Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001792.1

Orthogroup ID

OG0013738

Physical Location & Seq

Genomic Coordinates Forward (+)

42678 .. 47411

Gene Structure 4734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001792.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3312 bp

atggtaccatgttttttcttcatttttcttgttctgccatctaagtctgcatttccttgtgaggattccagtgattgcaaaactctgctcaaattcaaggaggagctgacaagtgatcccgaaggtcatcttcaaacttggaacgaagccaatcccttctgctactggactggaattacatgccaccaacgtctccaaaaccgggttataggccttgaactgatagatatgggcttgcaaggaaggatatcaccattcatatccaacctctctcttcttaccaacctgtctttacagagcaatgggttccatggacaaattccatcttccttgggattacttaaagagttggcatttctgaatgtaagctcaaacaagcttaaaggtagcattccaggctcattacatggttgccagagcttgaaagtcatagacttgaatgacaacaatctatctggtgttctccctaaagaactcggctggatgaagaatctaacatacttggctctctccttaaacaatctcagtggactgcttccagcctcactttcaaacttgacggaattgacaaaactacaactggccgtcaactattttactggaaagatcccaccagagcttggagcattaagaaagctagagattttgcatctccatacaaactatctcgaaggctcaatacctgcagtaattggtaactgcactgctttacgcgaaatctcgctgcttgagaatatgttaaatggagaaatcccttcagatatgttttctaaactcaagaatatgcagaaaatgtacatgtcaaacaacaagctttctgggagaattccagtgaccctcaccaatctttcacagctgatactgtttgatgttagtttgaataatttagagggagaagttcctgcaggattgggcaagctagagaaccttgagaatttctacttacataccaacaacttgggtggcggctctggtaattcttctctcagtttcttgactgctctaactaactgttcatatctgcaaaaactacacttgggttcgtgtttgttcactggaaatctaccatcttcaataggtgacctttcaaaagacctctattacttgaatctttttaataaccacattacaggaagtataccagatagaatcggaaacttaagcggcctggtaaccttgaacttgtcatacaaccgtttggaaggaaaaattccatcttctcttggcaggctttcgaatttgcagaggttatacttggggaacaacagaattattgggccaatgccaaaagacttggggatgatgcctaaccttggtttactagaatttggcaacaattcgattggtgggccaattccgccttcacttggtaatctctcacagctgagatatctttacctgtctagaaatcgcctatcaggaaagtttccgattgagcttactcaatgttctcttatcatgctgcttgatctgtctttcaacaacttaaaagggtctgttcctgtacagattgaccgtttttccaatttagctctctctcttaatctttcgaacaataacttcgaaggacagttgcctgcaagcattggaaagctggtatctgtactggcaattgacttgtctgacaaccagttttctgggtccatacctacattgatgggaagctgcatatctttggcgtatctaaacatgtccaacaacatatttgaggggactattccagagtcgttgaagctgatcactcaacttgaagttttggacttgtcacttaatcgattaaatggcagcattccaatctggattgctaaagcacagatgatcaagaatctcaatttatcttataacaggttatcaggagaaattccagacactgggaggataaaatctttcaatagaagctcattcttggggaatgtggggttgtgtggtggttctgcactacttggtcgtccgccatgcgtagttcaaaagagaaaatataagataagaaaatcgatactttactctttggttgcagcagttgcagtagtctgtgctctggttgctgtctttgtttattgtttcttcttcttcagaaaacgggattcaaaaccagaacaccgtgaacacagaatgctaagagtaatgggatcaccaagccatcatggaagtcgaattttcacccaaagggaacttgaaattgcaacaggtgagttcaatgaagctcatctcctgggtagagggaccttcggaacagtctataaagcaattgttgatgatggggatactattatggcagtgaaggttctacatggtgacagtattcagagttacaaaagcttcaagagggaatgtcaaatcatgtccgaaattaagcaccggaatcttgtaagaatggtaggatatacctggaacaaacagttcaaggctcttattctcgagtatattgacaatggtaacttagcacagcatctttatcctggtgaactggaggaaggagcatgtgaattatcgttgagggatagaatgtcaatagctatagatgttgccagtggcttggagtatcttcaggaaggttgtccagtccaaattatgcactgtgatctaaaaccagaaaatgtgcttattgacaacaatatggtggctcatgtagcagatttcgggattgggaagctcaacgcagctgagaaatccaacgaatcacatgttagcacaacacattttctacgtggatcaattggttacattcccccaggtatgcataatcacatcactagtttcacatctataaagtcgtggttaatagagtttacttgtattacagaatatggacaaggaattgaggtatcagcaaaaggagacatctatagctttggtgtcatggtgcttgagatgataacaagaagaagaccgacaagcaatatgtttccggatgggcttgatctaaggaagtgggtggtttcttcgttcccagaccatgtttgggatgttgttgacagtacattaaaggagatacaaagcacacatggcgctttggatgagcttgagaaatgctgcattcaaatgcttgatgtggggttgatgtgcacagaagagaatccacaagaaagacctgctatgtcttttgttgtgcagaagttgaaacaggcgataaggttgagggactggtcgcagatcgagactaaattggccggccggagttctgaagcgagtttagggatgtttccggtgagctttccattttgtttttggatgagacaacgccagctcgttcgccgccgacagcctcagagttcgtcgtcgtcgaattcagtccaggtaagctggacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009960 GO:0010154 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1103

Amino Acids

122.47

Weight (kDa)

8.35

Isoelectric Point (pI)

38.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013738)

Species	Orthologous Gene IDs
prunus_persica	Prupe.6G325600_v2.0.a1 Prupe.6G325700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0454791 RchiOBHm_Chr3g0454811
rosa_laevigata	RLG00000025405
rosa_multiflora	Rmu_co8436185.1_g000001 Rmu_sc0001792.1_g000012 Rmu_sc0001792.1_g000014 Rmu_sc0013126.1_g000007
rosa_roxburghii	Rroxscaffold_6G00424710
rosa_rugosa	Rorug03G0002500 Rorug03G0002700
rosa_samantha	Rh3AG062500 Rh3BG064400 Rh3CG063300 Rh3DG064400
rosa_wichuraiana	Rw3G004870 Rw3G004890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1842
