGAGATTCAGTTATGAAAGATTAGATGATGACATTGTCCGATCATGTTTCCTATATTGTGCCTTGTATCCTGAAGGTCATCATATTGAAGCAAAAGAGTTAATTGAAAATTGGTTGTGGGAGGGTTTGCTCGGTGATGTAGGAAGACTACAAGCTAATATATGGAAGGGACAAATGATTTTGGCTAATCTTAAGGATTCTTGTCTGCTAGATCATGTTAACGCAGAGAGTGGCATTGAATGTGTCAAAATGCACGACTTAATTAGGGACATGGCAATTGATATTACAAGAAAAAGTAGTCATGTTTGCCTTATCAGAGCTGGGATTGCAGTAGAAAGGATCCAAATTCAAAGTGAGGAGATTGAAGACGTGAAGAGGATATCCATGATGTACAATGATTTGATATGTCTTCCTAAGAATCTATCTTGTCCCAAGTTATCCTCTTTGCTACTGCAGTATTGCTCCGCGGACAAAGTAACTGATCTTTGTTTTACCGGAATGCAGAATCTTAAAGTACTTGACTTGTCTTTCACTGGAATTTCCTGTCTGTCTGAGTCCATTGCCAACTTGAGGAATTTGCGTGCCTTGCTATTGCGTAGTTGTTGGAACCTAACAAGGCTGCCTTCTCTAGAATTGCTCGAGGCTCTGTGGGATTTGGATCTATCTTATACTCCCATCAGAAGCTTGCCATTTGGAATGGAAATGTTACGTCACCTTAAGCGCCTGAATCTTTCTTATACAGAATTGGACTCGTTTCCAGAAGGACTACTAACCACTCTCAATTTTCTAGAAGAATTGCTTTTGTTTGGTTCTCAATGTGCGTTTGGATTAGAACTTGTCAATGAACTCATCGCCTGCATAAACATCGTTGTTCTTGAAGTGCAATTCCAGGGCTCAGAAGTGTTTAATATTTATACAAGATCCGGGCATTGGAATAATCTACAGAGTTTCAGATTTGACATATGCTCATTCTTTTACCACAATATTGGAGCAATAAGGAAGCACGTTGAAAGGAGCAAGAGTATAACCTGCATAGGAAGTTTCTTTGTGAATGGTACTCGTCTTTTGCTCCCTGATTGCACTTCTGAGCTGCAACTCAGGCGCTGCAATGATGTTGATATATTGTCAAGATGCTTATCAGATTCCATCCAGTTGAAAAAATGTGCTGTCAGATACTGTAATCAAATGGAGAGTATAGTAACGACTGCGGAGAACAACTTGAGCAGTCTAAATTCGTTAAAGCTGTATTCTCTAACAAATCTGAAGATGCTCTGCAGGGGTGTTGTCCCTCTAGGAACTTTCGGTGACCTTATGATCTTGCAAATCAGTTGTTGTCATTCTATTGAGACTCTATTCACTGTAACGCTGATTGAACAGCTCGGAAACCTTGAAGAACTCACTATCAGATATTGTTTAAGATTGAAGGTGCTGATACAGGAAGAAGGGTCAATCCAGAGAGCTGAAGTCAGCCTTCCAAGACTTAAGAATCTGGAATTGTATACGTTGTTGGAACTGAAGAGCATTTATAGTGAAGACATGATTTGCAATTCTTTGAGCACAATTACTGTTCAGAAATGTCCAGGTCTAAAGAAGCTACCTATCACCATATCGACAGATCAAGGAGATCCACAGCGACAACCATCAACCACTCCACCAATCAAAGAAATCATAGCAGAGAGATGGTGGTGGGATTCAGTAGAATTGGCTAATCCCGATGCAAAAACCATCCTCTGGCCTAGACTGGTAGAGCCTACAATGATGTACTTGGAACTGGATGAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_4 LRR_8 NB-ARC

Protein Analysis

907

Amino Acids

102.92

Weight (kDa)

5.61

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 76 - 247 4.5e-40 NB-ARC domain
WHD_DRP PF23559 335 - 405 9.1e-08 Disease resistance protein Winged helix domain
LRR_8 PF13855 457 - 514 2e-08 Leucine rich repeat
