Rh6AG098300

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0011520
Physical Location & Seq
Forward (+)
14562935 .. 14566900
3966 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG098300.1

Sequence Viewer

Length: 2619 bp
ATGGTTGATGAGCTTCTTAGGAAGGGACAGTTAATTAAAGATGATTCATTGACTTATTTGCTGGTAGAGAACGTAAAGGCGCTTCCAACGACAGTAATAGTGAGCAATGAATCAACTAAAAGAACGATAGGAGAAATCTGGCGCCATCTGACAGCAGACCATGAAGTGAAAAAGATTGGTGTTTACGGCATCGGTGGCGTTGGAAAAACAACAATTATGAAAGAAATAAATAACCAACTCAAAAGAGAGATGGAGGAAAAGAAGATCACTTGTTTTGACAATGTGATCTGGATCACAATGCCTAAGAGTTCAAATTCCGAAAAATTGCAGAAGACCATTGCAAAATCTGTGAGCTTGCATCTCCTTGATCATTGGGATACAATGGAAAACGCAGCAGCCTTACTGGAAGCCTTAACACGGAGGAAGAAACTTTTGCTGATTTTTGATGATGTTTGGACTGGATTTTCTTTAGAAAATGTTGGAATTCCTGAACCAACCAGAGAAAATGGCTGCAAGTTCATATTAACTACTAGATCGTTAAGGGTGTGCCGAGCCATGGAGACAGACAAAGAAGTGGAGGTAAAGATGCTTTCTGAGGATGAAACATGGAGCCTTTTCACTGAAAAAGTTGGTTCTACTGTTCTGCAGAAAACAGAAATTTATGTTCTTGCAAGGAAAGTAGCGAAAGAATTTGGTGGTCTTCCACTAGCCATTGTCACAGTCGGAAGAGCCTTGAGAAAACTAGAGAACGAAATGGGGTGGCAGAATGCATTGACTGCATTAAGAGAGTCTGCAGCTAATGTGGAAGGCATGGAAGAGATGGTGTTTTCATGTTTGAGATTCAGTTATGAAAGATTAGATGATGACATTGTCCGATCATGTTTCCTATATTGTGCCTTGTATCCTGAAGGTCATCATATTGAAGCAAAAGAGTTAATTGAAAATTGGTTGTGGGAGGGTTTGCTCGGTGATGTAGGAAGACTACAAGCTAATATATGGAAGGGACAAATGATTTTGGCTAATCTTAAGGATTCTTGTCTGCTAGATCATGTTAACGCAGAGAGTGGCATTGAATGTGTCAAAATGCACGACTTAATTAGGGACATGGCAATTGATATTACAAGAAAAAGTAGTCACGTTTGCCTTATCAGAGCTGGGATTGCAGTAGAAAGGATCCAAATTCAAAGTGAGGAGATTGAAGACGTGAAGAGGATATCCATGATGTATAATGATTTGATATGTCTTCCTAAGAATCTATCTTGTCCCAAGTTATCCTCTTTGCTGCTGCAGTATTGCTCCGCGGACAAAGTAACTGATCTTTGTTTTACCGGAATGCAGAATCTTAAAGTACTTGACTTGTCTTTCACTGGAATTTCCTGTCTGTCTGAGTCCATTGCCAACTTGAGGAATTTGCGTGCCTTGCTATTGCGTAGTTGTTGGAACCTAACAAGGCTGCCTTCTCTAGAATTGCTCGAGGCTCTGTGGGATTTGGATCTATCTTATACTCCCATCAGAAGCTTGCCATTAGGAATGGAAATGTTACGTCACCTTAAGCGCCTGAATCTTTCTTATACAGAATTGGACTCGTTTCCAGAAGGACTACTAACCACTCTCAATTTTCTAGAAGAATTGCTTTTGTTTGGTTCTCAATGTGCGTTTGGATTAGAACTTGTCAATGAACTCATCGCCTGCATAAACATCGTTGTTCTTGAAGTGCAATTCCAGGGCTCAGAAGTGTTTAATATTTATACAAGATCCGGGCATTGGAATAATCTACAGAGTTTCAGATTTGACATATGCTCATTCTTTTACCACAATATTGGAGCAATAAGGAAGCACGTTGAAAGGAGCAAGAGTATAACCTGCTTAGGAAGTTTCTTTGTGAATGGTACTCGTCTTTTGCTCCCTGATTGCACTTCTGAGCTGCAACTCAGGCGCTGCAATGATGTTGATATATTGTCAAGATGCTTATCAGATTCCATCCAGTTGAAAAAATGTGCTGTCAGATACTGTAATCAAATGGAGAGTATAGTAACGACTGCGGAGAACAACTTGAGCAATCTAAATTCGTTAAAGCTGTATTCTCTAACAAATCTGAAGATGCTCTGCAGGGGCGTTGTCCCTCTAGGAACTTTCGGTGGCCTTATGATCTTGCAAATCAGTTGTTGTCATTCTATTGAGACTCTATTCACTGTAACGCTGATTGAACAGCTCGGAAACCTTGAAGATCTCACTATCAGATATTGTTTAAGATTGAAGGTGCTGATACAGGAAGAAGGGTCAATCCAGAGAGCTGAAGTCAGCCTTCCAAGACTTAAGAATCTGGAATTGTATACGTTGTTGGAACTGGAGAGCATTTATAGTGAAGACATGATTTGCAATTCTTTGAGCACAATTACTGTTCAGAAATGTCCAGGTCTAAAGAAGCTACCCATCACCATATCGACAGATCAAGGAGATCCACAGCGACAACCATCAACCACTCCACCAATCAAAGAAATCATAGCAGAGAGATGGTGGTGGGATTCAGTAGAATTGGCTAATCCCGATGCAAAAACCATCCTCTGGCCTAGACTGGTAGAGCCTACAATGATGTACTTGGAACTGGATGAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
LRR_4 LRR_8 NB-ARC

Protein Analysis

872

Amino Acids

99.19

Weight (kDa)

5.54

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 41 - 212 4.3e-40 NB-ARC domain
TniB PF05621 53 - 151 1e-05 Bacterial TniB protein
WHD_DRP PF23559 300 - 370 8.7e-08 Disease resistance protein Winged helix domain
LRR_8 PF13855 422 - 479 1.9e-08 Leucine rich repeat
LRR_14 PF23598 442 - 577 3e-07 Leucine-rich repeat region
LRR_RPS2 PF23247 641 - 749 1e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 698 - 810 3.4e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1871
AccB1I GGYRCC 1 cut(s) 141
AccB7I CCANNNNNTGG 1 cut(s) 2565
AccI GTMKAC 1 cut(s) 2333
AccII CGCG 1 cut(s) 1301
AciI CCGC 3 cut(s) 1299, 1301, 2042
AclWI GGATC 6 cut(s) 299, 1168, 1181, 1500, 1749, 2453
AcsI RAATTY 8 cut(s) 313, 483, 657, 689, 1179, 1371, 1408, 2065
AcuI CTGAAG 3 cut(s) 927, 2117, 2316
AcyI GRCGYC 1 cut(s) 142
AfaI GTAC 3 cut(s) 1350, 1891, 2597
AfiI CCNNNNNNNGG 5 cut(s) 417, 556, 1404, 1764, 2565
AflII CTTAAG 3 cut(s) 1025, 1550, 2315
AjiI CACGTC 1 cut(s) 1204
AjnI CCWGG 2 cut(s) 1722, 2413
Alw21I GWGCWC 1 cut(s) 2393
Alw26I GTCTC 2 cut(s) 554, 2174
AlwI GGATC 6 cut(s) 299, 1168, 1181, 1500, 1749, 2453
AlwNI CAGNNNCTG 2 cut(s) 1938, 2010
Ama87I CYCGRG 1 cut(s) 1472
AoxI GGCC 2 cut(s) 2140, 2567
ApeKI GCWGC 9 cut(s) 392, 395, 510, 794, 1282, 1285, 1453, 1924, 1938
ApoI RAATTY 8 cut(s) 313, 483, 657, 689, 1179, 1371, 1408, 2065
AspLEI GCGC 4 cut(s) 82, 144, 1557, 1938