Acc36I	ACCTGC	2 cut(s)	691, 3100
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	620, 1871
AccI	GTMKAC	1 cut(s)	1138
AccII	CGCG	1 cut(s)	714
AccIII	TCCGGA	1 cut(s)	2908
AciI	CCGC	5 cut(s)	966, 1164, 1358, 1952, 3256
AclWI	GGATC	4 cut(s)	110, 601, 2137, 2719
AcoI	YGGCCR	3 cut(s)	582, 3168, 3172
AcuI	CTGAAG	4 cut(s)	741, 2056, 2531, 3204
AfaI	GTAC	5 cut(s)	6, 797, 1506, 1605, 2980
AfiI	CCNNNNNNNGG	6 cut(s)	202, 620, 1313, 1367, 1871, 2962
AflII	CTTAAG	1 cut(s)	1159
AflIII	ACRYGT	3 cut(s)	798, 1689, 2683
AhlI	ACTAGT	1 cut(s)	2753
AjnI	CCWGG	7 cut(s)	394, 1167, 2211, 2387, 2458, 2731, 3294
AjuI	GAANNNNNNNTTGG	2 cut(s)	1345, 1377
Alw21I	GWGCWC	2 cut(s)	2038, 3068
Alw26I	GTCTC	4 cut(s)	197, 2832, 3152, 3229
Alw44I	GTGCAC	1 cut(s)	3064
AlwI	GGATC	4 cut(s)	110, 601, 2137, 2719
AlwNI	CAGNNNCTG	1 cut(s)	1871
Ama87I	CYCGRG	1 cut(s)	2417
Aor13HI	TCCGGA	1 cut(s)	2908
AoxI	GGCC	7 cut(s)	211, 582, 1165, 1277, 1349, 3168, 3172
ApaLI	GTGCAC	1 cut(s)	3064
ApeKI	GCWGC	7 cut(s)	724, 1462, 1665, 1785, 2015, 2660, 3033
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	1 cut(s)	3011
AspS9I	GGNCC	4 cut(s)	1277, 1349, 1641, 2223
AsuC2I	CCSGG	1 cut(s)	203
AsuHPI	GGTGA	9 cut(s)	243, 832, 1091, 2124, 2152, 2201, 2306, 2474, 3220
AsuII	TTCGAA	3 cut(s)	1235, 1550, 1563
AvaI	CYCGRG	1 cut(s)	2417
AvaII	GGWCC	2 cut(s)	1641, 2223
BaeGI	GKGCMC	1 cut(s)	3068
BanI	GGYRCC	1 cut(s)	4
BarI	GAAGNNNNNNTAC	2 cut(s)	663, 695
BbsI	GAAGAC	1 cut(s)	2893
Bbv12I	GWGCWC	2 cut(s)	2038, 3068
BbvI	GCAGC	7 cut(s)	711, 1449, 1652, 1797, 2027, 2672, 3020
BccI	CCATC	8 cut(s)	46, 331, 1075, 1222, 1651, 2148, 2252, 2906
BceAI	ACGGC	1 cut(s)	569
BciT130I	CCWGG	7 cut(s)	396, 1169, 2213, 2389, 2460, 2733, 3296
BciVI	GTATCC	1 cut(s)	2257
BclI	TGATCA	2 cut(s)	1737, 1818
BcnI	CCSGG	1 cut(s)	203
BcoDI	GTCTC	4 cut(s)	197, 2832, 3152, 3229
BcuI	ACTAGT	1 cut(s)	2753
BfaI	CTAG	5 cut(s)	638, 920, 1322, 1404, 2754
BfmI	CTRYAG	4 cut(s)	684, 903, 2517, 2845
BfoI	RGCGCY	1 cut(s)	3012
BfrI	CTTAAG	1 cut(s)	1159
BfuAI	ACCTGC	2 cut(s)	691, 3100
BfuI	GTATCC	1 cut(s)	2257
Bme1390I	CCNGG	8 cut(s)	203, 396, 1169, 2213, 2389, 2460, 2733, 3296
Bme18I	GGWCC	2 cut(s)	1641, 2223
BmeT110I	CYCGRG	1 cut(s)	2417
BmgT120I	GGNCC	4 cut(s)	1277, 1349, 1641, 2223