LRR_14 PF23598 477 - 611 1.5e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 676 - 784 1.1e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 738 - 845 2.9e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1976
AccB1I GGYRCC 1 cut(s) 246
AccB7I CCANNNNNTGG 1 cut(s) 2670
AccI GTMKAC 1 cut(s) 2438
AccII CGCG 2 cut(s) 185, 1406
AciI CCGC 4 cut(s) 147, 1404, 1406, 2147
AclWI GGATC 8 cut(s) 131, 144, 404, 1273, 1286, 1605, 1854, 2558
AcsI RAATTY 8 cut(s) 418, 588, 762, 794, 1284, 1476, 1513, 2170
AcuI CTGAAG 4 cut(s) 1032, 2222, 2421, 2474
AcyI GRCGYC 1 cut(s) 247
AfaI GTAC 4 cut(s) 1331, 1455, 1996, 2702
AfiI CCNNNNNNNGG 6 cut(s) 48, 522, 661, 1509, 1869, 2670
AflII CTTAAG 3 cut(s) 1130, 1655, 2420
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 4 cut(s) 12, 139, 1827, 2518
Alw21I GWGCWC 2 cut(s) 21, 2498
Alw26I GTCTC 2 cut(s) 659, 2279
AlwI GGATC 8 cut(s) 131, 144, 404, 1273, 1286, 1605, 1854, 2558
AlwNI CAGNNNCTG 2 cut(s) 2043, 2115
Ama87I CYCGRG 1 cut(s) 1577
AoxI GGCC 2 cut(s) 10, 2672
ApeKI GCWGC 9 cut(s) 72, 149, 497, 500, 615, 899, 1558, 2029, 2043
ApoI RAATTY 8 cut(s) 418, 588, 762, 794, 1284, 1476, 1513, 2170
AspLEI GCGC 4 cut(s) 187, 249, 1662, 2043
AspS9I GGNCC 1 cut(s) 10
AsuC2I CCSGG 1 cut(s) 1864
AsuHPI GGTGA 4 cut(s) 1085, 1643, 2255, 2533
AvaI CYCGRG 1 cut(s) 1577
BamHI GGATCC 2 cut(s) 136, 1278
BanI GGYRCC 1 cut(s) 246
BanII GRGCYC 1 cut(s) 1835
BbsI GAAGAC 6 cut(s) 443, 797, 1090, 1311, 1340, 2478
Bbv12I GWGCWC 2 cut(s) 21, 2498
BbvI GCAGC 9 cut(s) 84, 161, 509, 512, 602, 911, 1545, 2016, 2030
BccI CCATC 9 cut(s) 164, 258, 349, 919, 1622, 2093, 2587, 2613, 2672
BceAI ACGGC 1 cut(s) 307
BcgI CGANNNNNNTGC 2 cut(s) 1786, 1820
BciT130I CCWGG 4 cut(s) 14, 141, 1829, 2520
BciVI GTATCC 2 cut(s) 475, 1017
BclI TGATCA 1 cut(s) 472
BcnI CCSGG 1 cut(s) 1864
BcoDI GTCTC 2 cut(s) 659, 2279
BfaI CTAG 7 cut(s) 636, 812, 1148, 1568, 1727, 2231, 2676
BfmI CTRYAG 5 cut(s) 749, 897, 1391, 1880, 2212
BfoI RGCGCY 3 cut(s) 250, 1663, 2044
BfrI CTTAAG 3 cut(s) 1130, 1655, 2420
BfuAI ACCTGC 1 cut(s) 1976
BfuI GTATCC 2 cut(s) 475, 1017
BisI GCNGC 9 cut(s) 73, 150, 498, 501, 616, 900, 1559, 2030, 2044
BlsI GCNGC 9 cut(s) 74, 151, 499, 502, 617, 901, 1560, 2031, 2045
BmcAI AGTACT 1 cut(s) 1455
Bme1390I CCNGG 5 cut(s) 14, 141, 1829, 1864, 2520
BmeT110I CYCGRG 1 cut(s) 1577
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 1 cut(s) 10
BmiI GGNNCC 6 cut(s) 138, 145, 248, 716, 1280, 1547
BmrFI CCNGG 5 cut(s) 14, 141, 1829, 1864, 2520
BmsI GCATC 6 cut(s) 303, 472, 681, 2060, 2196, 2644
BpiI GAAGAC 6 cut(s) 443, 797, 1090, 1311, 1340, 2478
BpmI CTGGAG 1 cut(s) 35
BpuEI CTTGAG 4 cut(s) 181, 859, 1528, 2179
BpuMI CCSGG 1 cut(s) 1864
BsaBI GATNNNNATC 3 cut(s) 395, 1596, 2074
BsaHI GRCGYC 1 cut(s) 247
BsaJI CCNNGG 3 cut(s) 660, 1404, 1828
BsaWI WCCGGW 1 cut(s) 1433
BsaXI ACNNNNNCTCC 2 cut(s) 1945, 1975
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 522, 661, 1509, 1869, 2670
Bse1I ACTGG 6 cut(s) 513, 568, 1477, 2089, 2685, 2715
Bse3DI GCAATG 5 cut(s) 117, 217, 441, 1497, 2053
Bse8I GATNNNNATC 3 cut(s) 395, 1596, 2074
BseBI CCWGG 4 cut(s) 14, 141, 1829, 2520
BseDI CCNNGG 3 cut(s) 660, 1404, 1828
BseGI GGATG 5 cut(s) 58, 709, 2085, 2664, 2719
BseJI GATNNNNATC 3 cut(s) 395, 1596, 2074
BseLI CCNNNNNNNGG 6 cut(s) 48, 522, 661, 1509, 1869, 2670
BseMI GCAATG 5 cut(s) 117, 217, 441, 1497, 2053
BseMII CTCAG 5 cut(s) 690, 1482, 1848, 2016, 2050
BseNI ACTGG 6 cut(s) 513, 568, 1477, 2089, 2685, 2715
BseRI GAGGAG 1 cut(s) 1310
BseXI GCAGC 9 cut(s) 84, 161, 509, 512, 602, 911, 1545, 2016, 2030
BseYI CCCAGC 1 cut(s) 1259
Bsh1236I CGCG 2 cut(s) 185, 1406
BshFI GGCC 2 cut(s) 12, 2674
BshNI GGYRCC 1 cut(s) 246
BsiHKAI GWGCWC 2 cut(s) 21, 2498
BsiHKCI CYCGRG 1 cut(s) 1577
BsiSI CCGG 2 cut(s) 1434, 1863
BslFI GGGAC 6 cut(s) 22, 159, 1122, 1220, 1353, 2210
BslI CCNNNNNNNGG 6 cut(s) 48, 522, 661, 1509, 1869, 2670
BsmAI GTCTC 2 cut(s) 659, 2279
BsmFI GGGAC 6 cut(s) 22, 159, 1122, 1220, 1353, 2210
BsmI GAATGC 2 cut(s) 877, 1443
BsnI GGCC 2 cut(s) 12, 2674
BsoBI CYCGRG 1 cut(s) 1577
Bsp1286I GDGCHC 3 cut(s) 21, 1835, 2498
Bsp1407I TGTACA 1 cut(s) 1329
Bsp19I CCATGG 1 cut(s) 660
BspACI CCGC 4 cut(s) 147, 1404, 1406, 2147
BspANI GGCC 2 cut(s) 12, 2674