AsuC2I CCSGG 1 cut(s) 1759
AsuHPI GGTGA 3 cut(s) 980, 1538, 2428
AvaI CYCGRG 1 cut(s) 1472
BamHI GGATCC 1 cut(s) 1173
BanI GGYRCC 1 cut(s) 141
BanII GRGCYC 1 cut(s) 1730
BarI GAAGNNNNNNTAC 2 cut(s) 66, 98
BbsI GAAGAC 6 cut(s) 338, 692, 985, 1206, 1235, 2373
Bbv12I GWGCWC 1 cut(s) 2393
BbvI GCAGC 9 cut(s) 404, 407, 497, 806, 1269, 1272, 1440, 1911, 1925
BccI CCATC 9 cut(s) 153, 244, 814, 1517, 1988, 2441, 2482, 2508, 2567
BceAI ACGGC 1 cut(s) 202
BcgI CGANNNNNNTGC 2 cut(s) 1681, 1715
BciT130I CCWGG 2 cut(s) 1724, 2415
BciVI GTATCC 2 cut(s) 370, 912
BclI TGATCA 1 cut(s) 367
BcnI CCSGG 1 cut(s) 1759
BcoDI GTCTC 2 cut(s) 554, 2174
BfaI CTAG 8 cut(s) 531, 707, 743, 1043, 1463, 1622, 2126, 2571
BfmI CTRYAG 5 cut(s) 644, 792, 1286, 1775, 2107
BfoI RGCGCY 4 cut(s) 83, 145, 1558, 1939
BfrI CTTAAG 3 cut(s) 1025, 1550, 2315
BfuAI ACCTGC 1 cut(s) 1871
BfuI GTATCC 2 cut(s) 370, 912
BglII AGATCT 1 cut(s) 2227
BisI GCNGC 9 cut(s) 393, 396, 511, 795, 1283, 1286, 1454, 1925, 1939
BlsI GCNGC 9 cut(s) 394, 397, 512, 796, 1284, 1287, 1455, 1926, 1940
BmcAI AGTACT 1 cut(s) 1350
Bme1390I CCNGG 3 cut(s) 1724, 1759, 2415
BmeT110I CYCGRG 1 cut(s) 1472
BmgBI CACGTC 1 cut(s) 1204
BmiI GGNNCC 4 cut(s) 143, 611, 1175, 1442
BmrFI CCNGG 3 cut(s) 1724, 1759, 2415
BmsI GCATC 6 cut(s) 198, 367, 576, 1955, 2091, 2539
BpiI GAAGAC 6 cut(s) 338, 692, 985, 1206, 1235, 2373
BpmI CTGGAG 1 cut(s) 2369
Bpu10I CCTNAGC 1 cut(s) 1867
BpuEI CTTGAG 3 cut(s) 754, 1423, 2074
BpuMI CCSGG 1 cut(s) 1759
BsaBI GATNNNNATC 3 cut(s) 290, 1491, 1969
BsaHI GRCGYC 1 cut(s) 142
BsaJI CCNNGG 3 cut(s) 555, 1299, 1723
BsaWI WCCGGW 1 cut(s) 1328
BsaXI ACNNNNNCTCC 2 cut(s) 1840, 1870
Bsc4I CCNNNNNNNGG 5 cut(s) 417, 556, 1404, 1764, 2565
Bse1I ACTGG 7 cut(s) 408, 463, 1372, 1984, 2352, 2580, 2610
Bse3DI GCAATG 4 cut(s) 112, 336, 1392, 1948
Bse8I GATNNNNATC 3 cut(s) 290, 1491, 1969
BseBI CCWGG 2 cut(s) 1724, 2415
BseDI CCNNGG 3 cut(s) 555, 1299, 1723
BseGI GGATG 4 cut(s) 604, 1980, 2559, 2614
BseJI GATNNNNATC 3 cut(s) 290, 1491, 1969
BseLI CCNNNNNNNGG 5 cut(s) 417, 556, 1404, 1764, 2565
BseMI GCAATG 4 cut(s) 112, 336, 1392, 1948
BseMII CTCAG 5 cut(s) 585, 1377, 1743, 1911, 1945
BseNI ACTGG 7 cut(s) 408, 463, 1372, 1984, 2352, 2580, 2610