BmiI	GGNNCC	4 cut(s)	6, 308, 1642, 2224
BmrFI	CCNGG	8 cut(s)	203, 396, 1169, 2213, 2389, 2460, 2733, 3296
BmrI	ACTGGG	1 cut(s)	1881
BmsI	GCATC	3 cut(s)	658, 1293, 2458
BmuI	ACTGGG	1 cut(s)	1881
BpiI	GAAGAC	1 cut(s)	2893
BpmI	CTGGAG	1 cut(s)	2489
Bpu14I	TTCGAA	3 cut(s)	1235, 1550, 1563
BpuEI	CTTGAG	5 cut(s)	749, 761, 950, 2888, 3044
BpuMI	CCSGG	1 cut(s)	203
Bsa29I	ATCGAT	2 cut(s)	1774, 1994
BsaAI	YACGTR	1 cut(s)	2708
BsaJI	CCNNGG	5 cut(s)	310, 330, 1312, 2212, 2731
BsaWI	WCCGGW	3 cut(s)	2358, 2908, 3205
Bsc4I	CCNNNNNNNGG	6 cut(s)	202, 620, 1313, 1367, 1871, 2962
Bse118I	RCCGGY	1 cut(s)	3170
Bse3DI	GCAATG	1 cut(s)	307
BseAI	TCCGGA	1 cut(s)	2908
BseBI	CCWGG	7 cut(s)	396, 1169, 2213, 2389, 2460, 2733, 3296
BseCI	ATCGAT	2 cut(s)	1774, 1994
BseDI	CCNNGG	5 cut(s)	310, 330, 1312, 2212, 2731
BseGI	GGATG	7 cut(s)	489, 1305, 2917, 2971, 3022, 3204, 3237
BseLI	CCNNNNNNNGG	6 cut(s)	202, 620, 1313, 1367, 1871, 2962
BseMI	GCAATG	1 cut(s)	307
BseMII	CTCAG	5 cut(s)	538, 1000, 1376, 2655, 3281
BseRI	GAGGAG	1 cut(s)	116
BseSI	GKGCMC	1 cut(s)	3068
BseX3I	CGGCCG	1 cut(s)	3172
BseXI	GCAGC	7 cut(s)	711, 1449, 1652, 1797, 2027, 2672, 3020
BsgI	GTGCAG	3 cut(s)	685, 1920, 3131
Bsh1236I	CGCG	1 cut(s)	714
Bsh1285I	CGRYCG	1 cut(s)	3175
BshFI	GGCC	7 cut(s)	213, 584, 1167, 1279, 1351, 3170, 3174
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	1774, 1994
BsiEI	CGRYCG	1 cut(s)	3175
BsiHKAI	GWGCWC	2 cut(s)	2038, 3068
BsiHKCI	CYCGRG	1 cut(s)	2417
BsiSI	CCGG	6 cut(s)	202, 2359, 2909, 3171, 3175, 3206
BslFI	GGGAC	3 cut(s)	1726, 2236, 3155
BslI	CCNNNNNNNGG	6 cut(s)	202, 620, 1313, 1367, 1871, 2962
BsmAI	GTCTC	4 cut(s)	197, 2832, 3152, 3229
BsmBI	CGTCTC	1 cut(s)	197
BsmFI	GGGAC	3 cut(s)	1726, 2236, 3155
BsmI	GAATGC	4 cut(s)	390, 1788, 2118, 3036
BsnI	GGCC	7 cut(s)	213, 584, 1167, 1279, 1351, 3170, 3174
BsoBI	CYCGRG	1 cut(s)	2417
Bsp119I	TTCGAA	3 cut(s)	1235, 1550, 1563
Bsp1286I	GDGCHC	2 cut(s)	2038, 3068
Bsp13I	TCCGGA	1 cut(s)	2908
Bsp1407I	TGTACA	2 cut(s)	795, 1504
Bsp19I	CCATGG	1 cut(s)	310
BspACI	CCGC	5 cut(s)	966, 1164, 1358, 1952, 3256
BspANI	GGCC	7 cut(s)	213, 584, 1167, 1279, 1351, 3170, 3174
BspCNI	CTCAG	5 cut(s)	537, 999, 1377, 2656, 3280
BspDI	ATCGAT	2 cut(s)	1774, 1994