BspCNI CTCAG 5 cut(s) 691, 1483, 1847, 2017, 2049
BspFNI CGCG 2 cut(s) 185, 1406
BspLI GGNNCC 6 cut(s) 138, 145, 248, 716, 1280, 1547
BspMAI CTGCAG 4 cut(s) 753, 901, 1395, 2216
BspMI ACCTGC 1 cut(s) 1976
BspPI GGATC 8 cut(s) 131, 144, 404, 1273, 1286, 1605, 1854, 2558
BspQI GCTCTTC 2 cut(s) 826, 2450
BspT107I GGYRCC 1 cut(s) 246
BspTI CTTAAG 3 cut(s) 1130, 1655, 2420
BsrDI GCAATG 5 cut(s) 117, 217, 441, 1497, 2053
BsrGI TGTACA 1 cut(s) 1329
BsrI ACTGG 6 cut(s) 513, 568, 1477, 2089, 2685, 2715
BssECI CCNNGG 3 cut(s) 660, 1404, 1828
BssNAI GTATAC 1 cut(s) 2439
BssNI GRCGYC 1 cut(s) 247
BssT1I CCWWGG 1 cut(s) 660
Bst1107I GTATAC 1 cut(s) 2439
Bst2UI CCWGG 4 cut(s) 14, 141, 1829, 2520
Bst4CI ACNGT 6 cut(s) 199, 745, 826, 2117, 2299, 2506
Bst6I CTCTTC 4 cut(s) 826, 915, 1307, 2450
BstACI GRCGYC 1 cut(s) 247
BstAFI CTTAAG 3 cut(s) 1130, 1655, 2420
BstAPI GCANNNNNTGC 1 cut(s) 881
BstAUI TGTACA 1 cut(s) 1329
BstC8I GCNNGC 4 cut(s) 461, 1521, 1625, 1795
BstDEI CTNAG 7 cut(s) 408, 699, 1353, 1491, 1834, 2025, 2036
BstDSI CCRYGG 2 cut(s) 660, 1404
BstEII GGTNACC 1 cut(s) 2243
BstF5I GGATG 5 cut(s) 58, 709, 2085, 2664, 2719
BstFNI CGCG 2 cut(s) 185, 1406
BstH2I RGCGCY 3 cut(s) 250, 1663, 2044
BstHHI GCGC 4 cut(s) 187, 249, 1662, 2043
BstMAI GTCTC 2 cut(s) 659, 2279
BstMWI GCNNNNNNNGC 6 cut(s) 119, 300, 881, 1265, 1525, 2038
BstNI CCWGG 4 cut(s) 14, 141, 1829, 2520
BstPI GGTNACC 1 cut(s) 2243
BstSCI CCNGG 5 cut(s) 12, 139, 1827, 1862, 2518
BstSFI CTRYAG 5 cut(s) 749, 897, 1391, 1880, 2212
BstUI CGCG 2 cut(s) 185, 1406
BstV1I GCAGC 9 cut(s) 84, 161, 509, 512, 602, 911, 1545, 2016, 2030
BstV2I GAAGAC 6 cut(s) 443, 797, 1090, 1311, 1340, 2478
BstX2I RGATCY 5 cut(s) 136, 1278, 1597, 1859, 2563
BstXI CCANNNNNNTGG 1 cut(s) 1925
BstYI RGATCY 5 cut(s) 136, 1278, 1597, 1859, 2563
BstZ17I GTATAC 1 cut(s) 2439
BsuI GTATCC 2 cut(s) 475, 1017
BsuRI GGCC 2 cut(s) 12, 2674
BtgI CCRYGG 2 cut(s) 660, 1404
BtgZI GCGATG 1 cut(s) 1774
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 5 cut(s) 58, 709, 2085, 2664, 2719
BtsIMutI CAGTG 3 cut(s) 723, 1470, 2295
BveI ACCTGC 1 cut(s) 1976
Cac8I GCNNGC 4 cut(s) 461, 1521, 1625, 1795