BseRI GAGGAG 1 cut(s) 1205
BseXI GCAGC 9 cut(s) 404, 407, 497, 806, 1269, 1272, 1440, 1911, 1925
BseYI CCCAGC 1 cut(s) 1154
Bsh1236I CGCG 1 cut(s) 1301
BshFI GGCC 2 cut(s) 2142, 2569
BshNI GGYRCC 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 2393
BsiHKCI CYCGRG 1 cut(s) 1472
BsiSI CCGG 2 cut(s) 1329, 1758
BslFI GGGAC 5 cut(s) 39, 1017, 1115, 1248, 2105
BslI CCNNNNNNNGG 5 cut(s) 417, 556, 1404, 1764, 2565
BsmAI GTCTC 2 cut(s) 554, 2174
BsmFI GGGAC 5 cut(s) 39, 1017, 1115, 1248, 2105
BsmI GAATGC 2 cut(s) 772, 1338
BsnI GGCC 2 cut(s) 2142, 2569
BsoBI CYCGRG 1 cut(s) 1472
Bsp1286I GDGCHC 2 cut(s) 1730, 2393
Bsp19I CCATGG 1 cut(s) 555
BspACI CCGC 3 cut(s) 1299, 1301, 2042
BspANI GGCC 2 cut(s) 2142, 2569
BspCNI CTCAG 5 cut(s) 586, 1378, 1742, 1912, 1944
BspFNI CGCG 1 cut(s) 1301
BspLI GGNNCC 4 cut(s) 143, 611, 1175, 1442
BspMAI CTGCAG 4 cut(s) 648, 796, 1290, 2111
BspMI ACCTGC 1 cut(s) 1871
BspPI GGATC 6 cut(s) 299, 1168, 1181, 1500, 1749, 2453
BspQI GCTCTTC 1 cut(s) 721
BspT107I GGYRCC 1 cut(s) 141
BspTI CTTAAG 3 cut(s) 1025, 1550, 2315
BsrDI GCAATG 4 cut(s) 112, 336, 1392, 1948
BsrI ACTGG 7 cut(s) 408, 463, 1372, 1984, 2352, 2580, 2610
BssECI CCNNGG 3 cut(s) 555, 1299, 1723
BssNAI GTATAC 1 cut(s) 2334
BssNI GRCGYC 1 cut(s) 142
BssT1I CCWWGG 1 cut(s) 555
Bst1107I GTATAC 1 cut(s) 2334
Bst2UI CCWGG 2 cut(s) 1724, 2415
Bst4CI ACNGT 7 cut(s) 30, 94, 640, 721, 2012, 2194, 2401
Bst6I CTCTTC 3 cut(s) 721, 810, 1202
BstACI GRCGYC 1 cut(s) 142
BstAFI CTTAAG 3 cut(s) 1025, 1550, 2315
BstAPI GCANNNNNTGC 1 cut(s) 776
BstC8I GCNNGC 4 cut(s) 356, 1416, 1520, 1690
BstDEI CTNAG 9 cut(s) 17, 303, 594, 1248, 1386, 1729, 1867, 1920, 1931
BstDSI CCRYGG 2 cut(s) 555, 1299
BstF5I GGATG 4 cut(s) 604, 1980, 2559, 2614
BstFNI CGCG 1 cut(s) 1301
BstH2I RGCGCY 4 cut(s) 83, 145, 1558, 1939
BstHHI GCGC 4 cut(s) 82, 144, 1557, 1938
BstMAI GTCTC 2 cut(s) 554, 2174
BstMWI GCNNNNNNNGC 5 cut(s) 195, 776, 1160, 1420, 1933
BstNI CCWGG 2 cut(s) 1724, 2415
BstSCI CCNGG 3 cut(s) 1722, 1757, 2413
BstSFI CTRYAG 5 cut(s) 644, 792, 1286, 1775, 2107
BstUI CGCG 1 cut(s) 1301
BstV1I GCAGC 9 cut(s) 404, 407, 497, 806, 1269, 1272, 1440, 1911, 1925
BstV2I GAAGAC 6 cut(s) 338, 692, 985, 1206, 1235, 2373