BspEI	TCCGGA	1 cut(s)	2908
BspFNI	CGCG	1 cut(s)	714
BspLI	GGNNCC	4 cut(s)	6, 308, 1642, 2224
BspMAI	CTGCAG	2 cut(s)	688, 907
BspMI	ACCTGC	2 cut(s)	691, 3100
BspPI	GGATC	4 cut(s)	110, 601, 2137, 2719
BspT104I	TTCGAA	3 cut(s)	1235, 1550, 1563
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	1159
BsrDI	GCAATG	1 cut(s)	307
BsrFI	RCCGGY	1 cut(s)	3170
BsrGI	TGTACA	2 cut(s)	795, 1504
BssAI	RCCGGY	1 cut(s)	3170
BssECI	CCNNGG	5 cut(s)	310, 330, 1312, 2212, 2731
BssNAI	GTATAC	1 cut(s)	1139
BssT1I	CCWWGG	3 cut(s)	310, 330, 1312
Bst1107I	GTATAC	1 cut(s)	1139
Bst2UI	CCWGG	7 cut(s)	396, 1169, 2213, 2389, 2460, 2733, 3296
Bst6I	CTCTTC	2 cut(s)	279, 3066
BstAFI	CTTAAG	1 cut(s)	1159
BstAPI	GCANNNNNTGC	1 cut(s)	2021
BstAUI	TGTACA	2 cut(s)	795, 1504
BstBAI	YACGTR	1 cut(s)	2708
BstBI	TTCGAA	3 cut(s)	1235, 1550, 1563
BstC8I	GCNNGC	7 cut(s)	236, 917, 1229, 1578, 1582, 3172, 3245
BstDEI	CTNAG	9 cut(s)	42, 524, 986, 1385, 2117, 2440, 2664, 2924, 3267
BstDSI	CCRYGG	1 cut(s)	310
BstEII	GGTNACC	2 cut(s)	1079, 1171
BstF5I	GGATG	7 cut(s)	489, 1305, 2917, 2971, 3022, 3204, 3237
BstFNI	CGCG	1 cut(s)	714
BstH2I	RGCGCY	1 cut(s)	3012
BstHHI	GCGC	1 cut(s)	3011
BstMAI	GTCTC	4 cut(s)	197, 2832, 3152, 3229
BstMCI	CGRYCG	1 cut(s)	3175
BstMWI	GCNNNNNNNGC	6 cut(s)	396, 1357, 2021, 2042, 2630, 3006
BstNI	CCWGG	7 cut(s)	396, 1169, 2213, 2389, 2460, 2733, 3296
BstNSI	RCATGY	5 cut(s)	183, 802, 1693, 2484, 2687
BstPI	GGTNACC	2 cut(s)	1079, 1171
BstSCI	CCNGG	8 cut(s)	201, 394, 1167, 2211, 2387, 2458, 2731, 3294
BstSFI	CTRYAG	4 cut(s)	684, 903, 2517, 2845
BstSLI	GKGCMC	1 cut(s)	3068
BstUI	CGCG	1 cut(s)	714
BstV1I	GCAGC	7 cut(s)	711, 1449, 1652, 1797, 2027, 2672, 3020
BstV2I	GAAGAC	1 cut(s)	2893
BstX2I	RGATCY	1 cut(s)	606
BstXI	CCANNNNNNTGG	3 cut(s)	958, 1637, 2536
BstYI	RGATCY	1 cut(s)	606
BstZ17I	GTATAC	1 cut(s)	1139
BstZI	CGGCCG	1 cut(s)	3172
Bsu15I	ATCGAT	2 cut(s)	1774, 1994
BsuI	GTATCC	1 cut(s)	2257
BsuRI	GGCC	7 cut(s)	213, 584, 1167, 1279, 1351, 3170, 3174
BsuTUI	ATCGAT	2 cut(s)	1774, 1994
BtgI	CCRYGG	1 cut(s)	310
BtsCI	GGATG	7 cut(s)	489, 1305, 2917, 2971, 3022, 3204, 3237
BtsI	GCAGTG	2 cut(s)	702, 2283
BtsIMutI	CAGTG	9 cut(s)	76, 532, 702, 837, 1053, 1869, 2283, 2536, 2575
BveI	ACCTGC	2 cut(s)	691, 3100