CaiI CAGNNNCTG 2 cut(s) 2043, 2115
CfoI GCGC 4 cut(s) 187, 249, 1662, 2043
Cfr13I GGNCC 1 cut(s) 10
Cfr42I CCGCGG 1 cut(s) 1407
Csp6I GTAC 4 cut(s) 1330, 1454, 1995, 2701
CviQI GTAC 4 cut(s) 1330, 1454, 1995, 2701
DdeI CTNAG 7 cut(s) 408, 699, 1353, 1491, 1834, 2025, 2036
DinI GGCGCC 1 cut(s) 248
Eam1104I CTCTTC 4 cut(s) 826, 915, 1307, 2450
EarI CTCTTC 4 cut(s) 826, 915, 1307, 2450
Eco130I CCWWGG 1 cut(s) 660
Eco24I GRGCYC 1 cut(s) 1835
Eco32I GATATC 1 cut(s) 1320
Eco57I CTGAAG 4 cut(s) 1032, 2222, 2421, 2474
Eco88I CYCGRG 1 cut(s) 1577
Eco91I GGTNACC 1 cut(s) 2243
EcoO65I GGTNACC 1 cut(s) 2243
EcoRI GAATTC 1 cut(s) 588
EcoRII CCWGG 4 cut(s) 12, 139, 1827, 2518
EcoRV GATATC 1 cut(s) 1320
EcoT14I CCWWGG 1 cut(s) 660
EcoT22I ATGCAT 1 cut(s) 877
EcoT38I GRGCYC 1 cut(s) 1835
EgeI GGCGCC 1 cut(s) 248
EheI GGCGCC 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 660
FalI AAGNNNNNCTT 6 cut(s) 1546, 1578, 1722, 1754, 2394, 2426
FaqI GGGAC 6 cut(s) 22, 159, 1122, 1220, 1353, 2210
FauNDI CATATG 2 cut(s) 92, 1901
FbaI TGATCA 1 cut(s) 472
FblI GTMKAC 1 cut(s) 2438
Fnu4HI GCNGC 9 cut(s) 73, 150, 498, 501, 616, 900, 1559, 2030, 2044
FokI GGATG 4 cut(s) 65, 716, 2072, 2651
FriOI GRGCYC 1 cut(s) 1835
Fsp4HI GCNGC 9 cut(s) 73, 150, 498, 501, 616, 900, 1559, 2030, 2044
FspBI CTAG 7 cut(s) 636, 812, 1148, 1568, 1727, 2231, 2676
GlaI GCGC 4 cut(s) 186, 248, 1661, 2042
GluI GCNGC 9 cut(s) 73, 150, 498, 501, 616, 900, 1559, 2030, 2044
GsaI CCCAGC 1 cut(s) 1263
GsuI CTGGAG 1 cut(s) 35
HaeII RGCGCY 3 cut(s) 250, 1663, 2044
HaeIII GGCC 2 cut(s) 12, 2674
HapII CCGG 2 cut(s) 1434, 1863
HhaI GCGC 4 cut(s) 187, 249, 1662, 2043
Hin1I GRCGYC 1 cut(s) 247
Hin6I GCGC 4 cut(s) 185, 247, 1660, 2041
HinP1I GCGC 4 cut(s) 185, 247, 1660, 2041
HincII GTYRAC 1 cut(s) 1159
HindII GTYRAC 1 cut(s) 1159
HindIII AAGCTT 1 cut(s) 1621
HpaI GTTAAC 1 cut(s) 1159
HpaII CCGG 2 cut(s) 1434, 1863
HphI GGTGA 4 cut(s) 1085, 1643, 2255, 2533
Hpy166II GTNNAC 3 cut(s) 289, 1159, 2439
Hpy8I GTNNAC 3 cut(s) 289, 1159, 2439
HpyAV CCTTC 8 cut(s) 905, 1007, 1099, 1572, 1694, 2356, 2375, 2420
HpyCH4III ACNGT 6 cut(s) 199, 745, 826, 2117, 2299, 2506