BstX2I RGATCY 5 cut(s) 1173, 1492, 1754, 2227, 2458
BstXI CCANNNNNNTGG 1 cut(s) 1820
BstYI RGATCY 5 cut(s) 1173, 1492, 1754, 2227, 2458
BstZ17I GTATAC 1 cut(s) 2334
BsuI GTATCC 2 cut(s) 370, 912
BsuRI GGCC 2 cut(s) 2142, 2569
BtgI CCRYGG 2 cut(s) 555, 1299
BtgZI GCGATG 1 cut(s) 1669
BtrI CACGTC 1 cut(s) 1204
BtsCI GGATG 4 cut(s) 604, 1980, 2559, 2614
BtsIMutI CAGTG 3 cut(s) 618, 1365, 2190
BveI ACCTGC 1 cut(s) 1871
Cac8I GCNNGC 4 cut(s) 356, 1416, 1520, 1690
CaiI CAGNNNCTG 2 cut(s) 1938, 2010
CfoI GCGC 4 cut(s) 82, 144, 1557, 1938
Cfr42I CCGCGG 1 cut(s) 1302
Csp6I GTAC 3 cut(s) 1349, 1890, 2596
CviQI GTAC 3 cut(s) 1349, 1890, 2596
DdeI CTNAG 9 cut(s) 17, 303, 594, 1248, 1386, 1729, 1867, 1920, 1931
DinI GGCGCC 1 cut(s) 143
Eam1104I CTCTTC 3 cut(s) 721, 810, 1202
EarI CTCTTC 3 cut(s) 721, 810, 1202
Eco130I CCWWGG 1 cut(s) 555
Eco24I GRGCYC 1 cut(s) 1730
Eco32I GATATC 1 cut(s) 1215
Eco57I CTGAAG 3 cut(s) 927, 2117, 2316
Eco88I CYCGRG 1 cut(s) 1472
EcoRI GAATTC 1 cut(s) 483
EcoRII CCWGG 2 cut(s) 1722, 2413
EcoRV GATATC 1 cut(s) 1215
EcoT14I CCWWGG 1 cut(s) 555
EcoT22I ATGCAT 1 cut(s) 772
EcoT38I GRGCYC 1 cut(s) 1730
EgeI GGCGCC 1 cut(s) 143
EheI GGCGCC 1 cut(s) 143
ErhI CCWWGG 1 cut(s) 555
FalI AAGNNNNNCTT 6 cut(s) 1441, 1473, 1617, 1649, 2289, 2321
FaqI GGGAC 5 cut(s) 39, 1017, 1115, 1248, 2105
FauNDI CATATG 1 cut(s) 1796
FbaI TGATCA 1 cut(s) 367
FblI GTMKAC 1 cut(s) 2333
Fnu4HI GCNGC 9 cut(s) 393, 396, 511, 795, 1283, 1286, 1454, 1925, 1939
FokI GGATG 3 cut(s) 611, 1967, 2546
FriOI GRGCYC 1 cut(s) 1730
Fsp4HI GCNGC 9 cut(s) 393, 396, 511, 795, 1283, 1286, 1454, 1925, 1939
FspBI CTAG 8 cut(s) 531, 707, 743, 1043, 1463, 1622, 2126, 2571
GlaI GCGC 4 cut(s) 81, 143, 1556, 1937
GluI GCNGC 9 cut(s) 393, 396, 511, 795, 1283, 1286, 1454, 1925, 1939
GsaI CCCAGC 1 cut(s) 1158
GsuI CTGGAG 1 cut(s) 2369
HaeII RGCGCY 4 cut(s) 83, 145, 1558, 1939
HaeIII GGCC 2 cut(s) 2142, 2569
HapII CCGG 2 cut(s) 1329, 1758
HhaI GCGC 4 cut(s) 82, 144, 1557, 1938
Hin1I GRCGYC 1 cut(s) 142
Hin6I GCGC 4 cut(s) 80, 142, 1555, 1936
HinP1I GCGC 4 cut(s) 80, 142, 1555, 1936
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HindIII AAGCTT 1 cut(s) 1516