Cac8I	GCNNGC	7 cut(s)	236, 917, 1229, 1578, 1582, 3172, 3245
CaiI	CAGNNNCTG	1 cut(s)	1871
CfoI	GCGC	1 cut(s)	3011
Cfr10I	RCCGGY	1 cut(s)	3170
Cfr13I	GGNCC	4 cut(s)	1277, 1349, 1641, 2223
ClaI	ATCGAT	2 cut(s)	1774, 1994
Csp6I	GTAC	5 cut(s)	5, 796, 1505, 1604, 2979
CspCI	CAANNNNNGTGG	4 cut(s)	508, 543, 943, 978
CviQI	GTAC	5 cut(s)	5, 796, 1505, 1604, 2979
DdeI	CTNAG	9 cut(s)	42, 524, 986, 1385, 2117, 2440, 2664, 2924, 3267
EaeI	YGGCCR	3 cut(s)	582, 3168, 3172
EagI	CGGCCG	1 cut(s)	3172
Eam1104I	CTCTTC	2 cut(s)	279, 3066
EarI	CTCTTC	2 cut(s)	279, 3066
EciI	GGCGGA	2 cut(s)	1347, 1941
EclXI	CGGCCG	1 cut(s)	3172
Eco130I	CCWWGG	3 cut(s)	310, 330, 1312
Eco147I	AGGCCT	1 cut(s)	213
Eco32I	GATATC	2 cut(s)	249, 1391
Eco47I	GGWCC	2 cut(s)	1641, 2223
Eco52I	CGGCCG	1 cut(s)	3172
Eco57I	CTGAAG	4 cut(s)	741, 2056, 2531, 3204
Eco88I	CYCGRG	1 cut(s)	2417
Eco91I	GGTNACC	2 cut(s)	1079, 1171
EcoO109I	RGGNCCY	1 cut(s)	2223
EcoO65I	GGTNACC	2 cut(s)	1079, 1171
EcoRI	GAATTC	2 cut(s)	825, 3286
EcoRII	CCWGG	7 cut(s)	394, 1167, 2211, 2387, 2458, 2731, 3294
EcoRV	GATATC	2 cut(s)	249, 1391
EcoT14I	CCWWGG	3 cut(s)	310, 330, 1312
EcoT22I	ATGCAT	1 cut(s)	2742
ErhI	CCWWGG	3 cut(s)	310, 330, 1312
Esp3I	CGTCTC	1 cut(s)	197
FalI	AAGNNNNNCTT	3 cut(s)	114, 146, 3292
FaqI	GGGAC	3 cut(s)	1726, 2236, 3155
FbaI	TGATCA	2 cut(s)	1737, 1818
FblI	GTMKAC	1 cut(s)	1138
FokI	GGATG	7 cut(s)	496, 1312, 2924, 2978, 3029, 3211, 3244
FseI	GGCCGGCC	1 cut(s)	3174
FspBI	CTAG	5 cut(s)	638, 920, 1322, 1404, 2754
GlaI	GCGC	1 cut(s)	3010
GsuI	CTGGAG	1 cut(s)	2489
HaeII	RGCGCY	1 cut(s)	3012
HaeIII	GGCC	7 cut(s)	213, 584, 1167, 1279, 1351, 3170, 3174
HapII	CCGG	6 cut(s)	202, 2359, 2909, 3171, 3175, 3206
HhaI	GCGC	1 cut(s)	3011
Hin6I	GCGC	1 cut(s)	3009
HinP1I	GCGC	1 cut(s)	3009
HincII	GTYRAC	2 cut(s)	589, 2974
HindII	GTYRAC	2 cut(s)	589, 2974
HindIII	AAGCTT	3 cut(s)	377, 812, 2317
HpaII	CCGG	6 cut(s)	202, 2359, 2909, 3171, 3175, 3206
HphI	GGTGA	9 cut(s)	243, 832, 1091, 2124, 2152, 2201, 2306, 2474, 3220
Hpy99I	CGWCG	3 cut(s)	3280, 3283, 3286
HpyCH4IV	ACGT	2 cut(s)	190, 2707
HpyF10VI	GCNNNNNNNGC	6 cut(s)	396, 1357, 2021, 2042, 2630, 3006
HpyF3I	CTNAG	9 cut(s)	42, 524, 986, 1385, 2117, 2440, 2664, 2924, 3267
HpySE526I	ACGT	2 cut(s)	190, 2707