HpyCH4IV ACGT 4 cut(s) 1308, 1648, 1944, 2441
HpyF10VI GCNNNNNNNGC 6 cut(s) 119, 300, 881, 1265, 1525, 2038
HpyF3I CTNAG 7 cut(s) 408, 699, 1353, 1491, 1834, 2025, 2036
HpySE526I ACGT 4 cut(s) 1308, 1648, 1944, 2441
Hsp92I GRCGYC 1 cut(s) 247
HspAI GCGC 4 cut(s) 185, 247, 1660, 2041
KasI GGCGCC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 472
KspAI GTTAAC 1 cut(s) 1159
KspI CCGCGG 1 cut(s) 1407
LguI GCTCTTC 2 cut(s) 826, 2450
LmnI GCTCC 6 cut(s) 16, 714, 1406, 1928, 1953, 2013
Lsp1109I GCAGC 9 cut(s) 84, 161, 509, 512, 602, 911, 1545, 2016, 2030
LweI GCATC 6 cut(s) 303, 472, 681, 2060, 2196, 2644
MaeI CTAG 7 cut(s) 636, 812, 1148, 1568, 1727, 2231, 2676
MaeII ACGT 4 cut(s) 1308, 1648, 1944, 2441
MaeIII GTNAC 7 cut(s) 820, 1414, 1644, 1649, 2137, 2243, 2299
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 5 cut(s) 136, 1278, 1597, 1859, 2563
MhlI GDGCHC 3 cut(s) 21, 1835, 2498
Mly113I GGCGCC 1 cut(s) 247
MlyI GAGTC 4 cut(s) 902, 1502, 1682, 2281
MmeI TCCRAC 6 cut(s) 215, 286, 565, 808, 1523, 2427
Mph1103I ATGCAT 1 cut(s) 877
MspA1I CMGCKG 1 cut(s) 1406
MspCI CTTAAG 3 cut(s) 1130, 1655, 2420
MspI CCGG 2 cut(s) 1434, 1863
MspR9I CCNGG 5 cut(s) 14, 141, 1829, 1864, 2520
MunI CAATTG 1 cut(s) 1215
Mva1269I GAATGC 2 cut(s) 877, 1443
MvaI CCWGG 4 cut(s) 14, 141, 1829, 2520
MvnI CGCG 2 cut(s) 185, 1406
MwoI GCNNNNNNNGC 6 cut(s) 119, 300, 881, 1265, 1525, 2038
NarI GGCGCC 1 cut(s) 247
NciI CCSGG 1 cut(s) 1864
NcoI CCATGG 1 cut(s) 660
NdeI CATATG 2 cut(s) 92, 1901
NlaIV GGNNCC 6 cut(s) 138, 145, 248, 716, 1280, 1547
NmeAIII GCCGAG 1 cut(s) 680
NmuCI GTSAC 3 cut(s) 820, 1649, 2243
NsiI ATGCAT 1 cut(s) 877
PaeR7I CTCGAG 1 cut(s) 1577
PciSI GCTCTTC 2 cut(s) 826, 2450
PctI GAATGC 2 cut(s) 877, 1443
PflFI GACNNNGTC 1 cut(s) 974
PflMI CCANNNNNTGG 1 cut(s) 2670
PfoI TCCNGGA 1 cut(s) 139
PkrI GCNGC 9 cut(s) 74, 151, 499, 502, 617, 901, 1560, 2031, 2045
PleI GAGTC 4 cut(s) 901, 1501, 1682, 2281
PluTI GGCGCC 1 cut(s) 250
PpsI GAGTC 4 cut(s) 901, 1501, 1682, 2281
Psp6I CCWGG 4 cut(s) 12, 139, 1827, 2518
PspEI GGTNACC 1 cut(s) 2243
PspFI CCCAGC 1 cut(s) 1259