HpaI GTTAAC 1 cut(s) 1054
HpaII CCGG 2 cut(s) 1329, 1758
HphI GGTGA 3 cut(s) 980, 1538, 2428
Hpy166II GTNNAC 3 cut(s) 184, 1054, 2334
Hpy8I GTNNAC 3 cut(s) 184, 1054, 2334
HpyAV CCTTC 9 cut(s) 16, 800, 902, 994, 1467, 1589, 2251, 2270, 2315
HpyCH4III ACNGT 7 cut(s) 30, 94, 640, 721, 2012, 2194, 2401
HpyCH4IV ACGT 6 cut(s) 72, 1137, 1203, 1543, 1839, 2336
HpyF10VI GCNNNNNNNGC 5 cut(s) 195, 776, 1160, 1420, 1933
HpyF3I CTNAG 9 cut(s) 17, 303, 594, 1248, 1386, 1729, 1867, 1920, 1931
HpySE526I ACGT 6 cut(s) 72, 1137, 1203, 1543, 1839, 2336
Hsp92I GRCGYC 1 cut(s) 142
HspAI GCGC 4 cut(s) 80, 142, 1555, 1936
KasI GGCGCC 1 cut(s) 141
Ksp22I TGATCA 1 cut(s) 367
KspAI GTTAAC 1 cut(s) 1054
KspI CCGCGG 1 cut(s) 1302
LguI GCTCTTC 1 cut(s) 721
LmnI GCTCC 5 cut(s) 609, 1301, 1823, 1848, 1908
Lsp1109I GCAGC 9 cut(s) 404, 407, 497, 806, 1269, 1272, 1440, 1911, 1925
LweI GCATC 6 cut(s) 198, 367, 576, 1955, 2091, 2539
MaeI CTAG 8 cut(s) 531, 707, 743, 1043, 1463, 1622, 2126, 2571
MaeII ACGT 6 cut(s) 72, 1137, 1203, 1543, 1839, 2336
MaeIII GTNAC 7 cut(s) 715, 1133, 1309, 1539, 1544, 2032, 2194
MfeI CAATTG 1 cut(s) 1110
MflI RGATCY 5 cut(s) 1173, 1492, 1754, 2227, 2458
MhlI GDGCHC 2 cut(s) 1730, 2393
Mly113I GGCGCC 1 cut(s) 142
MlyI GAGTC 4 cut(s) 797, 1397, 1577, 2176
MmeI TCCRAC 6 cut(s) 110, 181, 460, 703, 1418, 2322
Mph1103I ATGCAT 1 cut(s) 772
MspA1I CMGCKG 1 cut(s) 1301
MspCI CTTAAG 3 cut(s) 1025, 1550, 2315
MspI CCGG 2 cut(s) 1329, 1758
MspR9I CCNGG 3 cut(s) 1724, 1759, 2415
MunI CAATTG 1 cut(s) 1110
Mva1269I GAATGC 2 cut(s) 772, 1338
MvaI CCWGG 2 cut(s) 1724, 2415
MvnI CGCG 1 cut(s) 1301
MwoI GCNNNNNNNGC 5 cut(s) 195, 776, 1160, 1420, 1933
NarI GGCGCC 1 cut(s) 142
NciI CCSGG 1 cut(s) 1759
NcoI CCATGG 1 cut(s) 555
NdeI CATATG 1 cut(s) 1796
NlaIV GGNNCC 4 cut(s) 143, 611, 1175, 1442
NmeAIII GCCGAG 1 cut(s) 575
NmuCI GTSAC 3 cut(s) 715, 1133, 1544
NsiI ATGCAT 1 cut(s) 772
PacI TTAATTAA 1 cut(s) 36
PaeR7I CTCGAG 1 cut(s) 1472
PciSI GCTCTTC 1 cut(s) 721
PctI GAATGC 2 cut(s) 772, 1338
PflFI GACNNNGTC 1 cut(s) 869
PflMI CCANNNNNTGG 1 cut(s) 2565
PkrI GCNGC 9 cut(s) 394, 397, 512, 796, 1284, 1287, 1455, 1926, 1940
PleI GAGTC 4 cut(s) 796, 1396, 1577, 2176
PluTI GGCGCC 1 cut(s) 145