HspAI	GCGC	1 cut(s)	3009
Kpn2I	TCCGGA	1 cut(s)	2908
KpnI	GGTACC	1 cut(s)	8
KroI	GCCGGC	1 cut(s)	3170
KroNI	GCCGGC	1 cut(s)	3172
Ksp22I	TGATCA	2 cut(s)	1737, 1818
LmnI	GCTCC	3 cut(s)	103, 623, 2477
Lsp1109I	GCAGC	7 cut(s)	711, 1449, 1652, 1797, 2027, 2672, 3020
LweI	GCATC	3 cut(s)	658, 1293, 2458
MaeI	CTAG	5 cut(s)	638, 920, 1322, 1404, 2754
MaeII	ACGT	2 cut(s)	190, 2707
MaeIII	GTNAC	9 cut(s)	695, 832, 1079, 1171, 1764, 2294, 2309, 2435, 2720
MfeI	CAATTG	3 cut(s)	1611, 2247, 2715
MflI	RGATCY	1 cut(s)	606
MhlI	GDGCHC	2 cut(s)	2038, 3068
MlyI	GAGTC	1 cut(s)	1733
MmeI	TCCRAC	3 cut(s)	288, 1719, 2697
Mph1103I	ATGCAT	1 cut(s)	2742
MroI	TCCGGA	1 cut(s)	2908
MroNI	GCCGGC	1 cut(s)	3170
MslI	CAYNNNNRTG	1 cut(s)	3041
MspA1I	CMGCKG	3 cut(s)	856, 1384, 2663
MspCI	CTTAAG	1 cut(s)	1159
MspI	CCGG	6 cut(s)	202, 2359, 2909, 3171, 3175, 3206
MspR9I	CCNGG	8 cut(s)	203, 396, 1169, 2213, 2389, 2460, 2733, 3296
MunI	CAATTG	3 cut(s)	1611, 2247, 2715
Mva1269I	GAATGC	4 cut(s)	390, 1788, 2118, 3036
MvaI	CCWGG	7 cut(s)	396, 1169, 2213, 2389, 2460, 2733, 3296
MvnI	CGCG	1 cut(s)	714
MwoI	GCNNNNNNNGC	6 cut(s)	396, 1357, 2021, 2042, 2630, 3006
NaeI	GCCGGC	1 cut(s)	3172
NciI	CCSGG	1 cut(s)	203
NcoI	CCATGG	1 cut(s)	310
NgoMIV	GCCGGC	1 cut(s)	3170
NlaIV	GGNNCC	4 cut(s)	6, 308, 1642, 2224
NmeAIII	GCCGAG	1 cut(s)	456
NmuCI	GTSAC	4 cut(s)	832, 1079, 1764, 2294
NsiI	ATGCAT	1 cut(s)	2742
NspI	RCATGY	5 cut(s)	183, 802, 1693, 2484, 2687
NspV	TTCGAA	3 cut(s)	1235, 1550, 1563
PaeR7I	CTCGAG	1 cut(s)	2417
PceI	AGGCCT	1 cut(s)	213
PciI	ACATGT	3 cut(s)	798, 1689, 2683
PcsI	WCGNNNNNNNCGW	1 cut(s)	3281
PctI	GAATGC	4 cut(s)	390, 1788, 2118, 3036
PdiI	GCCGGC	1 cut(s)	3172
PfeI	GAWTC	9 cut(s)	65, 490, 1108, 1149, 1825, 2084, 2362, 2678, 3076
PflMI	CCANNNNNTGG	2 cut(s)	620, 1871
PleI	GAGTC	1 cut(s)	1732
PpsI	GAGTC	1 cut(s)	1732
Ppu21I	YACGTR	1 cut(s)	2708
PpuMI	RGGWCCY	1 cut(s)	2223
PscI	ACATGT	3 cut(s)	798, 1689, 2683
PsiI	TTATAA	1 cut(s)	1842
Psp5II	RGGWCCY	1 cut(s)	2223
Psp6I	CCWGG	7 cut(s)	394, 1167, 2211, 2387, 2458, 2731, 3294
PspEI	GGTNACC	2 cut(s)	1079, 1171
PspGI	CCWGG	7 cut(s)	394, 1167, 2211, 2387, 2458, 2731, 3294
PspN4I	GGNNCC	4 cut(s)	6, 308, 1642, 2224
PspPI	GGNCC	4 cut(s)	1277, 1349, 1641, 2223
PspPPI	RGGWCCY	1 cut(s)	2223