PspGI CCWGG 4 cut(s) 12, 139, 1827, 2518
PspN4I GGNNCC 6 cut(s) 138, 145, 248, 716, 1280, 1547
PspPI GGNCC 1 cut(s) 10
PspXI VCTCGAGB 1 cut(s) 1577
PsrI GAACNNNNNNTAC 2 cut(s) 136, 168
PstI CTGCAG 4 cut(s) 753, 901, 1395, 2216
PstNI CAGNNNCTG 2 cut(s) 2043, 2115
PsuI RGATCY 5 cut(s) 136, 1278, 1597, 1859, 2563
PsyI GACNNNGTC 1 cut(s) 974
RsaI GTAC 4 cut(s) 1331, 1455, 1996, 2702
RsaNI GTAC 4 cut(s) 1330, 1454, 1995, 2701
SacII CCGCGG 1 cut(s) 1407
SapI GCTCTTC 2 cut(s) 826, 2450
SatI GCNGC 9 cut(s) 73, 150, 498, 501, 616, 900, 1559, 2030, 2044
Sau96I GGNCC 1 cut(s) 10
ScaI AGTACT 1 cut(s) 1455
SchI GAGTC 4 cut(s) 902, 1502, 1682, 2281
ScrFI CCNGG 5 cut(s) 14, 141, 1829, 1864, 2520
SduI GDGCHC 3 cut(s) 21, 1835, 2498
SfaNI GCATC 6 cut(s) 303, 472, 681, 2060, 2196, 2644
SfcI CTRYAG 5 cut(s) 749, 897, 1391, 1880, 2212
SfoI GGCGCC 1 cut(s) 248
Sfr274I CTCGAG 1 cut(s) 1577
Sfr303I CCGCGG 1 cut(s) 1407
SgrBI CCGCGG 1 cut(s) 1407
SlaI CTCGAG 1 cut(s) 1577
SmlI CTYRAG 8 cut(s) 160, 838, 1130, 1507, 1577, 1655, 2158, 2420
SmoI CTYRAG 8 cut(s) 160, 838, 1130, 1507, 1577, 1655, 2158, 2420
SsiI CCGC 4 cut(s) 147, 1404, 1406, 2147
SspDI GGCGCC 1 cut(s) 246
SspI AATATT 2 cut(s) 1849, 1924
SspMI CTAG 7 cut(s) 636, 812, 1148, 1568, 1727, 2231, 2676
StyD4I CCNGG 5 cut(s) 12, 139, 1827, 1862, 2518
StyI CCWWGG 1 cut(s) 660
TaaI ACNGT 6 cut(s) 199, 745, 826, 2117, 2299, 2506
TaiI ACGT 4 cut(s) 1311, 1651, 1947, 2444
TaqI TCGA 2 cut(s) 1578, 2549
TatI WGTACW 3 cut(s) 1329, 1453, 2700
TscAI CASTG 3 cut(s) 730, 1477, 2302
TseFI GTSAC 3 cut(s) 820, 1649, 2243
TseI GCWGC 9 cut(s) 72, 149, 497, 500, 615, 899, 1558, 2029, 2043
Tsp45I GTSAC 3 cut(s) 820, 1649, 2243
TspGWI ACGGA 1 cut(s) 538
TspRI CASTG 3 cut(s) 730, 1477, 2302
Tth111I GACNNNGTC 1 cut(s) 974
Van91I CCANNNNNTGG 1 cut(s) 2670
Vha464I CTTAAG 3 cut(s) 1130, 1655, 2420
XapI RAATTY 8 cut(s) 418, 588, 762, 794, 1284, 1476, 1513, 2170
XbaI TCTAGA 2 cut(s) 1567, 1726
XhoI CTCGAG 1 cut(s) 1577
XmiI GTMKAC 1 cut(s) 2438
XspI CTAG 7 cut(s) 636, 812, 1148, 1568, 1727, 2231, 2676
ZrmI AGTACT 1 cut(s) 1455
Zsp2I ATGCAT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.