PpsI GAGTC 4 cut(s) 796, 1396, 1577, 2176
Psp6I CCWGG 2 cut(s) 1722, 2413
PspFI CCCAGC 1 cut(s) 1154
PspGI CCWGG 2 cut(s) 1722, 2413
PspN4I GGNNCC 4 cut(s) 143, 611, 1175, 1442
PspXI VCTCGAGB 1 cut(s) 1472
PstI CTGCAG 4 cut(s) 648, 796, 1290, 2111
PstNI CAGNNNCTG 2 cut(s) 1938, 2010
PsuI RGATCY 5 cut(s) 1173, 1492, 1754, 2227, 2458
PsyI GACNNNGTC 1 cut(s) 869
RsaI GTAC 3 cut(s) 1350, 1891, 2597
RsaNI GTAC 3 cut(s) 1349, 1890, 2596
SacII CCGCGG 1 cut(s) 1302
SapI GCTCTTC 1 cut(s) 721
SatI GCNGC 9 cut(s) 393, 396, 511, 795, 1283, 1286, 1454, 1925, 1939
ScaI AGTACT 1 cut(s) 1350
SchI GAGTC 4 cut(s) 797, 1397, 1577, 2176
ScrFI CCNGG 3 cut(s) 1724, 1759, 2415
SduI GDGCHC 2 cut(s) 1730, 2393
SfaNI GCATC 6 cut(s) 198, 367, 576, 1955, 2091, 2539
SfcI CTRYAG 5 cut(s) 644, 792, 1286, 1775, 2107
SfoI GGCGCC 1 cut(s) 143
Sfr274I CTCGAG 1 cut(s) 1472
Sfr303I CCGCGG 1 cut(s) 1302
SgrBI CCGCGG 1 cut(s) 1302
SlaI CTCGAG 1 cut(s) 1472
SmlI CTYRAG 7 cut(s) 733, 1025, 1402, 1472, 1550, 2053, 2315
SmoI CTYRAG 7 cut(s) 733, 1025, 1402, 1472, 1550, 2053, 2315
SsiI CCGC 3 cut(s) 1299, 1301, 2042
SspDI GGCGCC 1 cut(s) 141
SspI AATATT 2 cut(s) 1744, 1819
SspMI CTAG 8 cut(s) 531, 707, 743, 1043, 1463, 1622, 2126, 2571
StyD4I CCNGG 3 cut(s) 1722, 1757, 2413
StyI CCWWGG 1 cut(s) 555
TaaI ACNGT 7 cut(s) 30, 94, 640, 721, 2012, 2194, 2401
TaiI ACGT 6 cut(s) 75, 1140, 1206, 1546, 1842, 2339
TaqI TCGA 2 cut(s) 1473, 2444
TatI WGTACW 2 cut(s) 1348, 2595
TscAI CASTG 3 cut(s) 625, 1372, 2197
TseFI GTSAC 3 cut(s) 715, 1133, 1544
TseI GCWGC 9 cut(s) 392, 395, 510, 794, 1282, 1285, 1453, 1924, 1938
Tsp45I GTSAC 3 cut(s) 715, 1133, 1544
TspDTI ATGAA 9 cut(s) 36, 123, 177, 233, 508, 615, 819, 864, 1692
TspGWI ACGGA 1 cut(s) 433
TspRI CASTG 3 cut(s) 625, 1372, 2197
Tth111I GACNNNGTC 1 cut(s) 869
Van91I CCANNNNNTGG 1 cut(s) 2565
Vha464I CTTAAG 3 cut(s) 1025, 1550, 2315
XapI RAATTY 8 cut(s) 313, 483, 657, 689, 1179, 1371, 1408, 2065
XbaI TCTAGA 2 cut(s) 1462, 1621
XhoI CTCGAG 1 cut(s) 1472
XmiI GTMKAC 1 cut(s) 2333
XspI CTAG 8 cut(s) 531, 707, 743, 1043, 1463, 1622, 2126, 2571
ZrmI AGTACT 1 cut(s) 1350
Zsp2I ATGCAT 1 cut(s) 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.