PsrI	GAACNNNNNNTAC	2 cut(s)	1172, 1204
PstI	CTGCAG	2 cut(s)	688, 907
PstNI	CAGNNNCTG	1 cut(s)	1871
PsuI	RGATCY	1 cut(s)	606
PvuII	CAGCTG	3 cut(s)	856, 1384, 2663
RigI	GGCCGGCC	1 cut(s)	3174
RsaI	GTAC	5 cut(s)	6, 797, 1506, 1605, 2980
RsaNI	GTAC	5 cut(s)	5, 796, 1505, 1604, 2979
RseI	CAYNNNNRTG	1 cut(s)	3041
Sau96I	GGNCC	4 cut(s)	1277, 1349, 1641, 2223
SbfI	CCTGCAGG	1 cut(s)	907
SchI	GAGTC	1 cut(s)	1733
ScrFI	CCNGG	8 cut(s)	203, 396, 1169, 2213, 2389, 2460, 2733, 3296
SdaI	CCTGCAGG	1 cut(s)	907
SduI	GDGCHC	2 cut(s)	2038, 3068
SfaNI	GCATC	3 cut(s)	658, 1293, 2458
SfcI	CTRYAG	4 cut(s)	684, 903, 2517, 2845
Sfr274I	CTCGAG	1 cut(s)	2417
SfuI	TTCGAA	3 cut(s)	1235, 1550, 1563
SinI	GGWCC	2 cut(s)	1641, 2223
SlaI	CTCGAG	1 cut(s)	2417
SmiMI	CAYNNNNRTG	1 cut(s)	3041
SmlI	CTYRAG	7 cut(s)	728, 776, 929, 1159, 2417, 2867, 3023
SmoI	CTYRAG	7 cut(s)	728, 776, 929, 1159, 2417, 2867, 3023
SpeI	ACTAGT	1 cut(s)	2753
Sse8387I	CCTGCAGG	1 cut(s)	907
SseBI	AGGCCT	1 cut(s)	213
SsiI	CCGC	5 cut(s)	966, 1164, 1358, 1952, 3256
SspMI	CTAG	5 cut(s)	638, 920, 1322, 1404, 2754
StuI	AGGCCT	1 cut(s)	213
StyD4I	CCNGG	8 cut(s)	201, 394, 1167, 2211, 2387, 2458, 2731, 3294
StyI	CCWWGG	3 cut(s)	310, 330, 1312
TaiI	ACGT	2 cut(s)	193, 2710
TaqII	GACCGA	1 cut(s)	2905
TatI	WGTACW	4 cut(s)	795, 1504, 1603, 2978
TauI	GCSGC	3 cut(s)	969, 1167, 3258
TfiI	GAWTC	9 cut(s)	65, 490, 1108, 1149, 1825, 2084, 2362, 2678, 3076
TscAI	CASTG	9 cut(s)	76, 532, 709, 837, 1060, 1876, 2283, 2536, 2582
TseFI	GTSAC	4 cut(s)	832, 1079, 1764, 2294
TseI	GCWGC	7 cut(s)	724, 1462, 1665, 1785, 2015, 2660, 3033
Tsp45I	GTSAC	4 cut(s)	832, 1079, 1764, 2294
TspDTI	ATGAA	5 cut(s)	10, 247, 500, 1005, 2214
TspGWI	ACGGA	1 cut(s)	575
TspRI	CASTG	9 cut(s)	76, 532, 709, 837, 1060, 1876, 2283, 2536, 2582
Van91I	CCANNNNNTGG	2 cut(s)	620, 1871
Vha464I	CTTAAG	1 cut(s)	1159
VneI	GTGCAC	1 cut(s)	3064
VpaK11BI	GGWCC	2 cut(s)	1641, 2223
XbaI	TCTAGA	1 cut(s)	1403
XceI	RCATGY	5 cut(s)	183, 802, 1693, 2484, 2687
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2958, 3225
XhoI	CTCGAG	1 cut(s)	2417
XmiI	GTMKAC	1 cut(s)	1138
XspI	CTAG	5 cut(s)	638, 920, 1322, 1404, 2754
Zsp2I	ATGCAT	1 cut(s)	2742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.